HG10005522 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005522
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	HTH myb-type domain-containing protein
Location	Chr07: 3296495 .. 3300365 (-)
RNA-Seq Expression	HG10005522
Synteny	HG10005522

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGATCAAGAATCGCCGCGGCGGAAGGCCCAAGCCTTCCCTGCGTTCCGCTGCTTCTTATCCGTCGCCTATGGCGTCTCCGCCCTTTCCCGTCCAGGTTCGTATTCTCTTCTCTTTCCTTATAGAAATGAAGCCATTTCCTTTTTCTTCTCGCAAACCTACGTTGTTTCATTGCGCTATTGCTTTTCGTGACTGAAACTGTGATCCACGATGACACCATTTGTTACTTTCTTGGAATTTTCTGAGAACACGTTGATAGACTAATTTTTAGTTTCAACTAGATTTTGTTCTTTACAAATTCGAAGAAAGGGAAGAGATTGTTTGTTGAAAGTTTCTTTGCTGAAAAATTGATGGGTTTGTATCTGGTTAGGATGTGCCGAATGCAGAAGACAATACTTTGCATGAGGCATCAAGTAAGGAAACTAACGATGTGTTGGATAAGATAGATTGCTTTCAGAAAGACACTTGTACTAGATGCGACCAGAGTGGGGACTTATTGGTTTGTAATGAAATTGGGTGTCCAATTGCCCTTCATGAGTTATGTATGTCCTGTGAGCCTTCCTTCGATGAAGATGGACGATTCTATTGTCCTTATTGTTCATATAAAAGGGCTTTACTTCGTGTGAATGAGTTGAGGAGAAAGACTATGGTGGCAAAGAGAGCGTTATCTGATTTCATCGATACCAGGATGGTTGGTGGTGGAAATTCGCCACAGATAGGAGAGGCAGGTAAGAAGAAAGCAGATGATGTCTTGACTTGTGGAGTGGATTTGGACCTGCCTAATCATGGGAGTCATTTGGGCAATGAGAGTTCGGGAGATCAGGATATGCAGGTCGAGCAAAATCAGAGTAATGAAGGGGAGGACCGTGTGAGAACAGAAGGAGATGTTCAACCAACGTCAATGGTGGGGGTTAACAGCGATAATCATGATGGTCCTATTGTGTCTAATGTTAGCAACGGCAGTCATTCAACTCCTGTAGTTCAGCCATGTGAGGATTCTATGAATGAAGAAACTCATGAGGCTGATGGAACACATCAGGTTGAAAGTTTAGAAAATAAAGAAGATGGGAAAACGATGAACGAAGAAAACTTAAGGTCTACAGATGACATTCAGGATGATGAGATTGCAAAGGATCAAGGACAACTGGAGACTCCAGGTGCACATCATGATGAGGAAGAGACTGCTCGAGAACCTCAAGACAAAGCTGATGGTGGAGAAAAAATCCAAACTGACAACAAAAGGATGCTCGAAGATATCGTTCTTGCATCTGGAAATAAGGATTTGAAGAATGAAACAATTGTGAAAAAAAAGCGCTTTAAAACTAAAGCTAATAGGAGAACAGACTTACAGAATGTCAATTCTCCTAGAAAGTCATTGCGTCTACAAACTCCAGATCCTGGCAAAAAGTCCCCTCATATACAAACTCCAGAACCTAGGAAAAAGTCACCTCATTTACAAACTCCAAAACCTTGGAAAGATCATGCAACCAAAATTGAGGAAGTTTCTGTATCCAGGAATTTAAAGCTGCAACCAGCATCTCCTAGTCAATTGTAAGTTCTTTCAAGGCTATCATTCAATTTCTATATTACTGGATTGCAGTACATTGGTGGGCATCTTTCAGCAGTTTCTGATCATCAAAAGTAATTACAACTAACCGTCCTTTCCCAATTTGCAGCAAAAACTTGGATTTTCATAGTGGGAAGCGTAAGAGAATGCGTTGGTCTGTTGAAGAGGAGGAAATGTTGAAGGTATCTAGTTGATTAGTTGATCAATTAAGATGTTTTGGGCTTGGCATCTTTAATTTTTCCAGTTGTTGTTGGTTTTTCTTTTCCTTCAAATCTTGGTCGCAAAATAATTAGATCATGCAGAAGGGAAGAAAAAGATAATAAAATGAAATCATGGAATAAGCATAACAATCTCTTGTAACTACCACCATTTGCTTAATATTGAAATAACAATAAAACATACTAGTCTTGCAGTGATAGTATGAAATATTACATTTGCTTAATATTGAAATAACAATAAAACATACTAGTCTTGCAGTGATAGTATGAAATATTACAAAAGGGGGAGAAAAATCACACCCCTATGAGGATATGCTTATATTTTAACGCATCTGTCGTGATTCTTAGGATGGAAAACTGAGTTTACATCTGAGTGTTAGCAAAGCTGGTTGAAATGACCTACTGTGTAGATAAGTTTTATTATGATTTCTCTTACATTCTTTTTAACTGAAAAATCCAGGTAGTGTTGCATATAATACTTAAAAGGATTCTCAAGTTCATGCTGCTTCATTTTTAGTTGGCACTCAATTCATTTGTGTCATTTACTTATATCTGTGAACCCTTCATCAAATTTGCATTGAAGATACAGTTGATTGTGCTTTCCGCTCTTTTTTTACCCCTTTAACCATTATTGTCTTTCTTCTCTAATCCCTAGTTGGAGATCTTCCAATGTAACTCACCTTATGGTGTCTGGGAGTCTATTAGTTCCCTTCATTTCATTCATCAATGAAATTGTTTCTCATCTCAGAAAAGGAATATATGTTGTGTGTGACCCGTTTATCTTCTTTAGTGGAGCTAAAAACTAACCAATATTGGTCATGAGAAGAAATGGCCCAATACTACGTTTTTTTTTTCTTAATCATTACTTGCTTCTCCCTGTGCTTACTGAAATTACTTTTTCAGGAAGGAGTTCAGAAATTCTCTTCTACAGCAAATAAAAATCTACCTTGGAGGAAAATTTTGGAATTTGGTCGTCACATATTTGATAACACACGTACTCCAGTTGACCTGAAAGATAAATGGAGAAACCTCCTAGCCAAATAGTCTGCTCAATGGATAACTAGTCCAAAAGATTGCAAAAAGGTAACTTCAATAGTGTCAATAGCAAGTTTTTGGTAACTCCTAAACCTTAATAACAAGTTTATGAAAATTTTGGAATTCGGTCGTCACATATATTTGATGACACTCTTACTCCAGTTAATTTGAAAGATAAATGGAGAAACGTTCTAGCCATATAGTCTATTTTGCTTACTATCCTTATATGTGCTCGAAGTTCAGTATGAACGTATAACTCGATGTTTTGCATTTGCACGATCCAACGATCCACCCCTTAGAAAATTAATAGGTTTAATTTGGTTATCATACTTTCAAAATACTTATTTTGGTTCATGTAGTTTCTGTTTTTGTTATTTTGTTATATTTTGAAATGATCACTTTAGTCCTTGTTTTTAAATTTAAACAAAAAGTCTATGTACATGATACAATAAAATCTGTAACAATATCTTAAGAAATTTTTGTAGGGTAGTGTTTGTTGAATTTGTGATAGGAAAAATGAGACAGTAAACAAATGGACCAAAACAATCATTTCTTTTATAAAGTATAGGGATCAATAAATGTTTCAAAAGTATGGAGACTTAAATTAAACAAAAGTTTAAATTACAAAATCAAGATTAGATGTTTAAAAGGTACAAGGGCTAGAATAAGATTTGAACCGAATGAAATGTGTCAGAGTTTATTTGAAATTTCTTTTTAAGTGCTTAAAAGTATTTTTTTTTCACCCAAAAGTACTTTTTTAAAAAATTATATATTTAAAAGTTCATTTCAAACAAGCTCTTAGTCTGAAAAGAATTTAAACCACATTTTTCGCAGGTACGTTCATGACGCGGAGCCATTCTGTTGATGAAGAAATCTACCTGCTAAAAGAGAGAGGAAAGAAGAAAAAGGGAATGCACAAACAGTTTGTCTTGAAGACTCTGATTTGTAATGGAAGCTATAGAAGCTATTCTAGAGATAAGGTTGATGAAGGCTGTACAGCTCCTTTTGTTGGTCTGTTAATGATGGGCAGTTGGGGAAGAACACTATGA

mRNA sequence

ATGAGGATCAAGAATCGCCGCGGCGGAAGGCCCAAGCCTTCCCTGCGTTCCGCTGCTTCTTATCCGTCGCCTATGGCGTCTCCGCCCTTTCCCGTCCAGGATGTGCCGAATGCAGAAGACAATACTTTGCATGAGGCATCAAGTAAGGAAACTAACGATGTGTTGGATAAGATAGATTGCTTTCAGAAAGACACTTGTACTAGATGCGACCAGAGTGGGGACTTATTGGTTTGTAATGAAATTGGGTGTCCAATTGCCCTTCATGAGTTATGTATGTCCTGTGAGCCTTCCTTCGATGAAGATGGACGATTCTATTGTCCTTATTGTTCATATAAAAGGGCTTTACTTCGTGTGAATGAGTTGAGGAGAAAGACTATGGTGGCAAAGAGAGCGTTATCTGATTTCATCGATACCAGGATGGTTGGTGGTGGAAATTCGCCACAGATAGGAGAGGCAGGTAAGAAGAAAGCAGATGATGTCTTGACTTGTGGAGTGGATTTGGACCTGCCTAATCATGGGAGTCATTTGGGCAATGAGAGTTCGGGAGATCAGGATATGCAGGTCGAGCAAAATCAGAGTAATGAAGGGGAGGACCGTGTGAGAACAGAAGGAGATGTTCAACCAACGTCAATGGTGGGGGTTAACAGCGATAATCATGATGGTCCTATTGTGTCTAATGTTAGCAACGGCAGTCATTCAACTCCTGTAGTTCAGCCATGTGAGGATTCTATGAATGAAGAAACTCATGAGGCTGATGGAACACATCAGGTTGAAAGTTTAGAAAATAAAGAAGATGGGAAAACGATGAACGAAGAAAACTTAAGGTCTACAGATGACATTCAGGATGATGAGATTGCAAAGGATCAAGGACAACTGGAGACTCCAGGTGCACATCATGATGAGGAAGAGACTGCTCGAGAACCTCAAGACAAAGCTGATGGTGGAGAAAAAATCCAAACTGACAACAAAAGGATGCTCGAAGATATCGTTCTTGCATCTGGAAATAAGGATTTGAAGAATGAAACAATTGTGAAAAAAAAGCGCTTTAAAACTAAAGCTAATAGGAGAACAGACTTACAGAATGTCAATTCTCCTAGAAAGTCATTGCGTCTACAAACTCCAGATCCTGGCAAAAAGTCCCCTCATATACAAACTCCAGAACCTAGGAAAAAGTCACCTCATTTACAAACTCCAAAACCTTGGAAAGATCATGCAACCAAAATTGAGGAAGTTTCTGTATCCAGGAATTTAAAGCTGCAACCAGCATCTCCTAGTCAATTCAAAAACTTGGATTTTCATAGTGGGAAGCGTAAGAGAATGCGTTGGTCTGTTGAAGAGGAGGAAATGTTGAAGGAAGGAGTTCAGAAATTCTCTTCTACAGCAAATAAAAATCTACCTTGGAGGAAAATTTTGGAATTTGGTCGTCACATATTTGATAACACACGTACGTTCATGACGCGGAGCCATTCTGTTGATGAAGAAATCTACCTGCTAAAAGAGAGAGGAAAGAAGAAAAAGGGAATGCACAAACAGTTTGTCTTGAAGACTCTGATTTGTAATGGAAGCTATAGAAGCTATTCTAGAGATAAGGTTGATGAAGGCTGTACAGCTCCTTTTGTTGGTCTGTTAATGATGGGCAGTTGGGGAAGAACACTATGA

Coding sequence (CDS)

ATGAGGATCAAGAATCGCCGCGGCGGAAGGCCCAAGCCTTCCCTGCGTTCCGCTGCTTCTTATCCGTCGCCTATGGCGTCTCCGCCCTTTCCCGTCCAGGATGTGCCGAATGCAGAAGACAATACTTTGCATGAGGCATCAAGTAAGGAAACTAACGATGTGTTGGATAAGATAGATTGCTTTCAGAAAGACACTTGTACTAGATGCGACCAGAGTGGGGACTTATTGGTTTGTAATGAAATTGGGTGTCCAATTGCCCTTCATGAGTTATGTATGTCCTGTGAGCCTTCCTTCGATGAAGATGGACGATTCTATTGTCCTTATTGTTCATATAAAAGGGCTTTACTTCGTGTGAATGAGTTGAGGAGAAAGACTATGGTGGCAAAGAGAGCGTTATCTGATTTCATCGATACCAGGATGGTTGGTGGTGGAAATTCGCCACAGATAGGAGAGGCAGGTAAGAAGAAAGCAGATGATGTCTTGACTTGTGGAGTGGATTTGGACCTGCCTAATCATGGGAGTCATTTGGGCAATGAGAGTTCGGGAGATCAGGATATGCAGGTCGAGCAAAATCAGAGTAATGAAGGGGAGGACCGTGTGAGAACAGAAGGAGATGTTCAACCAACGTCAATGGTGGGGGTTAACAGCGATAATCATGATGGTCCTATTGTGTCTAATGTTAGCAACGGCAGTCATTCAACTCCTGTAGTTCAGCCATGTGAGGATTCTATGAATGAAGAAACTCATGAGGCTGATGGAACACATCAGGTTGAAAGTTTAGAAAATAAAGAAGATGGGAAAACGATGAACGAAGAAAACTTAAGGTCTACAGATGACATTCAGGATGATGAGATTGCAAAGGATCAAGGACAACTGGAGACTCCAGGTGCACATCATGATGAGGAAGAGACTGCTCGAGAACCTCAAGACAAAGCTGATGGTGGAGAAAAAATCCAAACTGACAACAAAAGGATGCTCGAAGATATCGTTCTTGCATCTGGAAATAAGGATTTGAAGAATGAAACAATTGTGAAAAAAAAGCGCTTTAAAACTAAAGCTAATAGGAGAACAGACTTACAGAATGTCAATTCTCCTAGAAAGTCATTGCGTCTACAAACTCCAGATCCTGGCAAAAAGTCCCCTCATATACAAACTCCAGAACCTAGGAAAAAGTCACCTCATTTACAAACTCCAAAACCTTGGAAAGATCATGCAACCAAAATTGAGGAAGTTTCTGTATCCAGGAATTTAAAGCTGCAACCAGCATCTCCTAGTCAATTCAAAAACTTGGATTTTCATAGTGGGAAGCGTAAGAGAATGCGTTGGTCTGTTGAAGAGGAGGAAATGTTGAAGGAAGGAGTTCAGAAATTCTCTTCTACAGCAAATAAAAATCTACCTTGGAGGAAAATTTTGGAATTTGGTCGTCACATATTTGATAACACACGTACGTTCATGACGCGGAGCCATTCTGTTGATGAAGAAATCTACCTGCTAAAAGAGAGAGGAAAGAAGAAAAAGGGAATGCACAAACAGTTTGTCTTGAAGACTCTGATTTGTAATGGAAGCTATAGAAGCTATTCTAGAGATAAGGTTGATGAAGGCTGTACAGCTCCTTTTGTTGGTCTGTTAATGATGGGCAGTTGGGGAAGAACACTATGA

Protein sequence

MRIKNRRGGRPKPSLRSAASYPSPMASPPFPVQDVPNAEDNTLHEASSKETNDVLDKIDCFQKDTCTRCDQSGDLLVCNEIGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALLRVNELRRKTMVAKRALSDFIDTRMVGGGNSPQIGEAGKKKADDVLTCGVDLDLPNHGSHLGNESSGDQDMQVEQNQSNEGEDRVRTEGDVQPTSMVGVNSDNHDGPIVSNVSNGSHSTPVVQPCEDSMNEETHEADGTHQVESLENKEDGKTMNEENLRSTDDIQDDEIAKDQGQLETPGAHHDEEETAREPQDKADGGEKIQTDNKRMLEDIVLASGNKDLKNETIVKKKRFKTKANRRTDLQNVNSPRKSLRLQTPDPGKKSPHIQTPEPRKKSPHLQTPKPWKDHATKIEEVSVSRNLKLQPASPSQFKNLDFHSGKRKRMRWSVEEEEMLKEGVQKFSSTANKNLPWRKILEFGRHIFDNTRTFMTRSHSVDEEIYLLKERGKKKKGMHKQFVLKTLICNGSYRSYSRDKVDEGCTAPFVGLLMMGSWGRTL

Homology

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BLAST of HG10005522 vs. NCBI nr
Match: XP_038888454.1 (uncharacterized protein LOC120078293 [Benincasa hispida] >XP_038888455.1 uncharacterized protein LOC120078293 [Benincasa hispida])

HSP 1 Score: 813.5 bits (2100), Expect = 1.1e-231
Identity = 419/496 (84.48%), Postives = 446/496 (89.92%), Query Frame = 0


Query: 1   MRIKNRRGGRPKPSLRSAASYPSPMASPPFPVQDVPNAEDNTLHEASSKETNDVLDKIDC 60
           M+IKNRRGGR K S RSAAS PSPMASPP P QDVPNAEDNT+HEASSKETNDVLDKIDC
Sbjct: 1   MKIKNRRGGRSKASRRSAASTPSPMASPPLPDQDVPNAEDNTVHEASSKETNDVLDKIDC 60

Query: 61  FQKDTCTRCDQSGDLLVCNEIGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALLRVNE 120
           FQKDTCTRCDQSGDLLVC EIGCPIALH++CMSCEPSFDEDGRFYCPYCSYKRAL+RVNE
Sbjct: 61  FQKDTCTRCDQSGDLLVCTEIGCPIALHKICMSCEPSFDEDGRFYCPYCSYKRALVRVNE 120

Query: 121 LRRKTMVAKRALSDFIDTRMVGGGNSPQIGEAGKKKADDVLTCGVDLDLPNHGSHLGNES 180
           LRRKTMVAKRALSDFIDTRMVGGG SPQI E GKKKA+DV TCGVD++LPNHGSHLGNES
Sbjct: 121 LRRKTMVAKRALSDFIDTRMVGGGKSPQIEETGKKKANDVSTCGVDVELPNHGSHLGNES 180

Query: 181 SGDQDMQVEQNQSNEGEDRVRTEGDVQPTSMVGVNSDNHDGPIVSNVSNGSHSTPVVQPC 240
           S DQD+QVEQNQ NEGED  RTEGD+QPTSMVGVNS+NHDGPIV NVS+ SHSTPV+QPC
Sbjct: 181 SRDQDLQVEQNQGNEGEDHARTEGDIQPTSMVGVNSENHDGPIVFNVSSSSHSTPVLQPC 240

Query: 241 EDSMNEETHEAD--GTHQVESLENKEDGKTMNEENLRSTDDIQDDEIAKDQGQLETPGAH 300
           EDSMNEETHE D  GTHQVESLE+KEDG+TM++ENLRSTDDIQDD IAKDQGQLETP AH
Sbjct: 241 EDSMNEETHEVDTSGTHQVESLEDKEDGETMDKENLRSTDDIQDDGIAKDQGQLETPSAH 300

Query: 301 HDEEETAREPQDKADGGEKIQTDNKRMLEDIVLASGNKDLKNETIVKKKRFKTKANRRTD 360
           HDEEETAREPQDK DGGE+ Q DN+RMLEDIVLASGN DLK+ETIVKK+RFKTKANRR D
Sbjct: 301 HDEEETAREPQDKDDGGEQTQPDNERMLEDIVLASGNNDLKSETIVKKRRFKTKANRRKD 360

Query: 361 LQNVNSPRKSLR-----------LQTPDPGKKSPHIQTPEPRKKSPHLQTPKPWKDHATK 420
            QNVN PRKSLR           LQTPDPGKKSPHIQTPEPRK SP +QTP+P  DHATK
Sbjct: 361 QQNVNYPRKSLRLQTPDGMKSPHLQTPDPGKKSPHIQTPEPRKMSPRIQTPRPQIDHATK 420

Query: 421 IEEVSVSRNLKLQPASPSQFKNLDFHSGKRKRMRWSVEEEEMLKEGVQKFSSTANKNLPW 480
            E+V VSR+LK QPAS +QFKNLDFH GKRKRM WSVEEEEMLKEGVQKFSSTANKNLPW
Sbjct: 421 TEKVPVSRSLKPQPASQNQFKNLDFHGGKRKRMLWSVEEEEMLKEGVQKFSSTANKNLPW 480

Query: 481 RKILEFGRHIFDNTRT 484
           RKILEFGRHIFD+TRT
Sbjct: 481 RKILEFGRHIFDSTRT 496

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BLAST of HG10005522 vs. NCBI nr
Match: XP_008462016.1 (PREDICTED: protein CHROMATIN REMODELING 4-like isoform X1 [Cucumis melo])

HSP 1 Score: 769.2 bits (1985), Expect = 2.4e-218
Identity = 401/486 (82.51%), Postives = 435/486 (89.51%), Query Frame = 0


Query: 1   MRIKNRRGGRPKPSLRSAAS-YPSPMASPPFPVQDVPNAEDNTLHEASSKETNDVLDKID 60
           MRIKNRRGGR KPS  SA S  PSPMASPP P QDVPN EDN L EAS+KETNDVLDKID
Sbjct: 1   MRIKNRRGGRCKPSRPSATSTTPSPMASPPLPDQDVPNVEDNALQEASNKETNDVLDKID 60

Query: 61  CFQKDTCTRCDQSGDLLVCNEIGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALLRVN 120
           CFQKD+CTRCDQSGDLLVC E GCPIALHELCMSCEPSFDEDGRFYCPYCSYKRAL+RVN
Sbjct: 61  CFQKDSCTRCDQSGDLLVCTEPGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALIRVN 120

Query: 121 ELRRKTMVAKRALSDFIDTRMVGGGNSPQIGEAGKKKADDVLTCGVDLDLPNHGSHLGNE 180
           ELRRKTMVAKRALSDFIDTRMVGGGNSP++GEAGKKK+DD+ TCGVD+DLPN+GSHL NE
Sbjct: 121 ELRRKTMVAKRALSDFIDTRMVGGGNSPRMGEAGKKKSDDISTCGVDVDLPNYGSHLCNE 180

Query: 181 SSGDQDMQVEQNQSNEGEDRVRTEGDVQPTSMVGVNSDNHDGPIVSNVSNGSHSTPVVQP 240
           SS DQD+QVEQNQSNEGE+  R EGDVQPTSMVGVNS+ HDGPIVSNVSN SHS PVVQP
Sbjct: 181 SSRDQDIQVEQNQSNEGENFARAEGDVQPTSMVGVNSEIHDGPIVSNVSNDSHSAPVVQP 240

Query: 241 CEDSMNEETHEAD--GTHQVESLENKEDGKTMNEENLRSTDDIQDDEIAKDQGQLETPGA 300
           CED M+EETHEA+  GTHQVESLE+K+DGKTM+EE LR  DDIQDD IA+DQGQLE PGA
Sbjct: 241 CEDKMDEETHEAETSGTHQVESLEDKDDGKTMDEEILRPIDDIQDDRIAEDQGQLEIPGA 300

Query: 301 HHDEEETAREPQDKADGGEKIQTDNKRMLEDIVLASGNKDLKNETIVKKKRFKTKANRRT 360
           +HD EETA+EPQDK DG E+IQ DN+RMLE+I+ AS + DLKNET  KK+RFKTKANRRT
Sbjct: 301 YHDGEETAQEPQDKDDGREQIQPDNERMLENIIPASVDNDLKNETTAKKRRFKTKANRRT 360

Query: 361 DLQNVNSPRKSLRLQTPDPGKKSPHIQTPEPRKKSPHLQTPKPWKDHATKIEEVSVSRNL 420
           DLQNVNSPRKSLRLQTP+  KKSP I+TPEPR  SPH+QTPKP KDHA KIE+VSVSRNL
Sbjct: 361 DLQNVNSPRKSLRLQTPEV-KKSPRIRTPEPRNNSPHIQTPKPQKDHAIKIEKVSVSRNL 420

Query: 421 KLQPASPSQFKNLDFHSGKRKRMRWSVEEEEMLKEGVQKFSSTANKNLPWRKILEFGRHI 480
           K Q AS + FK+LDFH GKRKRMRWSVEEEEML+EGVQKFSSTANKNLPWRKILEFGRHI
Sbjct: 421 KPQSASHNHFKSLDFHGGKRKRMRWSVEEEEMLREGVQKFSSTANKNLPWRKILEFGRHI 480

Query: 481 FDNTRT 484
           FD+TRT
Sbjct: 481 FDDTRT 485

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BLAST of HG10005522 vs. NCBI nr
Match: XP_011658646.1 (protein CHROMATIN REMODELING 4 [Cucumis sativus] >KGN43387.1 hypothetical protein Csa_020518 [Cucumis sativus])

HSP 1 Score: 751.9 bits (1940), Expect = 3.9e-213
Identity = 394/496 (79.44%), Postives = 429/496 (86.49%), Query Frame = 0


Query: 1   MRIKNRRGGRPKPSLRSAASYPSPMASPPFPVQDVPNAEDNTLHEASSKETNDVLDKIDC 60
           MRIK RRGGR KPS RS  S PSPMAS P P QDVPN EDNTLH+AS+KET+DVLDKIDC
Sbjct: 1   MRIKTRRGGRCKPSRRSVTSTPSPMASSPLPDQDVPNVEDNTLHDASNKETDDVLDKIDC 60

Query: 61  FQKDTCTRCDQSGDLLVCNEIGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALLRVNE 120
           FQKDTCTRCD+SGDLLVC E GCPIALHELCMSCEPSFDEDGRFYCPYCSYKRAL+RVNE
Sbjct: 61  FQKDTCTRCDESGDLLVCTEPGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALIRVNE 120

Query: 121 LRRKTMVAKRALSDFIDTRMVGGGNSPQIGEAGKKKADDVLTCGVDLDLPNHGSHLGNES 180
           LRRKTMVAKRALSDFIDTRMVGG NSP++GEAGKKK+DDV TCG D++LPNHGSHL NES
Sbjct: 121 LRRKTMVAKRALSDFIDTRMVGGDNSPRMGEAGKKKSDDVSTCGGDVNLPNHGSHLCNES 180

Query: 181 SGDQDMQVEQNQSNEGEDRVRTEGDVQPTSMVGVNSDNHDGPIVSNVSNGSHSTPVVQPC 240
           S D D+QVEQNQSNEGEDR R  GDV+PTSMVGVNS+ HDGPIVSNVSN SHS P VQPC
Sbjct: 181 SRDHDIQVEQNQSNEGEDRARAGGDVEPTSMVGVNSEIHDGPIVSNVSNSSHSAPTVQPC 240

Query: 241 EDSMNEETHEAD--GTHQVESLENKEDGKTMNEENLRSTDDIQDDEIAKDQGQLETPGAH 300
           ED M+EETHEA+  GTHQVESLE+KEDG TM++E LR  DDIQDD IA D GQLETPGA+
Sbjct: 241 EDRMDEETHEAETSGTHQVESLEDKEDGITMDKEILRPIDDIQDDRIAMDHGQLETPGAY 300

Query: 301 HDEEETAREPQDKADGGEKIQTDNKRMLEDIVLASGNKDLKNETIVKKKRFKTKANRRTD 360
           H  E TA+E Q+K  G E+IQ DN++MLE+IV ASGN DLKN+T VKK+RFKTKANRRTD
Sbjct: 301 HYGEATAQELQEKDGGREQIQPDNEKMLENIVPASGNNDLKNKTTVKKRRFKTKANRRTD 360

Query: 361 LQNVNSPRKSLRLQ-----------TPDPGKKSPHIQTPEPRKKSPHLQTPKPWKDHATK 420
           LQNVNSPRKSLRLQ           TP+P +KSPHIQTPEPRK SP LQTPKP KD+  K
Sbjct: 361 LQNVNSPRKSLRLQTPEEKKSPRIRTPEPRRKSPHIQTPEPRKNSPRLQTPKPQKDNTIK 420

Query: 421 IEEVSVSRNLKLQPASPSQFKNLDFHSGKRKRMRWSVEEEEMLKEGVQKFSSTANKNLPW 480
           IE+VSVSRNLK QPAS +Q K+LDFHSGKRKRMRWSVEEEEMLKEGV+KFSST NKNLPW
Sbjct: 421 IEKVSVSRNLKPQPASHNQLKSLDFHSGKRKRMRWSVEEEEMLKEGVRKFSSTTNKNLPW 480

Query: 481 RKILEFGRHIFDNTRT 484
           RKILEFGRHIFD+TRT
Sbjct: 481 RKILEFGRHIFDDTRT 496

[Close]

BLAST of HG10005522 vs. NCBI nr
Match: XP_008462017.1 (PREDICTED: protein CHROMATIN REMODELING 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 744.6 bits (1921), Expect = 6.2e-211
Identity = 393/486 (80.86%), Postives = 427/486 (87.86%), Query Frame = 0


Query: 1   MRIKNRRGGRPKPSLRSAAS-YPSPMASPPFPVQDVPNAEDNTLHEASSKETNDVLDKID 60
           MRIKNRRGGR KPS  SA S  PSPMASPP P Q           EAS+KETNDVLDKID
Sbjct: 1   MRIKNRRGGRCKPSRPSATSTTPSPMASPPLPDQ-----------EASNKETNDVLDKID 60

Query: 61  CFQKDTCTRCDQSGDLLVCNEIGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALLRVN 120
           CFQKD+CTRCDQSGDLLVC E GCPIALHELCMSCEPSFDEDGRFYCPYCSYKRAL+RVN
Sbjct: 61  CFQKDSCTRCDQSGDLLVCTEPGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALIRVN 120

Query: 121 ELRRKTMVAKRALSDFIDTRMVGGGNSPQIGEAGKKKADDVLTCGVDLDLPNHGSHLGNE 180
           ELRRKTMVAKRALSDFIDTRMVGGGNSP++GEAGKKK+DD+ TCGVD+DLPN+GSHL NE
Sbjct: 121 ELRRKTMVAKRALSDFIDTRMVGGGNSPRMGEAGKKKSDDISTCGVDVDLPNYGSHLCNE 180

Query: 181 SSGDQDMQVEQNQSNEGEDRVRTEGDVQPTSMVGVNSDNHDGPIVSNVSNGSHSTPVVQP 240
           SS DQD+QVEQNQSNEGE+  R EGDVQPTSMVGVNS+ HDGPIVSNVSN SHS PVVQP
Sbjct: 181 SSRDQDIQVEQNQSNEGENFARAEGDVQPTSMVGVNSEIHDGPIVSNVSNDSHSAPVVQP 240

Query: 241 CEDSMNEETHEAD--GTHQVESLENKEDGKTMNEENLRSTDDIQDDEIAKDQGQLETPGA 300
           CED M+EETHEA+  GTHQVESLE+K+DGKTM+EE LR  DDIQDD IA+DQGQLE PGA
Sbjct: 241 CEDKMDEETHEAETSGTHQVESLEDKDDGKTMDEEILRPIDDIQDDRIAEDQGQLEIPGA 300

Query: 301 HHDEEETAREPQDKADGGEKIQTDNKRMLEDIVLASGNKDLKNETIVKKKRFKTKANRRT 360
           +HD EETA+EPQDK DG E+IQ DN+RMLE+I+ AS + DLKNET  KK+RFKTKANRRT
Sbjct: 301 YHDGEETAQEPQDKDDGREQIQPDNERMLENIIPASVDNDLKNETTAKKRRFKTKANRRT 360

Query: 361 DLQNVNSPRKSLRLQTPDPGKKSPHIQTPEPRKKSPHLQTPKPWKDHATKIEEVSVSRNL 420
           DLQNVNSPRKSLRLQTP+  KKSP I+TPEPR  SPH+QTPKP KDHA KIE+VSVSRNL
Sbjct: 361 DLQNVNSPRKSLRLQTPEV-KKSPRIRTPEPRNNSPHIQTPKPQKDHAIKIEKVSVSRNL 420

Query: 421 KLQPASPSQFKNLDFHSGKRKRMRWSVEEEEMLKEGVQKFSSTANKNLPWRKILEFGRHI 480
           K Q AS + FK+LDFH GKRKRMRWSVEEEEML+EGVQKFSSTANKNLPWRKILEFGRHI
Sbjct: 421 KPQSASHNHFKSLDFHGGKRKRMRWSVEEEEMLREGVQKFSSTANKNLPWRKILEFGRHI 474

Query: 481 FDNTRT 484
           FD+TRT
Sbjct: 481 FDDTRT 474

[Close]

BLAST of HG10005522 vs. NCBI nr
Match: KAA0059268.1 (protein CHROMATIN REMODELING 4-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 704.5 bits (1817), Expect = 7.1e-199
Identity = 370/454 (81.50%), Postives = 403/454 (88.77%), Query Frame = 0


Query: 1   MRIKNRRGGRPKPSLRSAAS-YPSPMASPPFPVQDVPNAEDNTLHEASSKETNDVLDKID 60
           MRIKNRRGGR KPS  SA S  PSPMASPP P QDVPN EDN L EAS+KETNDVLDKID
Sbjct: 1   MRIKNRRGGRCKPSRPSATSTTPSPMASPPLPDQDVPNVEDNALQEASNKETNDVLDKID 60

Query: 61  CFQKDTCTRCDQSGDLLVCNEIGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALLRVN 120
           CFQKD+CTRCDQSGDLLVC E GCPIALHELCMSCEPSFDEDGRFYCPYCSYKRAL+RVN
Sbjct: 61  CFQKDSCTRCDQSGDLLVCTEPGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALIRVN 120

Query: 121 ELRRKTMVAKRALSDFIDTRMVGGGNSPQIGEAGKKKADDVLTCGVDLDLPNHGSHLGNE 180
           ELRRKTMVAKRALSDFIDTRMVGGGNSP++GEAGKKK+DD+ TCGVD+DLPN+GSHL NE
Sbjct: 121 ELRRKTMVAKRALSDFIDTRMVGGGNSPRMGEAGKKKSDDISTCGVDVDLPNYGSHLCNE 180

Query: 181 SSGDQDMQVEQNQSNEGEDRVRTEGDVQPTSMVGVNSDNHDGPIVSNVSNGSHSTPVVQP 240
           SS DQD+QVEQNQSNEGE+  R EGDVQPTSMVGVNS+ HDGPIVSNVSN SHS PVVQP
Sbjct: 181 SSRDQDIQVEQNQSNEGENFARAEGDVQPTSMVGVNSEIHDGPIVSNVSNDSHSAPVVQP 240

Query: 241 CEDSMNEETHEAD--GTHQVESLENKEDGKTMNEENLRSTDDIQDDEIAKDQGQLETPGA 300
           CED M+EETHEA+  GTHQVESLE+K+DGKTM+EE LR  DDIQDD IA+DQGQLE PGA
Sbjct: 241 CEDKMDEETHEAETSGTHQVESLEDKDDGKTMDEEILRPIDDIQDDRIAEDQGQLEIPGA 300

Query: 301 HHDEEETAREPQDKADGGEKIQTDNKRMLEDIVLASGNKDLKNETIVKKKRFKTKANRRT 360
           +HD EETA+EPQDK DG E+IQ DN+RMLE+I+ AS + DLKNET  KK+RFKTKANRRT
Sbjct: 301 YHDGEETAQEPQDKDDGREQIQPDNERMLENIIPASVDNDLKNETTAKKRRFKTKANRRT 360

Query: 361 DLQNVNSPRKSLRLQTPDPGKKSPHIQTPEPRKKSPHLQTPKPWKDHATKIEEVSVSRNL 420
           DLQNVNSPRKSLRLQTP+  KKSP I+TPEPR  SPH+QTPKP KDHA KIE+VSVSRNL
Sbjct: 361 DLQNVNSPRKSLRLQTPEV-KKSPRIRTPEPRNNSPHIQTPKPQKDHAIKIEKVSVSRNL 420

Query: 421 KLQPASPSQFKNLDFHSGKRKRMRWSVEEEEMLK 452
           K Q AS + FK+LDFH GKRKRMRWSVEEEEML+
Sbjct: 421 KPQSASHNHFKSLDFHGGKRKRMRWSVEEEEMLR 453

[Close]

BLAST of HG10005522 vs. ExPASy TrEMBL
Match: A0A1S3CHE7 (protein CHROMATIN REMODELING 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500488 PE=4 SV=1)

HSP 1 Score: 769.2 bits (1985), Expect = 1.1e-218
Identity = 401/486 (82.51%), Postives = 435/486 (89.51%), Query Frame = 0


Query: 1   MRIKNRRGGRPKPSLRSAAS-YPSPMASPPFPVQDVPNAEDNTLHEASSKETNDVLDKID 60
           MRIKNRRGGR KPS  SA S  PSPMASPP P QDVPN EDN L EAS+KETNDVLDKID
Sbjct: 1   MRIKNRRGGRCKPSRPSATSTTPSPMASPPLPDQDVPNVEDNALQEASNKETNDVLDKID 60

Query: 61  CFQKDTCTRCDQSGDLLVCNEIGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALLRVN 120
           CFQKD+CTRCDQSGDLLVC E GCPIALHELCMSCEPSFDEDGRFYCPYCSYKRAL+RVN
Sbjct: 61  CFQKDSCTRCDQSGDLLVCTEPGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALIRVN 120

Query: 121 ELRRKTMVAKRALSDFIDTRMVGGGNSPQIGEAGKKKADDVLTCGVDLDLPNHGSHLGNE 180
           ELRRKTMVAKRALSDFIDTRMVGGGNSP++GEAGKKK+DD+ TCGVD+DLPN+GSHL NE
Sbjct: 121 ELRRKTMVAKRALSDFIDTRMVGGGNSPRMGEAGKKKSDDISTCGVDVDLPNYGSHLCNE 180

Query: 181 SSGDQDMQVEQNQSNEGEDRVRTEGDVQPTSMVGVNSDNHDGPIVSNVSNGSHSTPVVQP 240
           SS DQD+QVEQNQSNEGE+  R EGDVQPTSMVGVNS+ HDGPIVSNVSN SHS PVVQP
Sbjct: 181 SSRDQDIQVEQNQSNEGENFARAEGDVQPTSMVGVNSEIHDGPIVSNVSNDSHSAPVVQP 240

Query: 241 CEDSMNEETHEAD--GTHQVESLENKEDGKTMNEENLRSTDDIQDDEIAKDQGQLETPGA 300
           CED M+EETHEA+  GTHQVESLE+K+DGKTM+EE LR  DDIQDD IA+DQGQLE PGA
Sbjct: 241 CEDKMDEETHEAETSGTHQVESLEDKDDGKTMDEEILRPIDDIQDDRIAEDQGQLEIPGA 300

Query: 301 HHDEEETAREPQDKADGGEKIQTDNKRMLEDIVLASGNKDLKNETIVKKKRFKTKANRRT 360
           +HD EETA+EPQDK DG E+IQ DN+RMLE+I+ AS + DLKNET  KK+RFKTKANRRT
Sbjct: 301 YHDGEETAQEPQDKDDGREQIQPDNERMLENIIPASVDNDLKNETTAKKRRFKTKANRRT 360

Query: 361 DLQNVNSPRKSLRLQTPDPGKKSPHIQTPEPRKKSPHLQTPKPWKDHATKIEEVSVSRNL 420
           DLQNVNSPRKSLRLQTP+  KKSP I+TPEPR  SPH+QTPKP KDHA KIE+VSVSRNL
Sbjct: 361 DLQNVNSPRKSLRLQTPEV-KKSPRIRTPEPRNNSPHIQTPKPQKDHAIKIEKVSVSRNL 420

Query: 421 KLQPASPSQFKNLDFHSGKRKRMRWSVEEEEMLKEGVQKFSSTANKNLPWRKILEFGRHI 480
           K Q AS + FK+LDFH GKRKRMRWSVEEEEML+EGVQKFSSTANKNLPWRKILEFGRHI
Sbjct: 421 KPQSASHNHFKSLDFHGGKRKRMRWSVEEEEMLREGVQKFSSTANKNLPWRKILEFGRHI 480

Query: 481 FDNTRT 484
           FD+TRT
Sbjct: 481 FDDTRT 485

[Close]

BLAST of HG10005522 vs. ExPASy TrEMBL
Match: A0A0A0K518 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G030500 PE=4 SV=1)

HSP 1 Score: 751.9 bits (1940), Expect = 1.9e-213
Identity = 394/496 (79.44%), Postives = 429/496 (86.49%), Query Frame = 0


Query: 1   MRIKNRRGGRPKPSLRSAASYPSPMASPPFPVQDVPNAEDNTLHEASSKETNDVLDKIDC 60
           MRIK RRGGR KPS RS  S PSPMAS P P QDVPN EDNTLH+AS+KET+DVLDKIDC
Sbjct: 1   MRIKTRRGGRCKPSRRSVTSTPSPMASSPLPDQDVPNVEDNTLHDASNKETDDVLDKIDC 60

Query: 61  FQKDTCTRCDQSGDLLVCNEIGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALLRVNE 120
           FQKDTCTRCD+SGDLLVC E GCPIALHELCMSCEPSFDEDGRFYCPYCSYKRAL+RVNE
Sbjct: 61  FQKDTCTRCDESGDLLVCTEPGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALIRVNE 120

Query: 121 LRRKTMVAKRALSDFIDTRMVGGGNSPQIGEAGKKKADDVLTCGVDLDLPNHGSHLGNES 180
           LRRKTMVAKRALSDFIDTRMVGG NSP++GEAGKKK+DDV TCG D++LPNHGSHL NES
Sbjct: 121 LRRKTMVAKRALSDFIDTRMVGGDNSPRMGEAGKKKSDDVSTCGGDVNLPNHGSHLCNES 180

Query: 181 SGDQDMQVEQNQSNEGEDRVRTEGDVQPTSMVGVNSDNHDGPIVSNVSNGSHSTPVVQPC 240
           S D D+QVEQNQSNEGEDR R  GDV+PTSMVGVNS+ HDGPIVSNVSN SHS P VQPC
Sbjct: 181 SRDHDIQVEQNQSNEGEDRARAGGDVEPTSMVGVNSEIHDGPIVSNVSNSSHSAPTVQPC 240

Query: 241 EDSMNEETHEAD--GTHQVESLENKEDGKTMNEENLRSTDDIQDDEIAKDQGQLETPGAH 300
           ED M+EETHEA+  GTHQVESLE+KEDG TM++E LR  DDIQDD IA D GQLETPGA+
Sbjct: 241 EDRMDEETHEAETSGTHQVESLEDKEDGITMDKEILRPIDDIQDDRIAMDHGQLETPGAY 300

Query: 301 HDEEETAREPQDKADGGEKIQTDNKRMLEDIVLASGNKDLKNETIVKKKRFKTKANRRTD 360
           H  E TA+E Q+K  G E+IQ DN++MLE+IV ASGN DLKN+T VKK+RFKTKANRRTD
Sbjct: 301 HYGEATAQELQEKDGGREQIQPDNEKMLENIVPASGNNDLKNKTTVKKRRFKTKANRRTD 360

Query: 361 LQNVNSPRKSLRLQ-----------TPDPGKKSPHIQTPEPRKKSPHLQTPKPWKDHATK 420
           LQNVNSPRKSLRLQ           TP+P +KSPHIQTPEPRK SP LQTPKP KD+  K
Sbjct: 361 LQNVNSPRKSLRLQTPEEKKSPRIRTPEPRRKSPHIQTPEPRKNSPRLQTPKPQKDNTIK 420

Query: 421 IEEVSVSRNLKLQPASPSQFKNLDFHSGKRKRMRWSVEEEEMLKEGVQKFSSTANKNLPW 480
           IE+VSVSRNLK QPAS +Q K+LDFHSGKRKRMRWSVEEEEMLKEGV+KFSST NKNLPW
Sbjct: 421 IEKVSVSRNLKPQPASHNQLKSLDFHSGKRKRMRWSVEEEEMLKEGVRKFSSTTNKNLPW 480

Query: 481 RKILEFGRHIFDNTRT 484
           RKILEFGRHIFD+TRT
Sbjct: 481 RKILEFGRHIFDDTRT 496

[Close]

BLAST of HG10005522 vs. ExPASy TrEMBL
Match: A0A1S3CFV4 (protein CHROMATIN REMODELING 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500488 PE=4 SV=1)

HSP 1 Score: 744.6 bits (1921), Expect = 3.0e-211
Identity = 393/486 (80.86%), Postives = 427/486 (87.86%), Query Frame = 0


Query: 1   MRIKNRRGGRPKPSLRSAAS-YPSPMASPPFPVQDVPNAEDNTLHEASSKETNDVLDKID 60
           MRIKNRRGGR KPS  SA S  PSPMASPP P Q           EAS+KETNDVLDKID
Sbjct: 1   MRIKNRRGGRCKPSRPSATSTTPSPMASPPLPDQ-----------EASNKETNDVLDKID 60

Query: 61  CFQKDTCTRCDQSGDLLVCNEIGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALLRVN 120
           CFQKD+CTRCDQSGDLLVC E GCPIALHELCMSCEPSFDEDGRFYCPYCSYKRAL+RVN
Sbjct: 61  CFQKDSCTRCDQSGDLLVCTEPGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALIRVN 120

Query: 121 ELRRKTMVAKRALSDFIDTRMVGGGNSPQIGEAGKKKADDVLTCGVDLDLPNHGSHLGNE 180
           ELRRKTMVAKRALSDFIDTRMVGGGNSP++GEAGKKK+DD+ TCGVD+DLPN+GSHL NE
Sbjct: 121 ELRRKTMVAKRALSDFIDTRMVGGGNSPRMGEAGKKKSDDISTCGVDVDLPNYGSHLCNE 180

Query: 181 SSGDQDMQVEQNQSNEGEDRVRTEGDVQPTSMVGVNSDNHDGPIVSNVSNGSHSTPVVQP 240
           SS DQD+QVEQNQSNEGE+  R EGDVQPTSMVGVNS+ HDGPIVSNVSN SHS PVVQP
Sbjct: 181 SSRDQDIQVEQNQSNEGENFARAEGDVQPTSMVGVNSEIHDGPIVSNVSNDSHSAPVVQP 240

Query: 241 CEDSMNEETHEAD--GTHQVESLENKEDGKTMNEENLRSTDDIQDDEIAKDQGQLETPGA 300
           CED M+EETHEA+  GTHQVESLE+K+DGKTM+EE LR  DDIQDD IA+DQGQLE PGA
Sbjct: 241 CEDKMDEETHEAETSGTHQVESLEDKDDGKTMDEEILRPIDDIQDDRIAEDQGQLEIPGA 300

Query: 301 HHDEEETAREPQDKADGGEKIQTDNKRMLEDIVLASGNKDLKNETIVKKKRFKTKANRRT 360
           +HD EETA+EPQDK DG E+IQ DN+RMLE+I+ AS + DLKNET  KK+RFKTKANRRT
Sbjct: 301 YHDGEETAQEPQDKDDGREQIQPDNERMLENIIPASVDNDLKNETTAKKRRFKTKANRRT 360

Query: 361 DLQNVNSPRKSLRLQTPDPGKKSPHIQTPEPRKKSPHLQTPKPWKDHATKIEEVSVSRNL 420
           DLQNVNSPRKSLRLQTP+  KKSP I+TPEPR  SPH+QTPKP KDHA KIE+VSVSRNL
Sbjct: 361 DLQNVNSPRKSLRLQTPEV-KKSPRIRTPEPRNNSPHIQTPKPQKDHAIKIEKVSVSRNL 420

Query: 421 KLQPASPSQFKNLDFHSGKRKRMRWSVEEEEMLKEGVQKFSSTANKNLPWRKILEFGRHI 480
           K Q AS + FK+LDFH GKRKRMRWSVEEEEML+EGVQKFSSTANKNLPWRKILEFGRHI
Sbjct: 421 KPQSASHNHFKSLDFHGGKRKRMRWSVEEEEMLREGVQKFSSTANKNLPWRKILEFGRHI 474

Query: 481 FDNTRT 484
           FD+TRT
Sbjct: 481 FDDTRT 474

[Close]

BLAST of HG10005522 vs. ExPASy TrEMBL
Match: A0A5A7UVT3 (Protein CHROMATIN REMODELING 4-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G002030 PE=4 SV=1)

HSP 1 Score: 704.5 bits (1817), Expect = 3.5e-199
Identity = 370/454 (81.50%), Postives = 403/454 (88.77%), Query Frame = 0


Query: 1   MRIKNRRGGRPKPSLRSAAS-YPSPMASPPFPVQDVPNAEDNTLHEASSKETNDVLDKID 60
           MRIKNRRGGR KPS  SA S  PSPMASPP P QDVPN EDN L EAS+KETNDVLDKID
Sbjct: 1   MRIKNRRGGRCKPSRPSATSTTPSPMASPPLPDQDVPNVEDNALQEASNKETNDVLDKID 60

Query: 61  CFQKDTCTRCDQSGDLLVCNEIGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALLRVN 120
           CFQKD+CTRCDQSGDLLVC E GCPIALHELCMSCEPSFDEDGRFYCPYCSYKRAL+RVN
Sbjct: 61  CFQKDSCTRCDQSGDLLVCTEPGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALIRVN 120

Query: 121 ELRRKTMVAKRALSDFIDTRMVGGGNSPQIGEAGKKKADDVLTCGVDLDLPNHGSHLGNE 180
           ELRRKTMVAKRALSDFIDTRMVGGGNSP++GEAGKKK+DD+ TCGVD+DLPN+GSHL NE
Sbjct: 121 ELRRKTMVAKRALSDFIDTRMVGGGNSPRMGEAGKKKSDDISTCGVDVDLPNYGSHLCNE 180

Query: 181 SSGDQDMQVEQNQSNEGEDRVRTEGDVQPTSMVGVNSDNHDGPIVSNVSNGSHSTPVVQP 240
           SS DQD+QVEQNQSNEGE+  R EGDVQPTSMVGVNS+ HDGPIVSNVSN SHS PVVQP
Sbjct: 181 SSRDQDIQVEQNQSNEGENFARAEGDVQPTSMVGVNSEIHDGPIVSNVSNDSHSAPVVQP 240

Query: 241 CEDSMNEETHEAD--GTHQVESLENKEDGKTMNEENLRSTDDIQDDEIAKDQGQLETPGA 300
           CED M+EETHEA+  GTHQVESLE+K+DGKTM+EE LR  DDIQDD IA+DQGQLE PGA
Sbjct: 241 CEDKMDEETHEAETSGTHQVESLEDKDDGKTMDEEILRPIDDIQDDRIAEDQGQLEIPGA 300

Query: 301 HHDEEETAREPQDKADGGEKIQTDNKRMLEDIVLASGNKDLKNETIVKKKRFKTKANRRT 360
           +HD EETA+EPQDK DG E+IQ DN+RMLE+I+ AS + DLKNET  KK+RFKTKANRRT
Sbjct: 301 YHDGEETAQEPQDKDDGREQIQPDNERMLENIIPASVDNDLKNETTAKKRRFKTKANRRT 360

Query: 361 DLQNVNSPRKSLRLQTPDPGKKSPHIQTPEPRKKSPHLQTPKPWKDHATKIEEVSVSRNL 420
           DLQNVNSPRKSLRLQTP+  KKSP I+TPEPR  SPH+QTPKP KDHA KIE+VSVSRNL
Sbjct: 361 DLQNVNSPRKSLRLQTPEV-KKSPRIRTPEPRNNSPHIQTPKPQKDHAIKIEKVSVSRNL 420

Query: 421 KLQPASPSQFKNLDFHSGKRKRMRWSVEEEEMLK 452
           K Q AS + FK+LDFH GKRKRMRWSVEEEEML+
Sbjct: 421 KPQSASHNHFKSLDFHGGKRKRMRWSVEEEEMLR 453

[Close]

BLAST of HG10005522 vs. ExPASy TrEMBL
Match: A0A5D3BUM5 (Protein CHROMATIN REMODELING 4-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84663G00180 PE=4 SV=1)

HSP 1 Score: 679.9 bits (1753), Expect = 9.1e-192
Identity = 362/454 (79.74%), Postives = 395/454 (87.00%), Query Frame = 0


Query: 1   MRIKNRRGGRPKPSLRSAAS-YPSPMASPPFPVQDVPNAEDNTLHEASSKETNDVLDKID 60
           MRIKNRRGGR KPS  SA S  PSPMASPP P Q           EAS+KETNDVLDKID
Sbjct: 1   MRIKNRRGGRCKPSRPSATSTTPSPMASPPLPDQ-----------EASNKETNDVLDKID 60

Query: 61  CFQKDTCTRCDQSGDLLVCNEIGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALLRVN 120
           CFQKD+CTRCDQSGDLLVC E GCPIALHELCMSCEPSFDEDGRFYCPYCSYKRAL+RVN
Sbjct: 61  CFQKDSCTRCDQSGDLLVCTEPGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALIRVN 120

Query: 121 ELRRKTMVAKRALSDFIDTRMVGGGNSPQIGEAGKKKADDVLTCGVDLDLPNHGSHLGNE 180
           ELRRKTMVAKRALSDFIDTRMVGGGNSP++GEAGKKK+DD+ TCGVD+DLPN+GSHL NE
Sbjct: 121 ELRRKTMVAKRALSDFIDTRMVGGGNSPRMGEAGKKKSDDISTCGVDVDLPNYGSHLCNE 180

Query: 181 SSGDQDMQVEQNQSNEGEDRVRTEGDVQPTSMVGVNSDNHDGPIVSNVSNGSHSTPVVQP 240
           SS DQD+QVEQNQSNEGE+  R EGDVQPTSMVGVNS+ HDGPIVSNVSN SHS PVVQP
Sbjct: 181 SSRDQDIQVEQNQSNEGENFARAEGDVQPTSMVGVNSEIHDGPIVSNVSNDSHSAPVVQP 240

Query: 241 CEDSMNEETHEAD--GTHQVESLENKEDGKTMNEENLRSTDDIQDDEIAKDQGQLETPGA 300
           CED M+EETHEA+  GTHQVESLE+K+DGKTM+EE LR  DDIQDD IA+DQGQLE PGA
Sbjct: 241 CEDKMDEETHEAETSGTHQVESLEDKDDGKTMDEEILRPIDDIQDDRIAEDQGQLEIPGA 300

Query: 301 HHDEEETAREPQDKADGGEKIQTDNKRMLEDIVLASGNKDLKNETIVKKKRFKTKANRRT 360
           +HD EETA+EPQDK DG E+IQ DN+RMLE+I+ AS + DLKNET  KK+RFKTKANRRT
Sbjct: 301 YHDGEETAQEPQDKDDGREQIQPDNERMLENIIPASVDNDLKNETTAKKRRFKTKANRRT 360

Query: 361 DLQNVNSPRKSLRLQTPDPGKKSPHIQTPEPRKKSPHLQTPKPWKDHATKIEEVSVSRNL 420
           DLQNVNSPRKSLRLQTP+  KKSP I+TPEPR  SPH+QTPKP KDHA KIE+VSVSRNL
Sbjct: 361 DLQNVNSPRKSLRLQTPEV-KKSPRIRTPEPRNNSPHIQTPKPQKDHAIKIEKVSVSRNL 420

Query: 421 KLQPASPSQFKNLDFHSGKRKRMRWSVEEEEMLK 452
           K Q AS + FK+LDFH GKRKRMRWSVEEEEML+
Sbjct: 421 KPQSASHNHFKSLDFHGGKRKRMRWSVEEEEMLR 442

[Close]

BLAST of HG10005522 vs. TAIR 10
Match: AT1G01150.1 (Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain )

HSP 1 Score: 67.4 bits (163), Expect = 4.1e-11
Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 0


Query: 438 KRMRWSVEEEEMLKEGVQKFSSTANKNLPWRKILEFGRHIFDNTR 483
           KR+ W+V EE+ML+EGV+KFS T NKN+PW+KILE G+ IF  TR
Sbjct: 233 KRVLWTVNEEKMLREGVEKFSDTINKNMPWKKILEMGKGIFHTTR 277

[Close]

BLAST of HG10005522 vs. TAIR 10
Match: AT1G68030.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 7.3e-08
Identity = 23/71 (32.39%), Postives = 36/71 (50.70%), Query Frame = 0


Query: 66  CTRCDQSGDLLVCNEIGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRALLRVNELRRKT 125
           C  C +SG LL C+  GC + +H+ C+   PS+ + G FYC  C+         + + + 
Sbjct: 229 CVNCKESGKLLFCSSDGCEVMVHQKCLDSPPSYHDAGDFYCSLCALTCPSAEYVQFQDEV 288

Query: 126 MVAKRALSDFI 137
             AKR L  F+
Sbjct: 289 AKAKRKLVSFL 299

[Close]

BLAST of HG10005522 vs. TAIR 10
Match: AT5G03780.1 (TRF-like 10 )

HSP 1 Score: 51.6 bits (122), Expect = 2.3e-06
Identity = 71/270 (26.30%), Postives = 124/270 (45.93%), Query Frame = 0


Query: 243 SMNEETHEADGT---HQVESLENKEDGKTMNEENL----RSTDDIQDDEIA--------- 302
           ++ E+T EA+     +  + ++++++  T++ + +    +STD + D E+          
Sbjct: 137 TLREKTVEAEKAVCKYLDKEMKSRDEDITLSGDEIGNQEQSTDIVSDHELQGEKDGCSSK 196

Query: 303 --KDQGQLETPGAHHDE----EETAREPQDKADGGEKIQTDNKRMLEDIVLASGNKDLKN 362
              DQG++ T G   DE    E+ A E    A+  E  +    R+L      +G K   +
Sbjct: 197 PDADQGKVGT-GKVIDEVGASEKVATEKFQDAEDDETAKDQGTRILN---TGAGKKREVS 256

Query: 363 ETIVKKKRFKTKANRRTDLQNVNSPRKSLRLQTPDPGKKSPHIQTPEPRKKSPHLQTPKP 422
             +  ++ F  K   +   QN    R+ L++   D   K            S        
Sbjct: 257 SFLSMQESFSAKEQDQVQ-QNEKRRRRGLKIIDSDISSKG----------SSNERNGEDV 316

Query: 423 WKDHATKIEEVSVSRNLKLQPASP---SQFKNLD----FHSGKRKRMRWSVEEEEMLKEG 482
            +   + ++  S S  ++ Q A+    ++ K +     F   +R+R+ W+ EEEEMLK G
Sbjct: 317 TEQVTSSVQVTSPSGRMRNQQATTKVVAKSKTVRDISFFKMDQRRRLLWTYEEEEMLKVG 376

Query: 483 VQKFSSTANKNLPWRKILEFGRHIFDNTRT 484
           V+KF++ ANKN+PWRKILE G  +F  TRT
Sbjct: 377 VEKFAAEANKNMPWRKILEMGEKVFHETRT 391

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BLAST of HG10005522 vs. TAIR 10
Match: AT5G22760.1 (PHD finger family protein )

HSP 1 Score: 48.1 bits (113), Expect = 2.6e-05
Identity = 20/50 (40.00%), Postives = 27/50 (54.00%), Query Frame = 0


Query: 64  DTCTRCDQSGDLLVCNEIGCPIALHELCMSCEPSFDEDGRFYCPYCSYKR 114
           D C  C   G LL C+  GCP+A H  C+     +  DG +YCP C+ K+
Sbjct: 414 DECRLCGMDGTLLCCD--GCPLAYHSRCIGVVKMYIPDGPWYCPECTIKK 461

The following BLAST results are available for this feature:

BLAST of HG10005522 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888454.1	1.1e-231	84.48	uncharacterized protein LOC120078293 [Benincasa hispida] >XP_038888455.1 unchara...	[more]
XP_008462016.1	2.4e-218	82.51	PREDICTED: protein CHROMATIN REMODELING 4-like isoform X1 [Cucumis melo]	[more]
XP_011658646.1	3.9e-213	79.44	protein CHROMATIN REMODELING 4 [Cucumis sativus] >KGN43387.1 hypothetical protei...	[more]
XP_008462017.1	6.2e-211	80.86	PREDICTED: protein CHROMATIN REMODELING 4-like isoform X2 [Cucumis melo]	[more]
KAA0059268.1	7.1e-199	81.50	protein CHROMATIN REMODELING 4-like isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of HG10005522 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10005522 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CHE7	1.1e-218	82.51	protein CHROMATIN REMODELING 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0K518	1.9e-213	79.44	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G03050...	[more]
A0A1S3CFV4	3.0e-211	80.86	protein CHROMATIN REMODELING 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7UVT3	3.5e-199	81.50	Protein CHROMATIN REMODELING 4-like isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A5D3BUM5	9.1e-192	79.74	Protein CHROMATIN REMODELING 4-like isoform X2 OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of HG10005522 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01150.1	4.1e-11	64.44	Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain	[more]
AT1G68030.1	7.3e-08	32.39	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G03780.1	2.3e-06	26.30	TRF-like 10	[more]
AT5G22760.1	2.6e-05	40.00	PHD finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 65..110 e-value: 5.9E-5 score: 32.5
None	No IPR available	GENE3D	1.10.10.60		coord: 432..504 e-value: 5.5E-7 score: 31.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 356..370
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..322
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 382..401
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..322
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..401
None	No IPR available	PANTHER	PTHR47863:SF5	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN	coord: 29..483
None	No IPR available	PANTHER	PTHR47863	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 29..483
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 61..139 e-value: 2.5E-8 score: 36.0
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 66..109
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 63..112 score: 8.6089
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 60..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005522.1	HG10005522.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding