Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAGGCACAGTAGTGAACCCACCATGGTTGGTACCTCCATAGCTCTGTTACAAGAAAGGTTCAGACAGTTGCAGAAAGACAAGCAAAGGAGAGAGAAGAAGGAGCTTCTTAACCTACTATCCGAATCAAATAGGGTTGATGCCTCGATAATGCATTTACAATCCAACGGCTCGTCAACCTCAAGAGATTTGGACTCCAATTCCCTCTCCCTTGGCCTGAACTTGCAGAATGCAGGTAAGGAAGTTGATATTGATGTCCATGAAGCCAGGTTGATGCCTGGCGACACAAAGTTCTGGTCTGGAAACTCAGTCATGACAAGCGTGTTAAGAAGTTTCGATAGTCCAGATGTCGATACCACTCTTCATCTATAG
mRNA sequence
ATGGGTAGGCACAGTAGTGAACCCACCATGGTTGGTACCTCCATAGCTCTGTTACAAGAAAGGTTCAGACAGTTGCAGAAAGACAAGCAAAGGAGAGAGAAGAAGGAGCTTCTTAACCTACTATCCGAATCAAATAGGGTTGATGCCTCGATAATGCATTTACAATCCAACGGCTCGTCAACCTCAAGAGATTTGGACTCCAATTCCCTCTCCCTTGGCCTGAACTTGCAGAATGCAGGTAAGGAAGTTGATATTGATGTCCATGAAGCCAGGTTGATGCCTGGCGACACAAAGTTCTGGTCTGGAAACTCAGTCATGACAAGCGTGTTAAGAAGTTTCGATAGTCCAGATGTCGATACCACTCTTCATCTATAG
Coding sequence (CDS)
ATGGGTAGGCACAGTAGTGAACCCACCATGGTTGGTACCTCCATAGCTCTGTTACAAGAAAGGTTCAGACAGTTGCAGAAAGACAAGCAAAGGAGAGAGAAGAAGGAGCTTCTTAACCTACTATCCGAATCAAATAGGGTTGATGCCTCGATAATGCATTTACAATCCAACGGCTCGTCAACCTCAAGAGATTTGGACTCCAATTCCCTCTCCCTTGGCCTGAACTTGCAGAATGCAGGTAAGGAAGTTGATATTGATGTCCATGAAGCCAGGTTGATGCCTGGCGACACAAAGTTCTGGTCTGGAAACTCAGTCATGACAAGCGTGTTAAGAAGTTTCGATAGTCCAGATGTCGATACCACTCTTCATCTATAG
Protein sequence
MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVDASIMHLQSNGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLMPGDTKFWSGNSVMTSVLRSFDSPDVDTTLHL
Homology
BLAST of HG10005489 vs. NCBI nr
Match:
KAE8646145.1 (hypothetical protein Csa_016195, partial [Cucumis sativus])
HSP 1 Score: 174.5 bits (441), Expect = 5.8e-40
Identity = 93/107 (86.92%), Postives = 100/107 (93.46%), Query Frame = 0
Query: 1 MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVDASIMHLQSNGSS 60
MGRH+SEPTMVGTSIALLQERFRQLQK+KQRRE+KELLNLL ESNRVDASIMHL+ NGSS
Sbjct: 1 MGRHNSEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSS 60
Query: 61 TSRDLDSNSLSLGLNLQ-NAGKEVDIDVHEARLMPGDTKFWSGNSVM 107
TSRDLDSNSLSLGLNL+ NAGK+VDID+HEAR MPGDTKF GNS M
Sbjct: 61 TSRDLDSNSLSLGLNLENNAGKQVDIDIHEARSMPGDTKFELGNSFM 107
BLAST of HG10005489 vs. NCBI nr
Match:
KAA0048752.1 (hypothetical protein E6C27_scaffold43G00600 [Cucumis melo var. makuwa] >TYK31583.1 hypothetical protein E5676_scaffold172G00780 [Cucumis melo var. makuwa])
HSP 1 Score: 172.6 bits (436), Expect = 2.2e-39
Identity = 98/127 (77.17%), Postives = 108/127 (85.04%), Query Frame = 0
Query: 1 MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVDASIMHL--QSNG 60
MGRH SEPTMVGTSIALLQERFRQLQK+KQ+RE+KELLNLL ESNRVDASIMHL + NG
Sbjct: 1 MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNG 60
Query: 61 SSTSRDLDSNSLSLGLNLQ-NAGKEVDIDVHEARLMPGDTKFWSGNSVMTSVLRSFDSPD 120
S T R LDSNSLSLGLNL+ N GK+VDID+HEAR +P DTKF NS M S LRSFD+ +
Sbjct: 61 SLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDTKFGPENSFMVSTLRSFDT-N 120
Query: 121 VDTTLHL 125
VDTTLHL
Sbjct: 121 VDTTLHL 126
BLAST of HG10005489 vs. NCBI nr
Match:
KAG6589104.1 (hypothetical protein SDJN03_17669, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 128.6 bits (322), Expect = 3.6e-26
Identity = 73/94 (77.66%), Postives = 84/94 (89.36%), Query Frame = 0
Query: 1 MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVD-ASIMHLQSNGS 60
MGRHSSE TM+GTSIALLQERFRQLQKDKQRREKKELL+LLS+SNRV+ +SIMHL+SN S
Sbjct: 1 MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHLESNRS 60
Query: 61 STSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLM 94
S SRDL+ +SLSLGLN +AGK+VDI HEAR +
Sbjct: 61 SNSRDLNPDSLSLGLNSSSAGKQVDI--HEARAL 92
BLAST of HG10005489 vs. NCBI nr
Match:
KAG6572236.1 (hypothetical protein SDJN03_28964, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 127.1 bits (318), Expect = 1.1e-25
Identity = 79/128 (61.72%), Postives = 90/128 (70.31%), Query Frame = 0
Query: 1 MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVDASIMHLQSNGSS 60
M RHSSEP +VGTSIALLQERFRQLQK+K RREKKE++ LLS+SN + S
Sbjct: 3 MSRHSSEPAIVGTSIALLQERFRQLQKEKVRREKKEVVKLLSDSNSL------------S 62
Query: 61 TSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLMPGDTKFWSGNSVMTSVLRSFDSP---- 120
TSRDL NSLSLGLNL NAGK+V D HE RLMPGDTK ++ RS+D+P
Sbjct: 63 TSRDLAFNSLSLGLNLGNAGKQV--DSHEGRLMPGDTK------LIPITFRSYDTPDVVV 110
Query: 121 DVDTTLHL 125
DVDTTLHL
Sbjct: 123 DVDTTLHL 110
BLAST of HG10005489 vs. NCBI nr
Match:
XP_023916992.1 (uncharacterized protein LOC112028527 [Quercus suber])
HSP 1 Score: 98.2 bits (243), Expect = 5.3e-17
Identity = 61/130 (46.92%), Postives = 84/130 (64.62%), Query Frame = 0
Query: 1 MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRV------DASIMHL 60
MGR S++PTMV +SIALLQERFRQL+K K+RRE+KELLNL +E+ R+ + S +
Sbjct: 1 MGRQSNDPTMVSSSIALLQERFRQLEKVKERREEKELLNLFAETERIMPTTHFEPSKLSF 60
Query: 61 QSNGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLMPGDTKFWSGNSVMTSVLRSFD 120
Q ++ +R +S SL LNLQ K+ D+ +A P T W ++ M S RSF+
Sbjct: 61 QPQMTTPNRSTHRDSPSLELNLQT--KQADV---QAMKRPTLTDLWPNDAAMASTSRSFE 120
Query: 121 SPDVDTTLHL 125
+ DVDT+LHL
Sbjct: 121 NSDVDTSLHL 125
BLAST of HG10005489 vs. ExPASy TrEMBL
Match:
A0A0A0K617 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G272125 PE=4 SV=1)
HSP 1 Score: 202.6 bits (514), Expect = 9.6e-49
Identity = 107/125 (85.60%), Postives = 115/125 (92.00%), Query Frame = 0
Query: 1 MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVDASIMHLQSNGSS 60
MGRH+SEPTMVGTSIALLQERFRQLQK+KQRRE+KELLNLL ESNRVDASIMHL+ NGSS
Sbjct: 1 MGRHNSEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSS 60
Query: 61 TSRDLDSNSLSLGLNLQ-NAGKEVDIDVHEARLMPGDTKFWSGNSVMTSVLRSFDSPDVD 120
TSRDLDSNSLSLGLNL+ NAGK+VDID+HEAR MPGDTKF GNS M S RSFDSP+VD
Sbjct: 61 TSRDLDSNSLSLGLNLENNAGKQVDIDIHEARSMPGDTKFELGNSFMVSTFRSFDSPNVD 120
Query: 121 TTLHL 125
TTLHL
Sbjct: 121 TTLHL 125
BLAST of HG10005489 vs. ExPASy TrEMBL
Match:
A0A5D3E685 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G00780 PE=4 SV=1)
HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39
Identity = 98/127 (77.17%), Postives = 108/127 (85.04%), Query Frame = 0
Query: 1 MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVDASIMHL--QSNG 60
MGRH SEPTMVGTSIALLQERFRQLQK+KQ+RE+KELLNLL ESNRVDASIMHL + NG
Sbjct: 1 MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNG 60
Query: 61 SSTSRDLDSNSLSLGLNLQ-NAGKEVDIDVHEARLMPGDTKFWSGNSVMTSVLRSFDSPD 120
S T R LDSNSLSLGLNL+ N GK+VDID+HEAR +P DTKF NS M S LRSFD+ +
Sbjct: 61 SLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDTKFGPENSFMVSTLRSFDT-N 120
Query: 121 VDTTLHL 125
VDTTLHL
Sbjct: 121 VDTTLHL 126
BLAST of HG10005489 vs. ExPASy TrEMBL
Match:
A0A2N9FNY6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16854 PE=4 SV=1)
HSP 1 Score: 95.1 bits (235), Expect = 2.2e-16
Identity = 61/130 (46.92%), Postives = 80/130 (61.54%), Query Frame = 0
Query: 1 MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRV------DASIMHL 60
MGR S++PTMV +SIALLQERFRQL+K K+RRE+KELL L +E+ R+ + S +
Sbjct: 1 MGRQSNDPTMVSSSIALLQERFRQLEKVKERREEKELLKLFAETERIMPTTHFEPSKLSF 60
Query: 61 QSNGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLMPGDTKFWSGNSVMTSVLRSFD 120
Q + R +S SLGLNLQ K+ D +A MP W + M S RSF+
Sbjct: 61 QPEMITPHRSTLQDSPSLGLNLQT--KQADF---QAMKMPTLPNLWPNGAAMASTSRSFE 120
Query: 121 SPDVDTTLHL 125
+ DVDT+LHL
Sbjct: 121 NSDVDTSLHL 125
BLAST of HG10005489 vs. ExPASy TrEMBL
Match:
A0A6J5UK47 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23015 PE=4 SV=1)
HSP 1 Score: 91.7 bits (226), Expect = 2.4e-15
Identity = 65/131 (49.62%), Postives = 86/131 (65.65%), Query Frame = 0
Query: 1 MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESN----RVDASIMHLQS 60
MGR SS+PT+V +SIALLQERFRQLQK K+RRE+++LL +LSE++ RV SI H +S
Sbjct: 1 MGRESSDPTVVSSSIALLQERFRQLQKVKERREEQQLLKMLSETDHHHQRV-GSIRHFES 60
Query: 61 NGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLMPGDTKFWSGNSVMTSVL---RSF 120
+ + S D +SLSLGLNLQ ++VD H A T W N+ S +SF
Sbjct: 61 DMARPSSPAD-HSLSLGLNLQT--RQVD---HCAMKTQPSTISWPNNTTAASAASASKSF 120
Query: 121 DSPDVDTTLHL 125
D+ D+DT+LHL
Sbjct: 121 DNSDLDTSLHL 124
BLAST of HG10005489 vs. ExPASy TrEMBL
Match:
A0A7N2M9I5 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 91.3 bits (225), Expect = 3.1e-15
Identity = 59/130 (45.38%), Postives = 81/130 (62.31%), Query Frame = 0
Query: 1 MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRV------DASIMHL 60
M R S++ TMV +SIALLQERFRQL+K K+RRE+KELLNL +E+ R+ + S +
Sbjct: 1 MSRQSNDATMVSSSIALLQERFRQLEKVKERREEKELLNLFAETERIMPTTHFEPSKLSF 60
Query: 61 QSNGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLMPGDTKFWSGNSVMTSVLRSFD 120
Q ++ +R +S SL LNLQ K+ D+ +A P T W + M S RSF+
Sbjct: 61 QPQMTTPNRSTLRDSPSLELNLQT--KQADV---QAMKRPTLTDLWPNGAAMASTSRSFE 120
Query: 121 SPDVDTTLHL 125
+ DVDT+LHL
Sbjct: 121 NSDVDTSLHL 125
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAE8646145.1 | 5.8e-40 | 86.92 | hypothetical protein Csa_016195, partial [Cucumis sativus] | [more] |
KAA0048752.1 | 2.2e-39 | 77.17 | hypothetical protein E6C27_scaffold43G00600 [Cucumis melo var. makuwa] >TYK31583... | [more] |
KAG6589104.1 | 3.6e-26 | 77.66 | hypothetical protein SDJN03_17669, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6572236.1 | 1.1e-25 | 61.72 | hypothetical protein SDJN03_28964, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023916992.1 | 5.3e-17 | 46.92 | uncharacterized protein LOC112028527 [Quercus suber] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0K617 | 9.6e-49 | 85.60 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G272125 PE=4 SV=1 | [more] |
A0A5D3E685 | 1.1e-39 | 77.17 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A2N9FNY6 | 2.2e-16 | 46.92 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16854 PE=4 SV=1 | [more] |
A0A6J5UK47 | 2.4e-15 | 49.62 | Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23015 PE=4 S... | [more] |
A0A7N2M9I5 | 3.1e-15 | 45.38 | Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |