HG10005442 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005442
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	translation initiation factor IF-2 isoform X1
Location	Chr07: 2630899 .. 2631663 (-)
RNA-Seq Expression	HG10005442
Synteny	HG10005442

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAAACCAACAAATACACCTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTCTTCTTCCTCCTCTTTCGCTTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCTCATGGCCGCATGCTTGTCCTGACTCGTCCCACCCCCAAACCCATCACCTCGCCGCCACCCCTTTCCCCTCAACCCCAACCTCGACCCCCATCAGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTACGGGTGGGATCGTTCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGATTACCCCTCCAGCTGTGGCGTTGCATAAACCGGAGAAATTTGTGCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGGCAGTACGGGAATTATGGGCCTCCGAGCCGGTACGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGACAGATCTGGGGGCGATGGTGAATCGGCCAAGATCCAGTGGGAATCGCCCGAGTTCTAGTGGATGGTATGCTTCTGTCAAATACTCTCTTTTTACTTTCTCTAAGTCCTTGTCAGTTAATGGGGATTATGGAGACATAAACGAGTAG

mRNA sequence

ATGGCAAAAACCAACAAATACACCTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTCTTCTTCCTCCTCTTTCGCTTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCTCATGGCCGCATGCTTGTCCTGACTCGTCCCACCCCCAAACCCATCACCTCGCCGCCACCCCTTTCCCCTCAACCCCAACCTCGACCCCCATCAGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTACGGGTGGGATCGTTCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGATTACCCCTCCAGCTGTGGCGTTGCATAAACCGGAGAAATTTGTGCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGGCAGTACGGGAATTATGGGCCTCCGAGCCGGTACGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGACAGATCTGGGGGCGATGGTGAATCGGCCAAGATCCAGTGGGAATCGCCCGAGTTCTAGTGGATGGTATGCTTCTGTCAAATACTCTCTTTTTACTTTCTCTAAGTCCTTGTCAGTTAATGGGGATTATGGAGACATAAACGAGTAG

Coding sequence (CDS)

ATGGCAAAAACCAACAAATACACCTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTCTTCTTCCTCCTCTTTCGCTTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCTCATGGCCGCATGCTTGTCCTGACTCGTCCCACCCCCAAACCCATCACCTCGCCGCCACCCCTTTCCCCTCAACCCCAACCTCGACCCCCATCAGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGTCGGACCGGTACGGGTGGGATCGTTCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGATTACCCCTCCAGCTGTGGCGTTGCATAAACCGGAGAAATTTGTGCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGGCAGTACGGGAATTATGGGCCTCCGAGCCGGTACGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGACAGATCTGGGGGCGATGGTGAATCGGCCAAGATCCAGTGGGAATCGCCCGAGTTCTAGTGGATGGTATGCTTCTGTCAAATACTCTCTTTTTACTTTCTCTAAGTCCTTGTCAGTTAATGGGGATTATGGAGACATAAACGAGTAG

Protein sequence

MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNPSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSGWYASVKYSLFTFSKSLSVNGDYGDINE

Homology

[Close]

BLAST of HG10005442 vs. NCBI nr
Match: XP_038888443.1 (translation initiation factor IF-2 isoform X1 [Benincasa hispida])

HSP 1 Score: 405.2 bits (1040), Expect = 4.1e-109
Identity = 221/236 (93.64%), Postives = 222/236 (94.07%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP------SSSSSSSFASATYSSISSPN 60
           MAKTNKYTSINFNHIYDKNLS NSKTGNNPSKNP      SSSSSSSFASATYSSISSPN
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSPNSKTGNNPSKNPSSSSSSSSSSSSSFASATYSSISSPN 60

Query: 61  KSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTR-PQSDSDSISLRPLGR 120
           KSHGRMLVLTRPTPKPITSPPPLSPQPQ RPPSADHRPVPDQTR PQSDSDSISLRPLGR
Sbjct: 61  KSHGRMLVLTRPTPKPITSPPPLSPQPQYRPPSADHRPVPDQTRPPQSDSDSISLRPLGR 120

Query: 121 TGTGGIVPSPIPSLEKDKEITPP-AVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREA 180
           TGTGGI PSPIPSLEKDKEITPP AV LHKPEKFVPPHLRAGFVGKEERPVNVGIRSREA
Sbjct: 121 TGTGGIAPSPIPSLEKDKEITPPAAVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREA 180

Query: 181 NQRQYGNYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSGW 229
           NQRQYGNYG PSRYGEDGRPKSGGGYERMKGAGE +LGAMVNRPRSSGNRPSSSGW
Sbjct: 181 NQRQYGNYGSPSRYGEDGRPKSGGGYERMKGAGEANLGAMVNRPRSSGNRPSSSGW 236

[Close]

BLAST of HG10005442 vs. NCBI nr
Match: XP_038888444.1 (putative protein TPRXL isoform X2 [Benincasa hispida])

HSP 1 Score: 401.0 bits (1029), Expect = 7.8e-108
Identity = 220/235 (93.62%), Postives = 221/235 (94.04%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP------SSSSSSSFASATYSSISSPN 60
           MAKTNKYTSINFNHIYDKNLS NSKTGNNPSKNP      SSSSSSSFASATYSSISSPN
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSPNSKTGNNPSKNPSSSSSSSSSSSSSFASATYSSISSPN 60

Query: 61  KSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTR-PQSDSDSISLRPLGR 120
           KSHGRMLVLTRPTPKPITSPPPLSPQPQ RPPSADHRPVPDQTR PQSDSDSISLRPLGR
Sbjct: 61  KSHGRMLVLTRPTPKPITSPPPLSPQPQYRPPSADHRPVPDQTRPPQSDSDSISLRPLGR 120

Query: 121 TGTGGIVPSPIPSLEKDKEITPP-AVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREA 180
           TGTGGI PSPIPSLEKDKEITPP AV LHKPEKFVPPHLRAGFVGKEERPVNVGIRSREA
Sbjct: 121 TGTGGIAPSPIPSLEKDKEITPPAAVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREA 180

Query: 181 NQRQYGNYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSG 228
           NQRQYGNYG PSRYGEDGRPKSGGGYERMKGAGE +LGAMVNRPRSSGNRPSSSG
Sbjct: 181 NQRQYGNYGSPSRYGEDGRPKSGGGYERMKGAGEANLGAMVNRPRSSGNRPSSSG 235

[Close]

BLAST of HG10005442 vs. NCBI nr
Match: XP_008455486.1 (PREDICTED: translation initiation factor IF-2 isoform X1 [Cucumis melo] >XP_008455487.1 PREDICTED: translation initiation factor IF-2 isoform X2 [Cucumis melo])

HSP 1 Score: 385.6 bits (989), Expect = 3.4e-103
Identity = 208/229 (90.83%), Postives = 211/229 (92.14%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTPKPITSP  LSPQPQ RP SADHRPVPDQ RPQSDSDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPKPITSPQVLSPQPQSRPSSADHRPVPDQPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           I PSPI  LEK++EITPP V LHKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYG
Sbjct: 121 IAPSPITGLEKNREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSG 228
           NYG  SRYGEDGRPKSGGGYERMKG GE DLGAMVNRPRSSGNRPSSSG
Sbjct: 181 NYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 229

[Close]

BLAST of HG10005442 vs. NCBI nr
Match: XP_004144518.1 (uncharacterized protein LOC101206223 [Cucumis sativus])

HSP 1 Score: 385.6 bits (989), Expect = 3.4e-103
Identity = 207/229 (90.39%), Postives = 210/229 (91.70%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTP+PITSP PLSPQPQ RP SADHRPVPD  RPQSDSDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPRPITSPQPLSPQPQSRPSSADHRPVPDHPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           I PSPIP LEKD+EITPP V LHKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYG
Sbjct: 121 IAPSPIPVLEKDREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSG 228
           NYG   RYGEDGRPKSGGGYERMK  GE DLGAMVNRPRSSGNRPSSSG
Sbjct: 181 NYGSSGRYGEDGRPKSGGGYERMKEVGEADLGAMVNRPRSSGNRPSSSG 229

[Close]

BLAST of HG10005442 vs. NCBI nr
Match: XP_022952341.1 (uncharacterized protein LOC111455051 isoform X1 [Cucurbita moschata] >KAG6572266.1 hypothetical protein SDJN03_28994, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 371.3 bits (952), Expect = 6.6e-99
Identity = 201/229 (87.77%), Postives = 208/229 (90.83%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP--SSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSIN+NHIYDK+LS NSKTGNNPSKNP  SSSSSSSFASATYSSISS NKSHG
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSFASATYSSISSANKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTPKPI+SPP LSPQPQ R PSAD RPV DQTRPQ +SDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQTRPQCESDSISLRPLGRTGTGA 120

Query: 121 IVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           I PSPIP+LEKDKEI PP V LHKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQYG
Sbjct: 121 IAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSG 228
           NYG P RYGEDGRPKSGG YERM GAGE D GAMVNRPRSSGNRP+SSG
Sbjct: 181 NYGSPGRYGEDGRPKSGGAYERMNGAGEADQGAMVNRPRSSGNRPNSSG 229

[Close]

BLAST of HG10005442 vs. ExPASy TrEMBL
Match: A0A0A0K3D7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G039270 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.4e-110
Identity = 220/252 (87.30%), Postives = 224/252 (88.89%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTP+PITSP PLSPQPQ RP SADHRPVPD  RPQSDSDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPRPITSPQPLSPQPQSRPSSADHRPVPDHPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           I PSPIP LEKD+EITPP V LHKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYG
Sbjct: 121 IAPSPIPVLEKDREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSGWYASVKYSLFT 240
           NYG   RYGEDGRPKSGGGYERMK  GE DLGAMVNRPRSSGNRPSSSGWY SVKY LF 
Sbjct: 181 NYGSSGRYGEDGRPKSGGGYERMKEVGEADLGAMVNRPRSSGNRPSSSGWYVSVKYLLFL 240

Query: 241 FSKSLSVNGDYG 251
            S S  +N D G
Sbjct: 241 NSMSWLINWDCG 252

[Close]

BLAST of HG10005442 vs. ExPASy TrEMBL
Match: A0A1S3C160 (translation initiation factor IF-2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495638 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.6e-103
Identity = 208/229 (90.83%), Postives = 211/229 (92.14%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHG
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSNKNPSSSSSSSFATATYSSISSPNKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTPKPITSP  LSPQPQ RP SADHRPVPDQ RPQSDSDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPKPITSPQVLSPQPQSRPSSADHRPVPDQPRPQSDSDSISLRPLGRTGTGA 120

Query: 121 IVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           I PSPI  LEK++EITPP V LHKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYG
Sbjct: 121 IAPSPITGLEKNREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSG 228
           NYG  SRYGEDGRPKSGGGYERMKG GE DLGAMVNRPRSSGNRPSSSG
Sbjct: 181 NYGSSSRYGEDGRPKSGGGYERMKGVGEADLGAMVNRPRSSGNRPSSSG 229

[Close]

BLAST of HG10005442 vs. ExPASy TrEMBL
Match: A0A6J1GJZ3 (uncharacterized protein LOC111455051 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455051 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 3.2e-99
Identity = 201/229 (87.77%), Postives = 208/229 (90.83%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP--SSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSIN+NHIYDK+LS NSKTGNNPSKNP  SSSSSSSFASATYSSISS NKSHG
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSFASATYSSISSANKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTPKPI+SPP LSPQPQ R PSAD RPV DQTRPQ +SDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQTRPQCESDSISLRPLGRTGTGA 120

Query: 121 IVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           I PSPIP+LEKDKEI PP V LHKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQYG
Sbjct: 121 IAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSG 228
           NYG P RYGEDGRPKSGG YERM GAGE D GAMVNRPRSSGNRP+SSG
Sbjct: 181 NYGSPGRYGEDGRPKSGGAYERMNGAGEADQGAMVNRPRSSGNRPNSSG 229

[Close]

BLAST of HG10005442 vs. ExPASy TrEMBL
Match: A0A6J1GK55 (uncharacterized protein LOC111455051 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455051 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 3.2e-99
Identity = 201/229 (87.77%), Postives = 208/229 (90.83%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP--SSSSSSSFASATYSSISSPNKSHG 60
           MAKTNKYTSIN+NHIYDK+LS NSKTGNNPSKNP  SSSSSSSFASATYSSISS NKSHG
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSFASATYSSISSANKSHG 60

Query: 61  RMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTGG 120
           RMLVLTRPTPKPI+SPP LSPQPQ R PSAD RPV DQTRPQ +SDSISLRPLGRTGTG 
Sbjct: 61  RMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQTRPQCESDSISLRPLGRTGTGA 120

Query: 121 IVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYG 180
           I PSPIP+LEKDKEI PP V LHKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQYG
Sbjct: 121 IAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYG 180

Query: 181 NYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSG 228
           NYG P RYGEDGRPKSGG YERM GAGE D GAMVNRPRSSGNRP+SSG
Sbjct: 181 NYGSPGRYGEDGRPKSGGAYERMNGAGEADQGAMVNRPRSSGNRPNSSG 229

[Close]

BLAST of HG10005442 vs. ExPASy TrEMBL
Match: A0A6J1I0F0 (uncharacterized protein LOC111468300 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468300 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.3e-97
Identity = 199/231 (86.15%), Postives = 205/231 (88.74%), Query Frame = 0


Query: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP---SSSSSSSFASATYSSISSPNKSH 60
           MAKTNKYTSIN+NHIYDK+LS NSKTGNNPSKNP   SSSSSSSFASATYSSISS NKSH
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH 60

Query: 61  GRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTRPQSDSDSISLRPLGRTGTG 120
           GRMLVLTRPTPKPI+S P LSPQPQ R PSAD RPV DQT PQ +SDSISLRPLGRTGTG
Sbjct: 61  GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG 120

Query: 121 GIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180
            I PSPIP+LEKDKEI PP V LHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY
Sbjct: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180

Query: 181 GNYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSGW 229
           GNYG P RYGEDGRPKSGG  ERM GAGE D G MVNRPRSSGNRP+SSGW
Sbjct: 181 GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSGW 231

[Close]

BLAST of HG10005442 vs. TAIR 10
Match: AT3G54680.1 (proteophosphoglycan-related )

HSP 1 Score: 112.5 bits (280), Expect = 5.1e-25
Identity = 102/235 (43.40%), Postives = 132/235 (56.17%), Query Frame = 0


Query: 5   NKYTSINFNHIYDKNLSSNSKTGNNPSKNPSSSSSSSFASATYSSISSPNKSHGRMLVLT 64
           NKYTSINFNHI  K+              PSSSSSSS  SA+YSS++   +S+GRMLVLT
Sbjct: 7   NKYTSINFNHILHKD-------------PPSSSSSSS--SASYSSVA---RSNGRMLVLT 66

Query: 65  RPTPKPITSPPPLSPQPQPRPPSADHRPVP-DQTRPQSDSDSISLRPLGRTGTGGIVPSP 124
           + +PKP+ SP          PP +    +P +Q     D   ISLRPLG TG+   +  P
Sbjct: 67  KSSPKPLRSPSAAPTTTTTAPPISTAPRIPSNQAISDPDPSQISLRPLGHTGSSSSLSFP 126

Query: 125 I--PSLEKDKEITPPA-VALH-KPEKFVPPHLRAGFVGKEERPVNVGIRSREAN---QRQ 184
           I  P + K  E+  P  V+L  KP++FVPPHLR GFV K+E+P     R R+ N    ++
Sbjct: 127 IRTPEINKAPEVNAPTPVSLSPKPDRFVPPHLRPGFVRKDEKPGLNSSRVRDPNPNLNQR 186

Query: 185 YGNYGPPSR----YGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSG 228
             N   P +    YG+ GRPKS GGYER++    TD       PR +GNRP +SG
Sbjct: 187 LPNQEQPRQEYFGYGQPGRPKS-GGYERIR----TD-------PRITGNRPGTSG 211

The following BLAST results are available for this feature:

BLAST of HG10005442 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888443.1	4.1e-109	93.64	translation initiation factor IF-2 isoform X1 [Benincasa hispida]	[more]
XP_038888444.1	7.8e-108	93.62	putative protein TPRXL isoform X2 [Benincasa hispida]	[more]
XP_008455486.1	3.4e-103	90.83	PREDICTED: translation initiation factor IF-2 isoform X1 [Cucumis melo] >XP_0084...	[more]
XP_004144518.1	3.4e-103	90.39	uncharacterized protein LOC101206223 [Cucumis sativus]	[more]
XP_022952341.1	6.6e-99	87.77	uncharacterized protein LOC111455051 isoform X1 [Cucurbita moschata] >KAG6572266...	[more]

BLAST of HG10005442 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10005442 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3D7	1.4e-110	87.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G039270 PE=4 SV=1	[more]
A0A1S3C160	1.6e-103	90.83	translation initiation factor IF-2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1GJZ3	3.2e-99	87.77	uncharacterized protein LOC111455051 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GK55	3.2e-99	87.77	uncharacterized protein LOC111455051 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I0F0	1.3e-97	86.15	uncharacterized protein LOC111468300 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of HG10005442 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54680.1	5.1e-25	43.40	proteophosphoglycan-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005442.1	HG10005442.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006413	translational initiation
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003743	translation initiation factor activity