HG10005392 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005392
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Hexokinase-1 protein
Location	Chr07: 2060493 .. 2063671 (+)
RNA-Seq Expression	HG10005392
Synteny	HG10005392

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGAAGCAAGTCCTGTGAGAAGGAGAGAAAGTCCATGGGGGATGCCGGAGGGAGAGGATCGGCAACCTAAGCCTCACAGATGCAATGACAGAGTTGAGGATGTTATCCAAGTAAACTTTCACTTCTTTAATTTTTCTCTGTTTATCAGCATCGTTCGCGTTCTTTTCCACATTATTACATCTACTCTTCTTCTTGTTTATTCTGATCTCAATTTGTTTCTAATGGACGGATTTGAAAAATTGATATCGAAATGATTCCGGAGTTTGTCGTCGCTAGGTAGGAATAGGATGCGATTTATTTCAATGATCTCTTGAGTCGACATTAAGTATTCTCTTCAACGTTCAATTTCCTGAAGGAATTGGATTATCATGTGCTTTTCCTGTGGATTTTGGTTGTACATGATATCGCTGAGAACTTTAGGAGTGAATCTGAGAAGTTGGAAGCAAGCTGGATGGAGTTTTGCTGACTATAATCGTAGAAATTAAGGCCGCTAGTTATTACGGAGCTTATTAACATCTCGTTAAGTTAACAGAAAAATCACTGGAAAGATAATTTCAATATTTTAAGTAGCATTGAGGTTAATTTGTTGAAATTTTGAACGAATTGAATGGCCTAGGAGATCGGGAGCTATTGCGCTAACTGTAAATGATTGTTCTGTTGGAGGTTCTTTTATCATTTGAGTATTCAGTGAATTTTACTCTTCAAAGTAAAGCTTTCAGCGTACTATTGCTATTAGATTTTCCTGCAATTAGCTATATTCTGGATGGAACGGAGAGAATAAAAATCGCGTTCACCTCACCAATGCGCTTTCTCCTCCAACACCAATACACACAAAGATATTAGGTTGCAAAGGTCTCCAATACTATAATGTTCTCTGGAATTGTTGTTTTCCTCATTTTCCTTTTATCCTGTTTGTAATTTTTGTTATTTCGATAACGCACTGTTAGTAGTCAAGTTCTTGAGAATATTGGGGAACTAAGGACTTAGGAGTCAAACTGGTTGGGATGTTTTGGCAAGACCAGAGCCTACTTAATGCCTCTAGAAGAAGTATTTTCTTCTTCCATTTCCTCAGAAAACTCATCACCTTTTCATTTAAAGGCTTTAAAAATTCAATGCACATAGGTTTACCGAGAGAACTAAATAGTTTAAAGGTGAGACACCCCTTTTGTGTCCCCAAAAATTCACATCCTTAAGCTCCATTGGGATACGAGTTGATCCCAACAAACACTCTGTTTGGAAGATTGATTGGAAAATCAGATGAGAGTTCCAAAGGCTTGACTGTTGGTTTAGAAGATTCACCACTTTTAGCATTATTTTAAGAGGACGGTATCAGAAATTGTTAATGGAACAGTATAACTTTATTTTCTTGACCAAGAAGCCTTCAATAAGCCTGAGCTGGACCCCTTTATCCATCTATCTTCTAAAGGATAGAGTAGATCATCTTGCCGATCAGACCTTTAGATTTGATTAGTAAGCAGAAATTGCACTAGAAAGAAACGTGTCTCCACCTAGGGCCAGAACATTTCAGCCTGAGAAATTTATAAAAAATGGTTCAATCAAAATAGAAGTCAGCTTATATTGGAAACTATTAGTCCTTTCTCTCGTCACCTTTTCTTGCCAACAACTTCGTTAGTTATGAGAATAGTGGTCAACAATTTGTTTCCCACCTACGAAAGCTGATTGTGTAATTTACTTGACGGAAGTGATGATTTCTTTCAATCTCTCTTTTAAAACTTCAACAACAATGTCATTGACTTAAGTGGTTAAGCTGATTTGTTAGCTTGGCAATAGTAATATGGATGCCATTGGCTTTTCTGGCGACAATTCATTGGAAAAGTTTCATAGAGGTAATTGTACATGAACAATTCCCTCACTCAACAACAAACGTTTGGAAGAACTCTGCAAATTCAGGCTTGAAGATGTTTCGCTTCCACCCATTTGAACCCAGAGAAGAAACTGCAGCACTAAATTCCTCTTCAAAGGAAGGTAATATTAATCAATGTCTGTCAAAACTAGAGCTCCACTGCCCGCTATAATGGGCTAAGCTAACCCGATAGGGATGAATCTGAACCCTGTTAACAGGAGAGTAGCCTCCCACAAAGGAGATAAACTCAGATAATTCCACTCATCTTCACAAGGCTAGATTAGATCCATCCAAGGAGAGAATTTAAAAAATAAGGTTCCTCCTGTTAACAAGATTATGGAAGTAAGAATAGTTTATTTCCGCTTGCATTTCTGAAGGCAAATCATATCTTCCTTTGGTACCAACTACTGCACATGCTGATGCTTGGCCAATTGTTGCCAAACTAGGCACATATGATGTAATAAGTGCAGTGAAATTATCGTATATGTACAAGAATGACCCGAACCATAGATTATCTCAAGAAAATATATCCTCTTCAAGAAAGAATATAACTTTTTTTGGGTGGTGAAGGGTGTATGAAGGTGGTAGAATTTCATGAATGACGACTGATTGTGGTTTTGTTTTTGTTGTAGGCTTGTTTTGAAGGGAACCCGTTTAAGACTGTTCCAGGACCATTCAAGCTGTTCTGGCAATGCATGCGTTCTAAACCTGGGTATGATTGTGTTTTGATTATAGTTTTATTTTGTTTAGTCTCAAGATAGATTCATTAATTCATCAGGATGAGGACTTAGCTTGACTTCTCAAGAGAGATCGCCAATGGAATTGACAGAATGATGGTTCCTTATAGTCGTTTAACTGGGCCAAATATTTCAGCTGCTGGATTGCAGTTGATTTGGACCATCTCTTTTGTGATCGGTCGATACTTTCAGTTGGCTTTAAAAGTCTAGAAACCGTTTTGAACTCATCACATTTGTAGAATAGTTTCTGAAACCATTTTTTAGTAAAATTGAAAATAGAAACAGCACTTGAAGCATGGTGGTGAAGGTGATAAACTGATAAGACACTTGGATATTATCGGGAGATGATAGTTTTCTTTTTCCATCGTTAGGACTATTTTCTTAGTAAGTCCTTGGTTTTAACCCTGATAAATGACGGAAGTTGGAGAAAAATCCCTCGGCATTGATAATATTAACAAAATGGTATTTTATATGTTATGGACCATGTGATCTTTGGTTTTGCAGGGAGGAACCAACGGAGCCATTTACATATTTGGACTTGGATCCTCCAAGGAGAGAGGTGAAACTCGAGTAA

mRNA sequence

ATGAGCGAAGCAAGTCCTGTGAGAAGGAGAGAAAGTCCATGGGGGATGCCGGAGGGAGAGGATCGGCAACCTAAGCCTCACAGATGCAATGACAGAGTTGAGGATGTTATCCAAGCTTGTTTTGAAGGGAACCCGTTTAAGACTGTTCCAGGACCATTCAAGCTGTTCTGGCAATGCATGCGTTCTAAACCTGGGGAGGAACCAACGGAGCCATTTACATATTTGGACTTGGATCCTCCAAGGAGAGAGGTGAAACTCGAGTAA

Coding sequence (CDS)

ATGAGCGAAGCAAGTCCTGTGAGAAGGAGAGAAAGTCCATGGGGGATGCCGGAGGGAGAGGATCGGCAACCTAAGCCTCACAGATGCAATGACAGAGTTGAGGATGTTATCCAAGCTTGTTTTGAAGGGAACCCGTTTAAGACTGTTCCAGGACCATTCAAGCTGTTCTGGCAATGCATGCGTTCTAAACCTGGGGAGGAACCAACGGAGCCATTTACATATTTGGACTTGGATCCTCCAAGGAGAGAGGTGAAACTCGAGTAA

Protein sequence

MSEASPVRRRESPWGMPEGEDRQPKPHRCNDRVEDVIQACFEGNPFKTVPGPFKLFWQCMRSKPGEEPTEPFTYLDLDPPRREVKLE

Homology

[Close]

BLAST of HG10005392 vs. NCBI nr
Match: XP_038886844.1 (uncharacterized protein LOC120077064 [Benincasa hispida])

HSP 1 Score: 189.9 bits (481), Expect = 9.3e-45
Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 0


Query: 1  MSEASPVRRRESPWGMPEGEDRQPKPHRCNDRVEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSEASPVRRRESPWGMPEGEDRQPKPHRCNDR EDVIQACFEGNPFKTVPGPFKLFWQCM
Sbjct: 1  MSEASPVRRRESPWGMPEGEDRQPKPHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60

Query: 61 RSKPGEEPTEPFTYLDLDPPRREVKLE 88
          RSKPGEEPTEPFTYLDLDPP+REVKLE
Sbjct: 61 RSKPGEEPTEPFTYLDLDPPKREVKLE 87

[Close]

BLAST of HG10005392 vs. NCBI nr
Match: XP_022930654.1 (uncharacterized protein LOC111437056 [Cucurbita moschata] >KAG7022871.1 hypothetical protein SDJN02_16607 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 182.6 bits (462), Expect = 1.5e-42
Identity = 81/87 (93.10%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 1  MSEASPVRRRESPWGMPEGEDRQPKPHRCNDRVEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSEA PV+RRESPWGMPEGEDRQPK HRCNDR EDVIQACFEGNPFKTVPGPFKLFWQCM
Sbjct: 1  MSEARPVKRRESPWGMPEGEDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60

Query: 61 RSKPGEEPTEPFTYLDLDPPRREVKLE 88
          RSKPGEEPTEP+TYLDLDPP+REVKLE
Sbjct: 61 RSKPGEEPTEPYTYLDLDPPKREVKLE 87

[Close]

BLAST of HG10005392 vs. NCBI nr
Match: KAG6589169.1 (Glutamate receptor 3.7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 182.6 bits (462), Expect = 1.5e-42
Identity = 81/87 (93.10%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 1  MSEASPVRRRESPWGMPEGEDRQPKPHRCNDRVEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSEA PV+RRESPWGMPEGEDRQPK HRCNDR EDVIQACFEGNPFKTVPGPFKLFWQCM
Sbjct: 1  MSEARPVKRRESPWGMPEGEDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60

Query: 61 RSKPGEEPTEPFTYLDLDPPRREVKLE 88
          RSKPGEEPTEP+TYLDLDPP+REVKLE
Sbjct: 61 RSKPGEEPTEPYTYLDLDPPKREVKLE 87

[Close]

BLAST of HG10005392 vs. NCBI nr
Match: XP_022136329.1 (uncharacterized protein LOC111008041 [Momordica charantia])

HSP 1 Score: 181.4 bits (459), Expect = 3.3e-42
Identity = 81/87 (93.10%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 1  MSEASPVRRRESPWGMPEGEDRQPKPHRCNDRVEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSEA PVRRRESPWGMPEGEDRQPKPHRCNDR EDVIQA FEGNPFKTVPGPFKLFWQCM
Sbjct: 1  MSEARPVRRRESPWGMPEGEDRQPKPHRCNDRAEDVIQAVFEGNPFKTVPGPFKLFWQCM 60

Query: 61 RSKPGEEPTEPFTYLDLDPPRREVKLE 88
          RSKPGEEPTEP+TYLDL+PP+REVKLE
Sbjct: 61 RSKPGEEPTEPYTYLDLEPPKREVKLE 87

[Close]

BLAST of HG10005392 vs. NCBI nr
Match: XP_023530195.1 (uncharacterized protein LOC111792833 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.0 bits (458), Expect = 4.3e-42
Identity = 80/87 (91.95%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 1  MSEASPVRRRESPWGMPEGEDRQPKPHRCNDRVEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSEA PV+RRESPWGMPEGEDRQPK HRCNDR EDVIQACFEGNPFKTVPGPFKLFW+CM
Sbjct: 1  MSEARPVKRRESPWGMPEGEDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWRCM 60

Query: 61 RSKPGEEPTEPFTYLDLDPPRREVKLE 88
          RSKPGEEPTEP+TYLDLDPP+REVKLE
Sbjct: 61 RSKPGEEPTEPYTYLDLDPPKREVKLE 87

[Close]

BLAST of HG10005392 vs. ExPASy TrEMBL
Match: A0A6J1ES33 (uncharacterized protein LOC111437056 OS=Cucurbita moschata OX=3662 GN=LOC111437056 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.2e-43
Identity = 81/87 (93.10%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 1  MSEASPVRRRESPWGMPEGEDRQPKPHRCNDRVEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSEA PV+RRESPWGMPEGEDRQPK HRCNDR EDVIQACFEGNPFKTVPGPFKLFWQCM
Sbjct: 1  MSEARPVKRRESPWGMPEGEDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60

Query: 61 RSKPGEEPTEPFTYLDLDPPRREVKLE 88
          RSKPGEEPTEP+TYLDLDPP+REVKLE
Sbjct: 61 RSKPGEEPTEPYTYLDLDPPKREVKLE 87

[Close]

BLAST of HG10005392 vs. ExPASy TrEMBL
Match: A0A6J1C410 (uncharacterized protein LOC111008041 OS=Momordica charantia OX=3673 GN=LOC111008041 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.6e-42
Identity = 81/87 (93.10%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 1  MSEASPVRRRESPWGMPEGEDRQPKPHRCNDRVEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSEA PVRRRESPWGMPEGEDRQPKPHRCNDR EDVIQA FEGNPFKTVPGPFKLFWQCM
Sbjct: 1  MSEARPVRRRESPWGMPEGEDRQPKPHRCNDRAEDVIQAVFEGNPFKTVPGPFKLFWQCM 60

Query: 61 RSKPGEEPTEPFTYLDLDPPRREVKLE 88
          RSKPGEEPTEP+TYLDL+PP+REVKLE
Sbjct: 61 RSKPGEEPTEPYTYLDLEPPKREVKLE 87

[Close]

BLAST of HG10005392 vs. ExPASy TrEMBL
Match: A0A6J1JL87 (uncharacterized protein LOC111486214 OS=Cucurbita maxima OX=3661 GN=LOC111486214 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.6e-42
Identity = 79/87 (90.80%), Postives = 83/87 (95.40%), Query Frame = 0


Query: 1  MSEASPVRRRESPWGMPEGEDRQPKPHRCNDRVEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSE  PV+RRESPWGMPEGEDRQPK HRCNDR EDVIQACFEGNPFKT+PGPFKLFWQCM
Sbjct: 1  MSEPRPVKRRESPWGMPEGEDRQPKAHRCNDRAEDVIQACFEGNPFKTIPGPFKLFWQCM 60

Query: 61 RSKPGEEPTEPFTYLDLDPPRREVKLE 88
          RSKPGEEPTEP+TYLDLDPP+REVKLE
Sbjct: 61 RSKPGEEPTEPYTYLDLDPPKREVKLE 87

[Close]

BLAST of HG10005392 vs. ExPASy TrEMBL
Match: A0A5A7T9X4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold888G00380 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.0e-41
Identity = 80/87 (91.95%), Postives = 81/87 (93.10%), Query Frame = 0


Query: 1  MSEASPVRRRESPWGMPEGEDRQPKPHRCNDRVEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSE  PV+RRESPWGMPEGEDRQPK HRCNDR EDVIQACFEGNPFKTVPGPFKLFWQCM
Sbjct: 1  MSEPRPVKRRESPWGMPEGEDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60

Query: 61 RSKPGEEPTEPFTYLDLDPPRREVKLE 88
          RSKPGEEPTEPFTYLD DPPRREVK E
Sbjct: 61 RSKPGEEPTEPFTYLDFDPPRREVKPE 87

[Close]

BLAST of HG10005392 vs. ExPASy TrEMBL
Match: A0A0A0K6V3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044220 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.8e-41
Identity = 78/87 (89.66%), Postives = 82/87 (94.25%), Query Frame = 0


Query: 1  MSEASPVRRRESPWGMPEGEDRQPKPHRCNDRVEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSE  PV+RRESPWGMPEG+DRQPK HRCNDR EDVIQACFEGNPFKTVPGPFKLFWQCM
Sbjct: 1  MSEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60

Query: 61 RSKPGEEPTEPFTYLDLDPPRREVKLE 88
          RSKPGEEPTEP+TYLD DPP+REVKLE
Sbjct: 61 RSKPGEEPTEPYTYLDFDPPKREVKLE 87

[Close]

BLAST of HG10005392 vs. TAIR 10
Match: AT1G05205.1 (unknown protein; Has 44 Blast hits to 44 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 158.7 bits (400), Expect = 2.1e-39
Identity = 73/87 (83.91%), Postives = 79/87 (90.80%), Query Frame = 0


Query: 1  MSEASPVRRRESPWGMPEGEDRQPKPHRCNDRVEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSE  PV RRESPWG+PEG  R+PK HRCNDRVEDVIQA FEGNPFKTVPGPFKLF++CM
Sbjct: 1  MSETRPVPRRESPWGLPEGH-REPKAHRCNDRVEDVIQALFEGNPFKTVPGPFKLFYRCM 60

Query: 61 RSKPGEEPTEPFTYLDLDPPRREVKLE 88
          RSKPGEEPTEPF YLDL+PP+REVKLE
Sbjct: 61 RSKPGEEPTEPFKYLDLEPPKREVKLE 86

The following BLAST results are available for this feature:

BLAST of HG10005392 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886844.1	9.3e-45	97.70	uncharacterized protein LOC120077064 [Benincasa hispida]	[more]
XP_022930654.1	1.5e-42	93.10	uncharacterized protein LOC111437056 [Cucurbita moschata] >KAG7022871.1 hypothet...	[more]
KAG6589169.1	1.5e-42	93.10	Glutamate receptor 3.7, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022136329.1	3.3e-42	93.10	uncharacterized protein LOC111008041 [Momordica charantia]	[more]
XP_023530195.1	4.3e-42	91.95	uncharacterized protein LOC111792833 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10005392 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10005392 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ES33	7.2e-43	93.10	uncharacterized protein LOC111437056 OS=Cucurbita moschata OX=3662 GN=LOC1114370...	[more]
A0A6J1C410	1.6e-42	93.10	uncharacterized protein LOC111008041 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A6J1JL87	3.6e-42	90.80	uncharacterized protein LOC111486214 OS=Cucurbita maxima OX=3661 GN=LOC111486214...	[more]
A0A5A7T9X4	1.0e-41	91.95	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0K6V3	1.8e-41	89.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044220 PE=4 SV=1	[more]

BLAST of HG10005392 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05205.1	2.1e-39	83.91	unknown protein; Has 44 Blast hits to 44 proteins in 16 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR36706:SF2	BNAC08G44080D PROTEIN	coord: 1..87
None	No IPR available	PANTHER	PTHR36706	UNNAMED PRODUCT	coord: 1..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005392.1	HG10005392.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity