HG10004915 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004915
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	polyadenylate-binding protein RBP47-like
Location	Chr08: 21394553 .. 21397951 (-)
RNA-Seq Expression	HG10004915
Synteny	HG10004915

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATCGAACGGCCCTGATTCGCAGCCGCAGCAGCAGGCGGCGCATCAGACAGAGCAGAATCAGCAAACGCACAAACAGCCGCAGCCGCAGCGGTGGATGGCGATGCAGTATCCGGCGGCCGCGATGATAATGCAGCACCCGATGATGCCGCCGCAGCATTACGTGCCTCCGTCTTCGCCGCACTATATCCCATACCGTCAATACCCGCCGCCGCATCAGCTTAATGGCCAGCAGCACCAGCAGCCACACCAGGGTTCCACCAGCGAGAACAAGACTATTTGGGTCGGCGATTTGCAGCATTGGATGGATGAGAATTACCTCCATAGCTGCTTCGCTTCCACCGGCGAGGTTTCCAATTTTACTATTGCGATTTATGTTTTTATTTTTTTTCTTTTCATGTCAGAATATTAACGTATACTGATTCGTTTATTGGCATTTTATTAGCACCTACTGTTTTGGATTTGTTTGGCTAATTTTGTTAACTGTCACTAGTGTCATTTAGCTTACTCAATATAGATAAGGAAAATTTTGATGAAATAACTCGAGGGTTGTTAACAGCAATATTGTCAGGATTTTATTTTTAAATTTTATGTCTGCAAGTCATTGTTTTTGCAGTCAGTCTTAACAGGTTTACTATTTTTGTTAGGGGAGCCTGCTTGGAGAAAACTGCAAAACTCTTACTTGGATCTGTTGTTATTATCAGATTAGATACTTTATTTAATTCTAGAGCATTTATCATCAACTAGGGCCCGAATTTGTTTAGTCAATGCACCATTTTGTTTTACTTTGCATTCCTAAAATGATATTTTATACTATATATGTTATGTTTTCCTCAATTGTTACGTTCTAATTTCTATGTTATTGAATGAAACAAGTTGTGTAAACTTTATTTTTTTCCTTTTAGTCTCATTATTTAATTTCGTTCAGATACTTTAGGATAAAGAAATAGATAAATTAAGCAGTGTATAAATCTAAGAGTAAGAATATCTGAATATGTTGGAGGCATGTCGGCCCATTTGGGATTCCTATATCATCAAGTACCAACACTTTACTAATTTCATTGAAGTGAAAGATGAATAGGCTGATTTTTTCTTCCTTATATTTCTTTTTGATTTTGTGATTTTAACTAATAACGTATTGGTCACTATGCACGTTCCAGTTTATATTTGATCACGATTTCTAAATGAAAGTATTTTGACATATTATTATTCAATAAAGTATGATTTGGTACTGGCCAAGTTGTTGTTGTTTTCTTTGTGTGTGCGTGTTTCTTGTGTCTTTTACAGTACGAATGTTCCTTGTCTATTGATTTGTTTCGTTTCTTAGAAAAGAATCTATCAAAGGAATCCTCTAAGAGGACGTGTTGTTGGCTTTTGGTCTTTTTCTTGACTGTCTTTCTTGTATTCTCTTTAAGCACATTTCTTATGTCCCATGCTTTACGTAATTATTACATGCAGATTTCTTCCCTTAAAGTCATTCGTAATAAGCAAACTGGTATATCAGAAGGCTATGGATTTGTAGAATTTTTCTCTCATAACACAGCAGAGAAAGTTCTGCAGAACTATTCTTCAATTTTGATGCCTAATACTGAGCAAGCTTTCCGGCTAAACTGGGCAACATTTAGCACTGGCGACAAGCGTTCAGAAAATGGTTCTGATCTTTCTATTTTTGTAGGAGATTTAGCAGCGGATGTTACTGACAGTGTACTGCATGAAACTTTTGCTAGTAAATATTCATCTGTCAAAGCAGCAAAAGTTGTCTATGATCCAAATACTGGTTGTTCAAAAGGTTATGGTTTTGTAAGGTTTGGTGATGATAATGAGAGGTCTCAGGCCATGACTGAAATGAATGGCATATATTGCTCAAGCAGGCCTATGCGCATTGGTGCAGCGACACCCAAAAAGTCATCTGGATATCAGCAGCAATATTCTTCACAAGGTATGTAGTACTTTGTTGTAATTATTTGCTCATAAACAATAATGAATCCATTTGCACAGTTTTGAGTCAATATTTATCACGTCCTTAAAAGGGCCTTTTATACTGGGGGCATCGTATATGTGTCAAGGTTGTGGTGTAATTTTATAAGGACTCCGGACTAACCCTTGGCAAATTAAGCTGCTCATACATCAGCTATAACTTTATATTGTCTTGGTATTAGGATATGCATCAAATGGTTCATTCTCCCATGGACACCAGTCTGATGGAGATTTTACAAATACAACTGTGAGTTGGATTGCTTCATTTTGTCTTTCATAATATCAATTGTTATTTCTCTTGCTAATTCTCTCTTGTTCTTCCTTTTCTTGTTTTTCTCTTCGTCTTGGTTTTGGGGGATGTGTGTAAAGATATTCATTGGAGGGCTTGATCCAAATGTTACTGATGACGATCTTAAGCAGCTCTTTTCTCAGCATGGAGACATAGTATCTGTTAAAATACCAGTTGGAAAAGGTTGTGGTTTCATCCAATTTGCAAACAGGTGAACTTCATGTGCCACGAGTCTTTTGACCATATACGAAGAGTGAGTTTTTAGTTTCTTCATCCGTTTCAATTACTCACTATTCTTTAATTCTGCCATGTAGAAAGAATGCTGAAGAGGCATTGCAGAAACTAAATGGAACTGTGATCGGCAAGCAAACAGTACGTCTTTCTTGGGGACGTAGTCCAACAAATAAGCAGGTAATTCTCTTTTGTGTGTGTGTGTGAAAATAGTGAAAACATACAACTACCCCAATTTTCAGGCTAGGAGATGCTTATGAAAAGCTATTCTCCCCCAGTTTCTACTTACATGGTAGTTAGCAAATTTATCATTCCTTTTTTTTTGTGTCTGCTCTGTTTTTCTAGTTGTATAAGAAATGTAAATTCAACTACAACTATCATGCGCTACGTAATTTGAAGGGACAACTGGAAATATCCCTCTCAAATTATAATACCAGGATTTACTAAATAACCCATATGAAATATTACTACCTTCAGCATTTAGGAAGGGAATAAAAAGTCCCTATTGTGAGATCCCACAGAATCTTTACCATATGAAATATACAGAGGTAGAGAATGGAATAAAGGAAGGAAATAGAAGGAAATATGTTTAGAACTTCCCTGGTGAACGGTGATGGTTTTATTGAGTAAGTAGTGTATATTAGGTGCTTTCTACTTGAAATATTGGTATACTAGCTGATTAAATATCTGTTCTCTATATTGAATATCTTATAACTAGTACTTCTCTATTGACAGTACCGAGCTGATTATGGTAACCACTGGAGTGGAGCCTACTATGGAGGACAAATGTATGGCGGATATGGATATGCTCTGCCGCTACCTTATGATCCACCAACCATGTATGCTGCAGCATATGGAGCTTACCCTATGTATGGCACCCATCAACAGCAAGTGAACTGA

mRNA sequence

ATGCCATCGAACGGCCCTGATTCGCAGCCGCAGCAGCAGGCGGCGCATCAGACAGAGCAGAATCAGCAAACGCACAAACAGCCGCAGCCGCAGCGGTGGATGGCGATGCAGTATCCGGCGGCCGCGATGATAATGCAGCACCCGATGATGCCGCCGCAGCATTACGTGCCTCCGTCTTCGCCGCACTATATCCCATACCGTCAATACCCGCCGCCGCATCAGCTTAATGGCCAGCAGCACCAGCAGCCACACCAGGGTTCCACCAGCGAGAACAAGACTATTTGGGTCGGCGATTTGCAGCATTGGATGGATGAGAATTACCTCCATAGCTGCTTCGCTTCCACCGGCGAGTACGAATGTTCCTTGTCTATTGATTTGTTTCGTTTCTTAGAAAAGAATCTATCAAAGGAATCCTCTAAGAGGACGTGTTGTTGGCTTTTGGTCTTTTTCTTGACTGTCTTTCTTGTATTCTCTTTAAGCACATTTCTTATGTCCCATGCTTTACGTAATTATTACATGCAGATTTCTTCCCTTAAAGTCATTCGTAATAAGCAAACTGGTATATCAGAAGGCTATGGATTTGTAGAATTTTTCTCTCATAACACAGCAGAGAAAGTTCTGCAGAACTATTCTTCAATTTTGATGCCTAATACTGAGCAAGCTTTCCGGCTAAACTGGGCAACATTTAGCACTGGCGACAAGCGTTCAGAAAATGGTTCTGATCTTTCTATTTTTGTAGGAGATTTAGCAGCGGATGTTACTGACAGTGTACTGCATGAAACTTTTGCTAGTAAATATTCATCTGTCAAAGCAGCAAAAGTTGTCTATGATCCAAATACTGGTTGTTCAAAAGGTTATGGTTTTGTAAGGTTTGGTGATGATAATGAGAGGTCTCAGGCCATGACTGAAATGAATGGCATATATTGCTCAAGCAGGCCTATGCGCATTGGTGCAGCGACACCCAAAAAGTCATCTGGATATCAGCAGCAATATTCTTCACAAGGATATGCATCAAATGGTTCATTCTCCCATGGACACCAGTCTGATGGAGATTTTACAAATACAACTATATTCATTGGAGGGCTTGATCCAAATGTTACTGATGACGATCTTAAGCAGCTCTTTTCTCAGCATGGAGACATAGTATCTGTTAAAATACCAGTTGGAAAAGGTTGTGGTTTCATCCAATTTGCAAACAGAAAGAATGCTGAAGAGGCATTGCAGAAACTAAATGGAACTGTGATCGGCAAGCAAACAGTACGTCTTTCTTGGGGACGTAGTCCAACAAATAAGCAGTACCGAGCTGATTATGGTAACCACTGGAGTGGAGCCTACTATGGAGGACAAATGTATGGCGGATATGGATATGCTCTGCCGCTACCTTATGATCCACCAACCATGTATGCTGCAGCATATGGAGCTTACCCTATGTATGGCACCCATCAACAGCAAGTGAACTGA

Coding sequence (CDS)

ATGCCATCGAACGGCCCTGATTCGCAGCCGCAGCAGCAGGCGGCGCATCAGACAGAGCAGAATCAGCAAACGCACAAACAGCCGCAGCCGCAGCGGTGGATGGCGATGCAGTATCCGGCGGCCGCGATGATAATGCAGCACCCGATGATGCCGCCGCAGCATTACGTGCCTCCGTCTTCGCCGCACTATATCCCATACCGTCAATACCCGCCGCCGCATCAGCTTAATGGCCAGCAGCACCAGCAGCCACACCAGGGTTCCACCAGCGAGAACAAGACTATTTGGGTCGGCGATTTGCAGCATTGGATGGATGAGAATTACCTCCATAGCTGCTTCGCTTCCACCGGCGAGTACGAATGTTCCTTGTCTATTGATTTGTTTCGTTTCTTAGAAAAGAATCTATCAAAGGAATCCTCTAAGAGGACGTGTTGTTGGCTTTTGGTCTTTTTCTTGACTGTCTTTCTTGTATTCTCTTTAAGCACATTTCTTATGTCCCATGCTTTACGTAATTATTACATGCAGATTTCTTCCCTTAAAGTCATTCGTAATAAGCAAACTGGTATATCAGAAGGCTATGGATTTGTAGAATTTTTCTCTCATAACACAGCAGAGAAAGTTCTGCAGAACTATTCTTCAATTTTGATGCCTAATACTGAGCAAGCTTTCCGGCTAAACTGGGCAACATTTAGCACTGGCGACAAGCGTTCAGAAAATGGTTCTGATCTTTCTATTTTTGTAGGAGATTTAGCAGCGGATGTTACTGACAGTGTACTGCATGAAACTTTTGCTAGTAAATATTCATCTGTCAAAGCAGCAAAAGTTGTCTATGATCCAAATACTGGTTGTTCAAAAGGTTATGGTTTTGTAAGGTTTGGTGATGATAATGAGAGGTCTCAGGCCATGACTGAAATGAATGGCATATATTGCTCAAGCAGGCCTATGCGCATTGGTGCAGCGACACCCAAAAAGTCATCTGGATATCAGCAGCAATATTCTTCACAAGGATATGCATCAAATGGTTCATTCTCCCATGGACACCAGTCTGATGGAGATTTTACAAATACAACTATATTCATTGGAGGGCTTGATCCAAATGTTACTGATGACGATCTTAAGCAGCTCTTTTCTCAGCATGGAGACATAGTATCTGTTAAAATACCAGTTGGAAAAGGTTGTGGTTTCATCCAATTTGCAAACAGAAAGAATGCTGAAGAGGCATTGCAGAAACTAAATGGAACTGTGATCGGCAAGCAAACAGTACGTCTTTCTTGGGGACGTAGTCCAACAAATAAGCAGTACCGAGCTGATTATGGTAACCACTGGAGTGGAGCCTACTATGGAGGACAAATGTATGGCGGATATGGATATGCTCTGCCGCTACCTTATGATCCACCAACCATGTATGCTGCAGCATATGGAGCTTACCCTATGTATGGCACCCATCAACAGCAAGTGAACTGA

Protein sequence

MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPSSPHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGEYECSLSIDLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRNYYMQISSLKVIRNKQTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIGGLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTVRLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMYGTHQQQVN

Homology

[Close]

BLAST of HG10004915 vs. NCBI nr
Match: XP_008444645.1 (PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis melo] >KAA0060870.1 polyadenylate-binding protein RBP47-like [Cucumis melo var. makuwa])

HSP 1 Score: 839.7 bits (2168), Expect = 1.3e-239
Identity = 425/486 (87.45%), Postives = 427/486 (87.86%), Query Frame = 0


Query: 1   MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPSS 60
           MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPP S
Sbjct: 1   MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPPS 60

Query: 61  PHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGEYEC 120
           PHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGE   
Sbjct: 61  PHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGE--- 120

Query: 121 SLSIDLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRNYYMQISSLKV 180
                                                                 ISSLKV
Sbjct: 121 ------------------------------------------------------ISSLKV 180

Query: 181 IRNKQTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGS 240
           IRNKQTGISEGYGFVEFFSH TAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGS
Sbjct: 181 IRNKQTGISEGYGFVEFFSHTTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGS 240

Query: 241 DLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQA 300
           DLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQA
Sbjct: 241 DLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQA 300

Query: 301 MTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIG 360
           MTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIG
Sbjct: 301 MTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIG 360

Query: 361 GLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTV 420
           GLDPNVTD+DLKQLFSQHG+IVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTV
Sbjct: 361 GLDPNVTDEDLKQLFSQHGEIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTV 420

Query: 421 RLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMYGT 480
           RLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMYGT
Sbjct: 421 RLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMYGT 429

Query: 481 HQQQVN 487
           HQQQVN
Sbjct: 481 HQQQVN 429

[Close]

BLAST of HG10004915 vs. NCBI nr
Match: XP_004152729.1 (polyadenylate-binding protein RBP47 [Cucumis sativus] >KGN62542.1 hypothetical protein Csa_022317 [Cucumis sativus])

HSP 1 Score: 836.6 bits (2160), Expect = 1.1e-238
Identity = 423/486 (87.04%), Postives = 426/486 (87.65%), Query Frame = 0


Query: 1   MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPSS 60
           MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPP S
Sbjct: 1   MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPPS 60

Query: 61  PHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGEYEC 120
           PHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGE   
Sbjct: 61  PHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGE--- 120

Query: 121 SLSIDLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRNYYMQISSLKV 180
                                                                 ISSLKV
Sbjct: 121 ------------------------------------------------------ISSLKV 180

Query: 181 IRNKQTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGS 240
           IRNKQTGISEGYGFVEFFSH TAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGS
Sbjct: 181 IRNKQTGISEGYGFVEFFSHTTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGS 240

Query: 241 DLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQA 300
           DLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQA
Sbjct: 241 DLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQA 300

Query: 301 MTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIG 360
           MTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIG
Sbjct: 301 MTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIG 360

Query: 361 GLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTV 420
           GLDPNVTD+DLKQLFSQHG+IVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTV
Sbjct: 361 GLDPNVTDEDLKQLFSQHGEIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTV 420

Query: 421 RLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMYGT 480
           RLSWGRSPTNKQYR DYGNHWSGAYYGGQ+YGGYGYALPLPYDPPTMYAAAYGAYPMYGT
Sbjct: 421 RLSWGRSPTNKQYRGDYGNHWSGAYYGGQVYGGYGYALPLPYDPPTMYAAAYGAYPMYGT 429

Query: 481 HQQQVN 487
           HQQQVN
Sbjct: 481 HQQQVN 429

[Close]

BLAST of HG10004915 vs. NCBI nr
Match: XP_038885237.1 (polyadenylate-binding protein RBP47-like [Benincasa hispida])

HSP 1 Score: 830.1 bits (2143), Expect = 9.9e-237
Identity = 423/488 (86.68%), Postives = 425/488 (87.09%), Query Frame = 0


Query: 1   MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPSS 60
           MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPM+PPQHYVPP S
Sbjct: 1   MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMIPPQHYVPPPS 60

Query: 61  PHYIPYRQY--PPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGEY 120
           PHYIPYRQY  PPPHQ+NGQQHQQ HQGSTSENKTIWVGDLQHWMDENYLHSCFASTGE 
Sbjct: 61  PHYIPYRQYPPPPPHQINGQQHQQQHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGE- 120

Query: 121 ECSLSIDLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRNYYMQISSL 180
                                                                   ISSL
Sbjct: 121 --------------------------------------------------------ISSL 180

Query: 181 KVIRNKQTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSEN 240
           KVIRNKQTGISEGYGFVEFFSH TAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSEN
Sbjct: 181 KVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSEN 240

Query: 241 GSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERS 300
           GSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERS
Sbjct: 241 GSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERS 300

Query: 301 QAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIF 360
           QAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIF
Sbjct: 301 QAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIF 360

Query: 361 IGGLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQ 420
           IGGLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNG VIGKQ
Sbjct: 361 IGGLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGIVIGKQ 420

Query: 421 TVRLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMY 480
           TVRLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMY
Sbjct: 421 TVRLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMY 431

Query: 481 GTHQQQVN 487
           GTHQQQVN
Sbjct: 481 GTHQQQVN 431

[Close]

BLAST of HG10004915 vs. NCBI nr
Match: XP_022144139.1 (polyadenylate-binding protein RBP47-like [Momordica charantia])

HSP 1 Score: 794.3 bits (2050), Expect = 6.0e-226
Identity = 405/491 (82.48%), Postives = 415/491 (84.52%), Query Frame = 0


Query: 1   MPSNGPDSQPQQQAAHQTEQNQQTHK----QPQPQRWMAMQYPAAAMIMQHPMMPPQHYV 60
           MPSNGPDSQPQQQ AHQTEQNQQ +K    QPQPQRWMAMQYPAAAMIMQHPMMPPQHYV
Sbjct: 1   MPSNGPDSQPQQQPAHQTEQNQQQNKQPQPQPQPQRWMAMQYPAAAMIMQHPMMPPQHYV 60

Query: 61  PPSSPHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTG 120
           PP SPHY+PYRQYPPPHQLNGQQHQ PHQGSTSENKTIWVGDL HWMDENYLHSCFASTG
Sbjct: 61  PPPSPHYMPYRQYPPPHQLNGQQHQPPHQGSTSENKTIWVGDLHHWMDENYLHSCFASTG 120

Query: 121 EYECSLSIDLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRNYYMQIS 180
           E                                                         IS
Sbjct: 121 E---------------------------------------------------------IS 180

Query: 181 SLKVIRNKQTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRS 240
           S+KVIRNKQTGISEGYGFVEFFSH TAEKVLQNYS+ILMPNTEQ FRLNWATFSTGDKRS
Sbjct: 181 SIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRS 240

Query: 241 ENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNE 300
           ENGSDLSIFVGDLAADVTDS+LHETFASKY SVKAAKVVYDPNTGCSKGYGFVRFGDDNE
Sbjct: 241 ENGSDLSIFVGDLAADVTDSLLHETFASKYPSVKAAKVVYDPNTGCSKGYGFVRFGDDNE 300

Query: 301 RSQAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTT 360
           RSQAM EMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSF+HGHQSDGD TNTT
Sbjct: 301 RSQAMAEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT 360

Query: 361 IFIGGLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIG 420
           IFIGGLDPNVTD+DL+QLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNG VIG
Sbjct: 361 IFIGGLDPNVTDEDLRQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGAVIG 420

Query: 421 KQTVRLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMY-AAAYGAY 480
           KQTVRLSWGRSP NKQYRADY NHW+G YYGGQ+YGGYGYALPLPYDPPTMY AAAYGAY
Sbjct: 421 KQTVRLSWGRSPANKQYRADYNNHWNGTYYGGQVYGGYGYALPLPYDPPTMYAAAAYGAY 434

Query: 481 PMYGTHQQQVN 487
           PMYGTHQQQVN
Sbjct: 481 PMYGTHQQQVN 434

[Close]

BLAST of HG10004915 vs. NCBI nr
Match: XP_022951380.1 (polyadenylate-binding protein RBP47-like [Cucurbita moschata] >XP_022951381.1 polyadenylate-binding protein RBP47-like [Cucurbita moschata])

HSP 1 Score: 730.7 bits (1885), Expect = 8.2e-207
Identity = 383/495 (77.37%), Postives = 400/495 (80.81%), Query Frame = 0


Query: 1   MPSNGPDSQPQQQAAHQTEQNQQTHKQPQ------PQRWMAMQYPAAAMIMQHPMMPPQH 60
           MPSNGPDSQ QQQ+AH TEQNQQ HKQPQ      PQ WMAMQY AA MIM  PMMPPQH
Sbjct: 1   MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQH 60

Query: 61  YVPPSSPHYIPYRQYPPPHQLNGQQHQQ-PHQGSTSENKTIWVGDLQHWMDENYLHSCFA 120
           Y+P SSPH IPY +  PPHQ+NGQQHQQ PHQ STSENKTIWVGDLQHWMDENYLHSCFA
Sbjct: 61  YMPLSSPHRIPYGR--PPHQVNGQQHQQPPHQESTSENKTIWVGDLQHWMDENYLHSCFA 120

Query: 121 STGEYECSLSIDLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRNYYM 180
           STGE                                                        
Sbjct: 121 STGE-------------------------------------------------------- 180

Query: 181 QISSLKVIRNKQTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFSTGD 240
            +SS+KVIRNKQTGISEGYGFVEF SH TAEKVL NYS++LMPNTE  FRLNWAT STGD
Sbjct: 181 -VSSIKVIRNKQTGISEGYGFVEFLSHTTAEKVLHNYSTVLMPNTELTFRLNWATSSTGD 240

Query: 241 KRSENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 300
           KRSE GSDLSIFVGDLAADVTDS+L ETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD
Sbjct: 241 KRSEKGSDLSIFVGDLAADVTDSILQETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 300

Query: 301 DNERSQAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFT 360
           DNERSQAMT+MNG+YCSSRPMRIGAATPKKSSGYQ QYSSQGY SNGSF+HGHQSDGD T
Sbjct: 301 DNERSQAMTDMNGVYCSSRPMRIGAATPKKSSGYQHQYSSQGYGSNGSFTHGHQSDGDST 360

Query: 361 NTTIFIGGLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGT 420
           NTTIFIGGLDPNVTDDDL+QLFSQHGDIVSVKIP+GKGCGFIQFANRKNAEEALQKLNGT
Sbjct: 361 NTTIFIGGLDPNVTDDDLRQLFSQHGDIVSVKIPIGKGCGFIQFANRKNAEEALQKLNGT 420

Query: 421 VIGKQTVRLSWGRSPTNKQYRADYGNHWSG-AYYGGQMYGGYGYALPLPYDPPTMYAAA- 480
            IGKQTVRLSWGRSP NKQ+RADY N WSG AYYGGQMYGGYGYA+PLPYDPPTMYAAA 
Sbjct: 421 EIGKQTVRLSWGRSPANKQHRADYSNQWSGAAYYGGQMYGGYGYAMPLPYDPPTMYAAAS 436

Query: 481 YGAYPMYGTHQQQVN 487
           YGAYPMYGTHQQQV+
Sbjct: 481 YGAYPMYGTHQQQVS 436

[Close]

BLAST of HG10004915 vs. ExPASy Swiss-Prot
Match: Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 5.3e-132
Identity = 272/497 (54.73%), Postives = 323/497 (64.99%), Query Frame = 0


Query: 4   NGPD---SQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPSS 63
           NG D    Q QQQ  HQ +Q Q    Q   Q+WMAMQYPAAAM MQ  MM  Q Y+P   
Sbjct: 2   NGGDMNQQQQQQQQQHQQQQQQWLAMQQYQQQWMAMQYPAAAMAMQQQMMYGQQYMP--- 61

Query: 64  PHYIPYRQYPPPHQLNGQQHQQPH--QGSTSENKTIWVGDLQHWMDENYLHSCFASTGEY 123
                   Y   HQ   +  Q P   Q S+ +NKTIW+GDLQ WMDE+YLHSCF+  GE 
Sbjct: 62  --------YYQQHQQQQKMQQSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGE- 121

Query: 124 ECSLSIDLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRNYYMQISSL 183
                                                                   + S+
Sbjct: 122 --------------------------------------------------------VISV 181

Query: 184 KVIRNKQTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSEN 243
           K+IRNKQTG SE YGFVEF +H  AEKVLQ+Y+  +MPNTEQ FRLNWA FSTG+KR+E 
Sbjct: 182 KIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAET 241

Query: 244 GSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERS 303
           GSD SIFVGDLA+DVTD++L +TFAS+Y S+K AKVV D NTG SKGYGFVRFGD++ERS
Sbjct: 242 GSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERS 301

Query: 304 QAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQ------GYASNGSFSHGHQSDGDF 363
           +AMTEMNG+YCSSR MRIG ATPKK S + +QYSSQ      GYASNG+ +HG QSDGD 
Sbjct: 302 RAMTEMNGVYCSSRAMRIGVATPKKPSAH-EQYSSQAVILSGGYASNGAATHGSQSDGDS 361

Query: 364 TNTTIFIGGLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNG 423
           +NTTIF+GGLD  VTD++L+Q F+Q G++VSVKIP GKGCGF+QF++R +A+EA+QKL+G
Sbjct: 362 SNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSG 421

Query: 424 TVIGKQTVRLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYA--A 483
            +IGKQ VRLSWGRSP NKQ R D G+ W+G Y G Q YGGYGY      D   MYA  A
Sbjct: 422 AIIGKQAVRLSWGRSPANKQMRTDSGSQWNGGYNGRQNYGGYGYGASQNQD-SGMYATGA 428

Query: 484 AYGAYP-MYGTHQQQVN 487
           AYGA    YG HQQ V+
Sbjct: 482 AYGASSNRYGNHQQPVS 428

[Close]

BLAST of HG10004915 vs. ExPASy Swiss-Prot
Match: Q9SX79 (Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C PE=2 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 1.2e-128
Identity = 269/483 (55.69%), Postives = 314/483 (65.01%), Query Frame = 0


Query: 6   PDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPSSPHYIP 65
           P   P QQ A + E   +T   P P  W  M+YP   +I+ H MM    Y PP  P   P
Sbjct: 25  PPPPPPQQPAKEEENQPKTSPTP-PPHW--MRYP-PTVIIPHQMM----YAPPPFP---P 84

Query: 66  YRQYPPPHQLNGQQHQQPHQGS-TSENKTIWVGDLQHWMDENYLHSCFASTGEYECSLSI 125
           Y QYP  H L+ Q     HQ +   ENKTIWVGDL HWMDE YL+S FAS  E E     
Sbjct: 85  YHQYPNHHHLHHQSRGNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDERE----- 144

Query: 126 DLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRNYYMQISSLKVIRNK 185
                                                             I S+KVIRNK
Sbjct: 145 --------------------------------------------------IVSVKVIRNK 204

Query: 186 QTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSE-NGSDLS 245
             G+SEGYGFVEF SH+ A+KVL+ ++   MPNT+Q FRLNWA+FSTG+KR E NG DLS
Sbjct: 205 NNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLS 264

Query: 246 IFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTE 305
           IFVGDL+ DV+D++LHETF+ KY SVKAAKVV D NTG SKGYGFVRFGD+NER++AMTE
Sbjct: 265 IFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTE 324

Query: 306 MNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIGGLD 365
           MNG+ CSSR MRIG ATP+K++GYQQQ    GY  NG+ +   + +GD  NTTIF+GGLD
Sbjct: 325 MNGVKCSSRAMRIGPATPRKTNGYQQQ---GGYMPNGTLT---RPEGDIMNTTIFVGGLD 384

Query: 366 PNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTVRLS 425
            +VTD+DLKQ F++ G+IVSVKIPVGKGCGF+QF NR NAEEAL+KLNGTVIGKQTVRLS
Sbjct: 385 SSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLS 432

Query: 426 WGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMYGTHQQ 485
           WGR+P NKQ R  YGN W   YYGGQ Y GYGY +P P   P MY AA   YPMYG HQQ
Sbjct: 445 WGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMVPQP--DPRMYPAA-PYYPMYGGHQQ 432

Query: 486 QVN 487
           QV+
Sbjct: 505 QVS 432

[Close]

BLAST of HG10004915 vs. ExPASy Swiss-Prot
Match: Q9SX80 (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C' PE=2 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 6.0e-128
Identity = 266/483 (55.07%), Postives = 307/483 (63.56%), Query Frame = 0


Query: 6   PDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPSSPHYIP 65
           P   P        E   +T   P P  W  M+YP         +MP   Y PP    + P
Sbjct: 25  PPYPPPHPPVEVEENQPKTSPTPPPPHW--MRYPPV-------LMPQMMYAPPPPMPFSP 84

Query: 66  YRQYPPPHQLNGQQHQQPHQGS-TSENKTIWVGDLQHWMDENYLHSCFASTGEYECSLSI 125
           Y QYP  H  + Q     HQ +   ENKTIWVGDLQ+WMDE YL+S F S  E E     
Sbjct: 85  YHQYPNHHHFHHQSRGNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEERE----- 144

Query: 126 DLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRNYYMQISSLKVIRNK 185
                                                             I SLKVIRNK
Sbjct: 145 --------------------------------------------------IVSLKVIRNK 204

Query: 186 QTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSE-NGSDLS 245
             G SEGYGFVEF SH+ A+KVLQ ++   MPNT+Q FRLNWA+FSTG+KR E NG DLS
Sbjct: 205 HNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLS 264

Query: 246 IFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTE 305
           IFVGDLA DV+D++LHETF+ KY SVKAAKVV D NTG SKGYGFVRFGD+NER++AMTE
Sbjct: 265 IFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTE 324

Query: 306 MNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIGGLD 365
           MNG+ CSSR MRIG ATP+K++GYQQQ    GY  +G+F+   +S+GD  NTTIF+GGLD
Sbjct: 325 MNGVKCSSRAMRIGPATPRKTNGYQQQ---GGYMPSGAFT---RSEGDTINTTIFVGGLD 384

Query: 366 PNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTVRLS 425
            +VTD+DLKQ FS+ G+IVSVKIPVGKGCGF+QF NR NAEEAL+KLNGTVIGKQTVRLS
Sbjct: 385 SSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLS 434

Query: 426 WGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMYGTHQQ 485
           WGR+P NKQ R  YGN W   YYGGQ Y GYGY +P P   P MY AA   YPMYG HQQ
Sbjct: 445 WGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMVPQP--DPRMYPAA-PYYPMYGGHQQ 434

Query: 486 QVN 487
           QV+
Sbjct: 505 QVS 434

[Close]

BLAST of HG10004915 vs. ExPASy Swiss-Prot
Match: Q0WW84 (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B PE=1 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 6.7e-119
Identity = 256/480 (53.33%), Postives = 310/480 (64.58%), Query Frame = 0


Query: 3   SNGPDS--------QPQQQAAHQTEQNQQTHKQPQPQRWM-AMQY-PAAAMIM---QHPM 62
           +NG DS         P QQ     +Q QQ  +Q Q Q+WM AMQY PAAAM+M   Q  +
Sbjct: 4   TNGSDSTLATSGATPPNQQTPPPPQQWQQ--QQQQQQQWMAAMQYPPAAAMMMMQQQQML 63

Query: 63  MPPQHYVP----PSSPHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDE 122
           M P  YVP    P   H+    QY    Q   QQH+   +GS  + KT+WVGDL HWMDE
Sbjct: 64  MYPHQYVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLHWMDE 123

Query: 123 NYLHSCFASTGEYECSLSIDLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMS 182
            YLHSCF+ TGE                                                
Sbjct: 124 TYLHSCFSHTGE------------------------------------------------ 183

Query: 183 HALRNYYMQISSLKVIRNKQTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLN 242
                    +SS+KVIRNK T  SEGYGFVEF S   AE+VLQNYS  +MPN++Q FR+N
Sbjct: 184 ---------VSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRIN 243

Query: 243 WATFSTGDKRS-ENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSK 302
           WA+FSTG+KR+ ENG DLS+FVGDL+ DVTD +LHETF+ +Y SVK+AKVV D NTG SK
Sbjct: 244 WASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSK 303

Query: 303 GYGFVRFGDDNERSQAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQ------GYAS 362
           GYGFVRFGD+NERS+A+TEMNG YCS+R MR+G ATPK++   QQQ+SSQ      G+ S
Sbjct: 304 GYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGS 363

Query: 363 NGSFSHGHQSDGDFTNTTIFIGGLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFA 422
           NGS  +G QSDG+ TN TIF+GG+DP+V D+DL+Q FSQ G++VSVKIPVGKGCGF+QFA
Sbjct: 364 NGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFA 423

Query: 423 NRKNAEEALQKLNGTVIGKQTVRLSWGRSPTNKQYRADYGNHWSGAYYGGQMY-GGYGYA 458
           +RK+AE+A++ LNGTVIGK TVRLSWGRSP NKQ+R D G  W+G Y  G  Y  G GYA
Sbjct: 424 DRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWRGDSGQQWNGGYSRGHGYNNGGGYA 423

[Close]

BLAST of HG10004915 vs. ExPASy Swiss-Prot
Match: F4I3B3 (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A PE=2 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 3.2e-113
Identity = 252/488 (51.64%), Postives = 298/488 (61.07%), Query Frame = 0


Query: 3   SNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMA--MQYPAAAMIM----QHPMMPPQHYV 62
           S G    P  Q +    Q QQ  +  Q Q+WMA   QYPAAAM M    Q  M P   Y 
Sbjct: 18  SAGTTPPPPLQQSTPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYA 77

Query: 63  PPSSPHY-----IPYRQYPPPHQLNGQQHQQPHQGSTSEN-KTIWVGDLQHWMDENYLHS 122
           P +   Y       Y  Y    Q + Q  QQP  GS  ++ KT+WVGDL HWMDE YLH+
Sbjct: 78  PYNQAAYQQHPQFQYAAYQQQQQQHHQSQQQPRGGSGGDDVKTLWVGDLLHWMDETYLHT 137

Query: 123 CFASTGEYECSLSIDLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRN 182
           CF+ T E                                                     
Sbjct: 138 CFSHTNE----------------------------------------------------- 197

Query: 183 YYMQISSLKVIRNKQTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFS 242
               +SS+KVIRNKQT  SEGYGFVEF S + AE+ LQ++S + MPN EQ FRLNWA+FS
Sbjct: 198 ----VSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFS 257

Query: 243 TGDKR-SENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFV 302
           TG+KR SENG DLSIFVGDLA DV+D+VL ETFA +Y SVK AKVV D NTG SKGYGFV
Sbjct: 258 TGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFV 317

Query: 303 RFGDDNERSQAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYA-SNGSFSHGHQS 362
           RFGD+NERS+AMTEMNG +CSSR MR+G ATPK+++ Y QQ  SQ    + G   +G  S
Sbjct: 318 RFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMS 377

Query: 363 DGDFTNTTIFIGGLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQ 422
           DG+  N+TIF+GGLD +VT++DL Q FS  G++VSVKIPVGKGCGF+QFANR++AEEA+ 
Sbjct: 378 DGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIG 437

Query: 423 KLNGTVIGKQTVRLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMY 477
            LNGTVIGK TVRLSWGRSP NKQ+R+D GN W+G Y  GQ Y   GYA         MY
Sbjct: 438 NLNGTVIGKNTVRLSWGRSP-NKQWRSDSGNQWNGGYSRGQGYNN-GYA----NQDSNMY 442

[Close]

BLAST of HG10004915 vs. ExPASy TrEMBL
Match: A0A5A7V0L8 (Polyadenylate-binding protein RBP47-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00020 PE=4 SV=1)

HSP 1 Score: 839.7 bits (2168), Expect = 6.1e-240
Identity = 425/486 (87.45%), Postives = 427/486 (87.86%), Query Frame = 0


Query: 1   MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPSS 60
           MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPP S
Sbjct: 1   MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPPS 60

Query: 61  PHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGEYEC 120
           PHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGE   
Sbjct: 61  PHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGE--- 120

Query: 121 SLSIDLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRNYYMQISSLKV 180
                                                                 ISSLKV
Sbjct: 121 ------------------------------------------------------ISSLKV 180

Query: 181 IRNKQTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGS 240
           IRNKQTGISEGYGFVEFFSH TAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGS
Sbjct: 181 IRNKQTGISEGYGFVEFFSHTTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGS 240

Query: 241 DLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQA 300
           DLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQA
Sbjct: 241 DLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQA 300

Query: 301 MTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIG 360
           MTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIG
Sbjct: 301 MTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIG 360

Query: 361 GLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTV 420
           GLDPNVTD+DLKQLFSQHG+IVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTV
Sbjct: 361 GLDPNVTDEDLKQLFSQHGEIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTV 420

Query: 421 RLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMYGT 480
           RLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMYGT
Sbjct: 421 RLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMYGT 429

Query: 481 HQQQVN 487
           HQQQVN
Sbjct: 481 HQQQVN 429

[Close]

BLAST of HG10004915 vs. ExPASy TrEMBL
Match: A0A1S3BBK1 (polyadenylate-binding protein RBP47-like OS=Cucumis melo OX=3656 GN=LOC103487914 PE=4 SV=1)

HSP 1 Score: 839.7 bits (2168), Expect = 6.1e-240
Identity = 425/486 (87.45%), Postives = 427/486 (87.86%), Query Frame = 0


Query: 1   MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPSS 60
           MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPP S
Sbjct: 1   MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPPS 60

Query: 61  PHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGEYEC 120
           PHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGE   
Sbjct: 61  PHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGE--- 120

Query: 121 SLSIDLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRNYYMQISSLKV 180
                                                                 ISSLKV
Sbjct: 121 ------------------------------------------------------ISSLKV 180

Query: 181 IRNKQTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGS 240
           IRNKQTGISEGYGFVEFFSH TAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGS
Sbjct: 181 IRNKQTGISEGYGFVEFFSHTTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGS 240

Query: 241 DLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQA 300
           DLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQA
Sbjct: 241 DLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQA 300

Query: 301 MTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIG 360
           MTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIG
Sbjct: 301 MTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIG 360

Query: 361 GLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTV 420
           GLDPNVTD+DLKQLFSQHG+IVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTV
Sbjct: 361 GLDPNVTDEDLKQLFSQHGEIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTV 420

Query: 421 RLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMYGT 480
           RLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMYGT
Sbjct: 421 RLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMYGT 429

Query: 481 HQQQVN 487
           HQQQVN
Sbjct: 481 HQQQVN 429

[Close]

BLAST of HG10004915 vs. ExPASy TrEMBL
Match: A0A0A0LP64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360590 PE=4 SV=1)

HSP 1 Score: 836.6 bits (2160), Expect = 5.1e-239
Identity = 423/486 (87.04%), Postives = 426/486 (87.65%), Query Frame = 0


Query: 1   MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPSS 60
           MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPP S
Sbjct: 1   MPSNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPPS 60

Query: 61  PHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGEYEC 120
           PHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGE   
Sbjct: 61  PHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGE--- 120

Query: 121 SLSIDLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRNYYMQISSLKV 180
                                                                 ISSLKV
Sbjct: 121 ------------------------------------------------------ISSLKV 180

Query: 181 IRNKQTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGS 240
           IRNKQTGISEGYGFVEFFSH TAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGS
Sbjct: 181 IRNKQTGISEGYGFVEFFSHTTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGS 240

Query: 241 DLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQA 300
           DLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQA
Sbjct: 241 DLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQA 300

Query: 301 MTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIG 360
           MTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIG
Sbjct: 301 MTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIG 360

Query: 361 GLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTV 420
           GLDPNVTD+DLKQLFSQHG+IVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTV
Sbjct: 361 GLDPNVTDEDLKQLFSQHGEIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTV 420

Query: 421 RLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMYGT 480
           RLSWGRSPTNKQYR DYGNHWSGAYYGGQ+YGGYGYALPLPYDPPTMYAAAYGAYPMYGT
Sbjct: 421 RLSWGRSPTNKQYRGDYGNHWSGAYYGGQVYGGYGYALPLPYDPPTMYAAAYGAYPMYGT 429

Query: 481 HQQQVN 487
           HQQQVN
Sbjct: 481 HQQQVN 429

[Close]

BLAST of HG10004915 vs. ExPASy TrEMBL
Match: A0A6J1CRE8 (polyadenylate-binding protein RBP47-like OS=Momordica charantia OX=3673 GN=LOC111013897 PE=4 SV=1)

HSP 1 Score: 794.3 bits (2050), Expect = 2.9e-226
Identity = 405/491 (82.48%), Postives = 415/491 (84.52%), Query Frame = 0


Query: 1   MPSNGPDSQPQQQAAHQTEQNQQTHK----QPQPQRWMAMQYPAAAMIMQHPMMPPQHYV 60
           MPSNGPDSQPQQQ AHQTEQNQQ +K    QPQPQRWMAMQYPAAAMIMQHPMMPPQHYV
Sbjct: 1   MPSNGPDSQPQQQPAHQTEQNQQQNKQPQPQPQPQRWMAMQYPAAAMIMQHPMMPPQHYV 60

Query: 61  PPSSPHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTG 120
           PP SPHY+PYRQYPPPHQLNGQQHQ PHQGSTSENKTIWVGDL HWMDENYLHSCFASTG
Sbjct: 61  PPPSPHYMPYRQYPPPHQLNGQQHQPPHQGSTSENKTIWVGDLHHWMDENYLHSCFASTG 120

Query: 121 EYECSLSIDLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRNYYMQIS 180
           E                                                         IS
Sbjct: 121 E---------------------------------------------------------IS 180

Query: 181 SLKVIRNKQTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRS 240
           S+KVIRNKQTGISEGYGFVEFFSH TAEKVLQNYS+ILMPNTEQ FRLNWATFSTGDKRS
Sbjct: 181 SIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRS 240

Query: 241 ENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNE 300
           ENGSDLSIFVGDLAADVTDS+LHETFASKY SVKAAKVVYDPNTGCSKGYGFVRFGDDNE
Sbjct: 241 ENGSDLSIFVGDLAADVTDSLLHETFASKYPSVKAAKVVYDPNTGCSKGYGFVRFGDDNE 300

Query: 301 RSQAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTT 360
           RSQAM EMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSF+HGHQSDGD TNTT
Sbjct: 301 RSQAMAEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT 360

Query: 361 IFIGGLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIG 420
           IFIGGLDPNVTD+DL+QLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNG VIG
Sbjct: 361 IFIGGLDPNVTDEDLRQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGAVIG 420

Query: 421 KQTVRLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMY-AAAYGAY 480
           KQTVRLSWGRSP NKQYRADY NHW+G YYGGQ+YGGYGYALPLPYDPPTMY AAAYGAY
Sbjct: 421 KQTVRLSWGRSPANKQYRADYNNHWNGTYYGGQVYGGYGYALPLPYDPPTMYAAAAYGAY 434

Query: 481 PMYGTHQQQVN 487
           PMYGTHQQQVN
Sbjct: 481 PMYGTHQQQVN 434

[Close]

BLAST of HG10004915 vs. ExPASy TrEMBL
Match: A0A6J1GHF5 (polyadenylate-binding protein RBP47-like OS=Cucurbita moschata OX=3662 GN=LOC111454222 PE=4 SV=1)

HSP 1 Score: 730.7 bits (1885), Expect = 4.0e-207
Identity = 383/495 (77.37%), Postives = 400/495 (80.81%), Query Frame = 0


Query: 1   MPSNGPDSQPQQQAAHQTEQNQQTHKQPQ------PQRWMAMQYPAAAMIMQHPMMPPQH 60
           MPSNGPDSQ QQQ+AH TEQNQQ HKQPQ      PQ WMAMQY AA MIM  PMMPPQH
Sbjct: 1   MPSNGPDSQSQQQSAHHTEQNQQPHKQPQPHPQPPPQWWMAMQYQAAPMIMHDPMMPPQH 60

Query: 61  YVPPSSPHYIPYRQYPPPHQLNGQQHQQ-PHQGSTSENKTIWVGDLQHWMDENYLHSCFA 120
           Y+P SSPH IPY +  PPHQ+NGQQHQQ PHQ STSENKTIWVGDLQHWMDENYLHSCFA
Sbjct: 61  YMPLSSPHRIPYGR--PPHQVNGQQHQQPPHQESTSENKTIWVGDLQHWMDENYLHSCFA 120

Query: 121 STGEYECSLSIDLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRNYYM 180
           STGE                                                        
Sbjct: 121 STGE-------------------------------------------------------- 180

Query: 181 QISSLKVIRNKQTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFSTGD 240
            +SS+KVIRNKQTGISEGYGFVEF SH TAEKVL NYS++LMPNTE  FRLNWAT STGD
Sbjct: 181 -VSSIKVIRNKQTGISEGYGFVEFLSHTTAEKVLHNYSTVLMPNTELTFRLNWATSSTGD 240

Query: 241 KRSENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 300
           KRSE GSDLSIFVGDLAADVTDS+L ETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD
Sbjct: 241 KRSEKGSDLSIFVGDLAADVTDSILQETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 300

Query: 301 DNERSQAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFT 360
           DNERSQAMT+MNG+YCSSRPMRIGAATPKKSSGYQ QYSSQGY SNGSF+HGHQSDGD T
Sbjct: 301 DNERSQAMTDMNGVYCSSRPMRIGAATPKKSSGYQHQYSSQGYGSNGSFTHGHQSDGDST 360

Query: 361 NTTIFIGGLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGT 420
           NTTIFIGGLDPNVTDDDL+QLFSQHGDIVSVKIP+GKGCGFIQFANRKNAEEALQKLNGT
Sbjct: 361 NTTIFIGGLDPNVTDDDLRQLFSQHGDIVSVKIPIGKGCGFIQFANRKNAEEALQKLNGT 420

Query: 421 VIGKQTVRLSWGRSPTNKQYRADYGNHWSG-AYYGGQMYGGYGYALPLPYDPPTMYAAA- 480
            IGKQTVRLSWGRSP NKQ+RADY N WSG AYYGGQMYGGYGYA+PLPYDPPTMYAAA 
Sbjct: 421 EIGKQTVRLSWGRSPANKQHRADYSNQWSGAAYYGGQMYGGYGYAMPLPYDPPTMYAAAS 436

Query: 481 YGAYPMYGTHQQQVN 487
           YGAYPMYGTHQQQV+
Sbjct: 481 YGAYPMYGTHQQQVS 436

[Close]

BLAST of HG10004915 vs. TAIR 10
Match: AT1G47490.1 (RNA-binding protein 47C )

HSP 1 Score: 461.5 bits (1186), Expect = 8.6e-130
Identity = 269/483 (55.69%), Postives = 314/483 (65.01%), Query Frame = 0


Query: 6   PDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPSSPHYIP 65
           P   P QQ A + E   +T   P P  W  M+YP   +I+ H MM    Y PP  P   P
Sbjct: 25  PPPPPPQQPAKEEENQPKTSPTP-PPHW--MRYP-PTVIIPHQMM----YAPPPFP---P 84

Query: 66  YRQYPPPHQLNGQQHQQPHQGS-TSENKTIWVGDLQHWMDENYLHSCFASTGEYECSLSI 125
           Y QYP  H L+ Q     HQ +   ENKTIWVGDL HWMDE YL+S FAS  E E     
Sbjct: 85  YHQYPNHHHLHHQSRGNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDERE----- 144

Query: 126 DLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRNYYMQISSLKVIRNK 185
                                                             I S+KVIRNK
Sbjct: 145 --------------------------------------------------IVSVKVIRNK 204

Query: 186 QTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSE-NGSDLS 245
             G+SEGYGFVEF SH+ A+KVL+ ++   MPNT+Q FRLNWA+FSTG+KR E NG DLS
Sbjct: 205 NNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLS 264

Query: 246 IFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTE 305
           IFVGDL+ DV+D++LHETF+ KY SVKAAKVV D NTG SKGYGFVRFGD+NER++AMTE
Sbjct: 265 IFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTE 324

Query: 306 MNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIGGLD 365
           MNG+ CSSR MRIG ATP+K++GYQQQ    GY  NG+ +   + +GD  NTTIF+GGLD
Sbjct: 325 MNGVKCSSRAMRIGPATPRKTNGYQQQ---GGYMPNGTLT---RPEGDIMNTTIFVGGLD 384

Query: 366 PNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTVRLS 425
            +VTD+DLKQ F++ G+IVSVKIPVGKGCGF+QF NR NAEEAL+KLNGTVIGKQTVRLS
Sbjct: 385 SSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLS 432

Query: 426 WGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMYGTHQQ 485
           WGR+P NKQ R  YGN W   YYGGQ Y GYGY +P P   P MY AA   YPMYG HQQ
Sbjct: 445 WGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMVPQP--DPRMYPAA-PYYPMYGGHQQ 432

Query: 486 QVN 487
           QV+
Sbjct: 505 QVS 432

[Close]

BLAST of HG10004915 vs. TAIR 10
Match: AT1G47500.1 (RNA-binding protein 47C' )

HSP 1 Score: 459.1 bits (1180), Expect = 4.3e-129
Identity = 266/483 (55.07%), Postives = 307/483 (63.56%), Query Frame = 0


Query: 6   PDSQPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQHPMMPPQHYVPPSSPHYIP 65
           P   P        E   +T   P P  W  M+YP         +MP   Y PP    + P
Sbjct: 25  PPYPPPHPPVEVEENQPKTSPTPPPPHW--MRYPPV-------LMPQMMYAPPPPMPFSP 84

Query: 66  YRQYPPPHQLNGQQHQQPHQGS-TSENKTIWVGDLQHWMDENYLHSCFASTGEYECSLSI 125
           Y QYP  H  + Q     HQ +   ENKTIWVGDLQ+WMDE YL+S F S  E E     
Sbjct: 85  YHQYPNHHHFHHQSRGNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEERE----- 144

Query: 126 DLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRNYYMQISSLKVIRNK 185
                                                             I SLKVIRNK
Sbjct: 145 --------------------------------------------------IVSLKVIRNK 204

Query: 186 QTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSE-NGSDLS 245
             G SEGYGFVEF SH+ A+KVLQ ++   MPNT+Q FRLNWA+FSTG+KR E NG DLS
Sbjct: 205 HNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLS 264

Query: 246 IFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTE 305
           IFVGDLA DV+D++LHETF+ KY SVKAAKVV D NTG SKGYGFVRFGD+NER++AMTE
Sbjct: 265 IFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTE 324

Query: 306 MNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIGGLD 365
           MNG+ CSSR MRIG ATP+K++GYQQQ    GY  +G+F+   +S+GD  NTTIF+GGLD
Sbjct: 325 MNGVKCSSRAMRIGPATPRKTNGYQQQ---GGYMPSGAFT---RSEGDTINTTIFVGGLD 384

Query: 366 PNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTVRLS 425
            +VTD+DLKQ FS+ G+IVSVKIPVGKGCGF+QF NR NAEEAL+KLNGTVIGKQTVRLS
Sbjct: 385 SSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLS 434

Query: 426 WGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYAAAYGAYPMYGTHQQ 485
           WGR+P NKQ R  YGN W   YYGGQ Y GYGY +P P   P MY AA   YPMYG HQQ
Sbjct: 445 WGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMVPQP--DPRMYPAA-PYYPMYGGHQQ 434

Query: 486 QVN 487
           QV+
Sbjct: 505 QVS 434

[Close]

BLAST of HG10004915 vs. TAIR 10
Match: AT3G19130.1 (RNA-binding protein 47B )

HSP 1 Score: 429.1 bits (1102), Expect = 4.7e-120
Identity = 256/480 (53.33%), Postives = 310/480 (64.58%), Query Frame = 0


Query: 3   SNGPDS--------QPQQQAAHQTEQNQQTHKQPQPQRWM-AMQY-PAAAMIM---QHPM 62
           +NG DS         P QQ     +Q QQ  +Q Q Q+WM AMQY PAAAM+M   Q  +
Sbjct: 4   TNGSDSTLATSGATPPNQQTPPPPQQWQQ--QQQQQQQWMAAMQYPPAAAMMMMQQQQML 63

Query: 63  MPPQHYVP----PSSPHYIPYRQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDE 122
           M P  YVP    P   H+    QY    Q   QQH+   +GS  + KT+WVGDL HWMDE
Sbjct: 64  MYPHQYVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLHWMDE 123

Query: 123 NYLHSCFASTGEYECSLSIDLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMS 182
            YLHSCF+ TGE                                                
Sbjct: 124 TYLHSCFSHTGE------------------------------------------------ 183

Query: 183 HALRNYYMQISSLKVIRNKQTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLN 242
                    +SS+KVIRNK T  SEGYGFVEF S   AE+VLQNYS  +MPN++Q FR+N
Sbjct: 184 ---------VSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRIN 243

Query: 243 WATFSTGDKRS-ENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSK 302
           WA+FSTG+KR+ ENG DLS+FVGDL+ DVTD +LHETF+ +Y SVK+AKVV D NTG SK
Sbjct: 244 WASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSK 303

Query: 303 GYGFVRFGDDNERSQAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQ------GYAS 362
           GYGFVRFGD+NERS+A+TEMNG YCS+R MR+G ATPK++   QQQ+SSQ      G+ S
Sbjct: 304 GYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGS 363

Query: 363 NGSFSHGHQSDGDFTNTTIFIGGLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFA 422
           NGS  +G QSDG+ TN TIF+GG+DP+V D+DL+Q FSQ G++VSVKIPVGKGCGF+QFA
Sbjct: 364 NGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFA 423

Query: 423 NRKNAEEALQKLNGTVIGKQTVRLSWGRSPTNKQYRADYGNHWSGAYYGGQMY-GGYGYA 458
           +RK+AE+A++ LNGTVIGK TVRLSWGRSP NKQ+R D G  W+G Y  G  Y  G GYA
Sbjct: 424 DRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWRGDSGQQWNGGYSRGHGYNNGGGYA 423

[Close]

BLAST of HG10004915 vs. TAIR 10
Match: AT1G49600.1 (RNA-binding protein 47A )

HSP 1 Score: 410.2 bits (1053), Expect = 2.3e-114
Identity = 252/488 (51.64%), Postives = 298/488 (61.07%), Query Frame = 0


Query: 3   SNGPDSQPQQQAAHQTEQNQQTHKQPQPQRWMA--MQYPAAAMIM----QHPMMPPQHYV 62
           S G    P  Q +    Q QQ  +  Q Q+WMA   QYPAAAM M    Q  M P   Y 
Sbjct: 18  SAGTTPPPPLQQSTPPPQQQQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYA 77

Query: 63  PPSSPHY-----IPYRQYPPPHQLNGQQHQQPHQGSTSEN-KTIWVGDLQHWMDENYLHS 122
           P +   Y       Y  Y    Q + Q  QQP  GS  ++ KT+WVGDL HWMDE YLH+
Sbjct: 78  PYNQAAYQQHPQFQYAAYQQQQQQHHQSQQQPRGGSGGDDVKTLWVGDLLHWMDETYLHT 137

Query: 123 CFASTGEYECSLSIDLFRFLEKNLSKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRN 182
           CF+ T E                                                     
Sbjct: 138 CFSHTNE----------------------------------------------------- 197

Query: 183 YYMQISSLKVIRNKQTGISEGYGFVEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFS 242
               +SS+KVIRNKQT  SEGYGFVEF S + AE+ LQ++S + MPN EQ FRLNWA+FS
Sbjct: 198 ----VSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFS 257

Query: 243 TGDKR-SENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFV 302
           TG+KR SENG DLSIFVGDLA DV+D+VL ETFA +Y SVK AKVV D NTG SKGYGFV
Sbjct: 258 TGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFV 317

Query: 303 RFGDDNERSQAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYA-SNGSFSHGHQS 362
           RFGD+NERS+AMTEMNG +CSSR MR+G ATPK+++ Y QQ  SQ    + G   +G  S
Sbjct: 318 RFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMS 377

Query: 363 DGDFTNTTIFIGGLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQ 422
           DG+  N+TIF+GGLD +VT++DL Q FS  G++VSVKIPVGKGCGF+QFANR++AEEA+ 
Sbjct: 378 DGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIG 437

Query: 423 KLNGTVIGKQTVRLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMY 477
            LNGTVIGK TVRLSWGRSP NKQ+R+D GN W+G Y  GQ Y   GYA         MY
Sbjct: 438 NLNGTVIGKNTVRLSWGRSP-NKQWRSDSGNQWNGGYSRGQGYNN-GYA----NQDSNMY 442

[Close]

BLAST of HG10004915 vs. TAIR 10
Match: AT5G54900.1 (RNA-binding protein 45A )

HSP 1 Score: 332.8 bits (852), Expect = 4.6e-91
Identity = 197/413 (47.70%), Postives = 238/413 (57.63%), Query Frame = 0


Query: 79  QHQ----QPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGEYECSLSIDLFRFLEKNL 138
           QHQ      + GS S+ K++W+GDLQ WMDENY+ S FA +GE                 
Sbjct: 43  QHQYGIGSQNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGE----------------- 102

Query: 139 SKESSKRTCCWLLVFFLTVFLVFSLSTFLMSHALRNYYMQISSLKVIRNKQTGISEGYGF 198
                                                    +S KVIRNK TG SEGYGF
Sbjct: 103 ----------------------------------------ATSAKVIRNKLTGQSEGYGF 162

Query: 199 VEFFSHNTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSE-NGSDLSIFVGDLAADV 258
           +EF SH+ AE+VLQ Y+   MP+TEQ FRLNWA    G+KR +  G D +IFVGDLA +V
Sbjct: 163 IEFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEV 222

Query: 259 TDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGIYCSSRP 318
           TD +L +TF + Y SVK AKVV D  TG SKGYGFVRF D+NE+ +AMTEMNG YCS+RP
Sbjct: 223 TDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRP 282

Query: 319 MRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIGGLDPNVTDDDLKQ 378
           MRIG A  K +   Q         +N         D D  NTTIF+GGLD NVTDD+LK 
Sbjct: 283 MRIGPAANKNALPMQPAMYQNTQGANA-------GDNDPNNTTIFVGGLDANVTDDELKS 342

Query: 379 LFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTVRLSWGRSPTNKQY 438
           +F Q G+++ VKIP GK CGF+Q+AN+ +AE AL  LNGT +G Q++RLSWGRSP NKQ 
Sbjct: 343 IFGQFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSP-NKQ- 385

Query: 439 RADYGNHWSGAYYG--GQMYGGYGYALPLPYDPPTMYAAAYGAYPMYGTHQQQ 485
            +D      G YYG   Q  GGYGYA   P   P  Y   YG Y  YG +QQQ
Sbjct: 403 -SDQAQWNGGGYYGYPPQPQGGYGYAAQPPTQDPNAY---YGGYTGYGNYQQQ 385

The following BLAST results are available for this feature:

BLAST of HG10004915 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444645.1	1.3e-239	87.45	PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis melo] >KAA0060870.1...	[more]
XP_004152729.1	1.1e-238	87.04	polyadenylate-binding protein RBP47 [Cucumis sativus] >KGN62542.1 hypothetical p...	[more]
XP_038885237.1	9.9e-237	86.68	polyadenylate-binding protein RBP47-like [Benincasa hispida]	[more]
XP_022144139.1	6.0e-226	82.48	polyadenylate-binding protein RBP47-like [Momordica charantia]	[more]
XP_022951380.1	8.2e-207	77.37	polyadenylate-binding protein RBP47-like [Cucurbita moschata] >XP_022951381.1 po...	[more]

BLAST of HG10004915 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LEB3	5.3e-132	54.73	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q9SX79	1.2e-128	55.69	Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C P...	[more]
Q9SX80	6.0e-128	55.07	Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C'...	[more]
Q0WW84	6.7e-119	53.33	Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B P...	[more]
F4I3B3	3.2e-113	51.64	Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A P...	[more]

BLAST of HG10004915 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V0L8	6.1e-240	87.45	Polyadenylate-binding protein RBP47-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BBK1	6.1e-240	87.45	polyadenylate-binding protein RBP47-like OS=Cucumis melo OX=3656 GN=LOC103487914...	[more]
A0A0A0LP64	5.1e-239	87.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360590 PE=4 SV=1	[more]
A0A6J1CRE8	2.9e-226	82.48	polyadenylate-binding protein RBP47-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1GHF5	4.0e-207	77.37	polyadenylate-binding protein RBP47-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of HG10004915 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47490.1	8.6e-130	55.69	RNA-binding protein 47C	[more]
AT1G47500.1	4.3e-129	55.07	RNA-binding protein 47C'	[more]
AT3G19130.1	4.7e-120	53.33	RNA-binding protein 47B	[more]
AT1G49600.1	2.3e-114	51.64	RNA-binding protein 47A	[more]
AT5G54900.1	4.6e-91	47.70	RNA-binding protein 45A	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 356..423 e-value: 3.2E-24 score: 96.5 coord: 243..317 e-value: 7.2E-16 score: 68.7 coord: 93..225 e-value: 1.4 score: 5.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 244..314 e-value: 5.0E-13 score: 48.7 coord: 174..218 e-value: 1.9E-6 score: 27.6 coord: 357..420 e-value: 4.8E-20 score: 71.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 242..321 score: 16.568354
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 355..427 score: 18.54678
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 152..229 score: 10.343133
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 74..227 e-value: 1.9E-12 score: 49.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 228..337 e-value: 5.1E-20 score: 73.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 343..457 e-value: 4.6E-26 score: 93.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..90
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 25..119
None	No IPR available	PANTHER	PTHR47640:SF16	POLYADENYLATE-BINDING PROTEIN RBP47C-RELATED	coord: 173..485
None	No IPR available	PANTHER	PTHR47640:SF16	POLYADENYLATE-BINDING PROTEIN RBP47C-RELATED	coord: 25..119
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 173..485
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 93..230 e-value: 9.03789E-34 score: 120.445
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 241..320 e-value: 7.99147E-45 score: 149.737
None	No IPR available	CDD	cd12346	RRM3_NGR1_NAM8_like	coord: 354..425 e-value: 6.9284E-40 score: 136.279
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 174..228
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 80..118
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 242..428

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004915.1	HG10004915.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding