HG10005449 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005449
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein E6-like
Location	Chr07: 2696508 .. 2698382 (+)
RNA-Seq Expression	HG10005449
Synteny	HG10005449

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATGGCAGCTTCCACTACTTTCAACCTTCTCTTCTTCTTCTTCTTCCTCTTCCTCCTCTCCTCTGTCCAAATCGAAGCCAGAGTCAATAAATTCTTCAGTAAGTTCGTTCATACGGATCACGAGGATGTTCTTAATCTTCCACCGGCGCCGGTCTCTGCTCCGCCTGAGATTTCTCCATCTCTGGCACCAACGCCGGCTCCCGCGCCGTTTTTCGACGAATCGCAGAATGCTTACGGTCTATACGGACGTGATTCCGACGCTGATGAAAATACTCGGACGATCACCGACGTCGAGGAGGAGATTCTCGCAGGAGACGGTGAGGAGGAGGGGAATCACAAATCTAGCTATCCGACGACGAATTTACAGACGGAAAATTACGAAAGCCCTAGAAGATACGAGGAGTACCAAAACACTAACTACGAGAACATCAACGGATTTAGAAATTCGGAGTATGAGAACAACAATGAGAACAAAAATTCCGAGTACGAGAGCGATTTTGAGAACAATAACGCTAGAAATTACCAGTACCAGAGCAATTTTGAGGACGACGGCTACAGAAGGAGGCGATACGAACCGACACAGCAGCAAGGGATGAGCGACACCAGATTCATGGAGAACGGAAGGTATTTTCATGATATTAACTCGAAGAATGGAGAAGAAAATGAATCGTATGGAAGCAAGAAGTATCCGAAATACGAGTTCGATTCAATGGAGGAGTATGAGAAGAGTGAGGGATTGCTTCCTTGATGCAGAGAGGAGGAGGGGGAATTTTAGGGTTTAACTTAAACTTGAACTCTTAAATTTATGGAGGTTTTTTTGATGTTGTGTGTGTGATTTTGGTGTTTTTATCTTTGAGTTGTGAATTGTTTTTGCACAACTTGAATGAATGTTCTTTGGGCTTTTAATTTTGTTTAATGGGGAAGAGATGTGGATGTGGTTTTAATGTAGAAAAGTGATACTGAATATATATATTATATATATGTTGTTTCCATTTTGGAACTAAATTCCAGAATGAGATTAATAGATTCAATGTTTAGGTTTGTTCACAAAAATTCAGATGAATGACATTCTAAAACTACTTTGAATTTACAAGTTATAAATATGAACACGAACAATGGTTAGTTGAAGCGTTCATGCTCCCTTTTTTTTTTTACCCACACAAAGTATATATATATAAATCTAGATTTAAATACTATTTTAGTCGCTATAGTTTTGGTTTTGATCCTTAATACTCTCAAATTGTTCATTTTGGTCCCTATACTCTCAACTTTAATTTATTTAGTCCTTATACTTTAAAATTTATATTTTAATTTTGGTTCATTTTGGTCTTTATATTTTTTAAAAAGTTATCATTTTGGTCCTTCATTTTTAAAGGATAAAAATGGTCACTTTTTTTTAAATTGTTCAAATATCAAAATGAACCAAAGTAGGAAGTATAAGAACCAAAATGAACATTTTTAAAGTATAATGACTAAAATGAACATGTTTAAAGTATAGGGACTAAAATGAACCAAAGTTGATGGTATAAGGACCAAAATGAACAAAAATCAGAAATACAATAACTAAAATAATATTTAAATAAAAAAACTAACATGTGGCTATTTTTTATTTGACAGCTATTTGAATGCAACTGAGACATAACATTAAGTATTTTCTTATAGCCATTAATAAGATAGATATTAGGTGTGTAAAACCTCCATATCTCGACCACTTTGTTTTAAATTAAATTTGATTAGAATTAGAATTGAACAGAACGTCTCTTGGGTTCTAGTTTACCCAGGAAGAAGAAGCTTCAAATTGCCTCCATATAGGCAAATGATTAGGGTTGCAAGGTTTTTAAGCCCTACTCATCGTTTTGTAAGGAAATAA

mRNA sequence

ATGGCTATGGCAGCTTCCACTACTTTCAACCTTCTCTTCTTCTTCTTCTTCCTCTTCCTCCTCTCCTCTGTCCAAATCGAAGCCAGAGTCAATAAATTCTTCAGTAAGTTCGTTCATACGGATCACGAGGATGTTCTTAATCTTCCACCGGCGCCGGTCTCTGCTCCGCCTGAGATTTCTCCATCTCTGGCACCAACGCCGGCTCCCGCGCCGTTTTTCGACGAATCGCAGAATGCTTACGGTCTATACGGACGTGATTCCGACGCTGATGAAAATACTCGGACGATCACCGACGTCGAGGAGGAGATTCTCGCAGGAGACGGTGAGGAGGAGGGGAATCACAAATCTAGCTATCCGACGACGAATTTACAGACGGAAAATTACGAAAGCCCTAGAAGATACGAGGAGTACCAAAACACTAACTACGAGAACATCAACGGATTTAGAAATTCGGAGTATGAGAACAACAATGAGAACAAAAATTCCGAGTACGAGAGCGATTTTGAGAACAATAACGCTAGAAATTACCAGTACCAGAGCAATTTTGAGGACGACGGCTACAGAAGGAGGCGATACGAACCGACACAGCAGCAAGGGATGAGCGACACCAGATTCATGGAGAACGGAAGAATTAGAATTGAACAGAACGTCTCTTGGGTTCTAGTTTACCCAGGAAGAAGAAGCTTCAAATTGCCTCCATATAGGCAAATGATTAGGGTTGCAAGGTTTTTAAGCCCTACTCATCGTTTTGTAAGGAAATAA

Coding sequence (CDS)

ATGGCTATGGCAGCTTCCACTACTTTCAACCTTCTCTTCTTCTTCTTCTTCCTCTTCCTCCTCTCCTCTGTCCAAATCGAAGCCAGAGTCAATAAATTCTTCAGTAAGTTCGTTCATACGGATCACGAGGATGTTCTTAATCTTCCACCGGCGCCGGTCTCTGCTCCGCCTGAGATTTCTCCATCTCTGGCACCAACGCCGGCTCCCGCGCCGTTTTTCGACGAATCGCAGAATGCTTACGGTCTATACGGACGTGATTCCGACGCTGATGAAAATACTCGGACGATCACCGACGTCGAGGAGGAGATTCTCGCAGGAGACGGTGAGGAGGAGGGGAATCACAAATCTAGCTATCCGACGACGAATTTACAGACGGAAAATTACGAAAGCCCTAGAAGATACGAGGAGTACCAAAACACTAACTACGAGAACATCAACGGATTTAGAAATTCGGAGTATGAGAACAACAATGAGAACAAAAATTCCGAGTACGAGAGCGATTTTGAGAACAATAACGCTAGAAATTACCAGTACCAGAGCAATTTTGAGGACGACGGCTACAGAAGGAGGCGATACGAACCGACACAGCAGCAAGGGATGAGCGACACCAGATTCATGGAGAACGGAAGAATTAGAATTGAACAGAACGTCTCTTGGGTTCTAGTTTACCCAGGAAGAAGAAGCTTCAAATTGCCTCCATATAGGCAAATGATTAGGGTTGCAAGGTTTTTAAGCCCTACTCATCGTTTTGTAAGGAAATAA

Protein sequence

MAMAASTTFNLLFFFFFLFLLSSVQIEARVNKFFSKFVHTDHEDVLNLPPAPVSAPPEISPSLAPTPAPAPFFDESQNAYGLYGRDSDADENTRTITDVEEEILAGDGEEEGNHKSSYPTTNLQTENYESPRRYEEYQNTNYENINGFRNSEYENNNENKNSEYESDFENNNARNYQYQSNFEDDGYRRRRYEPTQQQGMSDTRFMENGRIRIEQNVSWVLVYPGRRSFKLPPYRQMIRVARFLSPTHRFVRK

Homology

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BLAST of HG10005449 vs. NCBI nr
Match: XP_038886989.1 (protein E6-like [Benincasa hispida])

HSP 1 Score: 302.8 bits (774), Expect = 2.9e-78
Identity = 173/211 (81.99%), Postives = 184/211 (87.20%), Query Frame = 0


Query: 4   AASTTFNLL-FFFFFLFLLSSVQIEARVNKFFSKFVHTDHEDV-LNLPPAPVSAPPEISP 63
           AASTTFNLL FFFFF+ LLSSVQIEARVNKFFSKF++TD E V   LPPAPVSAPPEISP
Sbjct: 3   AASTTFNLLSFFFFFILLLSSVQIEARVNKFFSKFINTDREVVPTKLPPAPVSAPPEISP 62

Query: 64  SLAPTPAPAPFFDESQNAYGLYGRDSDADENTRTITDVEEEILAGDG--EEEGNHKSSYP 123
           SLAPTPAPAPFFDESQNAYGLYGRD+DADENTRTITDVEEEILAGDG  E+E NHK++YP
Sbjct: 63  SLAPTPAPAPFFDESQNAYGLYGRDADADENTRTITDVEEEILAGDGEDEDEDNHKAAYP 122

Query: 124 TTNLQTENYESPRRYEEYQNTNYENINGFRNSEYENNNENKNSEYESDFENNNARNYQYQ 183
            TN QT N         Y N NYEN NGFRNSEYEN+NE +NSEYES FENNNARNYQYQ
Sbjct: 123 MTNSQTGN---------YGNNNYENNNGFRNSEYENHNEYRNSEYESAFENNNARNYQYQ 182

Query: 184 SNFEDDGYRRRRYEPTQQQGMSDTRFMENGR 211
           SNFEDDGYRRRR+EPT+QQGMSDTRFMENGR
Sbjct: 183 SNFEDDGYRRRRHEPTRQQGMSDTRFMENGR 204

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BLAST of HG10005449 vs. NCBI nr
Match: XP_022969172.1 (probable ATP-dependent RNA helicase ddx42 isoform X2 [Cucurbita maxima])

HSP 1 Score: 258.1 bits (658), Expect = 8.1e-65
Identity = 160/248 (64.52%), Postives = 179/248 (72.18%), Query Frame = 0


Query: 1   MAMAASTTFNLLFFFFFLFLLSSVQIEARVNKFFSKFVHTDHEDVLNL--PPAPVSAPPE 60
           MAMAAS TF  L F F   LLSSVQIEARVNKFFSKF+H D + VL +   PAPVS PPE
Sbjct: 1   MAMAASITFKHLPFIF--LLLSSVQIEARVNKFFSKFIHADRDVVLPVAFSPAPVSVPPE 60

Query: 61  ISPSLAPTPAPAPFFDESQNAYGLYGRDSDADENTRTITDVEEEILAGDGEEEGNHKSSY 120
           ISPSLAPTPAPAPFFDESQNAYGLYG D+D  E++RTITDVEEEILA DGE++  HKS Y
Sbjct: 61  ISPSLAPTPAPAPFFDESQNAYGLYGSDADDSESSRTITDVEEEILAEDGEDKKTHKSGY 120

Query: 121 PTTNLQTENYESPRRYEE-------YQNTNYENINGFRNSEYENNNENKNSEYE------ 180
             TNL T+N+ESP+RYE        Y+N+ YE+ N  RNSEYENNNE++NSEYE      
Sbjct: 121 -QTNLHTDNFESPKRYESRNDGNSGYRNSEYESNNDHRNSEYENNNEHRNSEYENNNEYR 180

Query: 181 -----------------SDFENNNARNYQYQSNFEDDGYRRRRYEPTQQQGMSDTRFMEN 217
                            SDFEN+  RNYQYQSN E DGYR+RRYEPT+QQGMSDTRFMEN
Sbjct: 181 NSEYENNNNEYRNTEYKSDFENSGVRNYQYQSNVEGDGYRKRRYEPTEQQGMSDTRFMEN 240

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BLAST of HG10005449 vs. NCBI nr
Match: KAA0059120.1 (protein E6-like [Cucumis melo var. makuwa])

HSP 1 Score: 257.3 bits (656), Expect = 1.4e-64
Identity = 153/214 (71.50%), Postives = 172/214 (80.37%), Query Frame = 0


Query: 2   AMAASTTFNLLFF-FFFLFLLSSVQIEARVNKFFSKFVHTDHEDVLN--LPPAPVSAPPE 61
           A +ASTTFN     FFFL LLSSVQ EARVNKFFSKF+HTDHE+V++  L PAP+S PPE
Sbjct: 3   AASASTTFNFNHLSFFFLLLLSSVQTEARVNKFFSKFIHTDHEEVVSNTLSPAPLSVPPE 62

Query: 62  ISPSLAPTPAPAPFFDESQNAYGLYGRDSDADENTRTITDVEEEILAGDG-EEEGNHKSS 121
            SPSLAPTPAPAPFFDESQNAYGLYG D D DEN RTITDVEEEIL G+G ++E N KS 
Sbjct: 63  TSPSLAPTPAPAPFFDESQNAYGLYGSDPDTDENPRTITDVEEEILGGEGDQDETNRKSE 122

Query: 122 YPTTN-LQTENYESPRRYEEYQNTNYENINGFRNSEYENNNENKNSEYESDFENNNARNY 181
           +P  N +QT + E     E+YQN NYE  NGFRNSEYEN+NE +NSEYE++  NN  RNY
Sbjct: 123 FPMNNFVQTRDDE-----EQYQNKNYEYNNGFRNSEYENHNEYRNSEYENN--NNEGRNY 182

Query: 182 QYQSNFEDDGYRRRRYEPTQQQGMSDTRFMENGR 211
           QYQSNFED GYRR R+EPT+QQGMSDTRFMENGR
Sbjct: 183 QYQSNFEDGGYRRSRFEPTEQQGMSDTRFMENGR 209

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BLAST of HG10005449 vs. NCBI nr
Match: XP_011659700.1 (protein E6 [Cucumis sativus] >KGN43470.1 hypothetical protein Csa_020541 [Cucumis sativus])

HSP 1 Score: 256.9 bits (655), Expect = 1.8e-64
Identity = 152/217 (70.05%), Postives = 173/217 (79.72%), Query Frame = 0


Query: 2   AMAASTTF-----NLLFFFFFLFLLSSVQIEARVNKFFSKFVHTDHEDVLN-LPPAPVSA 61
           A +AS TF     +  FFFFFL L+SSVQIEARVNKFFSKF+HTDHE V N L PAP+S 
Sbjct: 3   AASASATFKFNHLSFSFFFFFLLLISSVQIEARVNKFFSKFIHTDHEVVPNTLSPAPLSV 62

Query: 62  PPEISPSLAPTPAPAPFFDESQNAYGLYGRDSDADENTRTITDVEEEILAGDG-EEEGNH 121
           PPE SPSLAPTPAPAPFFDESQNAYGLYG D DADENTRTITDVEEEIL G+G ++EGN 
Sbjct: 63  PPETSPSLAPTPAPAPFFDESQNAYGLYGSDPDADENTRTITDVEEEILGGEGDQDEGND 122

Query: 122 KSSYPTTN-LQTENYESPRRYEEYQNTNYENINGFRNSEYENNNENKNSEYESDFENNNA 181
           KS +P  N ++T N E     E+YQN NYEN NGFRNSEY+N NE +NSEYE++  NN  
Sbjct: 123 KSGFPMNNFVETRNEE-----EQYQNKNYENNNGFRNSEYDNRNEYRNSEYENN--NNEG 182

Query: 182 RNYQYQSNFEDDGYRRRRYEPTQQQGMSDTRFMENGR 211
           RNY+ Q NFE+ GYRR R+EPT+Q+GMSDTRFMENGR
Sbjct: 183 RNYEDQRNFEEGGYRRSRFEPTEQEGMSDTRFMENGR 212

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BLAST of HG10005449 vs. NCBI nr
Match: XP_008455495.1 (PREDICTED: protein E6-like [Cucumis melo] >TYK21625.1 protein E6-like [Cucumis melo var. makuwa])

HSP 1 Score: 256.9 bits (655), Expect = 1.8e-64
Identity = 153/214 (71.50%), Postives = 171/214 (79.91%), Query Frame = 0


Query: 2   AMAASTTFNLLFF-FFFLFLLSSVQIEARVNKFFSKFVHTDHEDVL--NLPPAPVSAPPE 61
           A +ASTTFN     FFFL LLSSVQ EARVNKFFSKF+HTDHE+V+   L PAP+S PPE
Sbjct: 3   AASASTTFNFNHLSFFFLLLLSSVQTEARVNKFFSKFIHTDHEEVVPNTLSPAPLSVPPE 62

Query: 62  ISPSLAPTPAPAPFFDESQNAYGLYGRDSDADENTRTITDVEEEILAGDG-EEEGNHKSS 121
            SPSLAPTPAPAPFFDESQNAYGLYG D D DEN RTITDVEEEIL G+G ++E N KS 
Sbjct: 63  TSPSLAPTPAPAPFFDESQNAYGLYGSDPDTDENPRTITDVEEEILGGEGDQDETNRKSE 122

Query: 122 YPTTN-LQTENYESPRRYEEYQNTNYENINGFRNSEYENNNENKNSEYESDFENNNARNY 181
           +P  N +QT + E     E+YQN NYE  NGFRNSEYEN+NE +NSEYE++  NN  RNY
Sbjct: 123 FPMNNFVQTRDDE-----EQYQNKNYEYNNGFRNSEYENHNEYRNSEYENN--NNEGRNY 182

Query: 182 QYQSNFEDDGYRRRRYEPTQQQGMSDTRFMENGR 211
           QYQSNFED GYRR R+EPT+QQGMSDTRFMENGR
Sbjct: 183 QYQSNFEDGGYRRSRFEPTEQQGMSDTRFMENGR 209

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BLAST of HG10005449 vs. ExPASy TrEMBL
Match: A0A6J1HVL6 (probable ATP-dependent RNA helicase ddx42 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468248 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.9e-65
Identity = 160/248 (64.52%), Postives = 179/248 (72.18%), Query Frame = 0


Query: 1   MAMAASTTFNLLFFFFFLFLLSSVQIEARVNKFFSKFVHTDHEDVLNL--PPAPVSAPPE 60
           MAMAAS TF  L F F   LLSSVQIEARVNKFFSKF+H D + VL +   PAPVS PPE
Sbjct: 1   MAMAASITFKHLPFIF--LLLSSVQIEARVNKFFSKFIHADRDVVLPVAFSPAPVSVPPE 60

Query: 61  ISPSLAPTPAPAPFFDESQNAYGLYGRDSDADENTRTITDVEEEILAGDGEEEGNHKSSY 120
           ISPSLAPTPAPAPFFDESQNAYGLYG D+D  E++RTITDVEEEILA DGE++  HKS Y
Sbjct: 61  ISPSLAPTPAPAPFFDESQNAYGLYGSDADDSESSRTITDVEEEILAEDGEDKKTHKSGY 120

Query: 121 PTTNLQTENYESPRRYEE-------YQNTNYENINGFRNSEYENNNENKNSEYE------ 180
             TNL T+N+ESP+RYE        Y+N+ YE+ N  RNSEYENNNE++NSEYE      
Sbjct: 121 -QTNLHTDNFESPKRYESRNDGNSGYRNSEYESNNDHRNSEYENNNEHRNSEYENNNEYR 180

Query: 181 -----------------SDFENNNARNYQYQSNFEDDGYRRRRYEPTQQQGMSDTRFMEN 217
                            SDFEN+  RNYQYQSN E DGYR+RRYEPT+QQGMSDTRFMEN
Sbjct: 181 NSEYENNNNEYRNTEYKSDFENSGVRNYQYQSNVEGDGYRKRRYEPTEQQGMSDTRFMEN 240

[Close]

BLAST of HG10005449 vs. ExPASy TrEMBL
Match: A0A5A7UVJ1 (Protein E6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G00270 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 6.7e-65
Identity = 153/214 (71.50%), Postives = 172/214 (80.37%), Query Frame = 0


Query: 2   AMAASTTFNLLFF-FFFLFLLSSVQIEARVNKFFSKFVHTDHEDVLN--LPPAPVSAPPE 61
           A +ASTTFN     FFFL LLSSVQ EARVNKFFSKF+HTDHE+V++  L PAP+S PPE
Sbjct: 3   AASASTTFNFNHLSFFFLLLLSSVQTEARVNKFFSKFIHTDHEEVVSNTLSPAPLSVPPE 62

Query: 62  ISPSLAPTPAPAPFFDESQNAYGLYGRDSDADENTRTITDVEEEILAGDG-EEEGNHKSS 121
            SPSLAPTPAPAPFFDESQNAYGLYG D D DEN RTITDVEEEIL G+G ++E N KS 
Sbjct: 63  TSPSLAPTPAPAPFFDESQNAYGLYGSDPDTDENPRTITDVEEEILGGEGDQDETNRKSE 122

Query: 122 YPTTN-LQTENYESPRRYEEYQNTNYENINGFRNSEYENNNENKNSEYESDFENNNARNY 181
           +P  N +QT + E     E+YQN NYE  NGFRNSEYEN+NE +NSEYE++  NN  RNY
Sbjct: 123 FPMNNFVQTRDDE-----EQYQNKNYEYNNGFRNSEYENHNEYRNSEYENN--NNEGRNY 182

Query: 182 QYQSNFEDDGYRRRRYEPTQQQGMSDTRFMENGR 211
           QYQSNFED GYRR R+EPT+QQGMSDTRFMENGR
Sbjct: 183 QYQSNFEDGGYRRSRFEPTEQQGMSDTRFMENGR 209

[Close]

BLAST of HG10005449 vs. ExPASy TrEMBL
Match: A0A5D3DDN1 (Protein E6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00230 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 8.7e-65
Identity = 153/214 (71.50%), Postives = 171/214 (79.91%), Query Frame = 0


Query: 2   AMAASTTFNLLFF-FFFLFLLSSVQIEARVNKFFSKFVHTDHEDVL--NLPPAPVSAPPE 61
           A +ASTTFN     FFFL LLSSVQ EARVNKFFSKF+HTDHE+V+   L PAP+S PPE
Sbjct: 3   AASASTTFNFNHLSFFFLLLLSSVQTEARVNKFFSKFIHTDHEEVVPNTLSPAPLSVPPE 62

Query: 62  ISPSLAPTPAPAPFFDESQNAYGLYGRDSDADENTRTITDVEEEILAGDG-EEEGNHKSS 121
            SPSLAPTPAPAPFFDESQNAYGLYG D D DEN RTITDVEEEIL G+G ++E N KS 
Sbjct: 63  TSPSLAPTPAPAPFFDESQNAYGLYGSDPDTDENPRTITDVEEEILGGEGDQDETNRKSE 122

Query: 122 YPTTN-LQTENYESPRRYEEYQNTNYENINGFRNSEYENNNENKNSEYESDFENNNARNY 181
           +P  N +QT + E     E+YQN NYE  NGFRNSEYEN+NE +NSEYE++  NN  RNY
Sbjct: 123 FPMNNFVQTRDDE-----EQYQNKNYEYNNGFRNSEYENHNEYRNSEYENN--NNEGRNY 182

Query: 182 QYQSNFEDDGYRRRRYEPTQQQGMSDTRFMENGR 211
           QYQSNFED GYRR R+EPT+QQGMSDTRFMENGR
Sbjct: 183 QYQSNFEDGGYRRSRFEPTEQQGMSDTRFMENGR 209

[Close]

BLAST of HG10005449 vs. ExPASy TrEMBL
Match: A0A0A0K1D4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G038700 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 8.7e-65
Identity = 152/217 (70.05%), Postives = 173/217 (79.72%), Query Frame = 0


Query: 2   AMAASTTF-----NLLFFFFFLFLLSSVQIEARVNKFFSKFVHTDHEDVLN-LPPAPVSA 61
           A +AS TF     +  FFFFFL L+SSVQIEARVNKFFSKF+HTDHE V N L PAP+S 
Sbjct: 3   AASASATFKFNHLSFSFFFFFLLLISSVQIEARVNKFFSKFIHTDHEVVPNTLSPAPLSV 62

Query: 62  PPEISPSLAPTPAPAPFFDESQNAYGLYGRDSDADENTRTITDVEEEILAGDG-EEEGNH 121
           PPE SPSLAPTPAPAPFFDESQNAYGLYG D DADENTRTITDVEEEIL G+G ++EGN 
Sbjct: 63  PPETSPSLAPTPAPAPFFDESQNAYGLYGSDPDADENTRTITDVEEEILGGEGDQDEGND 122

Query: 122 KSSYPTTN-LQTENYESPRRYEEYQNTNYENINGFRNSEYENNNENKNSEYESDFENNNA 181
           KS +P  N ++T N E     E+YQN NYEN NGFRNSEY+N NE +NSEYE++  NN  
Sbjct: 123 KSGFPMNNFVETRNEE-----EQYQNKNYENNNGFRNSEYDNRNEYRNSEYENN--NNEG 182

Query: 182 RNYQYQSNFEDDGYRRRRYEPTQQQGMSDTRFMENGR 211
           RNY+ Q NFE+ GYRR R+EPT+Q+GMSDTRFMENGR
Sbjct: 183 RNYEDQRNFEEGGYRRSRFEPTEQEGMSDTRFMENGR 212

[Close]

BLAST of HG10005449 vs. ExPASy TrEMBL
Match: A0A1S3C0L5 (protein E6-like OS=Cucumis melo OX=3656 GN=LOC103495646 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 8.7e-65
Identity = 153/214 (71.50%), Postives = 171/214 (79.91%), Query Frame = 0


Query: 2   AMAASTTFNLLFF-FFFLFLLSSVQIEARVNKFFSKFVHTDHEDVL--NLPPAPVSAPPE 61
           A +ASTTFN     FFFL LLSSVQ EARVNKFFSKF+HTDHE+V+   L PAP+S PPE
Sbjct: 3   AASASTTFNFNHLSFFFLLLLSSVQTEARVNKFFSKFIHTDHEEVVPNTLSPAPLSVPPE 62

Query: 62  ISPSLAPTPAPAPFFDESQNAYGLYGRDSDADENTRTITDVEEEILAGDG-EEEGNHKSS 121
            SPSLAPTPAPAPFFDESQNAYGLYG D D DEN RTITDVEEEIL G+G ++E N KS 
Sbjct: 63  TSPSLAPTPAPAPFFDESQNAYGLYGSDPDTDENPRTITDVEEEILGGEGDQDETNRKSE 122

Query: 122 YPTTN-LQTENYESPRRYEEYQNTNYENINGFRNSEYENNNENKNSEYESDFENNNARNY 181
           +P  N +QT + E     E+YQN NYE  NGFRNSEYEN+NE +NSEYE++  NN  RNY
Sbjct: 123 FPMNNFVQTRDDE-----EQYQNKNYEYNNGFRNSEYENHNEYRNSEYENN--NNEGRNY 182

Query: 182 QYQSNFEDDGYRRRRYEPTQQQGMSDTRFMENGR 211
           QYQSNFED GYRR R+EPT+QQGMSDTRFMENGR
Sbjct: 183 QYQSNFEDGGYRRSRFEPTEQQGMSDTRFMENGR 209

[Close]

BLAST of HG10005449 vs. TAIR 10
Match: AT1G28400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33850.1); Has 45374 Blast hits to 18870 proteins in 668 species: Archae - 72; Bacteria - 1460; Metazoa - 1191; Fungi - 1038; Plants - 174; Viruses - 64; Other Eukaryotes - 41375 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 4.5e-05
Identity = 77/257 (29.96%), Postives = 111/257 (43.19%), Query Frame = 0


Query: 3   MAASTTFNLLFFFFFLFLLSSVQIEARVNKFFSKFVHTDHED-----VLNLPPAPVSAPP 62
           MA ST  +LLFFF  L LLS+ QI AR + FF KF     +D      + L  +  +   
Sbjct: 1   MAFSTRGSLLFFFTTLVLLST-QIHARDSYFFGKFHRESPKDQNPNSFIPLETSEKTTVE 60

Query: 63  EISPSLAPTPAPAPFFDESQNAYGLYGRDSDADENTRTITDVEEEILAGDGEEEGNHKSS 122
           E   +         F  ES N YGLYG ++  + N     D +EE    +  +E  +  +
Sbjct: 61  ESVLNKKEQEQDPTFVPESGNGYGLYGHETTYNNN----NDNKEEFNNNNKNDEKVNSKT 120

Query: 123 YPTTNLQTENYESPRRYEEYQNTNYEN--INGFRNSEYENNN---------ENKNSEYES 182
           + T +L +E  ES   YEE      EN    G+ N E+ NNN         E  N++Y+ 
Sbjct: 121 FSTPSL-SETEESFNNYEENYPKKTENYGTKGYNNEEFNNNNNKYDANFKEEFNNNKYDE 180

Query: 183 DF--------ENNNARNYQYQSNFEDDGY----------------------RRRRYE--- 210
           ++         NNN  NY+Y  N +++ +                      R   Y+   
Sbjct: 181 NYAKEEFNNNNNNNNYNYKYDENVKEESFPENNEDNKKNVYNSNAYGTELERETPYKGYS 240

[Close]

BLAST of HG10005449 vs. TAIR 10
Match: AT2G33850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28400.1); Has 3053 Blast hits to 2119 proteins in 133 species: Archae - 6; Bacteria - 52; Metazoa - 135; Fungi - 96; Plants - 73; Viruses - 2; Other Eukaryotes - 2689 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 7.7e-05
Identity = 65/223 (29.15%), Postives = 101/223 (45.29%), Query Frame = 0


Query: 5   ASTTFNLLFFFFFLFLLSSVQIEARVNKFFSKFVHTD--HEDVLNLPPAPVSAPPEISPS 64
           A +T + LFFF    +L S QI AR +  F KF   D   ++  NL P   +   E    
Sbjct: 2   AFSTSSCLFFFLLTLVLFSTQISARNSYSFGKFQREDPKEQNPNNLVPIETNEKKE---- 61

Query: 65  LAPTPAPAPFFDESQNAYGLYGRDSDADENTRTITDVEEEILAGDGEEEGNHKSSYPTTN 124
             P      F  +S+N YGLYG ++  + N        EE+     E+  N+  S+ T +
Sbjct: 62  --PDDQNPAFIPQSENGYGLYGHETTDNNN--------EELNNNKYEDNVNYDDSFSTPS 121

Query: 125 LQ--TENYESPRRYEE-YQNTNYENINGFRNSEYENNN----ENKNSEYESDFENNNARN 184
           L    +  ES + Y+E Y  T     N    S YEN+N    + ++++    ++  + ++
Sbjct: 122 LSETAQTQESYKNYKESYPKTTEIYDNNKDTSYYENSNAYGTDKRDNDINDPYKGYSNKD 181

Query: 185 YQYQSNFEDDGYRRRRYEP--------TQQQGMSDTRFMENGR 211
             Y  N    G  +R  EP         ++QGMSDTR+M NG+
Sbjct: 182 TSYYENPNTYGTEKREKEPAYRGYNNNVERQGMSDTRYMANGK 210

The following BLAST results are available for this feature:

BLAST of HG10005449 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886989.1	2.9e-78	81.99	protein E6-like [Benincasa hispida]	[more]
XP_022969172.1	8.1e-65	64.52	probable ATP-dependent RNA helicase ddx42 isoform X2 [Cucurbita maxima]	[more]
KAA0059120.1	1.4e-64	71.50	protein E6-like [Cucumis melo var. makuwa]	[more]
XP_011659700.1	1.8e-64	70.05	protein E6 [Cucumis sativus] >KGN43470.1 hypothetical protein Csa_020541 [Cucumi...	[more]
XP_008455495.1	1.8e-64	71.50	PREDICTED: protein E6-like [Cucumis melo] >TYK21625.1 protein E6-like [Cucumis m...	[more]

BLAST of HG10005449 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10005449 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HVL6	3.9e-65	64.52	probable ATP-dependent RNA helicase ddx42 isoform X2 OS=Cucurbita maxima OX=3661...	[more]
A0A5A7UVJ1	6.7e-65	71.50	Protein E6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0027...	[more]
A0A5D3DDN1	8.7e-65	71.50	Protein E6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G0023...	[more]
A0A0A0K1D4	8.7e-65	70.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G038700 PE=4 SV=1	[more]
A0A1S3C0L5	8.7e-65	71.50	protein E6-like OS=Cucumis melo OX=3656 GN=LOC103495646 PE=4 SV=1	[more]

BLAST of HG10005449 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28400.1	4.5e-05	29.96	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G33850.1	7.7e-05	29.15	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..68
None	No IPR available	PANTHER	PTHR35274:SF5	BNAC05G02100D PROTEIN	coord: 3..210
IPR040290	Protein E6-like	PANTHER	PTHR35274	E6-LIKE PROTEIN	coord: 3..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005449.1	HG10005449.1	mRNA