HG10004939 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10004939
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCalmodulin
LocationChr08: 21567701 .. 21567979 (-)
RNA-Seq ExpressionHG10004939
SyntenyHG10004939
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAACTCCAAAAGTAAAACTTACAAACGAGTTCTTGTTCCATTCTCCGAGGAGCAACTGGCCGGCGTTTTCAAGAATCACGATCGAGACGGCGACGGGAAGCTGACAAAGGAAGAGTTGAAGCAAGCCTTCAAATATCTTGGCTCACGCTACAGCTCCTTTCGAGTCGATGAAGCCCTACGCGCCGCCGATACCGATGGGGATGGTGCCATCAGCATGGCAGAGATGGGCAAGCTAATTAAGTATGCTAAAACTCGTAAATATACTATTAGTTAA

mRNA sequence

ATGGGGAACTCCAAAAGTAAAACTTACAAACGAGTTCTTGTTCCATTCTCCGAGGAGCAACTGGCCGGCGTTTTCAAGAATCACGATCGAGACGGCGACGGGAAGCTGACAAAGGAAGAGTTGAAGCAAGCCTTCAAATATCTTGGCTCACGCTACAGCTCCTTTCGAGTCGATGAAGCCCTACGCGCCGCCGATACCGATGGGGATGGTGCCATCAGCATGGCAGAGATGGGCAAGCTAATTAAGTATGCTAAAACTCGTAAATATACTATTAGTTAA

Coding sequence (CDS)

ATGGGGAACTCCAAAAGTAAAACTTACAAACGAGTTCTTGTTCCATTCTCCGAGGAGCAACTGGCCGGCGTTTTCAAGAATCACGATCGAGACGGCGACGGGAAGCTGACAAAGGAAGAGTTGAAGCAAGCCTTCAAATATCTTGGCTCACGCTACAGCTCCTTTCGAGTCGATGAAGCCCTACGCGCCGCCGATACCGATGGGGATGGTGCCATCAGCATGGCAGAGATGGGCAAGCTAATTAAGTATGCTAAAACTCGTAAATATACTATTAGTTAA

Protein sequence

MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTIS
Homology
BLAST of HG10004939 vs. NCBI nr
Match: KAA0060899.1 (putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa])

HSP 1 Score: 168.3 bits (425), Expect = 3.1e-38
Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 0

Query: 1  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEA 60
          MGNSKSKTYKRVLVPFSEEQLA VFKNHDRDGDG LTKEELKQAF+YLGSR+S+FRV+EA
Sbjct: 1  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEA 60

Query: 61 LRAADTDGDGAISMAEMGKLIKYAKTRKYTIS 93
          LRAADT+GDG ISM EMGKLIKYAKTRKYTIS
Sbjct: 61 LRAADTNGDGVISMDEMGKLIKYAKTRKYTIS 92

BLAST of HG10004939 vs. NCBI nr
Match: KAG6598376.1 (hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 166.0 bits (419), Expect = 1.5e-37
Identity = 82/91 (90.11%), Postives = 87/91 (95.60%), Query Frame = 0

Query: 1  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEA 60
          MGNSKSKTYKRVLVPFSEEQLA VFKNHD DGDGKLTKEELKQAF YLGSR+SSFRV+EA
Sbjct: 1  MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEA 60

Query: 61 LRAADTDGDGAISMAEMGKLIKYAKTRKYTI 92
          LRAADTDGDG ISMAEMGKLI+YAK+RKYT+
Sbjct: 61 LRAADTDGDGFISMAEMGKLIQYAKSRKYTL 91

BLAST of HG10004939 vs. NCBI nr
Match: KAG7029343.1 (Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 161.0 bits (406), Expect = 4.9e-36
Identity = 80/91 (87.91%), Postives = 85/91 (93.41%), Query Frame = 0

Query: 1  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEA 60
          MGNSKSKTYKRVLVPFSEEQLA VFKNHD DGDGKLTKEELKQAF YLGSR+SSFRV+EA
Sbjct: 1  MGNSKSKTYKRVLVPFSEEQLASVFKNHDGDGDGKLTKEELKQAFDYLGSRFSSFRVEEA 60

Query: 61 LRAADTDGDGAISMAEMGKLIKYAKTRKYTI 92
          LRAAD DGDG ISMAEM KLI+YAK+RKYT+
Sbjct: 61 LRAADIDGDGFISMAEMDKLIQYAKSRKYTL 91

BLAST of HG10004939 vs. NCBI nr
Match: KAG6585662.1 (hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 159.1 bits (401), Expect = 1.9e-35
Identity = 76/91 (83.52%), Postives = 83/91 (91.21%), Query Frame = 0

Query: 1  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEA 60
          MGNSKSKTYKRVLVP +EEQLAG+FK+HDRDGDGKLTKEELKQAF YLGSR+SSFR DEA
Sbjct: 1  MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEA 60

Query: 61 LRAADTDGDGAISMAEMGKLIKYAKTRKYTI 92
          LRAAD DGDG I+MAEM KLI+Y K RKYT+
Sbjct: 61 LRAADADGDGTINMAEMSKLIQYTKNRKYTL 91

BLAST of HG10004939 vs. NCBI nr
Match: KAG7020569.1 (hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 149.8 bits (377), Expect = 1.1e-32
Identity = 73/91 (80.22%), Postives = 81/91 (89.01%), Query Frame = 0

Query: 1  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEA 60
          MGN+KS  YKRVLVPF+EEQLA +FK+HDRDGDGKL+KEELKQAF YLGSR+SSFRV EA
Sbjct: 1  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEA 60

Query: 61 LRAADTDGDGAISMAEMGKLIKYAKTRKYTI 92
          LRAADT+GDG ISM EM KLIKY K RKYT+
Sbjct: 61 LRAADTNGDGFISMDEMNKLIKYTKGRKYTL 91

BLAST of HG10004939 vs. ExPASy Swiss-Prot
Match: P62203 (Calmodulin OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PF14_0323 PE=3 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 1.0e-07
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 0

Query: 17  SEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAE 76
           +EE+L   F+  DRDGDG ++ +EL+     LG + ++  VDE +R AD DGDG I+  E
Sbjct: 82  TEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEE 141

Query: 77  MGKLI 82
             K++
Sbjct: 142 FVKMM 146

BLAST of HG10004939 vs. ExPASy Swiss-Prot
Match: P24044 (Calmodulin OS=Plasmodium falciparum OX=5833 PE=3 SV=4)

HSP 1 Score: 57.4 bits (137), Expect = 1.0e-07
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 0

Query: 17  SEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAE 76
           +EE+L   F+  DRDGDG ++ +EL+     LG + ++  VDE +R AD DGDG I+  E
Sbjct: 82  TEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEE 141

Query: 77  MGKLI 82
             K++
Sbjct: 142 FVKMM 146

BLAST of HG10004939 vs. ExPASy Swiss-Prot
Match: P05933 (Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cam1 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.7e-07
Identity = 28/65 (43.08%), Postives = 39/65 (60.00%), Query Frame = 0

Query: 17  SEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAE 76
           +EE++   FK  D+DG+G +T EEL      LG R S   V + +R ADTDGDG I+  E
Sbjct: 83  NEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEE 142

Query: 77  MGKLI 82
             ++I
Sbjct: 143 FSRVI 147

BLAST of HG10004939 vs. ExPASy Swiss-Prot
Match: P27482 (Calmodulin-like protein 3 OS=Homo sapiens OX=9606 GN=CALML3 PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 5.0e-07
Identity = 25/65 (38.46%), Postives = 41/65 (63.08%), Query Frame = 0

Query: 17  SEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAE 76
           +EE++   F+  D+DG+G ++  EL+     LG + S   VDE +RAADTDGDG ++  E
Sbjct: 82  NEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEE 141

Query: 77  MGKLI 82
             +++
Sbjct: 142 FVRVL 146

BLAST of HG10004939 vs. ExPASy Swiss-Prot
Match: P84339 (Calmodulin OS=Agaricus bisporus OX=5341 PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 5.0e-07
Identity = 26/65 (40.00%), Postives = 39/65 (60.00%), Query Frame = 0

Query: 17  SEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAE 76
           SEE++   FK  D+DG+G ++  EL+     LG + +   VDE +R AD DGDG I+  E
Sbjct: 82  SEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDSEVDEMIREADVDGDGQINYEE 141

Query: 77  MGKLI 82
             K++
Sbjct: 142 FVKMM 146

BLAST of HG10004939 vs. ExPASy TrEMBL
Match: A0A5A7V5B0 (Putative Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00320 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.5e-38
Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 0

Query: 1  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEA 60
          MGNSKSKTYKRVLVPFSEEQLA VFKNHDRDGDG LTKEELKQAF+YLGSR+S+FRV+EA
Sbjct: 1  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEA 60

Query: 61 LRAADTDGDGAISMAEMGKLIKYAKTRKYTIS 93
          LRAADT+GDG ISM EMGKLIKYAKTRKYTIS
Sbjct: 61 LRAADTNGDGVISMDEMGKLIKYAKTRKYTIS 92

BLAST of HG10004939 vs. ExPASy TrEMBL
Match: A0A0A0LRB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357340 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 7.4e-38
Identity = 82/92 (89.13%), Postives = 87/92 (94.57%), Query Frame = 0

Query: 1  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEA 60
          MGNSKSKTYKRVLVPFSEEQLA VFKNHDRDGDG LTKEELKQAF+YLGSR+ +FRV+EA
Sbjct: 1  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEA 60

Query: 61 LRAADTDGDGAISMAEMGKLIKYAKTRKYTIS 93
          LRAADT+GDG ISM EMGKLIKYAKTRKYTIS
Sbjct: 61 LRAADTNGDGVISMDEMGKLIKYAKTRKYTIS 92

BLAST of HG10004939 vs. ExPASy TrEMBL
Match: A0A7N2KRS3 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.9e-19
Identity = 47/87 (54.02%), Postives = 66/87 (75.86%), Query Frame = 0

Query: 5   KSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAA 64
           K+  +KR  VPF+E+QL  +FK+HD DGDGKL+++ELK AFKYLGSR+ ++R D+ALR A
Sbjct: 234 KAMAFKRTSVPFNEQQLLNIFKSHDVDGDGKLSRDELKNAFKYLGSRWDAYRTDQALRQA 293

Query: 65  DTDGDGAISMAEMGKLIKYAKTRKYTI 92
           D + DG I+  E+ KL++YA    YT+
Sbjct: 294 DANDDGYITEDELKKLVEYALDCGYTV 320

BLAST of HG10004939 vs. ExPASy TrEMBL
Match: A0A2N9FYQ0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20260 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.9e-18
Identity = 45/87 (51.72%), Postives = 65/87 (74.71%), Query Frame = 0

Query: 5  KSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAA 64
          K  ++KR  +PF+EEQL  +FK+HD DGDGKL+++E+K+AFKYLGSR+ ++R ++A+  A
Sbjct: 4  KVMSFKRTTIPFTEEQLMNIFKSHDADGDGKLSQDEVKKAFKYLGSRWDAYRANQAIHLA 63

Query: 65 DTDGDGAISMAEMGKLIKYAKTRKYTI 92
          D D DG I   E+ KL++YA    YTI
Sbjct: 64 DADDDGYIEEEELKKLVQYALDCGYTI 90

BLAST of HG10004939 vs. ExPASy TrEMBL
Match: A0A0A0LP43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357350 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.9e-16
Identity = 46/83 (55.42%), Postives = 58/83 (69.88%), Query Frame = 0

Query: 1  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEA 60
          MG S    +K      +E ++A VFKNHD+DGDG+LTKEELK AFKYLG ++++FRV +A
Sbjct: 1  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQA 60

Query: 61 LRAADTDGDGAISMAEMGKLIKY 84
          L AAD + D  IS  EM KLI Y
Sbjct: 61 LHAADDNCDDVISFEEMSKLIMY 83

BLAST of HG10004939 vs. TAIR 10
Match: AT5G12180.1 (calcium-dependent protein kinase 17 )

HSP 1 Score: 53.9 bits (128), Expect = 7.9e-08
Identity = 29/79 (36.71%), Postives = 41/79 (51.90%), Query Frame = 0

Query: 1   MGNSKSKTYKRVLVPFSEEQLAG---VFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRV 60
           M N K    + +    SEE++ G   +FK  D D  G +T EEL+Q     G+R S + V
Sbjct: 356 MNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQGTRLSEYEV 415

Query: 61  DEALRAADTDGDGAISMAE 77
            + + AAD DG+G I   E
Sbjct: 416 QQLMEAADADGNGTIDYGE 434

BLAST of HG10004939 vs. TAIR 10
Match: AT5G19360.1 (calcium-dependent protein kinase 34 )

HSP 1 Score: 53.9 bits (128), Expect = 7.9e-08
Identity = 29/79 (36.71%), Postives = 41/79 (51.90%), Query Frame = 0

Query: 1   MGNSKSKTYKRVLVPFSEEQLAG---VFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRV 60
           M N K    + +    SEE++ G   +FK  D D  G +T EEL+Q     G+R S + V
Sbjct: 351 MNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQGTRLSEYEV 410

Query: 61  DEALRAADTDGDGAISMAE 77
            + + AAD DG+G I   E
Sbjct: 411 QQLMEAADADGNGTIDYGE 429

BLAST of HG10004939 vs. TAIR 10
Match: AT4G03290.1 (EF hand calcium-binding protein family )

HSP 1 Score: 52.4 bits (124), Expect = 2.3e-07
Identity = 24/63 (38.10%), Postives = 39/63 (61.90%), Query Frame = 0

Query: 20 QLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGK 79
          +L  VF+  D+DGDGK+T +EL ++FK LG       + + ++  D +GDG + + E G+
Sbjct: 5  ELNRVFQMFDKDGDGKITTKELNESFKNLGIIIPEDELTQIIQKIDVNGDGCVDIEEFGE 64

Query: 80 LIK 83
          L K
Sbjct: 65 LYK 67

BLAST of HG10004939 vs. TAIR 10
Match: AT4G04695.1 (calcium-dependent protein kinase 31 )

HSP 1 Score: 52.4 bits (124), Expect = 2.3e-07
Identity = 30/79 (37.97%), Postives = 40/79 (50.63%), Query Frame = 0

Query: 1   MGNSKSKTYKRVLVPFSEEQLAG---VFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRV 60
           M   K    K +    SEE++ G   +F N D D  G +T EELK     LGS  S   V
Sbjct: 314 MNKLKKVALKVIAANLSEEEIKGLKTLFTNIDTDKSGTITLEELKTGLTRLGSNLSKTEV 373

Query: 61  DEALRAADTDGDGAISMAE 77
           ++ + AAD DG+G I + E
Sbjct: 374 EQLMEAADVDGNGTIDIDE 392

BLAST of HG10004939 vs. TAIR 10
Match: AT4G04720.1 (calcium-dependent protein kinase 21 )

HSP 1 Score: 52.0 bits (123), Expect = 3.0e-07
Identity = 31/79 (39.24%), Postives = 39/79 (49.37%), Query Frame = 0

Query: 1   MGNSKSKTYKRVLVPFSEEQLAG---VFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRV 60
           M   K    K +    SEE++ G   +F N D D  G +T EELK     LGSR S   V
Sbjct: 362 MNKLKKLALKVIAESLSEEEIKGLKTMFANIDTDKSGTITYEELKTGLTRLGSRLSETEV 421

Query: 61  DEALRAADTDGDGAISMAE 77
            + + AAD DG+G I   E
Sbjct: 422 KQLMEAADVDGNGTIDYYE 440

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0060899.13.1e-3890.22putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa][more]
KAG6598376.11.5e-3790.11hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7029343.14.9e-3687.91Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosper... [more]
KAG6585662.11.9e-3583.52hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7020569.11.1e-3280.22hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
P622031.0e-0741.54Calmodulin OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PF14_0323 PE=3 SV=... [more]
P240441.0e-0741.54Calmodulin OS=Plasmodium falciparum OX=5833 PE=3 SV=4[more]
P059331.7e-0743.08Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=c... [more]
P274825.0e-0738.46Calmodulin-like protein 3 OS=Homo sapiens OX=9606 GN=CALML3 PE=1 SV=2[more]
P843395.0e-0740.00Calmodulin OS=Agaricus bisporus OX=5341 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A5A7V5B01.5e-3890.22Putative Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A0A0LRB67.4e-3889.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357340 PE=4 SV=1[more]
A0A7N2KRS35.9e-1954.02Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A2N9FYQ02.9e-1851.72Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20260 PE=4 SV=1[more]
A0A0A0LP437.9e-1655.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357350 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G12180.17.9e-0836.71calcium-dependent protein kinase 17 [more]
AT5G19360.17.9e-0836.71calcium-dependent protein kinase 34 [more]
AT4G03290.12.3e-0738.10EF hand calcium-binding protein family [more]
AT4G04695.12.3e-0737.97calcium-dependent protein kinase 31 [more]
AT4G04720.13.0e-0739.24calcium-dependent protein kinase 21 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 20..48
e-value: 0.025
score: 23.7
coord: 56..84
e-value: 0.3
score: 20.2
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 18..80
e-value: 3.2E-12
score: 46.7
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 52..87
score: 11.277538
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 16..51
score: 15.433954
IPR002048EF-hand domainCDDcd00051EFhcoord: 20..82
e-value: 1.59303E-14
score: 60.2541
NoneNo IPR availableGENE3D1.10.238.10coord: 2..87
e-value: 1.2E-16
score: 63.1
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 10..85
NoneNo IPR availablePANTHERPTHR10891:SF911SUBFAMILY NOT NAMEDcoord: 10..85
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 29..41
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 65..77
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 8..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10004939.1HG10004939.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding