HG10004639 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004639
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	V-type proton ATPase subunit c''1
Location	Chr08: 19138773 .. 19139925 (+)
RNA-Seq Expression	HG10004639
Synteny	HG10004639

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAGCGCCGTCGTGCTTGCACGTTCTAGCTCCTGGGCTCGCGCTCTCATCAACATCTCTCCCTACACTTTCTCCGCCATCGGCATCGCCATCGCCATCGGCGTTTCCGTCCTCGGCGCCGCCTGGTATCTTATTCAGCACTCTTTGTGTTTCTCTTGAAGAATGTTTATTTTGTTGATTTCCTTTCTGAATGATGAGAATTTGCGCGGTTGCGAATTTGATAGGGGGATTTACATCACGGGAAGCAGTTTGATTGGTGCAGCGATCAAAGCTCCTCGTATTACTTCCAAGAACTTGATTAGGTGAAGCCCTAACTTTAGTTGATGAATTGTTCATTTTACTGTTGGTTGGATTGCTACTTTTGGTCGGGTTCGGATGTATAATTTGGGATTTTTATTGCTTAATTCTTGGACTGATACAACTGAGAACGAAGAAACTCGTTAGACTTTCTTAGAAATTTGAATAAATTAGAACAGAATTGAGCGCGAGCCTAGTGTTTCTGGAAAAACAGTTGTTGAATGTAATATTGTAGATTCCTTATTATTTTGTTTGGAGAATCCCATCCAGCGTCTGCCTCTACCATATTAAATGGTCCATCAAGTTTCATTGCTGAATCTAAGCATCAAGCTACATTTTTCTGGTGATTACTTTGATTATAACAACTTGAATGTTGTGTTCTTTCAGTGTAATTTTCTGTGAAGCTGTTGCTATATATGGTGTCATTGTTGCCATTATCTTACAGACCAAGTTAGAGAGTGTGTCAGCATCTCAGATATATGCTCCCGAGTCTCTAAGAGCAGGATATGCAATTTTTGCATCTGGAATCATAGTTGGCTTTGCAAACCTTGTCTGCGGGTTTGTTGCCTTCTTTCTTACTTTGTTTTTTAAATCAAAATCCTCATATTTGGTTCTTTTAAATTTCGTTTACTTTTCAGTTTGATTGTTTGTTCTGAATCTCTTCTGATGCTTTCTTTCAAGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCATTATCAGATGCCCAAAACTCCTCCCTCTTTGTGAAGATTCTTGTAATCGAGATTTTTGGCAGTGCACTTGGGTTGTTCGGAGTGATTGTTGGAATAATTATGTCAGCTCAAGCCTCTTGGCCTGCCAAGAGAGGTTAA

mRNA sequence

ATGTCCAGCGCCGTCGTGCTTGCACGTTCTAGCTCCTGGGCTCGCGCTCTCATCAACATCTCTCCCTACACTTTCTCCGCCATCGGCATCGCCATCGCCATCGGCGTTTCCGTCCTCGGCGCCGCCTGGGGGATTTACATCACGGGAAGCAGTTTGATTGGTGCAGCGATCAAAGCTCCTCGTATTACTTCCAAGAACTTGATTAGTGTAATTTTCTGTGAAGCTGTTGCTATATATGGTGTCATTGTTGCCATTATCTTACAGACCAAGTTAGAGAGTGTGTCAGCATCTCAGATATATGCTCCCGAGTCTCTAAGAGCAGGATATGCAATTTTTGCATCTGGAATCATAGTTGGCTTTGCAAACCTTGTCTGCGGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCATTATCAGATGCCCAAAACTCCTCCCTCTTTGTGAAGATTCTTGTAATCGAGATTTTTGGCAGTGCACTTGGGTTGTTCGGAGTGATTGTTGGAATAATTATGTCAGCTCAAGCCTCTTGGCCTGCCAAGAGAGGTTAA

Coding sequence (CDS)

ATGTCCAGCGCCGTCGTGCTTGCACGTTCTAGCTCCTGGGCTCGCGCTCTCATCAACATCTCTCCCTACACTTTCTCCGCCATCGGCATCGCCATCGCCATCGGCGTTTCCGTCCTCGGCGCCGCCTGGGGGATTTACATCACGGGAAGCAGTTTGATTGGTGCAGCGATCAAAGCTCCTCGTATTACTTCCAAGAACTTGATTAGTGTAATTTTCTGTGAAGCTGTTGCTATATATGGTGTCATTGTTGCCATTATCTTACAGACCAAGTTAGAGAGTGTGTCAGCATCTCAGATATATGCTCCCGAGTCTCTAAGAGCAGGATATGCAATTTTTGCATCTGGAATCATAGTTGGCTTTGCAAACCTTGTCTGCGGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCATTATCAGATGCCCAAAACTCCTCCCTCTTTGTGAAGATTCTTGTAATCGAGATTTTTGGCAGTGCACTTGGGTTGTTCGGAGTGATTGTTGGAATAATTATGTCAGCTCAAGCCTCTTGGCCTGCCAAGAGAGGTTAA

Protein sequence

MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAKRG

Homology

[Close]

BLAST of HG10004639 vs. NCBI nr
Match: XP_038885623.1 (V-type proton ATPase subunit c''1 [Benincasa hispida])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

[Close]

BLAST of HG10004639 vs. NCBI nr
Match: XP_004138742.1 (V-type proton ATPase subunit c''1 [Cucumis sativus] >KGN62907.1 hypothetical protein Csa_021826 [Cucumis sativus])

HSP 1 Score: 323.9 bits (829), Expect = 8.6e-85
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+AVVL RSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAVVLTRSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

[Close]

BLAST of HG10004639 vs. NCBI nr
Match: XP_008445147.1 (PREDICTED: V-type proton ATPase subunit c''1 [Cucumis melo] >KAA0064963.1 V-type proton ATPase subunit c''1 [Cucumis melo var. makuwa])

HSP 1 Score: 323.6 bits (828), Expect = 1.1e-84
Identity = 179/182 (98.35%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+A VLARSSSWARAL+NISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVLARSSSWARALVNISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

[Close]

BLAST of HG10004639 vs. NCBI nr
Match: XP_022962488.1 (V-type proton ATPase subunit c''1-like [Cucurbita moschata] >XP_022996666.1 V-type proton ATPase subunit c''1-like [Cucurbita maxima] >KAG6598594.1 V-type proton ATPase subunit c''1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029527.1 V-type proton ATPase subunit c''1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 320.5 bits (820), Expect = 9.6e-84
Identity = 177/182 (97.25%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSSAV++ARSSSW+RALINISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSSAVLVARSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
            G
Sbjct: 181 TG 182

[Close]

BLAST of HG10004639 vs. NCBI nr
Match: XP_023547273.1 (V-type proton ATPase subunit c''1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.2 bits (814), Expect = 4.7e-83
Identity = 175/182 (96.15%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+AV++ARSSSW+RALINISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAVLVARSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVS+SQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSSSQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
            G
Sbjct: 181 TG 182

[Close]

BLAST of HG10004639 vs. ExPASy Swiss-Prot
Match: Q9SZY7 (V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE=1 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 5.3e-77
Identity = 159/180 (88.33%), Postives = 168/180 (93.33%), Query Frame = 0


Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS  V L  +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+AP
Sbjct: 1   MSGVVALGHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

[Close]

BLAST of HG10004639 vs. ExPASy Swiss-Prot
Match: Q9SLA2 (V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.3e-75
Identity = 156/175 (89.14%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 6   VLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSK 65
           V   +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+APRITSK
Sbjct: 4   VAIHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSK 63

Query: 66  NLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVC 125
           NLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGFANLVC
Sbjct: 64  NLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVC 123

Query: 126 GLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 181
           GLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 124 GLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 178

[Close]

BLAST of HG10004639 vs. ExPASy Swiss-Prot
Match: P23968 (V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VMA16 PE=1 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.7e-46
Identity = 94/165 (56.97%), Postives = 135/165 (81.82%), Query Frame = 0


Query: 12  SWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVI 71
           ++ + L+  SPY ++ +GIA+ +G+SV+GAAWGI+ITGSS+IGA ++APRIT+KNLIS+I
Sbjct: 46  NFGKFLLRTSPYMWANLGIALCVGLSVVGAAWGIFITGSSMIGAGVRAPRITTKNLISII 105

Query: 72  FCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGI 131
           FCE VAIYG+I+AI+  +KL   +A  +Y+  +L  GY++F +GI VG +NL+CG+ VGI
Sbjct: 106 FCEVVAIYGLIIAIVFSSKLTVATAENMYSKSNLYTGYSLFWAGITVGASNLICGIAVGI 165

Query: 132 IGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQAS 177
            G++ A+SDA +S+LFVKILVIEIFGS LGL G+IVG++M+ +AS
Sbjct: 166 TGATAAISDAADSALFVKILVIEIFGSILGLLGLIVGLLMAGKAS 210

[Close]

BLAST of HG10004639 vs. ExPASy Swiss-Prot
Match: Q91V37 (V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus OX=10090 GN=Atp6v0b PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.5e-44
Identity = 94/160 (58.75%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 17  LINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 76
           L   SP+ +S +GI +AI +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCEAV
Sbjct: 41  LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAV 100

Query: 77  AIYGVIVAIILQTKLESVSASQIYA--PESLRAGYAIFASGIIVGFANLVCGLCVGIIGS 136
           AIYG+I+AI++    E  SA++  A    +  AGY++F +G+ VG +NL CG+CVGI+GS
Sbjct: 101 AIYGIIMAIVISNMAEPFSATEPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGS 160

Query: 137 SCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 175
             AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++
Sbjct: 161 GAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200

[Close]

BLAST of HG10004639 vs. ExPASy Swiss-Prot
Match: Q2TA24 (V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.9e-44
Identity = 93/160 (58.13%), Postives = 126/160 (78.75%), Query Frame = 0


Query: 17  LINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 76
           L   SP+ +S +GI +AI +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCEAV
Sbjct: 41  LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAV 100

Query: 77  AIYGVIVAIILQTKLESVSAS--QIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGS 136
           AIYG+I+AI++    E  SA+  +     +  AGY++F +G+ VG +NL CG+CVGI+GS
Sbjct: 101 AIYGIIMAIVISNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGS 160

Query: 137 SCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 175
             AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++
Sbjct: 161 GAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200

[Close]

BLAST of HG10004639 vs. ExPASy TrEMBL
Match: A0A0A0LQ28 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379870 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.2e-85
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+AVVL RSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAVVLTRSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

[Close]

BLAST of HG10004639 vs. ExPASy TrEMBL
Match: A0A5A7V9W8 (V-type proton ATPase subunit c''1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002840 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.5e-85
Identity = 179/182 (98.35%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+A VLARSSSWARAL+NISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVLARSSSWARALVNISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

[Close]

BLAST of HG10004639 vs. ExPASy TrEMBL
Match: A0A1S3BBZ9 (V-type proton ATPase subunit c''1 OS=Cucumis melo OX=3656 GN=LOC103488269 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.5e-85
Identity = 179/182 (98.35%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+A VLARSSSWARAL+NISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVLARSSSWARALVNISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

[Close]

BLAST of HG10004639 vs. ExPASy TrEMBL
Match: A0A6J1K5F4 (V-type proton ATPase subunit c''1-like OS=Cucurbita maxima OX=3661 GN=LOC111491843 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.6e-84
Identity = 177/182 (97.25%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSSAV++ARSSSW+RALINISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSSAVLVARSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
            G
Sbjct: 181 TG 182

[Close]

BLAST of HG10004639 vs. ExPASy TrEMBL
Match: A0A6J1HEY2 (V-type proton ATPase subunit c''1-like OS=Cucurbita moschata OX=3662 GN=LOC111462909 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.6e-84
Identity = 177/182 (97.25%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSSAV++ARSSSW+RALINISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSSAVLVARSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
            G
Sbjct: 181 TG 182

[Close]

BLAST of HG10004639 vs. TAIR 10
Match: AT4G32530.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 288.5 bits (737), Expect = 3.7e-78
Identity = 159/180 (88.33%), Postives = 168/180 (93.33%), Query Frame = 0


Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS  V L  +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+AP
Sbjct: 1   MSGVVALGHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

[Close]

BLAST of HG10004639 vs. TAIR 10
Match: AT2G25610.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 283.9 bits (725), Expect = 9.2e-77
Identity = 156/175 (89.14%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 6   VLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSK 65
           V   +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+APRITSK
Sbjct: 4   VAIHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSK 63

Query: 66  NLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVC 125
           NLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGFANLVC
Sbjct: 64  NLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVC 123

Query: 126 GLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 181
           GLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 124 GLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 178

[Close]

BLAST of HG10004639 vs. TAIR 10
Match: AT4G32530.2 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 272.7 bits (696), Expect = 2.1e-73
Identity = 159/210 (75.71%), Postives = 168/210 (80.00%), Query Frame = 0


Query: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS  V L  +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+AP
Sbjct: 1   MSGVVALGHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCG------------------------------LCVGIIGSSCALSDAQNSSLFVKI 180
           ANLVCG                              LCVGIIGSSCALSDAQNS+LFVKI
Sbjct: 121 ANLVCGSVSTLFSFLTVLVFGFHCQICNRGPHFSCRLCVGIIGSSCALSDAQNSTLFVKI 180

[Close]

BLAST of HG10004639 vs. TAIR 10
Match: AT1G75630.1 (vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 53/151 (35.10%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 25  FSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 84
           F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 15  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 74

Query: 85  IILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS 144
           +I+ T +   + S       L  GYA  +SG+  G A L  G+ +GI+G +   ++AQ  
Sbjct: 75  VIISTGINPKAKSYY-----LFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQP 134

Query: 145 SLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
            LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 135 KLFVGMILILIFAEALALYGLIVGIILSSRA 160

[Close]

BLAST of HG10004639 vs. TAIR 10
Match: AT1G19910.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 53/151 (35.10%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 25  FSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 84
           F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 14  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 73

Query: 85  IILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS 144
           +I+ T +   + S       L  GYA  +SG+  G A L  G+ +GI+G +   ++AQ  
Sbjct: 74  VIISTGINPKAKSYY-----LFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQP 133

Query: 145 SLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
            LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 134 KLFVGMILILIFAEALALYGLIVGIILSSRA 159

The following BLAST results are available for this feature:

BLAST of HG10004639 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885623.1	1.3e-85	100.00	V-type proton ATPase subunit c''1 [Benincasa hispida]	[more]
XP_004138742.1	8.6e-85	98.90	V-type proton ATPase subunit c''1 [Cucumis sativus] >KGN62907.1 hypothetical pro...	[more]
XP_008445147.1	1.1e-84	98.35	PREDICTED: V-type proton ATPase subunit c''1 [Cucumis melo] >KAA0064963.1 V-type...	[more]
XP_022962488.1	9.6e-84	97.25	V-type proton ATPase subunit c''1-like [Cucurbita moschata] >XP_022996666.1 V-ty...	[more]
XP_023547273.1	4.7e-83	96.15	V-type proton ATPase subunit c''1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10004639 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZY7	5.3e-77	88.33	V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE...	[more]
Q9SLA2	1.3e-75	89.14	V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE...	[more]
P23968	3.7e-46	56.97	V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508...	[more]
Q91V37	3.5e-44	58.75	V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus OX=10090 GN=Atp6...	[more]
Q2TA24	5.9e-44	58.13	V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B...	[more]

BLAST of HG10004639 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ28	4.2e-85	98.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379870 PE=3 SV=1	[more]
A0A5A7V9W8	5.5e-85	98.35	V-type proton ATPase subunit c''1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A1S3BBZ9	5.5e-85	98.35	V-type proton ATPase subunit c''1 OS=Cucumis melo OX=3656 GN=LOC103488269 PE=3 S...	[more]
A0A6J1K5F4	4.6e-84	97.25	V-type proton ATPase subunit c''1-like OS=Cucurbita maxima OX=3661 GN=LOC1114918...	[more]
A0A6J1HEY2	4.6e-84	97.25	V-type proton ATPase subunit c''1-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]

BLAST of HG10004639 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32530.1	3.7e-78	88.33	ATPase, F0/V0 complex, subunit C protein	[more]
AT2G25610.1	9.2e-77	89.14	ATPase, F0/V0 complex, subunit C protein	[more]
AT4G32530.2	2.1e-73	75.71	ATPase, F0/V0 complex, subunit C protein	[more]
AT1G75630.1	1.4e-16	35.10	vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4	[more]
AT1G19910.1	1.4e-16	35.10	ATPase, F0/V0 complex, subunit C protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000245	V-ATPase proteolipid subunit	PRINTS	PR00122	VACATPASE	coord: 67..91 score: 34.11 coord: 123..149 score: 35.96 coord: 41..65 score: 23.26 coord: 150..173 score: 47.15
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 28..87 e-value: 1.1E-14 score: 54.5 coord: 112..171 e-value: 8.8E-10 score: 38.8
None	No IPR available	GENE3D	1.20.120.610		coord: 23..177 e-value: 3.6E-52 score: 178.0
None	No IPR available	PANTHER	PTHR10263:SF56	V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT	coord: 4..179
None	No IPR available	PANTHER	PTHR10263	V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT	coord: 4..179
None	No IPR available	CDD	cd18177	ATP-synt_Vo_c_ATP6F_rpt1	coord: 25..87 e-value: 9.44178E-26 score: 91.9403
None	No IPR available	CDD	cd18178	ATP-synt_Vo_c_ATP6F_rpt2	coord: 107..171 e-value: 8.57584E-25 score: 89.4883
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 104..172
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 21..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004639.1	HG10004639.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain
molecular_function	GO:0015078	proton transmembrane transporter activity