HG10004765 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004765
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	DNA ligase 1-like isoform X2
Location	Chr08: 20217600 .. 20219508 (+)
RNA-Seq Expression	HG10004765
Synteny	HG10004765

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCGTTGCTTTCCTTACCCACCTCCTGGTTACGTGAGGAAGGTGGCTAGCACCGAGGCGGCCTTGATCGAATCGATTAAGGTTTGTTTCAGCTATTTGGTTGGTTTTCATAATGTATGCTGGATTCAATTATGTTCTGATTCCAATTGATTGCGAGATCTCTTGGGATTGTAACTTTTTGGATGGGGTATATCTGTAATCAGGAACGGCTTTTCTTGTAATTTTTTCGACGACGGGGGAGACAATGGATGTGGGTTTTCTTGTTTCGTTTGGTTTCGAGAGTTGCAAGTTTTGTACCCTAATTATAGGAATATTGATTTTGGATTTTTTGGACTGTAGTTTCTAGGTTTAGTTTGGTTCTTCTGTGTAATATATCTCTTGAAGGAACGAGAGATCTTCGAGAGTTTTGAGTGTGTAGATAGTGGGTTAGGGTTCTGCTAGTTGCATGTTGTACTCTTCGTTCTTGGATCTTGTATGGATATGTACCGCCTTTGAAATCAAAACATCAGAACACTTTAATAAACGTTTTAAACTTTTAATTTTTCATAGATCATTTAATCATCGTGTAAACTTCATGGTTTTTTAAATGCTTTTAAAACCCAGTTCCTTTTCTTTCAAATGGATTGTTTTCTACAAGTTTTAAATGCAAGAGATTTAGGGTTTTCCGCAAGTTGATTATTATAAACGCTTTTAGATGAAATTTTTGTAGAACCACTTTTCCCTTGATATCTTTAGGCATATTAATACATGATATGAATGTATGAGTTTGCTAGTTTGCTAGTTACATCAGATGGAAATTCTCCTTTACAATAGGAAAGCTACCCTTTTTTAAGGGCTGCATTATATTAGTTAGGGAATGGTTGATCTGTTTGGTGCTTGTGTCGTCTGCTCTTTTTGAACTGGTTATTCTGGTGCGTTATAGCTCCAATCTGAAAGACGACAGAGCAAGAATGATAGAAAGAAAGAGAAAAGTAAGGACAAGAAAGAGAAGAGCAAGGACAAGAAAGAGAGAAGTAAGGACAAGAAACACAAAAGCAAAGAACGTAAAGAAAAATCCTCCCACAGCCATGACTTGAAAGATCGGAAACAAAAGGAATGCTTAAACGAAGCCAAGGACCTTCAAAAGGGTACCAAAGTTGAAGCAGAACAATTAGAAAGGAGTGCTCTCACTGAAGAGCATGGACAACCTCATAGCCCTGCCTACTTGTCTGACGGAACTCAGATCAGCCACAAGAGAAAAAGGGATGCTGCATTACAGCCTAATGAAGGTTGTAAGCCTGGTGGGTTTATATTTGTAGATAATAGGCTCTTTTATAAGTTATATTGGCCACTTGAACAAACGCTAATATATTATTGATCATAAACAGGCAAAATCATCCGGATCAAACTGGGTTCTTCACTAAGCCAGCAAGAGGATTCATCGGCTGGCAGCGAACAGACGTGTTCTACGTCTGGTCGTGATAATTCTGTTGATCAAAAGAGAGATGAGAACAGCCATGGATCTATTCAGCAAAATACTTTCTTCACCAATGCTGAAACAGCTGTTGCTGTCAAGGATCCCACTTCGTCCAAACCAATGATCAAAGACCCTCCTTTGCATCCTGTGAAGGACATTAGTTCTAAGGGTAATGCTGTGTCGTTACCCCGTCGCACCAGAAGTCCTGCTGAATCTGCTTATGAGGCCTTGTTTGAGAAGTGGGTAGCACCACCTCTTCAATTGGAGCAACAAACAGATGATGAAGAATGGCTCTTTGGAAGAACAAGAAAACAAGATGGACAAAGTACCATGACCAACAAAGCTTTCAGTTCTGTTCCGAGCTGTGGTAGAAGTTCAAGTTTGTGGCCGAGAGGACAACATCTTGCAGATGCTGATGTTTATTCATTACCTTATACGATCCCATTTTGA

mRNA sequence

ATGTCTCGTTGCTTTCCTTACCCACCTCCTGGTTACGTGAGGAAGGTGGCTAGCACCGAGGCGGCCTTGATCGAATCGATTAAGCTCCAATCTGAAAGACGACAGAGCAAGAATGATAGAAAGAAAGAGAAAAGTAAGGACAAGAAAGAGAAGAGCAAGGACAAGAAAGAGAGAAGTAAGGACAAGAAACACAAAAGCAAAGAACGTAAAGAAAAATCCTCCCACAGCCATGACTTGAAAGATCGGAAACAAAAGGAATGCTTAAACGAAGCCAAGGACCTTCAAAAGGGTACCAAAGTTGAAGCAGAACAATTAGAAAGGAGTGCTCTCACTGAAGAGCATGGACAACCTCATAGCCCTGCCTACTTGTCTGACGGAACTCAGATCAGCCACAAGAGAAAAAGGGATGCTGCATTACAGCCTAATGAAGGTTGTAAGCCTGGCAAAATCATCCGGATCAAACTGGGTTCTTCACTAAGCCAGCAAGAGGATTCATCGGCTGGCAGCGAACAGACGTGTTCTACGTCTGGTCGTGATAATTCTGTTGATCAAAAGAGAGATGAGAACAGCCATGGATCTATTCAGCAAAATACTTTCTTCACCAATGCTGAAACAGCTGTTGCTGTCAAGGATCCCACTTCGTCCAAACCAATGATCAAAGACCCTCCTTTGCATCCTGTGAAGGACATTAGTTCTAAGGGTAATGCTGTGTCGTTACCCCGTCGCACCAGAAGTCCTGCTGAATCTGCTTATGAGGCCTTGTTTGAGAAGTGGGTAGCACCACCTCTTCAATTGGAGCAACAAACAGATGATGAAGAATGGCTCTTTGGAAGAACAAGAAAACAAGATGGACAAAGTACCATGACCAACAAAGCTTTCAGTTCTGTTCCGAGCTGTGGTAGAAGTTCAAGTTTGTGGCCGAGAGGACAACATCTTGCAGATGCTGATGTTTATTCATTACCTTATACGATCCCATTTTGA

Coding sequence (CDS)

ATGTCTCGTTGCTTTCCTTACCCACCTCCTGGTTACGTGAGGAAGGTGGCTAGCACCGAGGCGGCCTTGATCGAATCGATTAAGCTCCAATCTGAAAGACGACAGAGCAAGAATGATAGAAAGAAAGAGAAAAGTAAGGACAAGAAAGAGAAGAGCAAGGACAAGAAAGAGAGAAGTAAGGACAAGAAACACAAAAGCAAAGAACGTAAAGAAAAATCCTCCCACAGCCATGACTTGAAAGATCGGAAACAAAAGGAATGCTTAAACGAAGCCAAGGACCTTCAAAAGGGTACCAAAGTTGAAGCAGAACAATTAGAAAGGAGTGCTCTCACTGAAGAGCATGGACAACCTCATAGCCCTGCCTACTTGTCTGACGGAACTCAGATCAGCCACAAGAGAAAAAGGGATGCTGCATTACAGCCTAATGAAGGTTGTAAGCCTGGCAAAATCATCCGGATCAAACTGGGTTCTTCACTAAGCCAGCAAGAGGATTCATCGGCTGGCAGCGAACAGACGTGTTCTACGTCTGGTCGTGATAATTCTGTTGATCAAAAGAGAGATGAGAACAGCCATGGATCTATTCAGCAAAATACTTTCTTCACCAATGCTGAAACAGCTGTTGCTGTCAAGGATCCCACTTCGTCCAAACCAATGATCAAAGACCCTCCTTTGCATCCTGTGAAGGACATTAGTTCTAAGGGTAATGCTGTGTCGTTACCCCGTCGCACCAGAAGTCCTGCTGAATCTGCTTATGAGGCCTTGTTTGAGAAGTGGGTAGCACCACCTCTTCAATTGGAGCAACAAACAGATGATGAAGAATGGCTCTTTGGAAGAACAAGAAAACAAGATGGACAAAGTACCATGACCAACAAAGCTTTCAGTTCTGTTCCGAGCTGTGGTAGAAGTTCAAGTTTGTGGCCGAGAGGACAACATCTTGCAGATGCTGATGTTTATTCATTACCTTATACGATCCCATTTTGA

Protein sequence

MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKNDRKKEKSKDKKEKSKDKKERSKDKKHKSKERKEKSSHSHDLKDRKQKECLNEAKDLQKGTKVEAEQLERSALTEEHGQPHSPAYLSDGTQISHKRKRDAALQPNEGCKPGKIIRIKLGSSLSQQEDSSAGSEQTCSTSGRDNSVDQKRDENSHGSIQQNTFFTNAETAVAVKDPTSSKPMIKDPPLHPVKDISSKGNAVSLPRRTRSPAESAYEALFEKWVAPPLQLEQQTDDEEWLFGRTRKQDGQSTMTNKAFSSVPSCGRSSSLWPRGQHLADADVYSLPYTIPF

Homology

[Close]

BLAST of HG10004765 vs. NCBI nr
Match: XP_038885448.1 (DNA ligase 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 509.2 bits (1310), Expect = 2.6e-140
Identity = 289/329 (87.84%), Postives = 297/329 (90.27%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKNDRKKEKSKDKKEKSKDKKERSK 60
           MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKND KKEKSK KKEKSKDKKERSK
Sbjct: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKNDSKKEKSKHKKEKSKDKKERSK 60

Query: 61  DKKHKSKERKEKSSHSHDLKDRKQKECLNEAKDLQKGTKVEAEQLERSALTEEHGQ---P 120
           DKKHKSKERKEKSSHS DL D+KQKECL EAK+L KGTKVEAEQLERS LTEEHGQ   P
Sbjct: 61  DKKHKSKERKEKSSHSRDLNDQKQKECLKEAKELLKGTKVEAEQLERSGLTEEHGQPVWP 120

Query: 121 HSPAYLSDGTQISHKRKRDAALQPNEGCKPGKIIRIKLGSSLSQQEDSSAGSEQTCSTSG 180
            SP YLSDGTQI+HKRKRDA+LQ NEGCKPGKIIRIKL  SLSQQEDSSAGSEQTCSTSG
Sbjct: 121 QSPGYLSDGTQINHKRKRDASLQSNEGCKPGKIIRIKL--SLSQQEDSSAGSEQTCSTSG 180

Query: 181 RDNSVDQKRDENSHGSIQQNTFFTNAETAVAVKDPTSSKPMIKDPPLHPVKDISSKGNAV 240
           RD SVDQKRDENS GSIQQNT FT A TAVAV DP+SSKP I+      VKDISSKGN V
Sbjct: 181 RDISVDQKRDENSRGSIQQNTGFTYAGTAVAVNDPSSSKPKIQS-----VKDISSKGNVV 240

Query: 241 SLPRRTRSPAESAYEALFEKWVAPPLQLEQQTDDEEWLFGRTRKQDGQSTMTNKAFSSVP 300
           SLP RTRSPAESAYEALFEKWVAPPLQLEQQTDDE+WLFGRTRKQDGQST  NKAFSSVP
Sbjct: 241 SLPPRTRSPAESAYEALFEKWVAPPLQLEQQTDDEDWLFGRTRKQDGQST-NNKAFSSVP 300

Query: 301 SCGRSSSLWPRGQHLADADVYSLPYTIPF 327
           SCGRSSSLWPRGQ+LADADVYSLPYTIPF
Sbjct: 301 SCGRSSSLWPRGQYLADADVYSLPYTIPF 321

[Close]

BLAST of HG10004765 vs. NCBI nr
Match: XP_038885449.1 (nucleoporin GLE1 isoform X2 [Benincasa hispida])

HSP 1 Score: 493.0 bits (1268), Expect = 1.9e-135
Identity = 285/329 (86.63%), Postives = 293/329 (89.06%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKNDRKKEKSKDKKEKSKDKKERSK 60
           MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKND KKEKSK KKEKSKDKKERSK
Sbjct: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKNDSKKEKSKHKKEKSKDKKERSK 60

Query: 61  DKKHKSKERKEKSSHSHDLKDRKQKECLNEAKDLQKGTKVEAEQLERSALTEEHGQ---P 120
           DKKHKSKERKEKSSHS DL D+KQKECL EAK+L KGTKVEAEQLERS LTEEHGQ   P
Sbjct: 61  DKKHKSKERKEKSSHSRDLNDQKQKECLKEAKELLKGTKVEAEQLERSGLTEEHGQPVWP 120

Query: 121 HSPAYLSDGTQISHKRKRDAALQPNEGCKPGKIIRIKLGSSLSQQEDSSAGSEQTCSTSG 180
            SP YLSDGTQI+HKRKRDA+LQ NE    GKIIRIKL  SLSQQEDSSAGSEQTCSTSG
Sbjct: 121 QSPGYLSDGTQINHKRKRDASLQSNE----GKIIRIKL--SLSQQEDSSAGSEQTCSTSG 180

Query: 181 RDNSVDQKRDENSHGSIQQNTFFTNAETAVAVKDPTSSKPMIKDPPLHPVKDISSKGNAV 240
           RD SVDQKRDENS GSIQQNT FT A TAVAV DP+SSKP I+      VKDISSKGN V
Sbjct: 181 RDISVDQKRDENSRGSIQQNTGFTYAGTAVAVNDPSSSKPKIQS-----VKDISSKGNVV 240

Query: 241 SLPRRTRSPAESAYEALFEKWVAPPLQLEQQTDDEEWLFGRTRKQDGQSTMTNKAFSSVP 300
           SLP RTRSPAESAYEALFEKWVAPPLQLEQQTDDE+WLFGRTRKQDGQST  NKAFSSVP
Sbjct: 241 SLPPRTRSPAESAYEALFEKWVAPPLQLEQQTDDEDWLFGRTRKQDGQST-NNKAFSSVP 300

Query: 301 SCGRSSSLWPRGQHLADADVYSLPYTIPF 327
           SCGRSSSLWPRGQ+LADADVYSLPYTIPF
Sbjct: 301 SCGRSSSLWPRGQYLADADVYSLPYTIPF 317

[Close]

BLAST of HG10004765 vs. NCBI nr
Match: XP_008445332.1 (PREDICTED: uncharacterized protein LOC103488397 [Cucumis melo] >KAA0064838.1 DNA ligase 1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 438.0 bits (1125), Expect = 7.4e-119
Identity = 258/336 (76.79%), Postives = 274/336 (81.55%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKNDRKKEKSKDKKEKSKDKKERSK 60
           MSRCFPYPPPGYVRKVASTEAALIESIKLQSE RQSKNDRK EK + KKEKSKDKKERSK
Sbjct: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSE-RQSKNDRKNEKRRHKKEKSKDKKERSK 60

Query: 61  DKKHKSKER---KEKSSHSHDLKDRKQKECLNEAKDLQKGTKVEAEQLERSALTEEHGQ- 120
           DKKHKSKER   KEKSSHS  L D+K  +CL E KDL  GTKVEAEQLERS LTEEHGQ 
Sbjct: 61  DKKHKSKERKEHKEKSSHSRSLNDQKHNKCLKEVKDLLDGTKVEAEQLERSGLTEEHGQP 120

Query: 121 --PHSPAYLSDGTQISHKRKRDAALQPNEGCKPGKIIRIKLGS--SLSQQEDSSAGSEQT 180
             P SPAYLSDGTQI HKRKR A  QP+EGCKPGKIIRIKL S  SLSQQEDS+AGSEQ 
Sbjct: 121 VWPQSPAYLSDGTQIDHKRKRQAETQPDEGCKPGKIIRIKLASAPSLSQQEDSAAGSEQM 180

Query: 181 CSTSGRDNSVDQKRDENSHGSIQQNTFFTNAETAVAVKDPTSSKPMIKDPPLHPVKDISS 240
           CSTSGR NS DQK D +SHGS+       NAETAVAV  PT S P I+ PPLHP+ D +S
Sbjct: 181 CSTSGRYNSFDQKTDGDSHGSV------ANAETAVAV-HPTLSNPKIEHPPLHPIGDRNS 240

Query: 241 KGNAVSLPRRTRSPAESAYEALFEKWVAPPLQLEQQTDDEEWLFGRTRKQDGQSTM--TN 300
           K   VS+P R RS AESAYEALFE+WVAPPL LEQQTDDEEWLFG TRKQDG+STM   N
Sbjct: 241 KSTVVSVPSRKRSSAESAYEALFEEWVAPPLLLEQQTDDEEWLFGTTRKQDGRSTMANNN 300

Query: 301 KAFSSVPSCGRSSSLWPRGQHLADADVYSLPYTIPF 327
            AFS+V SCGRSS+LWPRGQ+L DADVYSLPYTIPF
Sbjct: 301 NAFSTVSSCGRSSNLWPRGQYLVDADVYSLPYTIPF 328

[Close]

BLAST of HG10004765 vs. NCBI nr
Match: XP_023545923.1 (uncharacterized protein LOC111805212 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 431.8 bits (1109), Expect = 5.3e-117
Identity = 255/347 (73.49%), Postives = 279/347 (80.40%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKNDRKKEKSKDKKEKSKDKKERSK 60
           MSRCFPYPPPGYVRKVA TEAALIESIKLQSERRQ K D KKEKSK KKEKSKD+K +SK
Sbjct: 1   MSRCFPYPPPGYVRKVARTEAALIESIKLQSERRQHKTDSKKEKSKHKKEKSKDRKHKSK 60

Query: 61  DKKHKSKERKEKSSHSHDLKDRKQKECLNEAKDLQKGTKVEAEQLERSALTEEHGQ---P 120
           ++    KE KEKSS S DL D+KQK C+ E KD  +GTKVEAEQLE+S LTEEHGQ   P
Sbjct: 61  ER----KESKEKSSRSRDLNDQKQKACVKEVKDRLEGTKVEAEQLEKSGLTEEHGQPVWP 120

Query: 121 HSPAYLSDGTQISHKRKRDAALQPNEGCKPGKIIRIKLGSSLSQQEDSSAGSEQTCSTSG 180
           HSP YLSDGTQI+ KRKRD +LQP+EGCKPGK+IRIKL SSLSQQE+SSAGSEQ CS SG
Sbjct: 121 HSPGYLSDGTQINQKRKRDDSLQPDEGCKPGKVIRIKLASSLSQQENSSAGSEQMCSVSG 180

Query: 181 RDNSVDQKRDENSHGSIQQNTFFTNAETAVAVKDPTSSKPMIKDPPLHPVKD-------- 240
           RD S DQK DENS  S++++T F N+ETA+AVKD TSSKP IKDPP H VKD        
Sbjct: 181 RDCSRDQKSDENS--SVRRSTCFANSETALAVKDCTSSKPKIKDPPPHAVKDRTSSKPKI 240

Query: 241 ----------ISSKGNAVSLPRRTRSPAESAYEALFEKWVAPPLQLEQQTDDEEWLFGRT 300
                     ISS GN +SLP RTRSP ESAYEALFEKWV PPLQLEQQ DDEEWLF RT
Sbjct: 241 KDPSPHAVKEISSLGNVMSLP-RTRSPVESAYEALFEKWVPPPLQLEQQMDDEEWLF-RT 300

Query: 301 RKQDGQSTMTNKAFSSVPSCGRSSSLWPRGQHLADADVYSLPYTIPF 327
            KQDG+ST TN+AFSSVPSC RSSSLWPRGQ+LADADVYSLPYTIP+
Sbjct: 301 EKQDGRSTKTNEAFSSVPSC-RSSSLWPRGQYLADADVYSLPYTIPY 338

[Close]

BLAST of HG10004765 vs. NCBI nr
Match: XP_022961881.1 (DNA ligase 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 425.2 bits (1092), Expect = 4.9e-115
Identity = 251/329 (76.29%), Postives = 278/329 (84.50%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKNDRKKEKSKDKKEKSKDKKERSK 60
           MSRCFPYPPPGYVRKVA TEAALIESIKLQSERRQ K D KKEKSK KKEKSKD+K +SK
Sbjct: 1   MSRCFPYPPPGYVRKVARTEAALIESIKLQSERRQHKTDSKKEKSKHKKEKSKDRKHKSK 60

Query: 61  DKKHKSKERKEKSSHSHDLKDRKQKECLNEAKDLQKGTKVEAEQLERSALTEEHGQ---P 120
           ++    KERKEKSS S  L D+KQK C+ EAKD  +GTKVEAEQLE+S LTEEHGQ   P
Sbjct: 61  ER----KERKEKSSRS--LNDQKQKACVKEAKDRLEGTKVEAEQLEKSGLTEEHGQPVWP 120

Query: 121 HSPAYLSDGTQISHKRKRDAALQPNEGCKPGKIIRIKLGSSLSQQEDSSAGSEQTCSTSG 180
           HSP YLSDGTQI+HKRKRD +LQP+EGCKPGK+IRIKL SSLSQQE+SSAGSEQTCS SG
Sbjct: 121 HSPGYLSDGTQINHKRKRD-SLQPDEGCKPGKVIRIKLASSLSQQENSSAGSEQTCSVSG 180

Query: 181 RDNSVDQKRDENSHGSIQQNTFFTNAETAVAVKDPTSSKPMIKDPPLHPVKDISSKGNAV 240
           RD S    RDENS   ++++T F N+ETA+AVKD TSSKP IKDPP H VK+ISS GN +
Sbjct: 181 RDCS----RDENS-SVVRRSTCFANSETALAVKDCTSSKPKIKDPPPHAVKEISSLGNVM 240

Query: 241 SLPRRTRSPAESAYEALFEKWVAPPLQLEQQTDDEEWLFGRTRKQDGQSTMTNKAFSSVP 300
           SLP RTRSP ESAYEALFEKWV PPLQLEQQ DDEEWLF  T KQDG+S+ TN+AFSS+P
Sbjct: 241 SLP-RTRSPVESAYEALFEKWVPPPLQLEQQMDDEEWLF-PTEKQDGRSSKTNEAFSSIP 300

Query: 301 SCGRSSSLWPRGQHLADADVYSLPYTIPF 327
           SC RSSSLWPRGQ+LADADVYSLPYTIP+
Sbjct: 301 SC-RSSSLWPRGQYLADADVYSLPYTIPY 314

[Close]

BLAST of HG10004765 vs. ExPASy TrEMBL
Match: A0A5A7VB55 (DNA ligase 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001500 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 3.6e-119
Identity = 258/336 (76.79%), Postives = 274/336 (81.55%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKNDRKKEKSKDKKEKSKDKKERSK 60
           MSRCFPYPPPGYVRKVASTEAALIESIKLQSE RQSKNDRK EK + KKEKSKDKKERSK
Sbjct: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSE-RQSKNDRKNEKRRHKKEKSKDKKERSK 60

Query: 61  DKKHKSKER---KEKSSHSHDLKDRKQKECLNEAKDLQKGTKVEAEQLERSALTEEHGQ- 120
           DKKHKSKER   KEKSSHS  L D+K  +CL E KDL  GTKVEAEQLERS LTEEHGQ 
Sbjct: 61  DKKHKSKERKEHKEKSSHSRSLNDQKHNKCLKEVKDLLDGTKVEAEQLERSGLTEEHGQP 120

Query: 121 --PHSPAYLSDGTQISHKRKRDAALQPNEGCKPGKIIRIKLGS--SLSQQEDSSAGSEQT 180
             P SPAYLSDGTQI HKRKR A  QP+EGCKPGKIIRIKL S  SLSQQEDS+AGSEQ 
Sbjct: 121 VWPQSPAYLSDGTQIDHKRKRQAETQPDEGCKPGKIIRIKLASAPSLSQQEDSAAGSEQM 180

Query: 181 CSTSGRDNSVDQKRDENSHGSIQQNTFFTNAETAVAVKDPTSSKPMIKDPPLHPVKDISS 240
           CSTSGR NS DQK D +SHGS+       NAETAVAV  PT S P I+ PPLHP+ D +S
Sbjct: 181 CSTSGRYNSFDQKTDGDSHGSV------ANAETAVAV-HPTLSNPKIEHPPLHPIGDRNS 240

Query: 241 KGNAVSLPRRTRSPAESAYEALFEKWVAPPLQLEQQTDDEEWLFGRTRKQDGQSTM--TN 300
           K   VS+P R RS AESAYEALFE+WVAPPL LEQQTDDEEWLFG TRKQDG+STM   N
Sbjct: 241 KSTVVSVPSRKRSSAESAYEALFEEWVAPPLLLEQQTDDEEWLFGTTRKQDGRSTMANNN 300

Query: 301 KAFSSVPSCGRSSSLWPRGQHLADADVYSLPYTIPF 327
            AFS+V SCGRSS+LWPRGQ+L DADVYSLPYTIPF
Sbjct: 301 NAFSTVSSCGRSSNLWPRGQYLVDADVYSLPYTIPF 328

[Close]

BLAST of HG10004765 vs. ExPASy TrEMBL
Match: A0A1S3BBZ0 (uncharacterized protein LOC103488397 OS=Cucumis melo OX=3656 GN=LOC103488397 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 3.6e-119
Identity = 258/336 (76.79%), Postives = 274/336 (81.55%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKNDRKKEKSKDKKEKSKDKKERSK 60
           MSRCFPYPPPGYVRKVASTEAALIESIKLQSE RQSKNDRK EK + KKEKSKDKKERSK
Sbjct: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSE-RQSKNDRKNEKRRHKKEKSKDKKERSK 60

Query: 61  DKKHKSKER---KEKSSHSHDLKDRKQKECLNEAKDLQKGTKVEAEQLERSALTEEHGQ- 120
           DKKHKSKER   KEKSSHS  L D+K  +CL E KDL  GTKVEAEQLERS LTEEHGQ 
Sbjct: 61  DKKHKSKERKEHKEKSSHSRSLNDQKHNKCLKEVKDLLDGTKVEAEQLERSGLTEEHGQP 120

Query: 121 --PHSPAYLSDGTQISHKRKRDAALQPNEGCKPGKIIRIKLGS--SLSQQEDSSAGSEQT 180
             P SPAYLSDGTQI HKRKR A  QP+EGCKPGKIIRIKL S  SLSQQEDS+AGSEQ 
Sbjct: 121 VWPQSPAYLSDGTQIDHKRKRQAETQPDEGCKPGKIIRIKLASAPSLSQQEDSAAGSEQM 180

Query: 181 CSTSGRDNSVDQKRDENSHGSIQQNTFFTNAETAVAVKDPTSSKPMIKDPPLHPVKDISS 240
           CSTSGR NS DQK D +SHGS+       NAETAVAV  PT S P I+ PPLHP+ D +S
Sbjct: 181 CSTSGRYNSFDQKTDGDSHGSV------ANAETAVAV-HPTLSNPKIEHPPLHPIGDRNS 240

Query: 241 KGNAVSLPRRTRSPAESAYEALFEKWVAPPLQLEQQTDDEEWLFGRTRKQDGQSTM--TN 300
           K   VS+P R RS AESAYEALFE+WVAPPL LEQQTDDEEWLFG TRKQDG+STM   N
Sbjct: 241 KSTVVSVPSRKRSSAESAYEALFEEWVAPPLLLEQQTDDEEWLFGTTRKQDGRSTMANNN 300

Query: 301 KAFSSVPSCGRSSSLWPRGQHLADADVYSLPYTIPF 327
            AFS+V SCGRSS+LWPRGQ+L DADVYSLPYTIPF
Sbjct: 301 NAFSTVSSCGRSSNLWPRGQYLVDADVYSLPYTIPF 328

[Close]

BLAST of HG10004765 vs. ExPASy TrEMBL
Match: A0A6J1HBK0 (DNA ligase 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462522 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 2.4e-115
Identity = 251/329 (76.29%), Postives = 278/329 (84.50%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKNDRKKEKSKDKKEKSKDKKERSK 60
           MSRCFPYPPPGYVRKVA TEAALIESIKLQSERRQ K D KKEKSK KKEKSKD+K +SK
Sbjct: 1   MSRCFPYPPPGYVRKVARTEAALIESIKLQSERRQHKTDSKKEKSKHKKEKSKDRKHKSK 60

Query: 61  DKKHKSKERKEKSSHSHDLKDRKQKECLNEAKDLQKGTKVEAEQLERSALTEEHGQ---P 120
           ++    KERKEKSS S  L D+KQK C+ EAKD  +GTKVEAEQLE+S LTEEHGQ   P
Sbjct: 61  ER----KERKEKSSRS--LNDQKQKACVKEAKDRLEGTKVEAEQLEKSGLTEEHGQPVWP 120

Query: 121 HSPAYLSDGTQISHKRKRDAALQPNEGCKPGKIIRIKLGSSLSQQEDSSAGSEQTCSTSG 180
           HSP YLSDGTQI+HKRKRD +LQP+EGCKPGK+IRIKL SSLSQQE+SSAGSEQTCS SG
Sbjct: 121 HSPGYLSDGTQINHKRKRD-SLQPDEGCKPGKVIRIKLASSLSQQENSSAGSEQTCSVSG 180

Query: 181 RDNSVDQKRDENSHGSIQQNTFFTNAETAVAVKDPTSSKPMIKDPPLHPVKDISSKGNAV 240
           RD S    RDENS   ++++T F N+ETA+AVKD TSSKP IKDPP H VK+ISS GN +
Sbjct: 181 RDCS----RDENS-SVVRRSTCFANSETALAVKDCTSSKPKIKDPPPHAVKEISSLGNVM 240

Query: 241 SLPRRTRSPAESAYEALFEKWVAPPLQLEQQTDDEEWLFGRTRKQDGQSTMTNKAFSSVP 300
           SLP RTRSP ESAYEALFEKWV PPLQLEQQ DDEEWLF  T KQDG+S+ TN+AFSS+P
Sbjct: 241 SLP-RTRSPVESAYEALFEKWVPPPLQLEQQMDDEEWLF-PTEKQDGRSSKTNEAFSSIP 300

Query: 301 SCGRSSSLWPRGQHLADADVYSLPYTIPF 327
           SC RSSSLWPRGQ+LADADVYSLPYTIP+
Sbjct: 301 SC-RSSSLWPRGQYLADADVYSLPYTIPY 314

[Close]

BLAST of HG10004765 vs. ExPASy TrEMBL
Match: A0A6J1KC15 (uncharacterized protein LOC111492505 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492505 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 2.2e-113
Identity = 249/347 (71.76%), Postives = 274/347 (78.96%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKNDRKKEKSKDKKEKSKDKKERSK 60
           MSRCFPYPPPGYVRKVA TEAALIESIKLQSERRQ K D KKEKSK KKEKSKD+K +S 
Sbjct: 1   MSRCFPYPPPGYVRKVARTEAALIESIKLQSERRQHKTDSKKEKSKHKKEKSKDRKHKSN 60

Query: 61  DKKHKSKERKEKSSHSHDLKDRKQKECLNEAKDLQKGTKVEAEQLERSALTEEHGQ---P 120
           ++    KE KEKSS S DL D+K K C+ EAKD  +GTKVEAEQLE+S LTEEHGQ   P
Sbjct: 61  ER----KESKEKSSRSRDLNDQKHKVCVKEAKDRLEGTKVEAEQLEKSGLTEEHGQPVWP 120

Query: 121 HSPAYLSDGTQISHKRKRDAALQPNEGCKPGKIIRIKLGSSLSQQEDSSAGSEQTCSTSG 180
           HSP YLSDGTQI+HKRKRD +LQP+EGCKPGK+IRIKL SSLSQQE+SSAG E TCS SG
Sbjct: 121 HSPGYLSDGTQINHKRKRDDSLQPDEGCKPGKVIRIKLASSLSQQENSSAGCELTCSVSG 180

Query: 181 RDNSVDQKRDENSHGSIQQNTFFTNAETAVAVKDPTSSKPMIKDPPLHPVKD-------- 240
           RD S DQK DENS   ++++T F N+ETA AVKD TSSKP IKDPP H VKD        
Sbjct: 181 RDISRDQKSDENS-SVVRRSTCFANSETARAVKDCTSSKPKIKDPPPHAVKDRTSSKPKI 240

Query: 241 ----------ISSKGNAVSLPRRTRSPAESAYEALFEKWVAPPLQLEQQTDDEEWLFGRT 300
                     ISS GN +SLP RTRSP ESAYEALFEKWV PPLQLEQQ DDEEWLF  T
Sbjct: 241 KDPSPHAVKEISSLGNVMSLP-RTRSPVESAYEALFEKWVPPPLQLEQQMDDEEWLF-PT 300

Query: 301 RKQDGQSTMTNKAFSSVPSCGRSSSLWPRGQHLADADVYSLPYTIPF 327
            KQDG+ST TN+AFSS+PSC R+SSLWPRGQ+LA ADVYSLPYTIP+
Sbjct: 301 EKQDGRSTKTNEAFSSIPSC-RNSSLWPRGQYLAVADVYSLPYTIPY 339

[Close]

BLAST of HG10004765 vs. ExPASy TrEMBL
Match: A0A6J1CT76 (chromatin assembly factor 1 subunit A-like OS=Momordica charantia OX=3673 GN=LOC111013996 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 7.2e-112
Identity = 245/333 (73.57%), Postives = 268/333 (80.48%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKNDRKKEKSKDKKEKSKDKKERSK 60
           MSRCFPYPPPGY  KVA TEAALIESIKLQSER+QSK+DRKKEKSK +KE+S    E+SK
Sbjct: 1   MSRCFPYPPPGYAGKVARTEAALIESIKLQSERQQSKHDRKKEKSKHRKERS----EKSK 60

Query: 61  DKKHKSKERKEKSSHSHDLKDRKQKECLNEAKDLQKGTKVEAEQLERSALTEEHGQ---P 120
           +KK + KERKEKSS S DL D+KQKEC  +A+D  KGTKVEAEQLE+S LTEEHGQ   P
Sbjct: 61  EKKQRRKERKEKSSCSCDLNDQKQKECAKQAEDRLKGTKVEAEQLEKSGLTEEHGQPVWP 120

Query: 121 HSPAYLSDGTQISHKRKRDAALQPNEGCKPGKIIRIKLGSSLSQQEDSSAGSEQTCSTSG 180
            SP YLSDGTQI+HKRKRDA LQPNE  KPGKIIRIKL SSLS QEDSSA ++QTCSTSG
Sbjct: 121 QSPGYLSDGTQINHKRKRDAKLQPNEDSKPGKIIRIKLASSLSNQEDSSADTQQTCSTSG 180

Query: 181 RDNSVDQKRDENSHGSIQQNTFFTNAETAVAVKDPTSSKPMIKD--PPLHPVKDISSKGN 240
           R + VDQKRDENS G  QQ   FTN+ T VAV++    KP IKD    +H VKDI  +GN
Sbjct: 181 RYDCVDQKRDENSCGPNQQKPCFTNSNTVVAVEE-APPKPRIKDHSRSVHAVKDIRPQGN 240

Query: 241 AVSLPRRTRSPAESAYEALFEKWVAPPLQLEQQTDDEEWLFGRTRKQDGQST--MTNKAF 300
            V  P RTRSPAES YEALFEKW+ PPLQLEQQ DDEEWLFG TRKQDGQ+T   TNKAF
Sbjct: 241 VVPFPTRTRSPAESEYEALFEKWIPPPLQLEQQMDDEEWLFG-TRKQDGQTTKATTNKAF 300

Query: 301 SSVPSCGRSSSLWPRGQHLADADVYSLPYTIPF 327
           S VPSC RSSSLWPRGQ+L DADVYSLPYTIPF
Sbjct: 301 SPVPSC-RSSSLWPRGQYLPDADVYSLPYTIPF 326

[Close]

BLAST of HG10004765 vs. TAIR 10
Match: AT1G20100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75860.1); Has 471 Blast hits to 438 proteins in 92 species: Archae - 0; Bacteria - 14; Metazoa - 217; Fungi - 43; Plants - 91; Viruses - 1; Other Eukaryotes - 105 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-13
Identity = 100/337 (29.67%), Postives = 154/337 (45.70%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKNDRKKEKSKDKKEKSKDKKERSK 60
           MSR F  PPP Y R  A+ +  L+E  K++     SK   +KEK + KKEK   K+++S 
Sbjct: 1   MSRYFTSPPPVYARNWANGQ-NLVEWTKIERPIVDSKKLHRKEKKEKKKEKKLKKEKKSL 60

Query: 61  DKKHKSKERKEKSSHSHDLKDRKQKECLNEAKDLQKGTKVEAEQLERSALTEEHGQPHSP 120
           ++K+ +                             K    E+EQLE+S LTEE  QP   
Sbjct: 61  EQKYST----------------------------TKTVSYESEQLEKSCLTEEFEQP-QV 120

Query: 121 AYLSDGTQISHKRKRD---AALQPNEGCKP--GKIIRIKLGSSLSQQEDSSAGSEQTCST 180
            YLSDG+Q S KR+R+   A ++      P  GK +RI++     ++ ++    +  CST
Sbjct: 121 GYLSDGSQNSKKRRRETSPAVVESQIKATPVAGKPLRIRIVFKKPKEAEAVPQEDPVCST 180

Query: 181 SGRDNSVDQKRDENSHGSIQQNTFFTNAETAVAVKDPTSSKPMIKDPPLHPVKDISSKGN 240
           SG       +R      S+   +   + + AV      S K  I          IS    
Sbjct: 181 SG------TQRPSELPSSVSLPS-ICDHDVAVPSTSLESGKVAI----------ISE--- 240

Query: 241 AVSLPRRTRSPA-ESAYEALFEKWVAPPLQLEQ-QTDDEEWLFGRTRKQDGQST----MT 300
             S  R+   P+ ES Y +LF++ V P + LE+  +  ++WLFG +RK++  S      T
Sbjct: 241 --SKKRKKHKPSKESRYNSLFDELVPPCISLEEDDSSSDDWLFGTSRKENVSSAKSSYKT 285

Query: 301 NKAFSSVPSCGRSSSLWPRGQHLADADVYSLPYTIPF 327
           ++         R  S  PR   L++  ++SLPYT+PF
Sbjct: 301 DEDTIMSLQTSRDCSSLPRAMLLSEVGIFSLPYTVPF 285

[Close]

BLAST of HG10004765 vs. TAIR 10
Match: AT1G75860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20100.1); Has 258 Blast hits to 235 proteins in 58 species: Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 16; Plants - 90; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 5.4e-11
Identity = 100/340 (29.41%), Postives = 145/340 (42.65%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKNDRKKEKSKDKKEKSKDKKERSK 60
           MSR    PP  + R     +  L+ES KL+     SK   + EK K+KKEK K+KKE  +
Sbjct: 1   MSRVLTCPPLVFARNHVGVQ-NLVESTKLKRITLDSKKAHRIEK-KEKKEKRKEKKETKR 60

Query: 61  DKKHKSKERKEKSSHSHDLKDRKQKECLNEAKDLQKGTKVEAEQLERSALTEEHGQPHSP 120
           +K HK         HS    D   K     +K +      E++ LE+S LT+E  +P   
Sbjct: 61  EKSHK---------HSIKATDNHHKLIFLPSKKVSD----ESDSLEKSGLTDELEEPQKH 120

Query: 121 -AYLSDGTQISHKRKRDAALQPNEGC-----KPGKIIRIKLGSSLSQQEDSSAGSEQ-TC 180
             YLSDG+Q S KR RD +    E         GK +RI++     ++E  +   E   C
Sbjct: 121 LGYLSDGSQNSKKRIRDDSPPAVESLIKAAPVAGKPLRIRMVFKKPKEEVPTLPREAVVC 180

Query: 181 STSGRDNSVDQKRDENSHGSIQQNTFFTN-AETAVAVKDPTSSKPMIKDPPLHPVKDISS 240
           ST+   +   Q    +S  S + +    N   T++A  D T  +                
Sbjct: 181 STTVAKSLSHQDVITSSISSSKTSELEKNLPSTSIAAIDETKKR---------------- 240

Query: 241 KGNAVSLPRRTRSPAESAYEALFEKWVAPPLQLEQQTDDEE---WLFGRTRKQDGQSTMT 300
                   ++ RS  E  Y ALF+ W  P + +   + ++    WLFG       Q  + 
Sbjct: 241 --------KKHRSSKEDQYNALFDGWTPPSMCIADASSNDNGDYWLFGNKT----QEVLK 297

Query: 301 NKAFSSVPS---CGRSSSLWPRGQHLADADVYSLPYTIPF 327
            KA   V          S WPR Q L++  +YSLPYT+PF
Sbjct: 301 PKAAVKVDDDTMMRPGDSSWPRAQFLSEVGIYSLPYTVPF 297

[Close]

BLAST of HG10004765 vs. TAIR 10
Match: AT2G17787.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35940.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 5.2e-06
Identity = 99/356 (27.81%), Postives = 148/356 (41.57%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKNDRK-KEKSKDKKEKSKDKKERS 60
           MSRC+P+PPPGYV K      +LIESIK    + + K DRK K   KD+K++     E  
Sbjct: 1   MSRCYPFPPPGYVWK-----ESLIESIK--GAKEEVKKDRKHKRNEKDRKDRD---NEAG 60

Query: 61  KDKKHKSKERKEKSSHSHDLKDRKQKECLNEAKDLQKGTKVEAEQLERSALTEEHGQPHS 120
           + +KH+ K R            RK +  +   K +      E E LE+S  T E     S
Sbjct: 61  RSRKHRHKRR------------RKDEGAIASGKLVSS----EVELLEKSCQTVELELQTS 120

Query: 121 PAYLSDGTQISHKRKRDAALQP--------------NEGCKPGKIIRIKLGSSLSQQE-- 180
                D T  S++R +    QP               E  + G ++  K       +E  
Sbjct: 121 SQNSCDSTLHSNERPKQIQSQPLDETSIRTRLPDKGQEDPEDGVMMTSKDQKQRFSREML 180

Query: 181 DSSAGSEQTCSTSGRDNSVDQKRDENSHGSIQQNTFFTNAE-TAVAVKDPTSSKPMIKDP 240
           D+S  +     + G      +KR + + GS ++ T   N E  +V  KD        K P
Sbjct: 181 DASQAATAPNESVGHSRVCQEKRIDPTFGSSREITTKLNKEKKSVPSKDNRKVSKEKKMP 240

Query: 241 ------PLHPVKDISS----KGNAVSLPRRTRSPAESAYEALFEKWVAPPLQ--LEQQTD 300
                 PL   K  SS     G +  L R+           L E W    ++  L    D
Sbjct: 241 SLSSCNPLEQEKPTSSHQETPGPSKLLCRKCPPSMAGQLLNLIENWAPDRVESKLTDSED 300

Query: 301 DEEWLFGRTRKQDGQSTMTNKAFSSVPSCGRSSSLWPRGQHLADADVYSLPYTIPF 327
            E WLF +   +  Q  ++N+  +     G SS +WP  + L +A+V++LP+T+PF
Sbjct: 301 QEWWLFIKFGAKSPQ--VSNQKTNQ----GSSSMVWPTARFLPEAEVHALPFTVPF 324

[Close]

BLAST of HG10004765 vs. TAIR 10
Match: AT1G20100.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 5.8e-05
Identity = 59/182 (32.42%), Postives = 88/182 (48.35%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKNDRKKEKSKDKKEKSKDKKERSK 60
           MSR F  PPP Y R  A+ +  L+E  K++     SK   +KEK + KKEK   K+++S 
Sbjct: 1   MSRYFTSPPPVYARNWANGQ-NLVEWTKIERPIVDSKKLHRKEKKEKKKEKKLKKEKKSL 60

Query: 61  DKKHKSKERKEKSSHSHDLKDRKQKECLNEAKDLQKGTKVEAEQLERSALTEEHGQPHSP 120
           ++K+ +                             K    E+EQLE+S LTEE  QP   
Sbjct: 61  EQKYST----------------------------TKTVSYESEQLEKSCLTEEFEQP-QV 120

Query: 121 AYLSDGTQISHKRKRD---AALQPNEGCKP--GKIIRIKLGSSLSQQEDSSAGSEQTCST 178
            YLSDG+Q S KR+R+   A ++      P  GK +RI++     ++ ++    +  CST
Sbjct: 121 GYLSDGSQNSKKRRRETSPAVVESQIKATPVAGKPLRIRIVFKKPKEAEAVPQEDPVCST 152

[Close]

BLAST of HG10004765 vs. TAIR 10
Match: AT4G35940.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17787.1). )

HSP 1 Score: 44.7 bits (104), Expect = 1.7e-04
Identity = 111/408 (27.21%), Postives = 167/408 (40.93%), Query Frame = 0


Query: 1   MSRCFPYPPPGYVRKVASTEAALIESIKLQSERRQSKNDRKKEKSKDKKEKSKDKKER-- 60
           MSRCFP+PPPGYV      EA ++ SIK   E +  K  R+K++  DKK+K KDKKER  
Sbjct: 1   MSRCFPFPPPGYVLNGIRDEAVIVSSIK-GVEEKAKKEQRRKDRRSDKKDK-KDKKERKE 60

Query: 61  ---SKDKKHKSKERKEKSSHSHDLKDRKQKECLNEAKDLQKGTKVEAEQLERSALTEEHG 120
               K+KK K +E KE  S     K R++KE   +     K  + E   LE+S+LT E  
Sbjct: 61  KKEKKEKKRKEREGKEVGSEKRSHK-RRRKEDGAKVDLFHKLKESEVNCLEKSSLTVERE 120

Query: 121 QPHSPAYLS----------------------------------------DGTQISHKRKR 180
              S +  S                                        DG   ++  KR
Sbjct: 121 LLQSTSQNSCDSTLNSNEMLPKQKEVQQPLDGRHNNNNNEKRVEKQQPLDGRHNNNNEKR 180

Query: 181 DAALQPNEG-CKPGKIIRIKLGSSLSQQEDSSAGS--EQTCSTSGRDNSVDQKRDENS-- 240
               QP +G        RI+    L+ + +++     E+    +GR N+ ++KR E    
Sbjct: 181 VEKQQPLDGRHNNNNEKRIEKQQPLNGRHNNNNEKLMEKQQPLNGRHNNNNEKRIEKQQP 240

Query: 241 ----HGSIQQ--------NTFFTNAETAVAVKDPTSSKPMIKDPPL---HPVKDISSKGN 300
               H + ++        +    N ++A     P   K   KDP     H  + ISS   
Sbjct: 241 LNGRHNNKEKQKEKQQPLDVRHNNNDSAEHASKPREEKR--KDPIFRGKHGKEKISS--- 300

Query: 301 AVSLPRRTRSPAES----------AYEALFEKWVAPPLQLEQQTD----DEEWLFGRTRK 327
             S  R T  P +S           +  + E WV  P  +E++ D    ++E  +   +K
Sbjct: 301 --SSTRETYQPPKSLCNCPPSMVLQFLDVVENWV--PNTIERRVDLINSEDEECWWSMKK 360

The following BLAST results are available for this feature:

BLAST of HG10004765 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885448.1	2.6e-140	87.84	DNA ligase 1 isoform X1 [Benincasa hispida]	[more]
XP_038885449.1	1.9e-135	86.63	nucleoporin GLE1 isoform X2 [Benincasa hispida]	[more]
XP_008445332.1	7.4e-119	76.79	PREDICTED: uncharacterized protein LOC103488397 [Cucumis melo] >KAA0064838.1 DNA...	[more]
XP_023545923.1	5.3e-117	73.49	uncharacterized protein LOC111805212 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022961881.1	4.9e-115	76.29	DNA ligase 1 isoform X1 [Cucurbita moschata]	[more]

BLAST of HG10004765 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10004765 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VB55	3.6e-119	76.79	DNA ligase 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A1S3BBZ0	3.6e-119	76.79	uncharacterized protein LOC103488397 OS=Cucumis melo OX=3656 GN=LOC103488397 PE=...	[more]
A0A6J1HBK0	2.4e-115	76.29	DNA ligase 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462522 PE=4 SV=1	[more]
A0A6J1KC15	2.2e-113	71.76	uncharacterized protein LOC111492505 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1CT76	7.2e-112	73.57	chromatin assembly factor 1 subunit A-like OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of HG10004765 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20100.1	1.2e-13	29.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G75860.1	5.4e-11	29.41	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G17787.1	5.2e-06	27.81	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G20100.2	5.8e-05	32.42	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G35940.2	1.7e-04	27.21	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 42..69
None	No IPR available	COILS	Coil	Coil	coord: 88..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..305
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..244
None	No IPR available	PANTHER	PTHR34660:SF7	DNA LIGASE	coord: 1..326
None	No IPR available	PANTHER	PTHR34660	MYB-LIKE PROTEIN X	coord: 1..326

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004765.1	HG10004765.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016874	ligase activity