HG10005412 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005412
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	CCR4-NOT transcription complex subunit 9-like isoform X1
Location	Chr07: 2337677 .. 2340664 (+)
RNA-Seq Expression	HG10005412
Synteny	HG10005412

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAATCTTCCCGACTCTCTGTTCGGAGAACCGTCGTCTGCAGAACCAACCACCGCGCCGGAACTCATCACTTCTCATCCTCCTCATACAGACCTAACCAAAGTCTCTGTCGATGAACTCATTCTCGCTCTCAACCACGCCCATACTCGTGAACATGCTTTGCAGCTTCTTTCTCAGGTACCCTTTATAAATGCCGATAAATTATGGAATATACTGTAATCTATCAGTTTAAGTTTTTAGGTTTAAGGGTGATTTAACATGGGTTAACGTCAGGAGATCATATTGCAGACTTTTTCTCTCTTTGGGGTCCGAGCAAAGATGGAAGAAAACCCATGAATTCTTAGTCCATTCCTAAAAACAAAGAGATCATTGTACACTTAAGACCCAAAATTTAGGTTCCAAATGAAATCTGCCCCACTTTTCAAAACATAAGTTCTTTTGACTTTTTGCTTGCTTCATCATCAGCAGAAATGGCTGAAATGATCTTATTGTGCACTCGTGTTGAGCTCTCGACTGTTACTCTCGTTACTGTACACCTTTGCAACTAATCCTTACTTTTGACTCTCGCTACCCCGGTCAAAAAACATACTTTTTAAAAACTCGGTCAAATAACATTTGGGTCTTCTAAAATGGGTCATTTGCATAAAAAACATAAATACTAAAAAACAAGTTTTTTAAAGCTATTTTTTGTGTTTTTAAATTTTGGTTTGATTTTTTAAAATATTGGTAGAAAATGTATAACAAAACAAAGAAACTTGCAGATGTAAGTAGAGTTTGTATGCTTAATTTTAAAAATCAAATGGTTATCAAAAGGAGCCTAAATTTCTGTTTCTACATTGGTTGTTGCAAAAATGTTGGGAAAGAATTGATTTAACATTAAAATCCAAGTGTTGCATTCTATTCTTTCCCCAATGATTCAAACTCTTCAGTGCAGATTTTTTGGTTTTTCTCTTCAGAATAGGAGTATGTGTGACAATTTGGCTGTTCTGATATGGCATTCCTTTGGTACTATGTTTACCCTTCTGAAGGTATGAACTCTCAATTGTGGTAATGCCTTTATAGAACAATGCCAATCTTCAGGCTGTGTGATTCCTTTTGGTTGTGTGTTGAAATTGTAGGAAATAATGGAAGTTTACTATTTGCTGTCCAAGCCTGACCTTACAGAAAAGGCTTCAACAAGAGTCTGTAATGCTCTTGCTCTTCTTCAGGTTATGATCTCACTTTTGGTGTCAGATATGAAGTTGAATGAACAAATACTGTTTTGTTTATTGGTCTACATGTCATTTAGAACATGCACCTTATCTCCATGGTTGAACTCAAAAATCAACTGTTTTCAATTTTACCTTCCTCTTACTTGTGAATCTGTGTACTTATCTTCTGCAGTGTGTGGCTTCTCACCCAGAAACAAGGGTGCCATTTATGAAAGGTAAACTCTCAGCAAAATACAATATATCTCTGACTTTATCTGTGGTTCTTTTTCCCTCATGTTCGAGGCGTTTTCTATTGGAGTTTAGGCAGTAATCAGTGGCTTCTTGAATTAGGTAGTATTGATGGTCTGAGTTTTGCTGATCCTCCCGGGCTTTTGATTGAATGTATATTATTTTGCAGCTAAGATCCCACTCTATTTGTACCCTTTCCTTAATACCACCATCAAGGAAAAACCTCATGAATATCTCAGGCTCACAAGCTTAGGAGTAATTGGTGCACTAGTGAAGGTAGTCACTGGTTTCTTTTCTTTACATTTTGTTTTCTGTTCTGGGATGAACATCAACGCTAGCTAATAAATACCATGATGGAGTGATTACTTTGAAAGGAAGTAATGAGTTCAAAGACAAAAATGACATGCTCGCACACGCGCTCGCACTCAAAGTTCTGTACCAAAGAAAAAAATTATCATTCAGTTCACTGATCAAAATCAAATTCTTTGTGTAATTACATGGTATGGTTTATTTTGTACCTATGAATTTCGAGGAAAGGTCAAACTGAAGATTTGCAATCGTTTGGCCTACTCTTCTTTCAGGTTGATGACAAGGAAGTTATTTACTTCCTACTCAAAACTGAAATAGTTCCATACTGTCTGCGATGCATGGATGTGGGGAAAGGCTTGTCAAAAACGGTGAGTACCGCAAGACGAGATCGTTAACCGAGTTCCAGATATTGCTTTCTCAATGATGTCAATCTCCTTTATTCATTTTGTTACAAGGCTGTCACTCATAATCCTAAGATCATCCAGGTTGCCACGTTTATTGTTCAGAAAATTCTAATGAATGAAGAGGGATTGAGGTACTGCTGTATCATAGCTGATCGATTTTTCGCAATAACTCGAGCCTTGGAAACAATGATGGAAAGACTTTCGGAAGAACCCTCGCAACGGCTGCTAAAACATATTGTTCGCTGTTATCTTATGCTCTCTGAAAGTCCAAGGTTAGCTAAAAGTTCTTCTAAAGGCTTTAAATACTTCATAATTTTATTGGTTTTACCATTACCTTTCATACCACACCATTGAATTTTGTGCTTGGTATTATCAATAAAGGGCTTGCCTGGGACTTGGGAGACTCCTTCCTCGGATGCTAAACGACAGCGCCTTTACCGACCTTCTTCGTGTAAGTTTTACGATGACAATGAACTTGTATTGCTATTGCTATTTGTCACCACTAATTCTCTTGAAAAATATCTCAGAAAACAGAACTTGTATTGTTTAAATATCAATCTGAGTGCCTCTTATTTGTCACTGGTTGTATAATTCTGTATTCATTCCCATCATTCAAGTTTCTTCAAGTGGTTTTTTGTTCATGTCCTCATAGTCATAGTATAGTTGCTATTATAGACATCAACTCCTTAAATCTGAAGCCTATGCAATTGTAACTGTCTTACTTGCAGGATGATCCGACTGTCATGAGCTCGTTCAAGCAGTTGCTTCGCAACGTACACGAGAATAGGTTACGAGACGATGAAAACGAACAAGGCAATCCCAAAACAGGCTGA

mRNA sequence

ATGGCCAATCTTCCCGACTCTCTGTTCGGAGAACCGTCGTCTGCAGAACCAACCACCGCGCCGGAACTCATCACTTCTCATCCTCCTCATACAGACCTAACCAAAGTCTCTGTCGATGAACTCATTCTCGCTCTCAACCACGCCCATACTCGTGAACATGCTTTGCAGCTTCTTTCTCAGAATAGGAGTATGTGTGACAATTTGGCTGTTCTGATATGGCATTCCTTTGGTACTATGTTTACCCTTCTGAAGGAAATAATGGAAGTTTACTATTTGCTGTCCAAGCCTGACCTTACAGAAAAGGCTTCAACAAGAGTCTGTAATGCTCTTGCTCTTCTTCAGTGTGTGGCTTCTCACCCAGAAACAAGGGTGCCATTTATGAAAGCTAAGATCCCACTCTATTTGTACCCTTTCCTTAATACCACCATCAAGGAAAAACCTCATGAATATCTCAGGCTCACAAGCTTAGGAGTAATTGGTGCACTAGTGAAGGTTGATGACAAGGAAGTTATTTACTTCCTACTCAAAACTGAAATAGTTCCATACTGTCTGCGATGCATGGATGTGGGGAAAGGCTTGTCAAAAACGGCTGTCACTCATAATCCTAAGATCATCCAGGTTGCCACGTTTATTGTTCAGAAAATTCTAATGAATGAAGAGGGATTGAGGTACTGCTGTATCATAGCTGATCGATTTTTCGCAATAACTCGAGCCTTGGAAACAATGATGGAAAGACTTTCGGAAGAACCCTCGCAACGGCTGCTAAAACATATTGTTCGCTGTTATCTTATGCTCTCTGAAAGTCCAAGGGCTTGCCTGGGACTTGGGAGACTCCTTCCTCGGATGCTAAACGACAGCGCCTTTACCGACCTTCTTCGTGATGATCCGACTGTCATGAGCTCGTTCAAGCAGTTGCTTCGCAACGTACACGAGAATAGGTTACGAGACGATGAAAACGAACAAGGCAATCCCAAAACAGGCTGA

Coding sequence (CDS)

ATGGCCAATCTTCCCGACTCTCTGTTCGGAGAACCGTCGTCTGCAGAACCAACCACCGCGCCGGAACTCATCACTTCTCATCCTCCTCATACAGACCTAACCAAAGTCTCTGTCGATGAACTCATTCTCGCTCTCAACCACGCCCATACTCGTGAACATGCTTTGCAGCTTCTTTCTCAGAATAGGAGTATGTGTGACAATTTGGCTGTTCTGATATGGCATTCCTTTGGTACTATGTTTACCCTTCTGAAGGAAATAATGGAAGTTTACTATTTGCTGTCCAAGCCTGACCTTACAGAAAAGGCTTCAACAAGAGTCTGTAATGCTCTTGCTCTTCTTCAGTGTGTGGCTTCTCACCCAGAAACAAGGGTGCCATTTATGAAAGCTAAGATCCCACTCTATTTGTACCCTTTCCTTAATACCACCATCAAGGAAAAACCTCATGAATATCTCAGGCTCACAAGCTTAGGAGTAATTGGTGCACTAGTGAAGGTTGATGACAAGGAAGTTATTTACTTCCTACTCAAAACTGAAATAGTTCCATACTGTCTGCGATGCATGGATGTGGGGAAAGGCTTGTCAAAAACGGCTGTCACTCATAATCCTAAGATCATCCAGGTTGCCACGTTTATTGTTCAGAAAATTCTAATGAATGAAGAGGGATTGAGGTACTGCTGTATCATAGCTGATCGATTTTTCGCAATAACTCGAGCCTTGGAAACAATGATGGAAAGACTTTCGGAAGAACCCTCGCAACGGCTGCTAAAACATATTGTTCGCTGTTATCTTATGCTCTCTGAAAGTCCAAGGGCTTGCCTGGGACTTGGGAGACTCCTTCCTCGGATGCTAAACGACAGCGCCTTTACCGACCTTCTTCGTGATGATCCGACTGTCATGAGCTCGTTCAAGCAGTTGCTTCGCAACGTACACGAGAATAGGTTACGAGACGATGAAAACGAACAAGGCAATCCCAAAACAGGCTGA

Protein sequence

MANLPDSLFGEPSSAEPTTAPELITSHPPHTDLTKVSVDELILALNHAHTREHALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYYLLSKPDLTEKASTRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTAVTHNPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMERLSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMSSFKQLLRNVHENRLRDDENEQGNPKTG

Homology

[Close]

BLAST of HG10005412 vs. NCBI nr
Match: XP_038888595.1 (cell differentiation protein rcd1 isoform X2 [Benincasa hispida])

HSP 1 Score: 592.0 bits (1525), Expect = 3.1e-165
Identity = 302/327 (92.35%), Postives = 310/327 (94.80%), Query Frame = 0


Query: 1   MANLPDSLFGEPSSAEPTTAPELITSHPPHTDLTKVSVDELILALNHAHTREHALQLLSQ 60
           MANLPDSLFGE SSAEPTTAPE + SHPPHTDL+ VSV ELILALNHAHTRE ALQLLSQ
Sbjct: 1   MANLPDSLFGESSSAEPTTAPEPVISHPPHTDLSNVSVHELILALNHAHTRERALQLLSQ 60

Query: 61  NRSMCDNLAVLIWHSFGTMFTLLKEIMEVYYLLSKPDLTEKASTRVCNALALLQCVASHP 120
           NRSMCDNLAVLIWHSFGTMFTLLKEIMEVY+LLSKPDLTEKASTRVC+ALALLQCVASHP
Sbjct: 61  NRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLSKPDLTEKASTRVCHALALLQCVASHP 120

Query: 121 ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV 180
           ETR+PFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV
Sbjct: 121 ETRMPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV 180

Query: 181 PYCLRCMDVGKGLSKTAVTHNPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALE 240
           PYCLRCMDVGKGLSKT          VATFIVQKILMNEEGLRYCCIIADRFFAITRALE
Sbjct: 181 PYCLRCMDVGKGLSKT----------VATFIVQKILMNEEGLRYCCIIADRFFAITRALE 240

Query: 241 TMMERLSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMS 300
           TMMERLSEEPSQRLLKHIVRCYL LSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMS
Sbjct: 241 TMMERLSEEPSQRLLKHIVRCYLKLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMS 300

Query: 301 SFKQLLRNVHENRLRDDENEQGNPKTG 328
           SFKQLLRNVHENRLRD+E++QGNPKTG
Sbjct: 301 SFKQLLRNVHENRLRDNESKQGNPKTG 317

[Close]

BLAST of HG10005412 vs. NCBI nr
Match: XP_038888594.1 (cell differentiation protein rcd1 isoform X1 [Benincasa hispida])

HSP 1 Score: 584.3 bits (1505), Expect = 6.4e-163
Identity = 302/336 (89.88%), Postives = 310/336 (92.26%), Query Frame = 0


Query: 1   MANLPDSLFGEPSSAEPTTAPELITSHPPHTDLTKVSVDELILALNHAHTREHALQLLS- 60
           MANLPDSLFGE SSAEPTTAPE + SHPPHTDL+ VSV ELILALNHAHTRE ALQLLS 
Sbjct: 1   MANLPDSLFGESSSAEPTTAPEPVISHPPHTDLSNVSVHELILALNHAHTRERALQLLSQ 60

Query: 61  --------QNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYYLLSKPDLTEKASTRVCNALA 120
                   QNRSMCDNLAVLIWHSFGTMFTLLKEIMEVY+LLSKPDLTEKASTRVC+ALA
Sbjct: 61  CRFFVFSLQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLSKPDLTEKASTRVCHALA 120

Query: 121 LLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVI 180
           LLQCVASHPETR+PFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVI
Sbjct: 121 LLQCVASHPETRMPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVI 180

Query: 181 YFLLKTEIVPYCLRCMDVGKGLSKTAVTHNPKIIQVATFIVQKILMNEEGLRYCCIIADR 240
           YFLLKTEIVPYCLRCMDVGKGLSKT          VATFIVQKILMNEEGLRYCCIIADR
Sbjct: 181 YFLLKTEIVPYCLRCMDVGKGLSKT----------VATFIVQKILMNEEGLRYCCIIADR 240

Query: 241 FFAITRALETMMERLSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRMLNDSAFTDL 300
           FFAITRALETMMERLSEEPSQRLLKHIVRCYL LSESPRACLGLGRLLPRMLNDSAFTDL
Sbjct: 241 FFAITRALETMMERLSEEPSQRLLKHIVRCYLKLSESPRACLGLGRLLPRMLNDSAFTDL 300

Query: 301 LRDDPTVMSSFKQLLRNVHENRLRDDENEQGNPKTG 328
           LRDDPTVMSSFKQLLRNVHENRLRD+E++QGNPKTG
Sbjct: 301 LRDDPTVMSSFKQLLRNVHENRLRDNESKQGNPKTG 326

[Close]

BLAST of HG10005412 vs. NCBI nr
Match: KAG6572285.1 (CCR4-NOT transcription complex subunit 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 564.3 bits (1453), Expect = 6.8e-157
Identity = 283/327 (86.54%), Postives = 307/327 (93.88%), Query Frame = 0


Query: 1   MANLPDSLFGEPSSAEPTTAPELITSHPPHTDLTKVSVDELILALNHAHTREHALQLLSQ 60
           MA LPDSLFGEPS+AE TTAP+  TSHPP++DL KVS+++LILAL++AHTRE ALQLLSQ
Sbjct: 1   MATLPDSLFGEPSAAERTTAPKSNTSHPPNSDLNKVSIEKLILALHNAHTRERALQLLSQ 60

Query: 61  NRSMCDNLAVLIWHSFGTMFTLLKEIMEVYYLLSKPDLTEKASTRVCNALALLQCVASHP 120
           NRS  D+LAVLIWHSFGTMFTLLKEIME+Y  LSKPDLTE+AS RVCNALALLQCVASHP
Sbjct: 61  NRSRSDDLAVLIWHSFGTMFTLLKEIMEIYPSLSKPDLTERASIRVCNALALLQCVASHP 120

Query: 121 ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV 180
           ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV
Sbjct: 121 ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV 180

Query: 181 PYCLRCMDVGKGLSKTAVTHNPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALE 240
           PYCLRCMDVGKGLSKTAVTHN  I QV+TFI+QKILM+EEGLRYCC++ADRFFAIT ALE
Sbjct: 181 PYCLRCMDVGKGLSKTAVTHNLNITQVSTFILQKILMDEEGLRYCCLVADRFFAITSALE 240

Query: 241 TMMERLSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMS 300
           TMME++SEEPSQRLLKHIVRCYL LSESPRAC GL +LLPRMLNDSAFTDLLRDDPTVMS
Sbjct: 241 TMMEKISEEPSQRLLKHIVRCYLKLSESPRACPGLAKLLPRMLNDSAFTDLLRDDPTVMS 300

Query: 301 SFKQLLRNVHENRLRDDENEQGNPKTG 328
           SF+QLLRNVHENRLR++E+E G PKTG
Sbjct: 301 SFQQLLRNVHENRLRENEDEYGTPKTG 327

[Close]

BLAST of HG10005412 vs. NCBI nr
Match: KAG7011901.1 (CCR4-NOT transcription complex subunit 9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 562.8 bits (1449), Expect = 2.0e-156
Identity = 282/327 (86.24%), Postives = 307/327 (93.88%), Query Frame = 0


Query: 1   MANLPDSLFGEPSSAEPTTAPELITSHPPHTDLTKVSVDELILALNHAHTREHALQLLSQ 60
           MA LPDSLFGEPS+AE TTAP+  TSHPP++DL KVS+++LILAL++AHTRE ALQLLSQ
Sbjct: 1   MATLPDSLFGEPSAAERTTAPKSNTSHPPNSDLNKVSIEKLILALHNAHTRERALQLLSQ 60

Query: 61  NRSMCDNLAVLIWHSFGTMFTLLKEIMEVYYLLSKPDLTEKASTRVCNALALLQCVASHP 120
           NRS  D+LAVLIWHSFGTMFTLLKEIME+Y  LSKPDLTE+AS RVCNALALLQCVASHP
Sbjct: 61  NRSRSDDLAVLIWHSFGTMFTLLKEIMEIYPSLSKPDLTERASIRVCNALALLQCVASHP 120

Query: 121 ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV 180
           ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV
Sbjct: 121 ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV 180

Query: 181 PYCLRCMDVGKGLSKTAVTHNPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALE 240
           PYCLRCMDVGKGLSKTAVTHN  I QV+TFI+QKILM+EEGLRYCC++ADRFFAIT ALE
Sbjct: 181 PYCLRCMDVGKGLSKTAVTHNLNITQVSTFILQKILMDEEGLRYCCLVADRFFAITSALE 240

Query: 241 TMMERLSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMS 300
           TMME++SEEPSQRLLKHIVRCYL LSESPRAC GL +LLPRMLNDSAFTDLLRDDPTVMS
Sbjct: 241 TMMEKISEEPSQRLLKHIVRCYLKLSESPRACPGLAKLLPRMLNDSAFTDLLRDDPTVMS 300

Query: 301 SFKQLLRNVHENRLRDDENEQGNPKTG 328
           SF+QLLRNVHENRLR++E+E G PK+G
Sbjct: 301 SFQQLLRNVHENRLRENEDEYGTPKSG 327

[Close]

BLAST of HG10005412 vs. NCBI nr
Match: TYK07119.1 (cell differentiation protein rcd1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 553.9 bits (1426), Expect = 9.2e-154
Identity = 284/314 (90.45%), Postives = 293/314 (93.31%), Query Frame = 0


Query: 1   MANLPDSLFGEPSSAEPTTAPELITSHPPHTDLTKVSVDELILALNHAHTREHALQLLSQ 60
           MANLPDSLFGEP++A    APE I SHPPHTDLT V V ELILALNHA TRE AL LLSQ
Sbjct: 1   MANLPDSLFGEPTTA---PAPEPIASHPPHTDLTNVPVHELILALNHARTRERALHLLSQ 60

Query: 61  NRSMCDNLAVLIWHSFGTMFTLLKEIMEVYYLLSKPDLTEKASTRVCNALALLQCVASHP 120
            RSM DNLAVLIWHSFGTMFTLLKEIM+VY+LLSKP+LTEKASTRVCNALALLQCVASHP
Sbjct: 61  KRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHLLSKPELTEKASTRVCNALALLQCVASHP 120

Query: 121 ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV 180
           ETRVPFMKA+IPLYLYPFLNTTIKEKPHE LRLT LGVIGALVKV+DKEVIYFLLKTEIV
Sbjct: 121 ETRVPFMKAEIPLYLYPFLNTTIKEKPHECLRLTCLGVIGALVKVNDKEVIYFLLKTEIV 180

Query: 181 PYCLRCMDVGKGLSKTAVTHNPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALE 240
           PYCLRCMDVGKGLSKT+VTH PKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALE
Sbjct: 181 PYCLRCMDVGKGLSKTSVTHYPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALE 240

Query: 241 TMMERLSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMS 300
           TMME LSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRML+ SAFTDLL DDPTVMS
Sbjct: 241 TMMETLSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRMLSHSAFTDLLHDDPTVMS 300

Query: 301 SFKQLLRNVHENRL 315
           SFKQLLR VHENRL
Sbjct: 301 SFKQLLRKVHENRL 311

[Close]

BLAST of HG10005412 vs. ExPASy Swiss-Prot
Match: Q92600 (CCR4-NOT transcription complex subunit 9 OS=Homo sapiens OX=9606 GN=CNOT9 PE=1 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.7e-73
Identity = 153/297 (51.52%), Postives = 199/297 (67.00%), Query Frame = 0


Query: 23  LITSHPPHTDLTKVSVDEL---ILALNHAHTREHALQLLSQNRSMCDNLAVLIWHSFGTM 82
           L T+ P  T L +V  +++   I  L+   TRE+AL  LS+ R    +LA ++WHSFGT+
Sbjct: 4   LATAAPVPTTLAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTI 63

Query: 83  FTLLKEIMEVYYLLSKPDLTEKASTRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFL 142
             LL+EI+ +Y  ++ P LT   S RVCNALALLQCVASHPETR  F+ A IPL+LYPFL
Sbjct: 64  AALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFL 123

Query: 143 NTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTAVT 202
           +T  K +P EYLRLTSLGVIGALVK D++EVI FLL TEI+P CLR M+ G  LSKT   
Sbjct: 124 HTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT--- 183

Query: 203 HNPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMERLSEEPSQRLLKHIV 262
                  VATFI+QKIL+++ GL Y C   +RF  +   L  M+ +LS+EPS RLLKH+V
Sbjct: 184 -------VATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVV 243

Query: 263 RCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMSSFKQLLRNVHENRLRD 317
           RCYL LS++PRA   L + LP  L D+ F  +L+DD T      QL++N+ E ++ D
Sbjct: 244 RCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTD 290

[Close]

BLAST of HG10005412 vs. ExPASy Swiss-Prot
Match: Q5R6Z6 (CCR4-NOT transcription complex subunit 9 OS=Pongo abelii OX=9601 GN=CNOT9 PE=2 SV=2)

HSP 1 Score: 277.7 bits (709), Expect = 1.7e-73
Identity = 153/297 (51.52%), Postives = 199/297 (67.00%), Query Frame = 0


Query: 23  LITSHPPHTDLTKVSVDEL---ILALNHAHTREHALQLLSQNRSMCDNLAVLIWHSFGTM 82
           L T+ P  T L +V  +++   I  L+   TRE+AL  LS+ R    +LA ++WHSFGT+
Sbjct: 4   LATAAPVPTTLAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTI 63

Query: 83  FTLLKEIMEVYYLLSKPDLTEKASTRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFL 142
             LL+EI+ +Y  ++ P LT   S RVCNALALLQCVASHPETR  F+ A IPL+LYPFL
Sbjct: 64  AALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFL 123

Query: 143 NTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTAVT 202
           +T  K +P EYLRLTSLGVIGALVK D++EVI FLL TEI+P CLR M+ G  LSKT   
Sbjct: 124 HTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT--- 183

Query: 203 HNPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMERLSEEPSQRLLKHIV 262
                  VATFI+QKIL+++ GL Y C   +RF  +   L  M+ +LS+EPS RLLKH+V
Sbjct: 184 -------VATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVV 243

Query: 263 RCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMSSFKQLLRNVHENRLRD 317
           RCYL LS++PRA   L + LP  L D+ F  +L+DD T      QL++N+ E ++ D
Sbjct: 244 RCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTD 290

[Close]

BLAST of HG10005412 vs. ExPASy Swiss-Prot
Match: A7MB47 (CCR4-NOT transcription complex subunit 9 OS=Bos taurus OX=9913 GN=CNOT9 PE=2 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.2e-73
Identity = 153/297 (51.52%), Postives = 199/297 (67.00%), Query Frame = 0


Query: 23  LITSHPPHTDLTKVSVDEL---ILALNHAHTREHALQLLSQNRSMCDNLAVLIWHSFGTM 82
           L T+ P  T L +V  +++   I  L+   TRE+AL  LS+ R    +LA ++WHSFGT+
Sbjct: 4   LATAAPVPTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTI 63

Query: 83  FTLLKEIMEVYYLLSKPDLTEKASTRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFL 142
             LL+EI+ +Y  ++ P LT   S RVCNALALLQCVASHPETR  F+ A IPL+LYPFL
Sbjct: 64  AALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFL 123

Query: 143 NTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTAVT 202
           +T  K +P EYLRLTSLGVIGALVK D++EVI FLL TEI+P CLR M+ G  LSKT   
Sbjct: 124 HTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT--- 183

Query: 203 HNPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMERLSEEPSQRLLKHIV 262
                  VATFI+QKIL+++ GL Y C   +RF  +   L  M+ +LS+EPS RLLKH+V
Sbjct: 184 -------VATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVV 243

Query: 263 RCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMSSFKQLLRNVHENRLRD 317
           RCYL LS++PRA   L + LP  L D+ F  +L+DD T      QL++N+ E ++ D
Sbjct: 244 RCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTD 290

[Close]

BLAST of HG10005412 vs. ExPASy Swiss-Prot
Match: Q4R347 (CCR4-NOT transcription complex subunit 9 OS=Macaca fascicularis OX=9541 GN=CNOT9 PE=2 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.2e-73
Identity = 153/297 (51.52%), Postives = 199/297 (67.00%), Query Frame = 0


Query: 23  LITSHPPHTDLTKVSVDEL---ILALNHAHTREHALQLLSQNRSMCDNLAVLIWHSFGTM 82
           L T+ P  T L +V  +++   I  L+   TRE+AL  LS+ R    +LA ++WHSFGT+
Sbjct: 4   LATAAPVPTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTI 63

Query: 83  FTLLKEIMEVYYLLSKPDLTEKASTRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFL 142
             LL+EI+ +Y  ++ P LT   S RVCNALALLQCVASHPETR  F+ A IPL+LYPFL
Sbjct: 64  AALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFL 123

Query: 143 NTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTAVT 202
           +T  K +P EYLRLTSLGVIGALVK D++EVI FLL TEI+P CLR M+ G  LSKT   
Sbjct: 124 HTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT--- 183

Query: 203 HNPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMERLSEEPSQRLLKHIV 262
                  VATFI+QKIL+++ GL Y C   +RF  +   L  M+ +LS+EPS RLLKH+V
Sbjct: 184 -------VATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVV 243

Query: 263 RCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMSSFKQLLRNVHENRLRD 317
           RCYL LS++PRA   L + LP  L D+ F  +L+DD T      QL++N+ E ++ D
Sbjct: 244 RCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTD 290

[Close]

BLAST of HG10005412 vs. ExPASy Swiss-Prot
Match: Q9JKY0 (CCR4-NOT transcription complex subunit 9 OS=Mus musculus OX=10090 GN=Cnot9 PE=1 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.2e-73
Identity = 153/297 (51.52%), Postives = 199/297 (67.00%), Query Frame = 0


Query: 23  LITSHPPHTDLTKVSVDEL---ILALNHAHTREHALQLLSQNRSMCDNLAVLIWHSFGTM 82
           L T+ P  T L +V  +++   I  L+   TRE+AL  LS+ R    +LA ++WHSFGT+
Sbjct: 4   LATAAPVPTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTI 63

Query: 83  FTLLKEIMEVYYLLSKPDLTEKASTRVCNALALLQCVASHPETRVPFMKAKIPLYLYPFL 142
             LL+EI+ +Y  ++ P LT   S RVCNALALLQCVASHPETR  F+ A IPL+LYPFL
Sbjct: 64  AALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFL 123

Query: 143 NTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTAVT 202
           +T  K +P EYLRLTSLGVIGALVK D++EVI FLL TEI+P CLR M+ G  LSKT   
Sbjct: 124 HTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT--- 183

Query: 203 HNPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMERLSEEPSQRLLKHIV 262
                  VATFI+QKIL+++ GL Y C   +RF  +   L  M+ +LS+EPS RLLKH+V
Sbjct: 184 -------VATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVV 243

Query: 263 RCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMSSFKQLLRNVHENRLRD 317
           RCYL LS++PRA   L + LP  L D+ F  +L+DD T      QL++N+ E ++ D
Sbjct: 244 RCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTD 290

[Close]

BLAST of HG10005412 vs. ExPASy TrEMBL
Match: A0A5D3C9W8 (Cell differentiation protein rcd1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004400 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.5e-154
Identity = 284/314 (90.45%), Postives = 293/314 (93.31%), Query Frame = 0


Query: 1   MANLPDSLFGEPSSAEPTTAPELITSHPPHTDLTKVSVDELILALNHAHTREHALQLLSQ 60
           MANLPDSLFGEP++A    APE I SHPPHTDLT V V ELILALNHA TRE AL LLSQ
Sbjct: 1   MANLPDSLFGEPTTA---PAPEPIASHPPHTDLTNVPVHELILALNHARTRERALHLLSQ 60

Query: 61  NRSMCDNLAVLIWHSFGTMFTLLKEIMEVYYLLSKPDLTEKASTRVCNALALLQCVASHP 120
            RSM DNLAVLIWHSFGTMFTLLKEIM+VY+LLSKP+LTEKASTRVCNALALLQCVASHP
Sbjct: 61  KRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHLLSKPELTEKASTRVCNALALLQCVASHP 120

Query: 121 ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV 180
           ETRVPFMKA+IPLYLYPFLNTTIKEKPHE LRLT LGVIGALVKV+DKEVIYFLLKTEIV
Sbjct: 121 ETRVPFMKAEIPLYLYPFLNTTIKEKPHECLRLTCLGVIGALVKVNDKEVIYFLLKTEIV 180

Query: 181 PYCLRCMDVGKGLSKTAVTHNPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALE 240
           PYCLRCMDVGKGLSKT+VTH PKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALE
Sbjct: 181 PYCLRCMDVGKGLSKTSVTHYPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALE 240

Query: 241 TMMERLSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMS 300
           TMME LSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRML+ SAFTDLL DDPTVMS
Sbjct: 241 TMMETLSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRMLSHSAFTDLLHDDPTVMS 300

Query: 301 SFKQLLRNVHENRL 315
           SFKQLLR VHENRL
Sbjct: 301 SFKQLLRKVHENRL 311

[Close]

BLAST of HG10005412 vs. ExPASy TrEMBL
Match: A0A6J1GLF6 (CCR4-NOT transcription complex subunit 9-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111455057 PE=4 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 2.3e-150
Identity = 275/326 (84.36%), Postives = 299/326 (91.72%), Query Frame = 0


Query: 1   MANLPDSLFGEPSSAEPTTAPELITSHPPHTDLTKVSVDELILALNHAHTREHALQLLSQ 60
           MA LPDSLFGEPS+AE TTAP+  TSHPP++DL KVS+++LILAL++AHTRE ALQLLSQ
Sbjct: 1   MATLPDSLFGEPSAAERTTAPKSNTSHPPNSDLNKVSIEKLILALHNAHTRERALQLLSQ 60

Query: 61  NRSMCDNLAVLIWHSFGTMFTLLKEIMEVYYLLSKPDLTEKASTRVCNALALLQCVASHP 120
           NRS  D+LAVLIWHSFGTMFTLLKEIME+Y  LSKPDLTE+AS RVCNALALLQCVASHP
Sbjct: 61  NRSRSDDLAVLIWHSFGTMFTLLKEIMEIYPSLSKPDLTERASIRVCNALALLQCVASHP 120

Query: 121 ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV 180
           ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV
Sbjct: 121 ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV 180

Query: 181 PYCLRCMDVGKGLSKTAVTHNPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALE 240
           PYCLRCMDVGKGLSKT          V+TFI+QKILM+EEGLRYCC++ADRFFAIT ALE
Sbjct: 181 PYCLRCMDVGKGLSKT----------VSTFILQKILMDEEGLRYCCLVADRFFAITSALE 240

Query: 241 TMMERLSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMS 300
           TMME++SEEPSQRLLKHIVRCYL LSESPRAC GL +LLPRMLNDSAFTDLLRDDPTVMS
Sbjct: 241 TMMEKISEEPSQRLLKHIVRCYLKLSESPRACPGLAKLLPRMLNDSAFTDLLRDDPTVMS 300

Query: 301 SFKQLLRNVHENRLRDDENEQGNPKT 327
           SF+QLLRNVHENRLR++E+E G PKT
Sbjct: 301 SFQQLLRNVHENRLRENEDEYGTPKT 316

[Close]

BLAST of HG10005412 vs. ExPASy TrEMBL
Match: A0A6J1GK58 (CCR4-NOT transcription complex subunit 9-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455057 PE=4 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 2.3e-150
Identity = 275/326 (84.36%), Postives = 299/326 (91.72%), Query Frame = 0


Query: 1   MANLPDSLFGEPSSAEPTTAPELITSHPPHTDLTKVSVDELILALNHAHTREHALQLLSQ 60
           MA LPDSLFGEPS+AE TTAP+  TSHPP++DL KVS+++LILAL++AHTRE ALQLLSQ
Sbjct: 1   MATLPDSLFGEPSAAERTTAPKSNTSHPPNSDLNKVSIEKLILALHNAHTRERALQLLSQ 60

Query: 61  NRSMCDNLAVLIWHSFGTMFTLLKEIMEVYYLLSKPDLTEKASTRVCNALALLQCVASHP 120
           NRS  D+LAVLIWHSFGTMFTLLKEIME+Y  LSKPDLTE+AS RVCNALALLQCVASHP
Sbjct: 61  NRSRSDDLAVLIWHSFGTMFTLLKEIMEIYPSLSKPDLTERASIRVCNALALLQCVASHP 120

Query: 121 ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV 180
           ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV
Sbjct: 121 ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV 180

Query: 181 PYCLRCMDVGKGLSKTAVTHNPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALE 240
           PYCLRCMDVGKGLSKT          V+TFI+QKILM+EEGLRYCC++ADRFFAIT ALE
Sbjct: 181 PYCLRCMDVGKGLSKT----------VSTFILQKILMDEEGLRYCCLVADRFFAITSALE 240

Query: 241 TMMERLSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMS 300
           TMME++SEEPSQRLLKHIVRCYL LSESPRAC GL +LLPRMLNDSAFTDLLRDDPTVMS
Sbjct: 241 TMMEKISEEPSQRLLKHIVRCYLKLSESPRACPGLAKLLPRMLNDSAFTDLLRDDPTVMS 300

Query: 301 SFKQLLRNVHENRLRDDENEQGNPKT 327
           SF+QLLRNVHENRLR++E+E G PKT
Sbjct: 301 SFQQLLRNVHENRLRENEDEYGTPKT 316

[Close]

BLAST of HG10005412 vs. ExPASy TrEMBL
Match: A0A6J1HZ65 (CCR4-NOT transcription complex subunit 9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468239 PE=4 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 2.5e-149
Identity = 273/326 (83.74%), Postives = 298/326 (91.41%), Query Frame = 0


Query: 1   MANLPDSLFGEPSSAEPTTAPELITSHPPHTDLTKVSVDELILALNHAHTREHALQLLSQ 60
           MA LPDSLFGEPS+AE TTAP+  TSHPP++DL KVS+++LILAL++AHTRE ALQLLSQ
Sbjct: 1   MATLPDSLFGEPSAAERTTAPKSNTSHPPNSDLNKVSIEKLILALHNAHTRERALQLLSQ 60

Query: 61  NRSMCDNLAVLIWHSFGTMFTLLKEIMEVYYLLSKPDLTEKASTRVCNALALLQCVASHP 120
           NRS  D+LAVLIWHSFGTMFTLLKEIME+Y  LSKPDLTE+AS RVCNALALLQCVASHP
Sbjct: 61  NRSRSDDLAVLIWHSFGTMFTLLKEIMEIYPSLSKPDLTERASIRVCNALALLQCVASHP 120

Query: 121 ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV 180
           ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV
Sbjct: 121 ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV 180

Query: 181 PYCLRCMDVGKGLSKTAVTHNPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALE 240
           PYCLRCMDVGKGLSKT          V+TFI+QKILM+EEGLRYCC++ADRFFAIT ALE
Sbjct: 181 PYCLRCMDVGKGLSKT----------VSTFILQKILMDEEGLRYCCLVADRFFAITSALE 240

Query: 241 TMMERLSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMS 300
           TMME++S+EPSQRLLKHIVRCYL LSESPRAC GL +LLP+MLNDSAFTDLLRDDPTVMS
Sbjct: 241 TMMEKISDEPSQRLLKHIVRCYLKLSESPRACPGLAKLLPQMLNDSAFTDLLRDDPTVMS 300

Query: 301 SFKQLLRNVHENRLRDDENEQGNPKT 327
           SF QLLRNVHENRLR++E+E G PKT
Sbjct: 301 SFHQLLRNVHENRLRENEDEYGTPKT 316

[Close]

BLAST of HG10005412 vs. ExPASy TrEMBL
Match: A0A1S3C1N6 (cell differentiation protein rcd1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495613 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.7e-148
Identity = 278/314 (88.54%), Postives = 286/314 (91.08%), Query Frame = 0


Query: 1   MANLPDSLFGEPSSAEPTTAPELITSHPPHTDLTKVSVDELILALNHAHTREHALQLLSQ 60
           MANLPDSLFGEP++A    APE I SHPPHTDLT V VDELILALNHA TRE AL LLSQ
Sbjct: 1   MANLPDSLFGEPTTA---PAPEPIASHPPHTDLTNVPVDELILALNHARTRERALHLLSQ 60

Query: 61  NRSMCDNLAVLIWHSFGTMFTLLKEIMEVYYLLSKPDLTEKASTRVCNALALLQCVASHP 120
            RSM DNLAVLIWHSFGTMFTLLKEIM+VY+LLSKP+LTEKASTRVCNALALLQCVASHP
Sbjct: 61  KRSMFDNLAVLIWHSFGTMFTLLKEIMDVYHLLSKPELTEKASTRVCNALALLQCVASHP 120

Query: 121 ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV 180
           ETRVPFMKA+IPLYLYPFLNTTIKEKPHE LRLTSLGVIGALVKV+DKEVIYFLLKTEIV
Sbjct: 121 ETRVPFMKAEIPLYLYPFLNTTIKEKPHECLRLTSLGVIGALVKVNDKEVIYFLLKTEIV 180

Query: 181 PYCLRCMDVGKGLSKTAVTHNPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALE 240
           PYCLRCMDVGKGLSKT          VATFIVQKILMNEEGLRYCCIIADRFFAITRALE
Sbjct: 181 PYCLRCMDVGKGLSKT----------VATFIVQKILMNEEGLRYCCIIADRFFAITRALE 240

Query: 241 TMMERLSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMS 300
           TMME LSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRML+ SAFTDLL DDPTVMS
Sbjct: 241 TMMETLSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRMLSHSAFTDLLHDDPTVMS 300

Query: 301 SFKQLLRNVHENRL 315
           SFKQLLR VHENRL
Sbjct: 301 SFKQLLRKVHENRL 301

[Close]

BLAST of HG10005412 vs. TAIR 10
Match: AT3G20800.1 (Cell differentiation, Rcd1-like protein )

HSP 1 Score: 317.0 bits (811), Expect = 1.8e-86
Identity = 169/314 (53.82%), Postives = 218/314 (69.43%), Query Frame = 0


Query: 1   MANLPDSLFGEPSSAEPTTAPELITSHPPHTDLTKVSVDELILALNHAHTREHALQLLSQ 60
           MANLP SL        P+T+ +  T  P + D    S ++L+L L++   RE+AL  LS+
Sbjct: 1   MANLPSSLSMGTPFGGPSTSAQNPTGAPANKDRNLASAEQLVLDLSNPELRENALLELSK 60

Query: 61  NRSMCDNLAVLIWHSFGTMFTLLKEIMEVYYLLSKPDLTEKASTRVCNALALLQCVASHP 120
            R +  +LA L+W+SFGT+  LL+EI+ +Y +L+ P+LT   S RVCN+LALLQCVASH 
Sbjct: 61  KRELFQDLAPLLWNSFGTIAALLQEIVSIYSVLAPPNLTPAQSNRVCNSLALLQCVASHS 120

Query: 121 ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV 180
           +TR+ F+KA IPLYLYPFLNTT K +P EYLRLTSLGVIGALVKVDD EVI FLL TEI+
Sbjct: 121 DTRMLFLKAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180

Query: 181 PYCLRCMDVGKGLSKTAVTHNPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALE 240
           P CLR M++G  LSKT          VATFIVQKIL+++ G+ Y C  A+RFFA+ R L 
Sbjct: 181 PLCLRTMEMGSELSKT----------VATFIVQKILLDDVGMDYICTTAERFFAVGRVLG 240

Query: 241 TMMERLSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMS 300
            M++ L E+PS RLLKHI+RCYL LS++PRAC  L   LP  L D +F++ LR+DPT   
Sbjct: 241 NMVQSLVEQPSPRLLKHIIRCYLRLSDNPRACAALASCLPDSLRDGSFSNCLREDPTARR 300

Query: 301 SFKQLLRNVHENRL 315
             +QL+ NV   R+
Sbjct: 301 WLQQLVHNVGVGRV 304

[Close]

BLAST of HG10005412 vs. TAIR 10
Match: AT5G12980.1 (Cell differentiation, Rcd1-like protein )

HSP 1 Score: 300.4 bits (768), Expect = 1.7e-81
Identity = 167/310 (53.87%), Postives = 210/310 (67.74%), Query Frame = 0


Query: 1   MANLPDSLFGEPSSAEPTTAPELITSHPPHTDLTKVSVDELILALNHAHTREHALQLLSQ 60
           MANLP  L  +  +    ++P    S   + D    S ++LIL L++   RE+AL  LS+
Sbjct: 1   MANLPPPLSMKSVALSGASSP----SSSSNNDRKLSSAEQLILDLSNPELRENALHELSK 60

Query: 61  NRSMCDNLAVLIWHSFGTMFTLLKEIMEVYYLLSKPDLTEKASTRVCNALALLQCVASHP 120
            R +  +LA L+WHS GT+  LL+EI+ VY  LS P +T   S RVCNALALLQCVASH 
Sbjct: 61  KREIFQDLAPLLWHSVGTIPALLQEIIAVYPALSPPTMTPAQSNRVCNALALLQCVASHT 120

Query: 121 ETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIV 180
           +TR+ F+KA +PLYLY FLNT+ K +P EYLRLTSLGVIGALVKVDD EVI FLL+TEIV
Sbjct: 121 DTRMLFLKAHLPLYLYAFLNTSSKSRPFEYLRLTSLGVIGALVKVDDTEVIRFLLQTEIV 180

Query: 181 PYCLRCMDVGKGLSKTAVTHNPKIIQVATFIVQKILMNEEGLRYCCIIADRFFAITRALE 240
           P CLR M+ G  LSKT          VATFIVQK+L+++ GL Y C  A+RFFA+ R L 
Sbjct: 181 PLCLRTMENGSELSKT----------VATFIVQKVLLDDVGLEYMCTTAERFFALGRVLG 240

Query: 241 TMMERLSEEPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRMLNDSAFTDLLRDDPTVMS 300
            M+  L+E PS RLLKHI+RCYL L+++PRAC  LG  LP +L D+ F+  L DDP  M 
Sbjct: 241 NMVTSLAEGPSARLLKHIIRCYLRLTDNPRACDALGSCLPDLLRDATFSGCLYDDPPAMQ 296

Query: 301 SFKQLLRNVH 311
             +QLL NV+
Sbjct: 301 WLQQLLHNVN 296

[Close]

BLAST of HG10005412 vs. TAIR 10
Match: AT2G32550.1 (Cell differentiation, Rcd1-like protein )

HSP 1 Score: 152.9 bits (385), Expect = 4.4e-37
Identity = 101/326 (30.98%), Postives = 172/326 (52.76%), Query Frame = 0


Query: 1   MANLPDSLFGEPSS---AEPTTAPELITSHPPHTDLTKVSVDELILA------LNHAHTR 60
           M NLPDSL+ + S      P+ A    ++ PP   +      E+I+          ++  
Sbjct: 5   MVNLPDSLYEDYSKLKLTSPSNASSSSSAPPPRLSVVAHPTVEMIIQWVCDIHKPKSYMS 64

Query: 61  EHALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVY-YLLSKPDLT----EKASTRV 120
           + AL  L+ +R+  + L  L+W S  T++ +L+E+ E Y +L     L          RV
Sbjct: 65  DFALHNLAYHRNDFEFLPSLLWESKNTVYIMLQEVFEAYRHLAGHISLRLFPHPLNPLRV 124

Query: 121 CNALALLQCVASHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKV- 180
            N   L Q +A HP+T   F++AK+P Y YP ++T + +K  E +RL +LGVI  ++K  
Sbjct: 125 YNVFLLFQSMACHPDTSRQFLRAKMPNYFYPLMDTGLIDKSDECMRLAALGVIAHMLKAS 184

Query: 181 DDKEVIYFLLKTEIVPYCLRCMDVGKGLSKTAVTHNPKIIQVATFIVQKILMNEEGLRYC 240
           +D  V  +L+++ +V +C++ ++ G   +K          +VA +I+ KI+  ++GL YC
Sbjct: 185 EDGAVNRYLMESGVVGFCVKPIEFGSTETK----------KVALYILDKIMSTDQGLYYC 244

Query: 241 CIIADRFFAITRALETMMERLSE--EPSQRLLKHIVRCYLMLSESPRACLGLGRLLPRML 300
           C++ADRF+ I   L+ ++  LS    P   L   +  CY+ LS++ RA  G+ R  P +L
Sbjct: 245 CVLADRFYVIDELLKKVLFYLSNMVRPPSSLFSLVTGCYVKLSQNSRARNGIRRYTPFLL 304

Query: 301 NDSAFTDLLRDDPTVMSSFKQLLRNV 310
            D  F+ L  +DP   ++  QLL+N+
Sbjct: 305 FDGTFSRLYAEDPVAANNRIQLLQNL 320

The following BLAST results are available for this feature:

BLAST of HG10005412 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888595.1	3.1e-165	92.35	cell differentiation protein rcd1 isoform X2 [Benincasa hispida]	[more]
XP_038888594.1	6.4e-163	89.88	cell differentiation protein rcd1 isoform X1 [Benincasa hispida]	[more]
KAG6572285.1	6.8e-157	86.54	CCR4-NOT transcription complex subunit 9, partial [Cucurbita argyrosperma subsp....	[more]
KAG7011901.1	2.0e-156	86.24	CCR4-NOT transcription complex subunit 9 [Cucurbita argyrosperma subsp. argyrosp...	[more]
TYK07119.1	9.2e-154	90.45	cell differentiation protein rcd1 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of HG10005412 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q92600	1.7e-73	51.52	CCR4-NOT transcription complex subunit 9 OS=Homo sapiens OX=9606 GN=CNOT9 PE=1 S...	[more]
Q5R6Z6	1.7e-73	51.52	CCR4-NOT transcription complex subunit 9 OS=Pongo abelii OX=9601 GN=CNOT9 PE=2 S...	[more]
A7MB47	2.2e-73	51.52	CCR4-NOT transcription complex subunit 9 OS=Bos taurus OX=9913 GN=CNOT9 PE=2 SV=...	[more]
Q4R347	2.2e-73	51.52	CCR4-NOT transcription complex subunit 9 OS=Macaca fascicularis OX=9541 GN=CNOT9...	[more]
Q9JKY0	2.2e-73	51.52	CCR4-NOT transcription complex subunit 9 OS=Mus musculus OX=10090 GN=Cnot9 PE=1 ...	[more]

BLAST of HG10005412 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C9W8	4.5e-154	90.45	Cell differentiation protein rcd1 isoform X1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1GLF6	2.3e-150	84.36	CCR4-NOT transcription complex subunit 9-like isoform X3 OS=Cucurbita moschata O...	[more]
A0A6J1GK58	2.3e-150	84.36	CCR4-NOT transcription complex subunit 9-like isoform X1 OS=Cucurbita moschata O...	[more]
A0A6J1HZ65	2.5e-149	83.74	CCR4-NOT transcription complex subunit 9-like isoform X1 OS=Cucurbita maxima OX=...	[more]
A0A1S3C1N6	3.7e-148	88.54	cell differentiation protein rcd1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]

BLAST of HG10005412 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20800.1	1.8e-86	53.82	Cell differentiation, Rcd1-like protein	[more]
AT5G12980.1	1.7e-81	53.87	Cell differentiation, Rcd1-like protein	[more]
AT2G32550.1	4.4e-37	30.98	Cell differentiation, Rcd1-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF04078	Rcd1	coord: 41..309 e-value: 6.8E-103 score: 343.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR12262	UNCHARACTERIZED	coord: 2..311
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 35..314 e-value: 1.3E-116 score: 390.4
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 89..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005412.1	HG10005412.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017148	negative regulation of translation
cellular_component	GO:0030015	CCR4-NOT core complex
cellular_component	GO:0000932	P-body