HG10005025 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005025
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	piRNA biogenesis protein EXD1-like
Location	Chr08: 22361139 .. 22366119 (-)
RNA-Seq Expression	HG10005025
Synteny	HG10005025

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGGTGAAAATCAGACCGATCCTGAAGCCAGCGCAACCTTGGTTCCTATACATATTGTTACTCATGTATCTCAACTGCCTAACGAATTTGTTGAACCATCACCTGAAAAGCCTCTGGTAGTTGGCTTTGATTGTGAAGGTGTTGATCTGTGTCGCCATGGAAACCTCTGTGTCATGCAGGTAAATAAAATGCTAAGAACAACAGTTTTACGTTTACCATCCTTGTGGAGAGTATGACATGTTAGGGCAGAGGCGTGAGTTAACCTTCCTAACTGATGTAGTCAGTGGTTCTAACTTATAATTTCATGTTTTTAATCGTCTGGTGATATTGTCAATTGACTCAATTCGTAGTACAAGCTGCGGCCATGCAAGAGAATGACTAATACTATAGCTTTGCAGTTAAATGAGCGCACCTGGATAGTCCCCCACTTGTAGCTATAGTAACGCATCCTTTAAATTACAGGGGTTGACTACTGTCAAATGCTTGGGCATTCAAGGATGTTCAGTCTCTACTCTAGTAGAAAACAATTGTCAAATTAGTTGACTTTATCTTTTCATATGTGTTCATTTCTTTGCAGATTGCATTTCCAGATGCTGTATATCTGGTTGATGCTGTACAGGGAGGAGACGAACTTGTGAAAGTCTGTAAGCCTGCCCTTGAGTCCACATATGTCACAAAAGTTATTCATGATTGCAAACGAGATAGCGAGGTCTCTTTTGAACTTTGTTTCCGCTACAGATTGCCTTCACAGCGACATGGCATGTTATAGCTAATATTTACTCTGTTTTTTTTTTCTCTGTAGGCATTGTACTTTCAGTTTGGTATCAAGTTGAACAACGTTATTGATACACAGGTGATTATCAATTGTGAGAAGCCTGACACTCTTCACTTGTTTACACCATTTTATCATGCATTATATTTTATCTTATTCTAGAGTGCCTAGCCACTTAGCGTGCCAATTTAATGTTACTAAAACATAAGAATATCTTTGTACTTCTCATCTTCTATGTTTCATTTGATAGAAATTGAGACTGTCATATCAGGAGAATGGATCCTACTAATCCACAGACCATTGTTCCACTGTGTCTAATTTAGGTTCCTTAAAGTTCTCATGATGTTAATTTTTCCCATCTATTTTGCACTTGTATGATTTGAATCTACAATCTGCCAGTGCTATCATAAATTTTTAATTCTACATGCTCATTTTAAAGATTTATGTGAATATATTCTCTCAGTAAACTCTAATTTTAACTTATTATGGATTATTATATGATTAGAATCTGCTATCTTGTAATTTTTAAGGTTGAAAGTATGCATATCTTGAAAAAGAATAGAGAGAGAGAGCGATTATCTTGTGACTTTTCAAATGCCGATAAAGAGTCTGCTTTCTTGATTTAAAAAAGTGATCTAAACAATTTATTTTAATTTGAGCTACTTTGTAATTACTTTGGGGCTAAATGTTTGTATGTAAGCTGCAATATGGAGAAAGGCTGAGTTATTTGGACCTTCCTGCTTTAATTTTCAATTGTATTACTTGATTCAGATTGCATATTCACTTTTAGAGGAGCAAGAGGGACGGACAAAGACACCGGATAACTATATCTCCTTTGTTAGTCTTCTTGCAGATTCACGTTATTGTGGTATTATATTAATCCTAATACCTAACTATTCTCCATTTTTTATCATGGAAATTTATGCATTTTTTAATTTCTTGGATGAAATCACCTATACTCGCTCAAAAGTATTAACTGATAATTGCTTACTAAACTTCGAAGGCAGAAAAGCTTGATTTATTGCTTGCCATCTTTATCTCAAGACAACTTCGTACTTCCTACTTATTATGATTTTGGTGTTTCCATGAGCTGCATGGTTGGGGGATAGTGATGCACACAAGTTAAATGAATACCTTAAAGATTCTTTTAATGCTAAAAGATACAGAAGACTGCCATATGTATAGACATGGCAGAATAGGAAAATGGGAATGTAGGAAACAAGTCTACAACCGGCTGAACTGGTAAAAGACTTGCCACCTGAAAACAAGAACTATTACAGAACTAAAAGAAAGGAAACTACCCGACCAAAGACTATTTAACAATCAAAGAGAGAAACAAGATTGACAAGGAAGGCTAAGAAAATCAAGATGTGCCTACATCAAATAGATAATTAACCAAAAGAACCTCCTGCTTGAAAAGGGGAAAAAAAGAGAGTAGAAATTTGAATTTGGAAGCGATCAGTCTTATTTACCATTTATACTCTTTGTTTCCTTTTTCTTTCTTTCCCTTGCTGGTTTCCTTGAAACCTTGCCTTCCTGGAGAGTTTTACACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTGAAAAGGTTGGTGGATGTTGCTTGGTTTCTCAATCTAGAACTTCTAAGTAAAAGTGCCTAATATGTGGTCTATTACTGGGTGACCTTTTCAAAGATGAACACTAATGACTGGATTAAATAAGGAATTAACATTTGCAATTGCAAATTTGCAACCTCAAAGATATGTTATTGTCAGATGATAGATATCCTTCACATTCATTCCATCCTTTCTTCATCAATATGATGAAGTTTCTTGATCTTTCTTCAGCATGTTAGCGTTGCTTGTGGGCATTGCAGACTTTATAGTTCAAATTGTAGGTGTGTAGATTTGGGAGTGCCGAGAGTTATACTTTTTGGTGAAAAAGGCGAAAGCCATTTTTCTGATTAGAAGTATAGGAACAAATTTAAAGACAGTTCTAGTGAGTTGAAAGTGTTTGTGGCTCGTTGTAGTCCGTACCACTGCTCCAAATAAATATACTTTGTGTTTGTTGTTATTCTTTTTCTACGAAATTGGGAAGTCTTTTTGTCTGATCTCCCATCTACTTTTTTATTAGGAGTAAAGTGAACATTAAGTTCCTCTCCTCGTGTATTTCCTTTTTTCTTTACTGTTTGTATGTAGGATATAACTTGTTTGGCCTGCTAATTGAATTACCAGAATTTTCTGAAAGGAGCAATGTAGAATCTACATCAAGTTCTTATGATCTCTGAGAAATTGATAGGCTTTTGTTATATGATATGCATTTATCCATTATTTTTAAACTTCATACGTTTTTCTGCTAATGCTGCCATTCTTATTATATGTCTAACCAACATGTAATCCTCACGCTTAAATGTAGGTGTATCGTATCTGGAGAAGGAAGAGGTCCGCCTCCTACTTAGAAAGGTTAGTTTTGTCATAGTTTGTATTGCCGTGGAGAATATTGTATCTAAGCAAGAATTTCTGTGGTTCTACATACTAAGCATTGTTTTTCGTGATGGGGTGCTTTGTAGGTCAGATGTGCTTGATTCCTAAATGTAATATCCTTATTTTGGAGTAGCACAAGTATAAATATAATGTAGAGACATTTCAAGTCTTTTTAGTCAACAAAAATGACATGGAAACTAAGATTATTAATATGTAGGTATAGCATAATTATGACCATAATATTATAAGATGCAAAATGTTATCTTATCATAATATTAATATGCAGGTGTAGTATAATTGTTCCACAAGTTTATGTATCTTGCATAAAACTGAAATTGTAAATTTATATTTTGCAGGACCCCAAGTTTTGGACCTACAGACCATTGTCTGAATTGATGGTCCGTGCAGCTGCTGATGATGTACGCTTTCTTCTTTACATCTATCACAAGATGATGGAGAAATTGAATCACCAATCGCTGTGGTACCTTGCAGTGCGTGGTGCTTTGTACTGTCGGTGTTTTTGCATCAGTGATAATGAATATGCTGACTGGCCTCCTCTCCCTTCTGTTCCAGGTTTTCTTTAAGAACACACCTTACCATGTGTAGTCCATATAATGAGAATAATACCAAATTGAACGCTCTATATGTTAAGTTGATTAAACTATAATTACAAACTTTTGAACATGTACAGTTGTTTGAATCCTTTTCATCACAATAGTTCTCCTGTGGTGTTTCATTATTGTTGGCGTCTTTTATGTTATATGATTTCACCATTCATATTGGGTTCAAAATTTAAAAAGGCCATTTAGCAATGTGGGTAATGTTGGCTCACCATATTTCATTCAATTATCCAAGTACTGCTAGAATCTTCTGAACGTCAAATATGTTATAATTTATAAATGTTTTATTATCTTTCTAATTATTATTTGCACATATGGTTTGGTGTTTCTATTGTTAGGGGTGCTTAGACAACGTTTCATTTCAGATCTTTACGGGGGGGGGGGGGGGGAAGACTATTTTACATTTGATGCGTCTATCATTTACATTGGTCTAACATGTTTTTTCAGATGACCTTGTAGTAGAGGGCAATGCTCCTGAAGAAGAAATTCTTTCAGTCTTAGATGTTCCCCATGGAATGATGGGTCGCGTAATTGGTAGGAAGGGAGCCTCAATTTTGTCAATAAAGGAATCTTGCAAGTAATTCTTTATCGCCTATATCCTTACGACTTCATTTATATCCTTTAGGCTAAAAAATATCATATTCGTTCTTGTTTCTCACCTTGGATTCTCTAAATGCAGTGCGGAAATTCTCATTGGCGGTGCTAAGGGCCCACCAGACAAGGTTAGTCTCTCTTCTCATTCACTTCAAAATAAACCACTGTAAAGTCTAAAATTTGATGCTATTCTTTAACCTTTCCTGGGAAGGAAGTTCCTGGATTCTTCTCCATTTGCTTCAAATCCCATAGCCTAGATTAGAACTCAACTCTTCTTGTGTTCTTTGTTAAAAAGCCCAGAAACAAACAAACCAACAGGGTTTGCTCTGCTTGCTTGGAGTTTCGAGTATCAGCCAAAAAGCTGTTGAATGTTGATGGATACTGAAAGTTGTGGCAGTAAGTAAAATTGTTGTTGTTATGACTTATGTAGGTATTCATCATTGGATCGGTGAGGCAGGTGAGGAAGGCAGAAGCTATGCTAAGAGGAAGGATGCTTGAAATATGA

mRNA sequence

ATGTCAGGTGAAAATCAGACCGATCCTGAAGCCAGCGCAACCTTGGTTCCTATACATATTGTTACTCATGTATCTCAACTGCCTAACGAATTTGTTGAACCATCACCTGAAAAGCCTCTGGTAGTTGGCTTTGATTGTGAAGGTGTTGATCTGTGTCGCCATGGAAACCTCTGTGTCATGCAGATTGCATTTCCAGATGCTGTATATCTGGTTGATGCTGTACAGGGAGGAGACGAACTTGTGAAAGTCTGTAAGCCTGCCCTTGAGTCCACATATGTCACAAAAGTTATTCATGATTGCAAACGAGATAGCGAGGCATTGTACTTTCAGTTTGGTATCAAGTTGAACAACGTTATTGATACACAGGACCCCAAGTTTTGGACCTACAGACCATTGTCTGAATTGATGGTCCGTGCAGCTGCTGATGATGTACGCTTTCTTCTTTACATCTATCACAAGATGATGGAGAAATTGAATCACCAATCGCTGTGGTACCTTGCAGTGCGTGGTGCTTTGTACTGTCGGTGTTTTTGCATCAGTGATAATGAATATGCTGACTGGCCTCCTCTCCCTTCTGTTCCAGATGACCTTGTAGTAGAGGGCAATGCTCCTGAAGAAGAAATTCTTTCAGTCTTAGATGTTCCCCATGGAATGATGGGTCGCGTAATTGGTAGGAAGGGAGCCTCAATTTTGTCAATAAAGGAATCTTGCAATGCGGAAATTCTCATTGGCGGTGCTAAGGGCCCACCAGACAAGGTATTCATCATTGGATCGGTGAGGCAGGTGAGGAAGGCAGAAGCTATGCTAAGAGGAAGGATGCTTGAAATATGA

Coding sequence (CDS)

ATGTCAGGTGAAAATCAGACCGATCCTGAAGCCAGCGCAACCTTGGTTCCTATACATATTGTTACTCATGTATCTCAACTGCCTAACGAATTTGTTGAACCATCACCTGAAAAGCCTCTGGTAGTTGGCTTTGATTGTGAAGGTGTTGATCTGTGTCGCCATGGAAACCTCTGTGTCATGCAGATTGCATTTCCAGATGCTGTATATCTGGTTGATGCTGTACAGGGAGGAGACGAACTTGTGAAAGTCTGTAAGCCTGCCCTTGAGTCCACATATGTCACAAAAGTTATTCATGATTGCAAACGAGATAGCGAGGCATTGTACTTTCAGTTTGGTATCAAGTTGAACAACGTTATTGATACACAGGACCCCAAGTTTTGGACCTACAGACCATTGTCTGAATTGATGGTCCGTGCAGCTGCTGATGATGTACGCTTTCTTCTTTACATCTATCACAAGATGATGGAGAAATTGAATCACCAATCGCTGTGGTACCTTGCAGTGCGTGGTGCTTTGTACTGTCGGTGTTTTTGCATCAGTGATAATGAATATGCTGACTGGCCTCCTCTCCCTTCTGTTCCAGATGACCTTGTAGTAGAGGGCAATGCTCCTGAAGAAGAAATTCTTTCAGTCTTAGATGTTCCCCATGGAATGATGGGTCGCGTAATTGGTAGGAAGGGAGCCTCAATTTTGTCAATAAAGGAATCTTGCAATGCGGAAATTCTCATTGGCGGTGCTAAGGGCCCACCAGACAAGGTATTCATCATTGGATCGGTGAGGCAGGTGAGGAAGGCAGAAGCTATGCTAAGAGGAAGGATGCTTGAAATATGA

Protein sequence

MSGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI

Homology

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BLAST of HG10005025 vs. NCBI nr
Match: XP_038886611.1 (piRNA biogenesis protein EXD1 isoform X1 [Benincasa hispida])

HSP 1 Score: 537.7 bits (1384), Expect = 5.8e-149
Identity = 269/323 (83.28%), Postives = 273/323 (84.52%), Query Frame = 0


Query: 2   SGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQ 61
           SGENQTDPE +ATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQ
Sbjct: 18  SGENQTDPETNATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQ 77

Query: 62  IAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT 121
           IAFPDAVYLVDAVQGG+ELVKVCKPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDT
Sbjct: 78  IAFPDAVYLVDAVQGGEELVKVCKPALESKYVTKVIHDCKRDSEALYFQFGIKLNNVIDT 137

Query: 122 Q------------------------------------------------DPKFWTYRPLS 181
           Q                                                DPKFWTYRPLS
Sbjct: 138 QIAYSLLEEQEGRTKTPDNYISFVSLLADSRYCGVSYVEKEEVRLLLRKDPKFWTYRPLS 197

Query: 182 ELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSV 241
           ELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSV
Sbjct: 198 ELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSV 257

Query: 242 PDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKV 277
           PD+LVVEGNAP+EEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKV
Sbjct: 258 PDNLVVEGNAPDEEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKV 317

[Close]

BLAST of HG10005025 vs. NCBI nr
Match: XP_008444501.1 (PREDICTED: exosome component 10 isoform X2 [Cucumis melo])

HSP 1 Score: 536.6 bits (1381), Expect = 1.3e-148
Identity = 264/295 (89.49%), Postives = 269/295 (91.19%), Query Frame = 0


Query: 2   SGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQ 61
           SGENQTDPEA+ATLVPIHIVTHVSQLP EFVEPS EKPLVVGFDCEGVDLCRHGNLCVMQ
Sbjct: 18  SGENQTDPEANATLVPIHIVTHVSQLPKEFVEPSAEKPLVVGFDCEGVDLCRHGNLCVMQ 77

Query: 62  IAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT 121
           IAFPDAVYLVDAVQGG+ELVKVCKPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDT
Sbjct: 78  IAFPDAVYLVDAVQGGEELVKVCKPALESKYVTKVIHDCKRDSEALYFQFGIKLNNVIDT 137

Query: 122 Q--------------------DPKFWTYRPLSELMVRAAADDVRFLLYIYHKMMEKLNHQ 181
           Q                    DPKFWTYRP+SELMVRAAADDVRFLLYIYHKMMEKLNHQ
Sbjct: 138 QVIINCVSYVEKEEVRLLLRKDPKFWTYRPMSELMVRAAADDVRFLLYIYHKMMEKLNHQ 197

Query: 182 SLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGR 241
           SLWYLAVRGALYCRCFCISDN YADWPPLPSVPD+LV EGNAPEEEILSVLDVPHGMMGR
Sbjct: 198 SLWYLAVRGALYCRCFCISDNGYADWPPLPSVPDNLVKEGNAPEEEILSVLDVPHGMMGR 257

Query: 242 VIGRKGASILSIKESCNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI 277
           VIGR+GASILSIKESCNAEILIGGAKGPPDKV IIGSVRQVRKAEAMLRGRMLEI
Sbjct: 258 VIGRRGASILSIKESCNAEILIGGAKGPPDKVLIIGSVRQVRKAEAMLRGRMLEI 312

[Close]

BLAST of HG10005025 vs. NCBI nr
Match: XP_038886612.1 (piRNA biogenesis protein EXD1 isoform X2 [Benincasa hispida])

HSP 1 Score: 536.2 bits (1380), Expect = 1.7e-148
Identity = 268/322 (83.23%), Postives = 272/322 (84.47%), Query Frame = 0


Query: 3   GENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQI 62
           GENQTDPE +ATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQI
Sbjct: 7   GENQTDPETNATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQI 66

Query: 63  AFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ 122
           AFPDAVYLVDAVQGG+ELVKVCKPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ
Sbjct: 67  AFPDAVYLVDAVQGGEELVKVCKPALESKYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQ 126

Query: 123 ------------------------------------------------DPKFWTYRPLSE 182
                                                           DPKFWTYRPLSE
Sbjct: 127 IAYSLLEEQEGRTKTPDNYISFVSLLADSRYCGVSYVEKEEVRLLLRKDPKFWTYRPLSE 186

Query: 183 LMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVP 242
           LMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVP
Sbjct: 187 LMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSVP 246

Query: 243 DDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKVF 277
           D+LVVEGNAP+EEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKVF
Sbjct: 247 DNLVVEGNAPDEEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKVF 306

[Close]

BLAST of HG10005025 vs. NCBI nr
Match: XP_004142915.1 (piRNA biogenesis protein EXD1 [Cucumis sativus] >KGN62409.1 hypothetical protein Csa_018582 [Cucumis sativus])

HSP 1 Score: 527.3 bits (1357), Expect = 7.8e-146
Identity = 264/323 (81.73%), Postives = 270/323 (83.59%), Query Frame = 0


Query: 2   SGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQ 61
           SGENQTDPEA+ATLVPIHIVTHVSQLP EFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQ
Sbjct: 18  SGENQTDPEANATLVPIHIVTHVSQLPKEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQ 77

Query: 62  IAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT 121
           IAFPDAVYLVDAVQGG+ELVKVCKPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDT
Sbjct: 78  IAFPDAVYLVDAVQGGEELVKVCKPALESKYVTKVIHDCKRDSEALYFQFGIKLNNVIDT 137

Query: 122 Q------------------------------------------------DPKFWTYRPLS 181
           Q                                                DPKFWTYRP+S
Sbjct: 138 QIAYSLLEEQEGRTKTPDNYISFVSLLADSRYCGVSYVEKEEVRLLLRKDPKFWTYRPMS 197

Query: 182 ELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSV 241
           ELMVRAAADDVRFLLYIYHKMMEKLNH+SLWYLAVRGALYCRCFCISDN YADWPPLPSV
Sbjct: 198 ELMVRAAADDVRFLLYIYHKMMEKLNHRSLWYLAVRGALYCRCFCISDNGYADWPPLPSV 257

Query: 242 PDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKV 277
           PD+LV EGNAPEEEILSVLDVPHGMMGRVIGR+GASILSIKESCNAEILIGGAKGPPDKV
Sbjct: 258 PDNLVKEGNAPEEEILSVLDVPHGMMGRVIGRRGASILSIKESCNAEILIGGAKGPPDKV 317

[Close]

BLAST of HG10005025 vs. NCBI nr
Match: XP_008444500.1 (PREDICTED: piRNA biogenesis protein EXD1 isoform X1 [Cucumis melo] >KAA0060983.1 piRNA biogenesis protein EXD1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 525.8 bits (1353), Expect = 2.3e-145
Identity = 264/323 (81.73%), Postives = 269/323 (83.28%), Query Frame = 0


Query: 2   SGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQ 61
           SGENQTDPEA+ATLVPIHIVTHVSQLP EFVEPS EKPLVVGFDCEGVDLCRHGNLCVMQ
Sbjct: 18  SGENQTDPEANATLVPIHIVTHVSQLPKEFVEPSAEKPLVVGFDCEGVDLCRHGNLCVMQ 77

Query: 62  IAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT 121
           IAFPDAVYLVDAVQGG+ELVKVCKPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDT
Sbjct: 78  IAFPDAVYLVDAVQGGEELVKVCKPALESKYVTKVIHDCKRDSEALYFQFGIKLNNVIDT 137

Query: 122 Q------------------------------------------------DPKFWTYRPLS 181
           Q                                                DPKFWTYRP+S
Sbjct: 138 QIAYSLLEEQEGRTKTPDNYISFVSLLADSRYCGVSYVEKEEVRLLLRKDPKFWTYRPMS 197

Query: 182 ELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSV 241
           ELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDN YADWPPLPSV
Sbjct: 198 ELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNGYADWPPLPSV 257

Query: 242 PDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKV 277
           PD+LV EGNAPEEEILSVLDVPHGMMGRVIGR+GASILSIKESCNAEILIGGAKGPPDKV
Sbjct: 258 PDNLVKEGNAPEEEILSVLDVPHGMMGRVIGRRGASILSIKESCNAEILIGGAKGPPDKV 317

[Close]

BLAST of HG10005025 vs. ExPASy Swiss-Prot
Match: Q8CDF7 (piRNA biogenesis protein EXD1 OS=Mus musculus OX=10090 GN=Exd1 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-11
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 37  EKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDA-VQGGDELVKVCKPALESTYVTK 96
           +K  V+    EG ++CRHG LC +Q+A    VYL D  + G        +  LE   + K
Sbjct: 153 KKQSVLSVAAEGANVCRHGKLCWLQVATNSRVYLFDIFLLGSRAFNNGLQMILEDKRILK 212

Query: 97  VIHDCKRDSEALYFQFGIKLNNVIDTQ 123
           VIHDC+  S+ L  Q+GI LNNV DTQ
Sbjct: 213 VIHDCRWLSDCLSHQYGIMLNNVFDTQ 239

[Close]

BLAST of HG10005025 vs. ExPASy Swiss-Prot
Match: Q8NHP7 (piRNA biogenesis protein EXD1 OS=Homo sapiens OX=9606 GN=EXD1 PE=1 SV=4)

HSP 1 Score: 69.7 bits (169), Expect = 5.8e-11
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 37  EKPLVVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDA-VQGGDELVKVCKPALESTYVTK 96
           +K  V+    EG ++CRHG LC +Q+A    VYL D  + G        +  LE   + K
Sbjct: 96  KKQNVLSVAAEGANVCRHGKLCWLQVATNCRVYLFDIFLLGSRAFHNGLQMILEDKRILK 155

Query: 97  VIHDCKRDSEALYFQFGIKLNNVIDTQ 123
           VIHDC+  S+ L  Q+GI LNNV DTQ
Sbjct: 156 VIHDCRWLSDCLSHQYGILLNNVFDTQ 182

[Close]

BLAST of HG10005025 vs. ExPASy Swiss-Prot
Match: Q6NRD5 (piRNA biogenesis protein EXD1 OS=Xenopus laevis OX=8355 GN=exd1 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.5e-09
Identity = 34/83 (40.96%), Postives = 46/83 (55.42%), Query Frame = 0


Query: 41  VVGFDCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGDELVK-VCKPALESTYVTKVIHD 100
           V+     G ++CRHG L  +Q A    VYL D +  G ++ K   +  LE   + KVIHD
Sbjct: 122 VISIGAVGQNICRHGKLSWLQFATRSRVYLFDVLVLGSKVFKNGLQMVLEDKGILKVIHD 181

Query: 101 CKRDSEALYFQFGIKLNNVIDTQ 123
           C+   + L  Q+GI LNNV DTQ
Sbjct: 182 CRWLGDILSHQYGIILNNVFDTQ 204

[Close]

BLAST of HG10005025 vs. ExPASy Swiss-Prot
Match: P56960 (Exosome component 10 OS=Mus musculus OX=10090 GN=Exosc10 PE=1 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 2.5e-06
Identity = 49/184 (26.63%), Postives = 75/184 (40.76%), Query Frame = 0


Query: 17  PIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRH------GNLCVMQIAFPDAVYL 76
           P H+V+ +    +E VE + +   ++G     VDL  H      G  C+MQI+     ++
Sbjct: 287 PCHLVSSL----DELVELNEK---LLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFI 346

Query: 77  VDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQDP------ 136
           VD ++   ++  +   +L    + KV H    D E L   FG+ + N+ DT         
Sbjct: 347 VDTLELRSDMY-ILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNL 406

Query: 137 -----------------------KFWTYRPLSELMVRAAADDVRFLLYIYHKM----MEK 162
                                    W  RPL E M+  A DD  +LLYIY +M     E+
Sbjct: 407 ARHSLDHLLRLYCGVESNKQYQLADWRIRPLPEEMLSYARDDTHYLLYIYDRMRLELWER 462

[Close]

BLAST of HG10005025 vs. ExPASy Swiss-Prot
Match: Q01780 (Exosome component 10 OS=Homo sapiens OX=9606 GN=EXOSC10 PE=1 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 4.8e-05
Identity = 38/141 (26.95%), Postives = 55/141 (39.01%), Query Frame = 0


Query: 49  VDLCRH------GNLCVMQIAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKR 108
           VDL  H      G  C+MQI+     +++D ++   ++  +   +L    + KV H    
Sbjct: 312 VDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMY-ILNESLTDPAIVKVFHGADS 371

Query: 109 DSEALYFQFGIKLNNVIDTQDP-----------------------------KFWTYRPLS 155
           D E L   FG+ + N+ DT                                  W  RPL 
Sbjct: 372 DIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLP 431

[Close]

BLAST of HG10005025 vs. ExPASy TrEMBL
Match: A0A1S3BAF6 (exosome component 10 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487800 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 6.2e-149
Identity = 264/295 (89.49%), Postives = 269/295 (91.19%), Query Frame = 0


Query: 2   SGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQ 61
           SGENQTDPEA+ATLVPIHIVTHVSQLP EFVEPS EKPLVVGFDCEGVDLCRHGNLCVMQ
Sbjct: 18  SGENQTDPEANATLVPIHIVTHVSQLPKEFVEPSAEKPLVVGFDCEGVDLCRHGNLCVMQ 77

Query: 62  IAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT 121
           IAFPDAVYLVDAVQGG+ELVKVCKPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDT
Sbjct: 78  IAFPDAVYLVDAVQGGEELVKVCKPALESKYVTKVIHDCKRDSEALYFQFGIKLNNVIDT 137

Query: 122 Q--------------------DPKFWTYRPLSELMVRAAADDVRFLLYIYHKMMEKLNHQ 181
           Q                    DPKFWTYRP+SELMVRAAADDVRFLLYIYHKMMEKLNHQ
Sbjct: 138 QVIINCVSYVEKEEVRLLLRKDPKFWTYRPMSELMVRAAADDVRFLLYIYHKMMEKLNHQ 197

Query: 182 SLWYLAVRGALYCRCFCISDNEYADWPPLPSVPDDLVVEGNAPEEEILSVLDVPHGMMGR 241
           SLWYLAVRGALYCRCFCISDN YADWPPLPSVPD+LV EGNAPEEEILSVLDVPHGMMGR
Sbjct: 198 SLWYLAVRGALYCRCFCISDNGYADWPPLPSVPDNLVKEGNAPEEEILSVLDVPHGMMGR 257

Query: 242 VIGRKGASILSIKESCNAEILIGGAKGPPDKVFIIGSVRQVRKAEAMLRGRMLEI 277
           VIGR+GASILSIKESCNAEILIGGAKGPPDKV IIGSVRQVRKAEAMLRGRMLEI
Sbjct: 258 VIGRRGASILSIKESCNAEILIGGAKGPPDKVLIIGSVRQVRKAEAMLRGRMLEI 312

[Close]

BLAST of HG10005025 vs. ExPASy TrEMBL
Match: A0A0A0LN42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G352390 PE=4 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 3.8e-146
Identity = 264/323 (81.73%), Postives = 270/323 (83.59%), Query Frame = 0


Query: 2   SGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQ 61
           SGENQTDPEA+ATLVPIHIVTHVSQLP EFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQ
Sbjct: 18  SGENQTDPEANATLVPIHIVTHVSQLPKEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQ 77

Query: 62  IAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT 121
           IAFPDAVYLVDAVQGG+ELVKVCKPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDT
Sbjct: 78  IAFPDAVYLVDAVQGGEELVKVCKPALESKYVTKVIHDCKRDSEALYFQFGIKLNNVIDT 137

Query: 122 Q------------------------------------------------DPKFWTYRPLS 181
           Q                                                DPKFWTYRP+S
Sbjct: 138 QIAYSLLEEQEGRTKTPDNYISFVSLLADSRYCGVSYVEKEEVRLLLRKDPKFWTYRPMS 197

Query: 182 ELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSV 241
           ELMVRAAADDVRFLLYIYHKMMEKLNH+SLWYLAVRGALYCRCFCISDN YADWPPLPSV
Sbjct: 198 ELMVRAAADDVRFLLYIYHKMMEKLNHRSLWYLAVRGALYCRCFCISDNGYADWPPLPSV 257

Query: 242 PDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKV 277
           PD+LV EGNAPEEEILSVLDVPHGMMGRVIGR+GASILSIKESCNAEILIGGAKGPPDKV
Sbjct: 258 PDNLVKEGNAPEEEILSVLDVPHGMMGRVIGRRGASILSIKESCNAEILIGGAKGPPDKV 317

[Close]

BLAST of HG10005025 vs. ExPASy TrEMBL
Match: A0A5A7UYD1 (PiRNA biogenesis protein EXD1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001180 PE=4 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.1e-145
Identity = 264/323 (81.73%), Postives = 269/323 (83.28%), Query Frame = 0


Query: 2   SGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQ 61
           SGENQTDPEA+ATLVPIHIVTHVSQLP EFVEPS EKPLVVGFDCEGVDLCRHGNLCVMQ
Sbjct: 18  SGENQTDPEANATLVPIHIVTHVSQLPKEFVEPSAEKPLVVGFDCEGVDLCRHGNLCVMQ 77

Query: 62  IAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT 121
           IAFPDAVYLVDAVQGG+ELVKVCKPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDT
Sbjct: 78  IAFPDAVYLVDAVQGGEELVKVCKPALESKYVTKVIHDCKRDSEALYFQFGIKLNNVIDT 137

Query: 122 Q------------------------------------------------DPKFWTYRPLS 181
           Q                                                DPKFWTYRP+S
Sbjct: 138 QIAYSLLEEQEGRTKTPDNYISFVSLLADSRYCGVSYVEKEEVRLLLRKDPKFWTYRPMS 197

Query: 182 ELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSV 241
           ELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDN YADWPPLPSV
Sbjct: 198 ELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNGYADWPPLPSV 257

Query: 242 PDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKV 277
           PD+LV EGNAPEEEILSVLDVPHGMMGRVIGR+GASILSIKESCNAEILIGGAKGPPDKV
Sbjct: 258 PDNLVKEGNAPEEEILSVLDVPHGMMGRVIGRRGASILSIKESCNAEILIGGAKGPPDKV 317

[Close]

BLAST of HG10005025 vs. ExPASy TrEMBL
Match: A0A1S3B9Z5 (piRNA biogenesis protein EXD1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487800 PE=4 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.1e-145
Identity = 264/323 (81.73%), Postives = 269/323 (83.28%), Query Frame = 0


Query: 2   SGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQ 61
           SGENQTDPEA+ATLVPIHIVTHVSQLP EFVEPS EKPLVVGFDCEGVDLCRHGNLCVMQ
Sbjct: 18  SGENQTDPEANATLVPIHIVTHVSQLPKEFVEPSAEKPLVVGFDCEGVDLCRHGNLCVMQ 77

Query: 62  IAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT 121
           IAFPDAVYLVDAVQGG+ELVKVCKPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDT
Sbjct: 78  IAFPDAVYLVDAVQGGEELVKVCKPALESKYVTKVIHDCKRDSEALYFQFGIKLNNVIDT 137

Query: 122 Q------------------------------------------------DPKFWTYRPLS 181
           Q                                                DPKFWTYRP+S
Sbjct: 138 QIAYSLLEEQEGRTKTPDNYISFVSLLADSRYCGVSYVEKEEVRLLLRKDPKFWTYRPMS 197

Query: 182 ELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSV 241
           ELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDN YADWPPLPSV
Sbjct: 198 ELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNGYADWPPLPSV 257

Query: 242 PDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKV 277
           PD+LV EGNAPEEEILSVLDVPHGMMGRVIGR+GASILSIKESCNAEILIGGAKGPPDKV
Sbjct: 258 PDNLVKEGNAPEEEILSVLDVPHGMMGRVIGRRGASILSIKESCNAEILIGGAKGPPDKV 317

[Close]

BLAST of HG10005025 vs. ExPASy TrEMBL
Match: A0A6J1KS25 (piRNA biogenesis protein EXD1-like OS=Cucurbita maxima OX=3661 GN=LOC111495980 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 6.7e-143
Identity = 259/323 (80.19%), Postives = 266/323 (82.35%), Query Frame = 0


Query: 2   SGENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQ 61
           SGENQTDPEA+ATLVPIHIVTH SQLP EFV+PSP K LVVGFDCEGVDLCRHGNLC+MQ
Sbjct: 18  SGENQTDPEANATLVPIHIVTHASQLPKEFVDPSPRKHLVVGFDCEGVDLCRHGNLCIMQ 77

Query: 62  IAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT 121
           IAFPDAVYLVDAVQGG+ELVKVCKPALES YVTKVIHDCKRDSEALYFQFGIKLNNVIDT
Sbjct: 78  IAFPDAVYLVDAVQGGEELVKVCKPALESEYVTKVIHDCKRDSEALYFQFGIKLNNVIDT 137

Query: 122 ------------------------------------------------QDPKFWTYRPLS 181
                                                           QDP FWTYRPLS
Sbjct: 138 QIAYSLIEEQEGRTKLPDNYISFVSLLADSRYCGVSYQEKEEVRLLLRQDPLFWTYRPLS 197

Query: 182 ELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCFCISDNEYADWPPLPSV 241
           ELMVRAAADDVRFLLYIYHKMMEKLN QSLWYLAVRGALYCRCFCISDNEY DWPPLPSV
Sbjct: 198 ELMVRAAADDVRFLLYIYHKMMEKLNQQSLWYLAVRGALYCRCFCISDNEYTDWPPLPSV 257

Query: 242 PDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKV 277
           PD+LVVEGNAPEEEILSVLDVP GMMGRVIGR+G+SILSIKESCNAEILIGGAKGPPDKV
Sbjct: 258 PDNLVVEGNAPEEEILSVLDVPSGMMGRVIGRRGSSILSIKESCNAEILIGGAKGPPDKV 317

[Close]

BLAST of HG10005025 vs. TAIR 10
Match: AT2G25910.1 (3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein )

HSP 1 Score: 409.1 bits (1050), Expect = 2.9e-114
Identity = 199/322 (61.80%), Postives = 237/322 (73.60%), Query Frame = 0


Query: 3   GENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQI 62
           G      EA+   VPI+IVT   QLP +F+ PSPEK LV+GFDCEGVDLCRHG LC+MQI
Sbjct: 19  GGRSPTQEANEPPVPIYIVTDPFQLPADFLNPSPEKKLVIGFDCEGVDLCRHGKLCIMQI 78

Query: 63  AFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT- 122
           AF +A+YLVD ++GG+ ++K CKPALES Y+TKVIHDCKRDSEALYFQFGI+L+NV+DT 
Sbjct: 79  AFSNAIYLVDVIEGGEVIMKACKPALESNYITKVIHDCKRDSEALYFQFGIRLHNVVDTQ 138

Query: 123 -----------------------------------------------QDPKFWTYRPLSE 182
                                                          QDPKFWTYRP++E
Sbjct: 139 IAYSLIEEQEGRRRPLDDYISFVSLLADPRYCGISYEEKEEVRVLMRQDPKFWTYRPMTE 198

Query: 183 LMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCF-CISDNEYADWPPLPSV 242
           LM+RAAADDVRFLLY+YHKMM KLN +SLW+LAVRGALYCRC  C++D ++ADWP +P +
Sbjct: 199 LMIRAAADDVRFLLYLYHKMMGKLNQRSLWHLAVRGALYCRCLCCMNDADFADWPTVPPI 258

Query: 243 PDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKESCNAEILIGGAKGPPDKV 276
           PD+L  E    EEEILSVLDVP G MGRVIGRKGASIL+IKE+CNAEILIGGAKGPPDK+
Sbjct: 259 PDNLKSEDQCLEEEILSVLDVPPGKMGRVIGRKGASILAIKEACNAEILIGGAKGPPDKI 318

[Close]

BLAST of HG10005025 vs. TAIR 10
Match: AT2G25910.2 (3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein )

HSP 1 Score: 404.4 bits (1038), Expect = 7.1e-113
Identity = 199/323 (61.61%), Postives = 237/323 (73.37%), Query Frame = 0


Query: 3   GENQTDPEASATLVPIHIVTHVSQLPNEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQI 62
           G      EA+   VPI+IVT   QLP +F+ PSPEK LV+GFDCEGVDLCRHG LC+MQI
Sbjct: 19  GGRSPTQEANEPPVPIYIVTDPFQLPADFLNPSPEKKLVIGFDCEGVDLCRHGKLCIMQI 78

Query: 63  AFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIKLNNVIDT- 122
           AF +A+YLVD ++GG+ ++K CKPALES Y+TKVIHDCKRDSEALYFQFGI+L+NV+DT 
Sbjct: 79  AFSNAIYLVDVIEGGEVIMKACKPALESNYITKVIHDCKRDSEALYFQFGIRLHNVVDTQ 138

Query: 123 -----------------------------------------------QDPKFWTYRPLSE 182
                                                          QDPKFWTYRP++E
Sbjct: 139 IAYSLIEEQEGRRRPLDDYISFVSLLADPRYCGISYEEKEEVRVLMRQDPKFWTYRPMTE 198

Query: 183 LMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRCF-CISDNEYADWPPLPSV 242
           LM+RAAADDVRFLLY+YHKMM KLN +SLW+LAVRGALYCRC  C++D ++ADWP +P +
Sbjct: 199 LMIRAAADDVRFLLYLYHKMMGKLNQRSLWHLAVRGALYCRCLCCMNDADFADWPTVPPI 258

Query: 243 PDDLVVEGNAPEEEILSVLDVPHGMMGRVIGRKGASILSIKESCN-AEILIGGAKGPPDK 276
           PD+L  E    EEEILSVLDVP G MGRVIGRKGASIL+IKE+CN AEILIGGAKGPPDK
Sbjct: 259 PDNLKSEDQCLEEEILSVLDVPPGKMGRVIGRKGASILAIKEACNSAEILIGGAKGPPDK 318

[Close]

BLAST of HG10005025 vs. TAIR 10
Match: AT1G54440.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )

HSP 1 Score: 50.1 bits (118), Expect = 3.4e-06
Identity = 37/134 (27.61%), Postives = 52/134 (38.81%), Query Frame = 0


Query: 55  GNLCVMQIAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIK 114
           G  C+MQI+     Y+VD  +  D +    +   +     KVIH   RD   L   FGI 
Sbjct: 151 GLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDFGIY 210

Query: 115 LNNVIDT-----------------------------QDPKFWTYRPLSELMVRAAADDVR 160
           + N+ DT                                  W  RPL ++M R A +D  
Sbjct: 211 VCNLFDTGQASRVLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAREDTH 270

[Close]

BLAST of HG10005025 vs. TAIR 10
Match: AT1G54440.2 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )

HSP 1 Score: 50.1 bits (118), Expect = 3.4e-06
Identity = 37/134 (27.61%), Postives = 52/134 (38.81%), Query Frame = 0


Query: 55  GNLCVMQIAFPDAVYLVDAVQGGDELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIK 114
           G  C+MQI+     Y+VD  +  D +    +   +     KVIH   RD   L   FGI 
Sbjct: 151 GLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDFGIY 210

Query: 115 LNNVIDT-----------------------------QDPKFWTYRPLSELMVRAAADDVR 160
           + N+ DT                                  W  RPL ++M R A +D  
Sbjct: 211 VCNLFDTGQASRVLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAREDTH 270

The following BLAST results are available for this feature:

BLAST of HG10005025 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886611.1	5.8e-149	83.28	piRNA biogenesis protein EXD1 isoform X1 [Benincasa hispida]	[more]
XP_008444501.1	1.3e-148	89.49	PREDICTED: exosome component 10 isoform X2 [Cucumis melo]	[more]
XP_038886612.1	1.7e-148	83.23	piRNA biogenesis protein EXD1 isoform X2 [Benincasa hispida]	[more]
XP_004142915.1	7.8e-146	81.73	piRNA biogenesis protein EXD1 [Cucumis sativus] >KGN62409.1 hypothetical protein...	[more]
XP_008444500.1	2.3e-145	81.73	PREDICTED: piRNA biogenesis protein EXD1 isoform X1 [Cucumis melo] >KAA0060983.1...	[more]

BLAST of HG10005025 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8CDF7	1.5e-11	42.53	piRNA biogenesis protein EXD1 OS=Mus musculus OX=10090 GN=Exd1 PE=1 SV=1	[more]
Q8NHP7	5.8e-11	42.53	piRNA biogenesis protein EXD1 OS=Homo sapiens OX=9606 GN=EXD1 PE=1 SV=4	[more]
Q6NRD5	2.5e-09	40.96	piRNA biogenesis protein EXD1 OS=Xenopus laevis OX=8355 GN=exd1 PE=2 SV=1	[more]
P56960	2.5e-06	26.63	Exosome component 10 OS=Mus musculus OX=10090 GN=Exosc10 PE=1 SV=2	[more]
Q01780	4.8e-05	26.95	Exosome component 10 OS=Homo sapiens OX=9606 GN=EXOSC10 PE=1 SV=2	[more]

BLAST of HG10005025 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BAF6	6.2e-149	89.49	exosome component 10 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487800 PE=4 SV=...	[more]
A0A0A0LN42	3.8e-146	81.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G352390 PE=4 SV=1	[more]
A0A5A7UYD1	1.1e-145	81.73	PiRNA biogenesis protein EXD1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3B9Z5	1.1e-145	81.73	piRNA biogenesis protein EXD1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487800...	[more]
A0A6J1KS25	6.7e-143	80.19	piRNA biogenesis protein EXD1-like OS=Cucurbita maxima OX=3661 GN=LOC111495980 P...	[more]

BLAST of HG10005025 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25910.1	2.9e-114	61.80	3'-5' exonuclease domain-containing protein / K homology domain-containing prote...	[more]
AT2G25910.2	7.1e-113	61.61	3'-5' exonuclease domain-containing protein / K homology domain-containing prote...	[more]
AT1G54440.1	3.4e-06	27.61	Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain	[more]
AT1G54440.2	3.4e-06	27.61	Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002562	3'-5' exonuclease domain	SMART	SM00474	35exoneu6	coord: 18..159 e-value: 4.4E-8 score: 42.9
IPR002562	3'-5' exonuclease domain	PFAM	PF01612	DNA_pol_A_exo1	coord: 28..122 e-value: 1.7E-14 score: 53.9
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 206..274 e-value: 9.2E-8 score: 41.8
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 124..173 e-value: 1.9E-7 score: 32.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..123 e-value: 6.1E-25 score: 90.0
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 197..274 e-value: 8.7E-11 score: 43.3
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 203..274
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 212..270 e-value: 8.6E-11 score: 41.5
None	No IPR available	PANTHER	PTHR46814:SF4	SUBFAMILY NOT NAMED	coord: 9..123
None	No IPR available	PANTHER	PTHR46814	EGALITARIAN, ISOFORM B	coord: 122..274 coord: 9..123
None	No IPR available	PANTHER	PTHR46814:SF4	SUBFAMILY NOT NAMED	coord: 122..274
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 207..269 score: 12.1184
None	No IPR available	CDD	cd00105	KH-I	coord: 212..269 e-value: 2.69724E-10 score: 53.3327
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 15..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005025.1	HG10005025.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006139	nucleobase-containing compound metabolic process
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding