HG10005388 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005388
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein translation factor SUI1 homolog
Location	Chr07: 2020125 .. 2020982 (+)
RNA-Seq Expression	HG10005388
Synteny	HG10005388

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGGTAGCTTAACAACTCCCTGTTCTTGGTTTTTACTTCTTATTGTGTTGTACTGTATAAGAAGCCTGAATGTTGGTTTTGATATTAATTAATTTCGTTTGATGGTTAGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGAGCAAAAGAGTATGTTCATGTGCGTATACAGCAACGCAACGGGAGAAAAAGTTTGACAACTGTCCAAGGATTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTCTGTTCTCCCACCCTAAATGATTTGTATTTAGGCCCCTTTTTTTGTTGATTCGTCTGACATTAAAACTAAAAGGAGAAAACTAGTTTCTAATTTTGGATAAAGTTGGGATTAGTGTTAGAACAATTGGGGGTGCAAGAATAATGGTAATGCTCTATTTAGGCATTAAAGAGGGAAAATAAAACCAACTCATAGGAAGTTTGCTCTGCCTGTCATTTAGCAGTCAGTTGATTTCTTTCTGCATAAAGCTGCTGACAGGAGTTTTCATTATGGGTTGTGGTTTGGTTTACATATCATGAACAAGAATCTAGATGGTGTTATTGGTATTGTAGGAATGCTTCTATGCATGTGCTTTTCTTTCTTTGTTTCCTTTTCCGGAATATGAAAGCATACCATGCAAATCAATTACATCATTTGCATTGGTTGTCCTGCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGTAATGGTTGACTGTATATAG

mRNA sequence

ATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGAGCAAAAGAGTATGTTCATGTGCGTATACAGCAACGCAACGGGAGAAAAAGTTTGACAACTGTCCAAGGATTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGTAATGGTTGACTGTATATAG

Coding sequence (CDS)

ATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGAGCAAAAGAGTATGTTCATGTGCGTATACAGCAACGCAACGGGAGAAAAAGTTTGACAACTGTCCAAGGATTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGTAATGGTTGACTGTATATAG

Protein sequence

MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQVMVDCI

Homology

[Close]

BLAST of HG10005388 vs. NCBI nr
Match: KAG6572304.1 (hypothetical protein SDJN03_29032, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 200.7 bits (509), Expect = 6.4e-48
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL
Sbjct: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 99

[Close]

BLAST of HG10005388 vs. NCBI nr
Match: KAG7011916.1 (hypothetical protein SDJN02_26824 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 200.7 bits (509), Expect = 6.4e-48
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL
Sbjct: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 99

[Close]

BLAST of HG10005388 vs. NCBI nr
Match: XP_004144489.1 (protein translation factor SUI1 homolog [Cucumis sativus] >XP_008455418.1 PREDICTED: protein translation factor SUI1 homolog [Cucumis melo] >XP_008455419.1 PREDICTED: protein translation factor SUI1 homolog [Cucumis melo] >XP_011658706.1 protein translation factor SUI1 homolog [Cucumis sativus] >XP_022135675.1 protein translation factor SUI1 homolog [Momordica charantia] >XP_022135676.1 protein translation factor SUI1 homolog [Momordica charantia] >XP_022135677.1 protein translation factor SUI1 homolog [Momordica charantia] >XP_022135678.1 protein translation factor SUI1 homolog [Momordica charantia] >XP_022930780.1 protein translation factor SUI1 homolog [Cucurbita moschata] >XP_022952138.1 protein translation factor SUI1 homolog [Cucurbita moschata] >XP_022969300.1 protein translation factor SUI1 homolog [Cucurbita maxima] >XP_022989018.1 protein translation factor SUI1 homolog [Cucurbita maxima] >XP_023530208.1 protein translation factor SUI1 homolog [Cucurbita pepo subsp. pepo] >XP_023554643.1 protein translation factor SUI1 homolog [Cucurbita pepo subsp. pepo] >XP_038886949.1 protein translation factor SUI1 homolog [Benincasa hispida] >XP_038886950.1 protein translation factor SUI1 homolog [Benincasa hispida] >XP_038886951.1 protein translation factor SUI1 homolog [Benincasa hispida] >XP_038886965.1 protein translation factor SUI1 homolog [Benincasa hispida] >KAG6589173.1 hypothetical protein SDJN03_17738, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022875.1 hypothetical protein SDJN02_16611 [Cucurbita argyrosperma subsp. argyrosperma] >KGN43535.1 hypothetical protein Csa_020483 [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 6.4e-48
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL
Sbjct: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 99

[Close]

BLAST of HG10005388 vs. NCBI nr
Match: XP_022989016.1 (protein translation factor SUI1 homolog [Cucurbita maxima] >XP_022989017.1 protein translation factor SUI1 homolog [Cucurbita maxima] >XP_023530206.1 protein translation factor SUI1 homolog [Cucurbita pepo subsp. pepo] >XP_023530207.1 protein translation factor SUI1 homolog [Cucurbita pepo subsp. pepo] >KAG7022876.1 hypothetical protein SDJN02_16612 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 199.5 bits (506), Expect = 1.4e-47
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MSEFNVQIPSAFDPFADANAEDSGAG+KEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL
Sbjct: 1   MSEFNVQIPSAFDPFADANAEDSGAGSKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 99

[Close]

BLAST of HG10005388 vs. NCBI nr
Match: KAG6589174.1 (hypothetical protein SDJN03_17739, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 199.5 bits (506), Expect = 1.4e-47
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MSEFNVQIPSAFDPFADANAEDSGAG+KEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL
Sbjct: 1   MSEFNVQIPSAFDPFADANAEDSGAGSKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 99

[Close]

BLAST of HG10005388 vs. ExPASy Swiss-Prot
Match: Q94JV4 (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g54290 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 4.7e-46
Identity = 88/99 (88.89%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MS+  VQ+P+AFDPFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY+KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQ 99

[Close]

BLAST of HG10005388 vs. ExPASy Swiss-Prot
Match: O48650 (Protein translation factor SUI1 homolog OS=Salix bakko OX=72444 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 8.1e-46
Identity = 88/99 (88.89%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MSEF+  IP+AFDPFA+ANAEDSGAG K+YVHVR+QQRNGRKSLTTVQGLKK++SYNKIL
Sbjct: 1   MSEFDNAIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS+FLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQ 99

[Close]

BLAST of HG10005388 vs. ExPASy Swiss-Prot
Match: P41568 (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27130 PE=1 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 1.1e-45
Identity = 88/99 (88.89%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MSE + Q+P+AFDPFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQ 99

[Close]

BLAST of HG10005388 vs. ExPASy Swiss-Prot
Match: Q9SQF4 (Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.1e-45
Identity = 88/99 (88.89%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MSE + Q+P+AFDPFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQ 99

[Close]

BLAST of HG10005388 vs. ExPASy Swiss-Prot
Match: A6MZM2 (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=GOS2 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-44
Identity = 89/101 (88.12%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSG--AGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60
           MS+ ++QIP+AFDPFA+ANA DSG  AG+K+YVHVRIQQRNGRKSLTTVQGLKKEFSYNK
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQ
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQ 101

[Close]

BLAST of HG10005388 vs. ExPASy TrEMBL
Match: A0A6J1HZK0 (protein translation factor SUI1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468348 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.1e-48
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL
Sbjct: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 99

[Close]

BLAST of HG10005388 vs. ExPASy TrEMBL
Match: A0A1S3C0V7 (protein translation factor SUI1 homolog OS=Cucumis melo OX=3656 GN=LOC103495584 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.1e-48
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL
Sbjct: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 99

[Close]

BLAST of HG10005388 vs. ExPASy TrEMBL
Match: A0A6J1C5J4 (protein translation factor SUI1 homolog OS=Momordica charantia OX=3673 GN=LOC111007577 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.1e-48
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL
Sbjct: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 99

[Close]

BLAST of HG10005388 vs. ExPASy TrEMBL
Match: A0A6J1GJN9 (protein translation factor SUI1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111454903 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.1e-48
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL
Sbjct: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 99

[Close]

BLAST of HG10005388 vs. ExPASy TrEMBL
Match: A0A0A0K1M6 (SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044260 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.1e-48
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL
Sbjct: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 99

[Close]

BLAST of HG10005388 vs. TAIR 10
Match: AT1G54290.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 184.9 bits (468), Expect = 3.4e-47
Identity = 88/99 (88.89%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MS+  VQ+P+AFDPFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY+KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQ 99

[Close]

BLAST of HG10005388 vs. TAIR 10
Match: AT4G27130.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 183.7 bits (465), Expect = 7.5e-47
Identity = 88/99 (88.89%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MSE + Q+P+AFDPFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQ 99

[Close]

BLAST of HG10005388 vs. TAIR 10
Match: AT5G54760.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 182.2 bits (461), Expect = 2.2e-46
Identity = 87/99 (87.88%), Postives = 93/99 (93.94%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MSE + Q+P+AFDPFADAN EDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQ 99

[Close]

BLAST of HG10005388 vs. TAIR 10
Match: AT5G54760.2 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 182.2 bits (461), Expect = 2.2e-46
Identity = 87/99 (87.88%), Postives = 93/99 (93.94%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MSE + Q+P+AFDPFADAN EDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQ 99

[Close]

BLAST of HG10005388 vs. TAIR 10
Match: AT5G54760.3 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 182.2 bits (461), Expect = 2.2e-46
Identity = 87/99 (87.88%), Postives = 93/99 (93.94%), Query Frame = 0


Query: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60
           MSE + Q+P+AFDPFADAN EDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ 100
           KDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQ
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQ 99

The following BLAST results are available for this feature:

BLAST of HG10005388 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572304.1	6.4e-48	100.00	hypothetical protein SDJN03_29032, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7011916.1	6.4e-48	100.00	hypothetical protein SDJN02_26824 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_004144489.1	6.4e-48	100.00	protein translation factor SUI1 homolog [Cucumis sativus] >XP_008455418.1 PREDIC...	[more]
XP_022989016.1	1.4e-47	98.99	protein translation factor SUI1 homolog [Cucurbita maxima] >XP_022989017.1 prote...	[more]
KAG6589174.1	1.4e-47	98.99	hypothetical protein SDJN03_17739, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of HG10005388 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JV4	4.7e-46	88.89	Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
O48650	8.1e-46	88.89	Protein translation factor SUI1 homolog OS=Salix bakko OX=72444 PE=3 SV=1	[more]
P41568	1.1e-45	88.89	Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4...	[more]
Q9SQF4	1.1e-45	88.89	Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1	[more]
A6MZM2	1.2e-44	88.12	Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 G...	[more]

BLAST of HG10005388 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HZK0	3.1e-48	100.00	protein translation factor SUI1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468...	[more]
A0A1S3C0V7	3.1e-48	100.00	protein translation factor SUI1 homolog OS=Cucumis melo OX=3656 GN=LOC103495584 ...	[more]
A0A6J1C5J4	3.1e-48	100.00	protein translation factor SUI1 homolog OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1GJN9	3.1e-48	100.00	protein translation factor SUI1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A0A0K1M6	3.1e-48	100.00	SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044260 PE=3 S...	[more]

BLAST of HG10005388 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54290.1	3.4e-47	88.89	Translation initiation factor SUI1 family protein	[more]
AT4G27130.1	7.5e-47	88.89	Translation initiation factor SUI1 family protein	[more]
AT5G54760.1	2.2e-46	87.88	Translation initiation factor SUI1 family protein	[more]
AT5G54760.2	2.2e-46	87.88	Translation initiation factor SUI1 family protein	[more]
AT5G54760.3	2.2e-46	87.88	Translation initiation factor SUI1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.780.10		coord: 1..103 e-value: 6.5E-42 score: 144.7
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 1..100
None	No IPR available	PANTHER	PTHR10388:SF52	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 1..100
IPR005874	Eukaryotic translation initiation factor SUI1	PIRSF	PIRSF004499	Transl_init_SUI1_Euk	coord: 1..104 e-value: 6.7E-43 score: 143.5
IPR005874	Eukaryotic translation initiation factor SUI1	TIGRFAM	TIGR01160	TIGR01160	coord: 6..100 e-value: 2.9E-49 score: 164.2
IPR005874	Eukaryotic translation initiation factor SUI1	CDD	cd11566	eIF1_SUI1	coord: 29..100 e-value: 9.31222E-44 score: 135.355
IPR001950	SUI1 domain	PFAM	PF01253	SUI1	coord: 28..99 e-value: 1.2E-25 score: 89.7
IPR001950	SUI1 domain	PROSITE	PS50296	SUI1	coord: 31..101 score: 23.714247
IPR036877	SUI1 domain superfamily	SUPERFAMILY	55159	eIF1-like	coord: 4..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005388.1	HG10005388.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003743	translation initiation factor activity