HG10005466 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005466
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	fasciclin-like arabinogalactan protein 7
Location	Chr07: 2818170 .. 2818937 (-)
RNA-Seq Expression	HG10005466
Synteny	HG10005466

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTTTCCATGATTTTCACTGTTTGTAGTGCATTGTTGCTTCTGAGCTCTTCATCTGCCAATGCCCAAACAGCAAGCCCCCCCTTACTTAGCCCGACCCCGGCACCGGCGCCAGCCCCAGATTTTGTCAACCTCACAGATCTGCTCACTGTAGCTGGTCCATTTCACACCTTCCTCAGCTACCTCCAGTCCACCAAAGTTATTGAAACCTTCCAAAACCAAGCCAATAACACGGAGGAAGGAGTGACTATCTTTGTCCCAAAAGATGGCGCTTTCTCGGCGCAAAAGAAACCGTCTCTCTCGAATCTCACCGAAGATCAGCTCAAGTCTCTTATCCTATTTCATGGCTTGCCACATTACTATTCCCTTGCTGAATTCAGGAACCTCAGCCTTCAGAACCCGATCCCAACATTCGCCGGTGGGCAGTACAGTTTGAACTTCACAGACGTTTCAGGGACTATCCACATTGGCTCTGGCTGGACTAACACAAAAGTGAGTAGCAGTGTGCATTCAAGTGATCCTGTTGCAGTTTACCAAGTTGACAAAATTCTTCTGCCTGAGGCAATCTTCGGAACCGATATCCCACCGACCCCAGCCCCAGCACCGGCGCCTGATATCGCTCCTGTTGCAGACGCTCCTTCGGAGGTTAGTGATGGAAAGGCTGCTCCATCTTCAGAACCAAAGCCGTCATCTTCCCATAGGATCATCAACTGGGGAATTTTGATTCAAATTGTTTTGGCAATTTCAGGTGGATTTTTGTTTTGA

mRNA sequence

ATGGAATTTTCCATGATTTTCACTGTTTGTAGTGCATTGTTGCTTCTGAGCTCTTCATCTGCCAATGCCCAAACAGCAAGCCCCCCCTTACTTAGCCCGACCCCGGCACCGGCGCCAGCCCCAGATTTTGTCAACCTCACAGATCTGCTCACTGTAGCTGGTCCATTTCACACCTTCCTCAGCTACCTCCAGAACCTCAGCCTTCAGAACCCGATCCCAACATTCGCCGGTGGGCAGTACAGTTTGAACTTCACAGACGTTTCAGGGACTATCCACATTGGCTCTGGCTGGACTAACACAAAAGTGAGTAGCAGTGTGCATTCAAGTGATCCTGTTGCAGTTTACCAAGTTGACAAAATTCTTCTGCCTGAGGCAATCTTCGGAACCGATATCCCACCGACCCCAGCCCCAGCACCGGCGCCTGATATCGCTCCTGTTGCAGACGCTCCTTCGGAGGTTAGTGATGGAAAGGCTGCTCCATCTTCAGAACCAAAGCCGTCATCTTCCCATAGGATCATCAACTGGGGAATTTTGATTCAAATTGTTTTGGCAATTTCAGGTGGATTTTTGTTTTGA

Coding sequence (CDS)

ATGGAATTTTCCATGATTTTCACTGTTTGTAGTGCATTGTTGCTTCTGAGCTCTTCATCTGCCAATGCCCAAACAGCAAGCCCCCCCTTACTTAGCCCGACCCCGGCACCGGCGCCAGCCCCAGATTTTGTCAACCTCACAGATCTGCTCACTGTAGCTGGTCCATTTCACACCTTCCTCAGCTACCTCCAGAACCTCAGCCTTCAGAACCCGATCCCAACATTCGCCGGTGGGCAGTACAGTTTGAACTTCACAGACGTTTCAGGGACTATCCACATTGGCTCTGGCTGGACTAACACAAAAGTGAGTAGCAGTGTGCATTCAAGTGATCCTGTTGCAGTTTACCAAGTTGACAAAATTCTTCTGCCTGAGGCAATCTTCGGAACCGATATCCCACCGACCCCAGCCCCAGCACCGGCGCCTGATATCGCTCCTGTTGCAGACGCTCCTTCGGAGGTTAGTGATGGAAAGGCTGCTCCATCTTCAGAACCAAAGCCGTCATCTTCCCATAGGATCATCAACTGGGGAATTTTGATTCAAATTGTTTTGGCAATTTCAGGTGGATTTTTGTTTTGA

Protein sequence

MEFSMIFTVCSALLLLSSSSANAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFLSYLQNLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVDKILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAAPSSEPKPSSSHRIINWGILIQIVLAISGGFLF

Homology

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BLAST of HG10005466 vs. NCBI nr
Match: XP_038888065.1 (fasciclin-like arabinogalactan protein 7 [Benincasa hispida])

HSP 1 Score: 319.3 bits (817), Expect = 2.2e-83
Identity = 182/255 (71.37%), Postives = 184/255 (72.16%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSSANAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           M+FSMIFTVCSALLLLSSSSANAQTASPP LSPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MDFSMIFTVCSALLLLSSSSANAQTASPPSLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQ-------------------------------------------------------- 120
            YLQ                                                        
Sbjct: 61  GYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLILFHGLPH 120

Query: 121 --------NLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
                   NLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAAPSSEPKPSSSHRIINWG 192
           VDK+LLPEAIFGTDIPPTPAPAP PDIAPVADAPS VSDGK APSSEPKPSSS RIINWG
Sbjct: 181 VDKLLLPEAIFGTDIPPTPAPAPTPDIAPVADAPSAVSDGKVAPSSEPKPSSSDRIINWG 240

[Close]

BLAST of HG10005466 vs. NCBI nr
Match: XP_004144534.1 (fasciclin-like arabinogalactan protein 7 [Cucumis sativus] >XP_031745158.1 fasciclin-like arabinogalactan protein 7 [Cucumis sativus] >KGN43447.1 hypothetical protein Csa_020154 [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 3.8e-83
Identity = 181/255 (70.98%), Postives = 184/255 (72.16%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSSANAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           M FSMIFTVCSALLLLSSSSANAQTASPP  SPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MGFSMIFTVCSALLLLSSSSANAQTASPPSFSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQ-------------------------------------------------------- 120
           SYLQ                                                        
Sbjct: 61  SYLQSTKAIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTADQLKSLILFHGLPH 120

Query: 121 --------NLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
                   NLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAAPSSEPKPSSSHRIINWG 192
           VDK+LLPEAIFGTDIPPTPAPAPAPDIAP ADAPS+V DG+AAPSSEPKPSSSHRIINWG
Sbjct: 181 VDKLLLPEAIFGTDIPPTPAPAPAPDIAPAADAPSDVIDGRAAPSSEPKPSSSHRIINWG 240

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BLAST of HG10005466 vs. NCBI nr
Match: XP_008455511.1 (PREDICTED: fasciclin-like arabinogalactan protein 7 [Cucumis melo])

HSP 1 Score: 317.0 bits (811), Expect = 1.1e-82
Identity = 180/255 (70.59%), Postives = 184/255 (72.16%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSSANAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           M FSMIFTVCSALLLLSSSSANAQTASPP  SPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MGFSMIFTVCSALLLLSSSSANAQTASPPSFSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQ-------------------------------------------------------- 120
           SYLQ                                                        
Sbjct: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTADQLKSLILFHGLPH 120

Query: 121 --------NLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
                   NLSLQNPIPTFAGGQ+SLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPIPTFAGGQFSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAAPSSEPKPSSSHRIINWG 192
           VDK+LLPEAIFGTDIPPTPAPAPAPDIAP ADAPS+V DG+AAPSSEPKPSSSHRIINWG
Sbjct: 181 VDKLLLPEAIFGTDIPPTPAPAPAPDIAPAADAPSDVIDGRAAPSSEPKPSSSHRIINWG 240

[Close]

BLAST of HG10005466 vs. NCBI nr
Match: KAA0059150.1 (fasciclin-like arabinogalactan protein 7 [Cucumis melo var. makuwa] >TYK02538.1 fasciclin-like arabinogalactan protein 7 [Cucumis melo var. makuwa])

HSP 1 Score: 314.3 bits (804), Expect = 7.2e-82
Identity = 178/255 (69.80%), Postives = 183/255 (71.76%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSSANAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           M F M+FTVCSALLLLSSSSANAQTASPP  SPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MGFFMVFTVCSALLLLSSSSANAQTASPPSFSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQ-------------------------------------------------------- 120
           SYLQ                                                        
Sbjct: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTADQLKSLILFHGLPH 120

Query: 121 --------NLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
                   NLSLQNPIPTFAGGQ+SLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPIPTFAGGQFSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAAPSSEPKPSSSHRIINWG 192
           VDK+LLPEAIFGTDIPPTPAPAPAPDIAP ADAPS+V DG+AAPSSEPKPSSSHRIINWG
Sbjct: 181 VDKLLLPEAIFGTDIPPTPAPAPAPDIAPAADAPSDVIDGRAAPSSEPKPSSSHRIINWG 240

[Close]

BLAST of HG10005466 vs. NCBI nr
Match: XP_022952566.1 (fasciclin-like arabinogalactan protein 7 [Cucurbita moschata] >XP_022969223.1 fasciclin-like arabinogalactan protein 7 [Cucurbita maxima] >KAG6572251.1 Fasciclin-like arabinogalactan protein 7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011881.1 Fasciclin-like arabinogalactan protein 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 306.2 bits (783), Expect = 2.0e-79
Identity = 177/255 (69.41%), Postives = 181/255 (70.98%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSSANAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           MEFSMIFTVCSALLLLSSSSA+AQTASPP LSP PAPAPA DFVNLTDLLTVAGPFHTFL
Sbjct: 1   MEFSMIFTVCSALLLLSSSSADAQTASPPSLSPAPAPAPASDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQ-------------------------------------------------------- 120
           SYLQ                                                        
Sbjct: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTDDQLKSLILFHGLPH 120

Query: 121 --------NLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
                   NLSLQNPI TFAGGQYSLNFTDVSG+IHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 FYTLSEFRNLSLQNPITTFAGGQYSLNFTDVSGSIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAAPSSEPKPSSSHRIINWG 192
           VDK+LLPEAIFGTDIPPTPAPAPAPDIAP ADAPS  SDGK APSSEPKPSSS+RIINWG
Sbjct: 181 VDKVLLPEAIFGTDIPPTPAPAPAPDIAPAADAPSADSDGKTAPSSEPKPSSSNRIINWG 240

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BLAST of HG10005466 vs. ExPASy Swiss-Prot
Match: Q9SJ81 (Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana OX=3702 GN=FLA7 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-39
Identity = 115/252 (45.63%), Postives = 142/252 (56.35%), Query Frame = 0


Query: 5   MIFTVCSALLLLSSSSANAQTASP--PLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFLSY 64
           M  ++  A++ L   SA+A+TASP  P+L PTPAPAPAP+ VNLT+LL+VAGPFHTFL Y
Sbjct: 4   MQLSIFIAVVALIVCSASAKTASPPAPVLPPTPAPAPAPENVNLTELLSVAGPFHTFLDY 63

Query: 65  L----------------------------------------------------------- 124
           L                                                           
Sbjct: 64  LLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALPHYY 123

Query: 125 -----QNLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVD 184
                +NLS   P+ TFAGGQYSL FTDVSGT+ I S WT TKVSSSV S+DPVAVYQV+
Sbjct: 124 SLSEFKNLSQSGPVSTFAGGQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVAVYQVN 183

Query: 185 KILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAAPSSEPKPSSSHRIINWG-- 188
           ++LLPEAIFGTD+PP PAPAPAP ++  +D+PS V+D + A S    P SSH+  N G  
Sbjct: 184 RVLLPEAIFGTDVPPMPAPAPAPIVSAPSDSPS-VADSEGASS----PKSSHK--NSGQK 243

[Close]

BLAST of HG10005466 vs. ExPASy Swiss-Prot
Match: Q8LEE9 (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA12 PE=2 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 4.0e-11
Identity = 48/120 (40.00%), Postives = 67/120 (55.83%), Query Frame = 0


Query: 56  FHTFLSYLQNLSLQ---NPIPTFAG----GQYSLNFTDVSGTIHIGSGWTNTKVSSSVHS 115
           FH   SY+ + + Q   NP+ T AG    G + LN T    T++I SG TNT VS +V+S
Sbjct: 109 FHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYS 168

Query: 116 SDPVAVYQVDKILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAAPSSEPKPSS 169
              +AVYQVDK+LLP+ +F    P  PAPAPAP    V+ +  +  D  ++    P  +S
Sbjct: 169 DGQLAVYQVDKVLLPQQVFD---PRPPAPAPAPS---VSKSKKKKDDSDSSSDDSPADAS 222

[Close]

BLAST of HG10005466 vs. ExPASy Swiss-Prot
Match: Q9FFH6 (Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA13 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.8e-09
Identity = 49/144 (34.03%), Postives = 68/144 (47.22%), Query Frame = 0


Query: 40  APDFVNLTDLLTVAGPFHTFLSYLQNLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTN 99
           +P F  L DLL+V+ P  T  S               GG Y LNFT     +++ +G   
Sbjct: 109 SPKFYTLEDLLSVSNPVRTQASGRD-----------VGGVYGLNFTGQGNQVNVSTGVVE 168

Query: 100 TKVSSSVHSSDPVAVYQVDKILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAA 159
           T++S+S+    P+AVY VD +LLPE +FG       AP P      V+D  SE S   AA
Sbjct: 169 TRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPMAPPPKSKSPDVSD-DSESSKKAAA 228

Query: 160 PSSEPKPSSSHRIINWGILIQIVL 184
           PS   K  S       G+ + +V+
Sbjct: 229 PSESEKSGSGEMNTGLGLGLGLVV 240

[Close]

BLAST of HG10005466 vs. ExPASy Swiss-Prot
Match: Q8LEJ6 (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA11 PE=2 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 4.2e-08
Identity = 42/133 (31.58%), Postives = 67/133 (50.38%), Query Frame = 0


Query: 58  TFLSYLQNLSLQNPIPTFAG----GQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVA 117
           T ++  Q  ++ NP+ T AG    G++ LN T     ++I +G  +  V++SV+S   +A
Sbjct: 112 TLITMPQFQTVSNPLRTQAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLA 171

Query: 118 VYQVDKILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAAPSSEPKPSSSHRII 177
           VYQVD++LLP A+FG+ + P PAP     +     +    S G     S     +     
Sbjct: 172 VYQVDQVLLPLAMFGSSVAPAPAPEKGGSV-----SKGSASGGDDGGDSTDSSDAERTGF 231

Query: 178 NWGILIQIVLAIS 187
            +GI I  V AI+
Sbjct: 232 GFGIRITTVAAIA 239

[Close]

BLAST of HG10005466 vs. ExPASy Swiss-Prot
Match: Q9SIL7 (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6 PE=2 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 5.5e-08
Identity = 43/130 (33.08%), Postives = 68/130 (52.31%), Query Frame = 0


Query: 41  PDFVNLTDLLTVAGPFHTFLSYLQNLSLQNPIPTFAGGQYSLNFTD--VSGTIHIGSGWT 100
           P + +L+DLL  + P  T  +               GG + LNFT    S  +++ +G  
Sbjct: 112 PKYYSLSDLLLASNPVRTQATGQD------------GGVFGLNFTGQAQSNQVNVSTGVV 171

Query: 101 NTKVSSSVHSSDPVAVYQVDKILLPEAIFGTDIPPTPAPAPAPDIAPV-ADAPSEVSDGK 160
            T++++++    P+AVY VD +LLPE +FGT   PT APAP    +   AD+P+   + K
Sbjct: 172 ETRINNALRQQFPLAVYVVDSVLLPEELFGTKTTPTGAPAPKSSTSSSDADSPAADDEHK 229

Query: 161 AAPSSEPKPS 168
           +A SS  + S
Sbjct: 232 SAGSSVKRTS 229

[Close]

BLAST of HG10005466 vs. ExPASy TrEMBL
Match: A0A0A0K597 (FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G037510 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.8e-83
Identity = 181/255 (70.98%), Postives = 184/255 (72.16%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSSANAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           M FSMIFTVCSALLLLSSSSANAQTASPP  SPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MGFSMIFTVCSALLLLSSSSANAQTASPPSFSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQ-------------------------------------------------------- 120
           SYLQ                                                        
Sbjct: 61  SYLQSTKAIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTADQLKSLILFHGLPH 120

Query: 121 --------NLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
                   NLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAAPSSEPKPSSSHRIINWG 192
           VDK+LLPEAIFGTDIPPTPAPAPAPDIAP ADAPS+V DG+AAPSSEPKPSSSHRIINWG
Sbjct: 181 VDKLLLPEAIFGTDIPPTPAPAPAPDIAPAADAPSDVIDGRAAPSSEPKPSSSHRIINWG 240

[Close]

BLAST of HG10005466 vs. ExPASy TrEMBL
Match: A0A1S3C2C3 (fasciclin-like arabinogalactan protein 7 OS=Cucumis melo OX=3656 GN=LOC103495664 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.4e-83
Identity = 180/255 (70.59%), Postives = 184/255 (72.16%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSSANAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           M FSMIFTVCSALLLLSSSSANAQTASPP  SPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MGFSMIFTVCSALLLLSSSSANAQTASPPSFSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQ-------------------------------------------------------- 120
           SYLQ                                                        
Sbjct: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTADQLKSLILFHGLPH 120

Query: 121 --------NLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
                   NLSLQNPIPTFAGGQ+SLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPIPTFAGGQFSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAAPSSEPKPSSSHRIINWG 192
           VDK+LLPEAIFGTDIPPTPAPAPAPDIAP ADAPS+V DG+AAPSSEPKPSSSHRIINWG
Sbjct: 181 VDKLLLPEAIFGTDIPPTPAPAPAPDIAPAADAPSDVIDGRAAPSSEPKPSSSHRIINWG 240

[Close]

BLAST of HG10005466 vs. ExPASy TrEMBL
Match: A0A5D3BU74 (Fasciclin-like arabinogalactan protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00170 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.5e-82
Identity = 178/255 (69.80%), Postives = 183/255 (71.76%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSSANAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           M F M+FTVCSALLLLSSSSANAQTASPP  SPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MGFFMVFTVCSALLLLSSSSANAQTASPPSFSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQ-------------------------------------------------------- 120
           SYLQ                                                        
Sbjct: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTADQLKSLILFHGLPH 120

Query: 121 --------NLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
                   NLSLQNPIPTFAGGQ+SLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPIPTFAGGQFSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAAPSSEPKPSSSHRIINWG 192
           VDK+LLPEAIFGTDIPPTPAPAPAPDIAP ADAPS+V DG+AAPSSEPKPSSSHRIINWG
Sbjct: 181 VDKLLLPEAIFGTDIPPTPAPAPAPDIAPAADAPSDVIDGRAAPSSEPKPSSSHRIINWG 240

[Close]

BLAST of HG10005466 vs. ExPASy TrEMBL
Match: A0A6J1I0D1 (fasciclin-like arabinogalactan protein 7 OS=Cucurbita maxima OX=3661 GN=LOC111468289 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 9.5e-80
Identity = 177/255 (69.41%), Postives = 181/255 (70.98%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSSANAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           MEFSMIFTVCSALLLLSSSSA+AQTASPP LSP PAPAPA DFVNLTDLLTVAGPFHTFL
Sbjct: 1   MEFSMIFTVCSALLLLSSSSADAQTASPPSLSPAPAPAPASDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQ-------------------------------------------------------- 120
           SYLQ                                                        
Sbjct: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTDDQLKSLILFHGLPH 120

Query: 121 --------NLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
                   NLSLQNPI TFAGGQYSLNFTDVSG+IHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 FYTLSEFRNLSLQNPITTFAGGQYSLNFTDVSGSIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAAPSSEPKPSSSHRIINWG 192
           VDK+LLPEAIFGTDIPPTPAPAPAPDIAP ADAPS  SDGK APSSEPKPSSS+RIINWG
Sbjct: 181 VDKVLLPEAIFGTDIPPTPAPAPAPDIAPAADAPSADSDGKTAPSSEPKPSSSNRIINWG 240

[Close]

BLAST of HG10005466 vs. ExPASy TrEMBL
Match: A0A6J1GKL2 (fasciclin-like arabinogalactan protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111455217 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 9.5e-80
Identity = 177/255 (69.41%), Postives = 181/255 (70.98%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSSANAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           MEFSMIFTVCSALLLLSSSSA+AQTASPP LSP PAPAPA DFVNLTDLLTVAGPFHTFL
Sbjct: 1   MEFSMIFTVCSALLLLSSSSADAQTASPPSLSPAPAPAPASDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQ-------------------------------------------------------- 120
           SYLQ                                                        
Sbjct: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTDDQLKSLILFHGLPH 120

Query: 121 --------NLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
                   NLSLQNPI TFAGGQYSLNFTDVSG+IHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 FYTLSEFRNLSLQNPITTFAGGQYSLNFTDVSGSIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAAPSSEPKPSSSHRIINWG 192
           VDK+LLPEAIFGTDIPPTPAPAPAPDIAP ADAPS  SDGK APSSEPKPSSS+RIINWG
Sbjct: 181 VDKVLLPEAIFGTDIPPTPAPAPAPDIAPAADAPSADSDGKTAPSSEPKPSSSNRIINWG 240

[Close]

BLAST of HG10005466 vs. TAIR 10
Match: AT2G04780.1 (FASCICLIN-like arabinoogalactan 7 )

HSP 1 Score: 164.5 bits (415), Expect = 8.6e-41
Identity = 115/252 (45.63%), Postives = 142/252 (56.35%), Query Frame = 0


Query: 5   MIFTVCSALLLLSSSSANAQTASP--PLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFLSY 64
           M  ++  A++ L   SA+A+TASP  P+L PTPAPAPAP+ VNLT+LL+VAGPFHTFL Y
Sbjct: 4   MQLSIFIAVVALIVCSASAKTASPPAPVLPPTPAPAPAPENVNLTELLSVAGPFHTFLDY 63

Query: 65  L----------------------------------------------------------- 124
           L                                                           
Sbjct: 64  LLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALPHYY 123

Query: 125 -----QNLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVD 184
                +NLS   P+ TFAGGQYSL FTDVSGT+ I S WT TKVSSSV S+DPVAVYQV+
Sbjct: 124 SLSEFKNLSQSGPVSTFAGGQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVAVYQVN 183

Query: 185 KILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAAPSSEPKPSSSHRIINWG-- 188
           ++LLPEAIFGTD+PP PAPAPAP ++  +D+PS V+D + A S    P SSH+  N G  
Sbjct: 184 RVLLPEAIFGTDVPPMPAPAPAPIVSAPSDSPS-VADSEGASS----PKSSHK--NSGQK 243

[Close]

BLAST of HG10005466 vs. TAIR 10
Match: AT2G04780.2 (FASCICLIN-like arabinoogalactan 7 )

HSP 1 Score: 164.5 bits (415), Expect = 8.6e-41
Identity = 115/252 (45.63%), Postives = 142/252 (56.35%), Query Frame = 0


Query: 5   MIFTVCSALLLLSSSSANAQTASP--PLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFLSY 64
           M  ++  A++ L   SA+A+TASP  P+L PTPAPAPAP+ VNLT+LL+VAGPFHTFL Y
Sbjct: 4   MQLSIFIAVVALIVCSASAKTASPPAPVLPPTPAPAPAPENVNLTELLSVAGPFHTFLDY 63

Query: 65  L----------------------------------------------------------- 124
           L                                                           
Sbjct: 64  LLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALPHYY 123

Query: 125 -----QNLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVD 184
                +NLS   P+ TFAGGQYSL FTDVSGT+ I S WT TKVSSSV S+DPVAVYQV+
Sbjct: 124 SLSEFKNLSQSGPVSTFAGGQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVAVYQVN 183

Query: 185 KILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAAPSSEPKPSSSHRIINWG-- 188
           ++LLPEAIFGTD+PP PAPAPAP ++  +D+PS V+D + A S    P SSH+  N G  
Sbjct: 184 RVLLPEAIFGTDVPPMPAPAPAPIVSAPSDSPS-VADSEGASS----PKSSHK--NSGQK 243

[Close]

BLAST of HG10005466 vs. TAIR 10
Match: AT5G60490.1 (FASCICLIN-like arabinogalactan-protein 12 )

HSP 1 Score: 69.7 bits (169), Expect = 2.9e-12
Identity = 48/120 (40.00%), Postives = 67/120 (55.83%), Query Frame = 0


Query: 56  FHTFLSYLQNLSLQ---NPIPTFAG----GQYSLNFTDVSGTIHIGSGWTNTKVSSSVHS 115
           FH   SY+ + + Q   NP+ T AG    G + LN T    T++I SG TNT VS +V+S
Sbjct: 109 FHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYS 168

Query: 116 SDPVAVYQVDKILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAAPSSEPKPSS 169
              +AVYQVDK+LLP+ +F    P  PAPAPAP    V+ +  +  D  ++    P  +S
Sbjct: 169 DGQLAVYQVDKVLLPQQVFD---PRPPAPAPAPS---VSKSKKKKDDSDSSSDDSPADAS 222

[Close]

BLAST of HG10005466 vs. TAIR 10
Match: AT5G44130.1 (FASCICLIN-like arabinogalactan protein 13 precursor )

HSP 1 Score: 63.2 bits (152), Expect = 2.7e-10
Identity = 49/144 (34.03%), Postives = 68/144 (47.22%), Query Frame = 0


Query: 40  APDFVNLTDLLTVAGPFHTFLSYLQNLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTN 99
           +P F  L DLL+V+ P  T  S               GG Y LNFT     +++ +G   
Sbjct: 109 SPKFYTLEDLLSVSNPVRTQASGRD-----------VGGVYGLNFTGQGNQVNVSTGVVE 168

Query: 100 TKVSSSVHSSDPVAVYQVDKILLPEAIFGTDIPPTPAPAPAPDIAPVADAPSEVSDGKAA 159
           T++S+S+    P+AVY VD +LLPE +FG       AP P      V+D  SE S   AA
Sbjct: 169 TRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPMAPPPKSKSPDVSD-DSESSKKAAA 228

Query: 160 PSSEPKPSSSHRIINWGILIQIVL 184
           PS   K  S       G+ + +V+
Sbjct: 229 PSESEKSGSGEMNTGLGLGLGLVV 240

[Close]

BLAST of HG10005466 vs. TAIR 10
Match: AT2G20520.1 (FASCICLIN-like arabinogalactan 6 )

HSP 1 Score: 59.3 bits (142), Expect = 3.9e-09
Identity = 43/130 (33.08%), Postives = 68/130 (52.31%), Query Frame = 0


Query: 41  PDFVNLTDLLTVAGPFHTFLSYLQNLSLQNPIPTFAGGQYSLNFTD--VSGTIHIGSGWT 100
           P + +L+DLL  + P  T  +               GG + LNFT    S  +++ +G  
Sbjct: 112 PKYYSLSDLLLASNPVRTQATGQD------------GGVFGLNFTGQAQSNQVNVSTGVV 171

Query: 101 NTKVSSSVHSSDPVAVYQVDKILLPEAIFGTDIPPTPAPAPAPDIAPV-ADAPSEVSDGK 160
            T++++++    P+AVY VD +LLPE +FGT   PT APAP    +   AD+P+   + K
Sbjct: 172 ETRINNALRQQFPLAVYVVDSVLLPEELFGTKTTPTGAPAPKSSTSSSDADSPAADDEHK 229

Query: 161 AAPSSEPKPS 168
           +A SS  + S
Sbjct: 232 SAGSSVKRTS 229

The following BLAST results are available for this feature:

BLAST of HG10005466 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888065.1	2.2e-83	71.37	fasciclin-like arabinogalactan protein 7 [Benincasa hispida]	[more]
XP_004144534.1	3.8e-83	70.98	fasciclin-like arabinogalactan protein 7 [Cucumis sativus] >XP_031745158.1 fasci...	[more]
XP_008455511.1	1.1e-82	70.59	PREDICTED: fasciclin-like arabinogalactan protein 7 [Cucumis melo]	[more]
KAA0059150.1	7.2e-82	69.80	fasciclin-like arabinogalactan protein 7 [Cucumis melo var. makuwa] >TYK02538.1 ...	[more]
XP_022952566.1	2.0e-79	69.41	fasciclin-like arabinogalactan protein 7 [Cucurbita moschata] >XP_022969223.1 fa...	[more]

BLAST of HG10005466 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ81	1.2e-39	45.63	Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana OX=3702 GN=FLA7...	[more]
Q8LEE9	4.0e-11	40.00	Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9FFH6	3.8e-09	34.03	Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q8LEJ6	4.2e-08	31.58	Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9SIL7	5.5e-08	33.08	Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6...	[more]

BLAST of HG10005466 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K597	1.8e-83	70.98	FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G037510 PE=3 S...	[more]
A0A1S3C2C3	5.4e-83	70.59	fasciclin-like arabinogalactan protein 7 OS=Cucumis melo OX=3656 GN=LOC103495664...	[more]
A0A5D3BU74	3.5e-82	69.80	Fasciclin-like arabinogalactan protein 7 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1I0D1	9.5e-80	69.41	fasciclin-like arabinogalactan protein 7 OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]
A0A6J1GKL2	9.5e-80	69.41	fasciclin-like arabinogalactan protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of HG10005466 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04780.1	8.6e-41	45.63	FASCICLIN-like arabinoogalactan 7	[more]
AT2G04780.2	8.6e-41	45.63	FASCICLIN-like arabinoogalactan 7	[more]
AT5G60490.1	2.9e-12	40.00	FASCICLIN-like arabinogalactan-protein 12	[more]
AT5G44130.1	2.7e-10	34.03	FASCICLIN-like arabinogalactan protein 13 precursor	[more]
AT2G20520.1	3.9e-09	33.08	FASCICLIN-like arabinogalactan 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..169
None	No IPR available	PANTHER	PTHR32077:SF70	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7	coord: 64..189
None	No IPR available	PANTHER	PTHR32077:SF70	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7	coord: 2..64
IPR045003	Fasciclin-like arabinogalactan protein, group A	PANTHER	PTHR32077	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN	coord: 2..64
IPR045003	Fasciclin-like arabinogalactan protein, group A	PANTHER	PTHR32077	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN	coord: 64..189
IPR036378	FAS1 domain superfamily	SUPERFAMILY	82153	FAS1 domain	coord: 39..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005466.1	HG10005466.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009834	plant-type secondary cell wall biogenesis
cellular_component	GO:0005886	plasma membrane