
HG10005489 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAGGCACAGTAGTGAACCCACCATGGTTGGTACCTCCATAGCTCTGTTACAAGAAAGGTTCAGACAGTTGCAGAAAGACAAGCAAAGGAGAGAGAAGAAGGAGCTTCTTAACCTACTATCCGAATCAAATAGGGTTGATGCCTCGATAATGCATTTACAATCCAACGGCTCGTCAACCTCAAGAGATTTGGACTCCAATTCCCTCTCCCTTGGCCTGAACTTGCAGAATGCAGGTAAGGAAGTTGATATTGATGTCCATGAAGCCAGGTTGATGCCTGGCGACACAAAGTTCTGGTCTGGAAACTCAGTCATGACAAGCGTGTTAAGAAGTTTCGATAGTCCAGATGTCGATACCACTCTTCATCTATAG ATGGGTAGGCACAGTAGTGAACCCACCATGGTTGGTACCTCCATAGCTCTGTTACAAGAAAGGTTCAGACAGTTGCAGAAAGACAAGCAAAGGAGAGAGAAGAAGGAGCTTCTTAACCTACTATCCGAATCAAATAGGGTTGATGCCTCGATAATGCATTTACAATCCAACGGCTCGTCAACCTCAAGAGATTTGGACTCCAATTCCCTCTCCCTTGGCCTGAACTTGCAGAATGCAGGTAAGGAAGTTGATATTGATGTCCATGAAGCCAGGTTGATGCCTGGCGACACAAAGTTCTGGTCTGGAAACTCAGTCATGACAAGCGTGTTAAGAAGTTTCGATAGTCCAGATGTCGATACCACTCTTCATCTATAG ATGGGTAGGCACAGTAGTGAACCCACCATGGTTGGTACCTCCATAGCTCTGTTACAAGAAAGGTTCAGACAGTTGCAGAAAGACAAGCAAAGGAGAGAGAAGAAGGAGCTTCTTAACCTACTATCCGAATCAAATAGGGTTGATGCCTCGATAATGCATTTACAATCCAACGGCTCGTCAACCTCAAGAGATTTGGACTCCAATTCCCTCTCCCTTGGCCTGAACTTGCAGAATGCAGGTAAGGAAGTTGATATTGATGTCCATGAAGCCAGGTTGATGCCTGGCGACACAAAGTTCTGGTCTGGAAACTCAGTCATGACAAGCGTGTTAAGAAGTTTCGATAGTCCAGATGTCGATACCACTCTTCATCTATAG MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVDASIMHLQSNGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLMPGDTKFWSGNSVMTSVLRSFDSPDVDTTLHL Homology
BLAST of HG10005489 vs. NCBI nr
Match: KAE8646145.1 (hypothetical protein Csa_016195, partial [Cucumis sativus]) HSP 1 Score: 174.5 bits (441), Expect = 5.8e-40 Identity = 93/107 (86.92%), Postives = 100/107 (93.46%), Query Frame = 0
BLAST of HG10005489 vs. NCBI nr
Match: KAA0048752.1 (hypothetical protein E6C27_scaffold43G00600 [Cucumis melo var. makuwa] >TYK31583.1 hypothetical protein E5676_scaffold172G00780 [Cucumis melo var. makuwa]) HSP 1 Score: 172.6 bits (436), Expect = 2.2e-39 Identity = 98/127 (77.17%), Postives = 108/127 (85.04%), Query Frame = 0
BLAST of HG10005489 vs. NCBI nr
Match: KAG6589104.1 (hypothetical protein SDJN03_17669, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 128.6 bits (322), Expect = 3.6e-26 Identity = 73/94 (77.66%), Postives = 84/94 (89.36%), Query Frame = 0
BLAST of HG10005489 vs. NCBI nr
Match: KAG6572236.1 (hypothetical protein SDJN03_28964, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 127.1 bits (318), Expect = 1.1e-25 Identity = 79/128 (61.72%), Postives = 90/128 (70.31%), Query Frame = 0
BLAST of HG10005489 vs. NCBI nr
Match: XP_023916992.1 (uncharacterized protein LOC112028527 [Quercus suber]) HSP 1 Score: 98.2 bits (243), Expect = 5.3e-17 Identity = 61/130 (46.92%), Postives = 84/130 (64.62%), Query Frame = 0
BLAST of HG10005489 vs. ExPASy TrEMBL
Match: A0A0A0K617 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G272125 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 9.6e-49 Identity = 107/125 (85.60%), Postives = 115/125 (92.00%), Query Frame = 0
BLAST of HG10005489 vs. ExPASy TrEMBL
Match: A0A5D3E685 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G00780 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39 Identity = 98/127 (77.17%), Postives = 108/127 (85.04%), Query Frame = 0
BLAST of HG10005489 vs. ExPASy TrEMBL
Match: A0A2N9FNY6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16854 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 2.2e-16 Identity = 61/130 (46.92%), Postives = 80/130 (61.54%), Query Frame = 0
BLAST of HG10005489 vs. ExPASy TrEMBL
Match: A0A6J5UK47 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23015 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 2.4e-15 Identity = 65/131 (49.62%), Postives = 86/131 (65.65%), Query Frame = 0
BLAST of HG10005489 vs. ExPASy TrEMBL
Match: A0A7N2M9I5 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 3.1e-15 Identity = 59/130 (45.38%), Postives = 81/130 (62.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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