HG10004410 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10004410
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionNudix hydrolase 16
LocationChr08: 16709461 .. 16711585 (-)
RNA-Seq ExpressionHG10004410
SyntenyHG10004410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGATTTGGTGGCCCGCACTGGACGGCATCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTACATTCCCACCAATATATATATATATATTTTAAGTTTCGTAGACTTCAGCTATTTGATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATCTCTGTGTCTCTCCTAGCTTCTTAGTCGTTTTCGTGGACCATTCTTGTCGAAGTTTGGTGAAAAATGAGGCTGTCGTCATTGTCATTTACGTTTTTTTTTTTTTTTGACTACCTGATGGAAATTGACTGCTTTGATTTTCACTGTGGTTCTTGTTTGCATATTGGTGGTTGGTGATTTGTTGGTGGTGGGTTCTTTTATTGATTAGGGGTTTCGAGATGTTTGGATTTGGATCGGAGAATTTCTTGATATATGACGTGTAACACTGGGAATTTGATTGGTTGGTTTGGTGAGCCCTAATTTCTACGTTTCTGATACTGTTGCGCTTCAAACAATTTTGAAATCGGTAGTAATGTCATTGCGAAGATGAAGATAAATTACCACCTTCTTTCCAATTACCACAGAAGCTAAGGAAAATTTTAAAGATAGCAGGGGCATTAGCGATTTTACCTATGTTTTTCAAGTTGTTATTGTAGTGGATTCTTTGATTTTTTCTTTATGGACCATTATATTTCAGTGAGATCCAGTGGGGTCATTTAGGTCATGAGATACTAGGAATTTTTTAGTTTAGGTCTGCAGAATTTTTAGTTTTTCTCTCTTTTTAATCATCAGCGATTCAGACCTAAGAGTAGAAGTTCTGTCAGATTTGATTCGTGGTTGAGTATCTACAATATTAATTTGTCAAACAAAGTCCTTTGGTGATAACTTAGTGGTTGTTATGGTGGATGGGCGGCCAGATGATGGTTGGACTGGCACCAACCGGAAACAAGGAATCCAGGAAGTCTGTAATTTCTATACGCTGGAAACATGATGTGTCCTTTATATGGTAGCTGATTCAGGATTTTTGTGATTAGTGCATTGCCTTTTGGCTAAAGTGTATTGGATTCTTGATGACTTGATGCAAAGTTGGCCATTTATATGCGTCCCACAAAATAAAAAATAATTTCTTCCCTCTTTGTCCTGTCTTCACATTGTAGAAACGACGTTGAGAAATGTTGAGAATAAATCTGAATAACTGGAATAGCATCATGCTCTTTTATCCTTCTATTCTTTCTTATTGATAATAAGTGATGGCTCATTTGAAATTTATCTCAATTTCCCTTTTGCATTGCATTATATACTTTGGTGCTGCTCCTGTACATCTCCTATGATGCTGTATTTTATTCACAACTCATCATTCTCTCTTATACCTTTTTTTTTTTAAAAAAAAAATTAATTCTTAATACTTTCTTGTTGTTAATAAGTGATGCTTCACTTGAAATTTAACTCAGTTTCCCTTATGCATAGCGTTATATACTTCGGAGCTGCTCTTGTACATTGATCTTGTATATTGTTCACAATACATAAAGTTTTTATGTTTTATTTTAAATTTTGAAATGCAGTTGATGCCTGTATGATCACTTTCATGTCTAGCCATGAGGTTACCATATGATAGGAGTGCCTCGCCTGCATTATCTGTTGATGCTAATTTTGCTGTTCTTTTGTAGGTGTATTCCTTTTAGGTATAGAAGTTCCGATGGCAGTAGTGATGAAATTTCAGATAAAGAAGTGGAGGTGCTTATGATTGACACACCTAGTGGACCGGGCCTCTTGTTCCCAAAGGTATGAAACTATTCCCCTCCTCCATTAACTTTCACAGAACTTATTATTTATTTCAAAATGAGTTTGTTTAAAAAAAATCCAAAATGAGATTACATAGATTTGATTTGATTTTGACCGTATATATTATCTCATAGTTTGCAACGTTTTGTGTTGGGAACTTAAGGTTGAACTTCTGCTTTTTTGCTTCTCTCATATGAAGAAAGTATACAAGCTTATTTTATCTCTAACATCAGCATTTTCTCTAAAAGGGAGGCTGGGAGAATGACGAGACAGTGGAGGAGGCTGCTGTAAGGGAAGCTATTGAAGAAGCTGGTGTTCGTGGTGAACTTATGGTGAAATAG

mRNA sequence

ATGTCTGATTTGGTGGCCCGCACTGGACGGCATCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTATAGAAGTTCCGATGGCAGTAGTGATGAAATTTCAGATAAAGAAGTGGAGGTGCTTATGATTGACACACCTAGTGGACCGGGCCTCTTGTTCCCAAAGGGAGGCTGGGAGAATGACGAGACAGTGGAGGAGGCTGCTGTAAGGGAAGCTATTGAAGAAGCTGGTGTTCGTGGTGAACTTATGGTGAAATAG

Coding sequence (CDS)

ATGTCTGATTTGGTGGCCCGCACTGGACGGCATCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTATAGAAGTTCCGATGGCAGTAGTGATGAAATTTCAGATAAAGAAGTGGAGGTGCTTATGATTGACACACCTAGTGGACCGGGCCTCTTGTTCCCAAAGGGAGGCTGGGAGAATGACGAGACAGTGGAGGAGGCTGCTGTAAGGGAAGCTATTGAAGAAGCTGGTGTTCGTGGTGAACTTATGGTGAAATAG

Protein sequence

MSDLVARTGRHQQRYDAGCRLIAGYRSSDGSSDEISDKEVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAIEEAGVRGELMVK
Homology
BLAST of HG10004410 vs. NCBI nr
Match: XP_008445383.1 (PREDICTED: nudix hydrolase 16, mitochondrial isoform X1 [Cucumis melo] >KAA0064795.1 nudix hydrolase 16 [Cucumis melo var. makuwa])

HSP 1 Score: 164.1 bits (414), Expect = 5.5e-37
Identity = 84/90 (93.33%), Postives = 84/90 (93.33%), Query Frame = 0

Query: 1  MSDLVARTGRHQQRYDAGCRLIAG-----YRSSDGSSDEISDKEVEVLMIDTPSGPGLLF 60
          MSDLVARTGRHQQRYDAGCRLIAG     YRSSDGSSDEISDK VEVLMIDTPSGPGLLF
Sbjct: 1  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLF 60

Query: 61 PKGGWENDETVEEAAVREAIEEAGVRGELM 86
          PKGGWENDETVEEAAVREAIEEAGVRGELM
Sbjct: 61 PKGGWENDETVEEAAVREAIEEAGVRGELM 90

BLAST of HG10004410 vs. NCBI nr
Match: XP_038886652.1 (nudix hydrolase 16, mitochondrial isoform X2 [Benincasa hispida])

HSP 1 Score: 164.1 bits (414), Expect = 5.5e-37
Identity = 84/90 (93.33%), Postives = 84/90 (93.33%), Query Frame = 0

Query: 1  MSDLVARTGRHQQRYDAGCRLIAG-----YRSSDGSSDEISDKEVEVLMIDTPSGPGLLF 60
          MSDLVARTGRHQQRYDAGCRLIAG     YRSSDGSSDEISDK VEVLMIDTPSGPGLLF
Sbjct: 1  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLF 60

Query: 61 PKGGWENDETVEEAAVREAIEEAGVRGELM 86
          PKGGWENDETVEEAAVREAIEEAGVRGELM
Sbjct: 61 PKGGWENDETVEEAAVREAIEEAGVRGELM 90

BLAST of HG10004410 vs. NCBI nr
Match: XP_011657455.1 (nudix hydrolase 16, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 5.5e-37
Identity = 84/90 (93.33%), Postives = 84/90 (93.33%), Query Frame = 0

Query: 1  MSDLVARTGRHQQRYDAGCRLIAG-----YRSSDGSSDEISDKEVEVLMIDTPSGPGLLF 60
          MSDLVARTGRHQQRYDAGCRLIAG     YRSSDGSSDEISDK VEVLMIDTPSGPGLLF
Sbjct: 1  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLF 60

Query: 61 PKGGWENDETVEEAAVREAIEEAGVRGELM 86
          PKGGWENDETVEEAAVREAIEEAGVRGELM
Sbjct: 61 PKGGWENDETVEEAAVREAIEEAGVRGELM 90

BLAST of HG10004410 vs. NCBI nr
Match: XP_022961746.1 (nudix hydrolase 16, mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 162.9 bits (411), Expect = 1.2e-36
Identity = 83/90 (92.22%), Postives = 84/90 (93.33%), Query Frame = 0

Query: 1  MSDLVARTGRHQQRYDAGCRLIAG-----YRSSDGSSDEISDKEVEVLMIDTPSGPGLLF 60
          MSDLVARTGRHQQRYDAGCRLIAG     YRSSDGSSDEISDK VEVLMIDTPSGPGLLF
Sbjct: 1  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLF 60

Query: 61 PKGGWENDETVEEAAVREAIEEAGVRGELM 86
          PKGGWENDETVEEAAVREAIEEAGVRG+LM
Sbjct: 61 PKGGWENDETVEEAAVREAIEEAGVRGQLM 90

BLAST of HG10004410 vs. NCBI nr
Match: KAG6598656.1 (RNA pseudouridine synthase 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 162.5 bits (410), Expect = 1.6e-36
Identity = 82/90 (91.11%), Postives = 84/90 (93.33%), Query Frame = 0

Query: 1   MSDLVARTGRHQQRYDAGCRLIAG-----YRSSDGSSDEISDKEVEVLMIDTPSGPGLLF 60
           MSDLVARTGRHQQRYDAGCRLIAG     YRSSDGSSDE+SDK VEVLMIDTPSGPGLLF
Sbjct: 492 MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEVSDKVVEVLMIDTPSGPGLLF 551

Query: 61  PKGGWENDETVEEAAVREAIEEAGVRGELM 86
           PKGGWENDETVEEAAVREAIEEAGVRG+LM
Sbjct: 552 PKGGWENDETVEEAAVREAIEEAGVRGQLM 581

BLAST of HG10004410 vs. ExPASy Swiss-Prot
Match: Q9LHK1 (Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT16 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 5.0e-25
Identity = 60/90 (66.67%), Postives = 68/90 (75.56%), Query Frame = 0

Query: 1  MSDLVARTGRHQQRYDAGCRLIAG-----YRSSDGSSDEISDKEVEVLMIDTPSGPGLLF 60
          M DLVARTGR QQRY+ G RL+AG     Y +SD   +  S K ++VLMI + SGPGLLF
Sbjct: 1  MCDLVARTGRLQQRYEDGSRLVAGCIPFRYVNSDKDGNSESGKVIQVLMISSSSGPGLLF 60

Query: 61 PKGGWENDETVEEAAVREAIEEAGVRGELM 86
          PKGGWENDETV EAA REA+EEAGVRG LM
Sbjct: 61 PKGGWENDETVREAAAREAVEEAGVRGILM 90

BLAST of HG10004410 vs. ExPASy Swiss-Prot
Match: Q9LE73 (Nudix hydrolase 4 OS=Arabidopsis thaliana OX=3702 GN=NUDT4 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.5e-16
Identity = 46/88 (52.27%), Postives = 59/88 (67.05%), Query Frame = 0

Query: 4   LVARTGRHQQRYD-AGCRLIAG---YRSSDGSSDEISDKEVEVLMIDTPSGPGLLFPKGG 63
           LV+RTGR  QRYD AG R + G   YR      + +  + ++VL++    G G+LFPKGG
Sbjct: 43  LVSRTGRDLQRYDHAGYRQVVGCVPYRYKKQEVNGVETQVIQVLLVSAQKGKGMLFPKGG 102

Query: 64  WENDETVEEAAVREAIEEAGVRGELMVK 88
           WE DE++EEAA+RE IEEAGV GEL  K
Sbjct: 103 WETDESMEEAALRETIEEAGVTGELEEK 130

BLAST of HG10004410 vs. ExPASy Swiss-Prot
Match: Q52K88 (Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT13 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.9e-16
Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 0

Query: 1  MSDLVARTGRHQQRYDAGCRLIAG---YR-SSDGSSDEIS---DKEVEVLMIDTPSGPGL 60
          MS+L ARTGR  QRYD   RL++G   YR   D   D  S   + +++VLMI +P+   L
Sbjct: 1  MSNLSARTGRDHQRYDNNFRLVSGCIPYRLVKDEEEDSTSVDFENKLQVLMISSPNRHDL 60

Query: 61 LFPKGGWENDETVEEAAVREAIEEAGVRGEL 85
          +FPKGGWE+DETV EAA REA+EEAGV+G L
Sbjct: 61 VFPKGGWEDDETVLEAASREAMEEAGVKGIL 91

BLAST of HG10004410 vs. ExPASy Swiss-Prot
Match: Q9LQU5 (Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT18 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 9.4e-16
Identity = 47/84 (55.95%), Postives = 57/84 (67.86%), Query Frame = 0

Query: 4  LVARTGRHQQRYDAGCRLIAG---YRSSDGSSDEISDKEVEVLMIDTPSGPGLLFPKGGW 63
          LV+RTGR  QRY+ G R + G   YR    S   ISD E EVL+I +  G  L+FPKGGW
Sbjct: 4  LVSRTGRQSQRYNKGRRQVVGCIPYRLKISSDGTISD-EFEVLVISSQKGHALMFPKGGW 63

Query: 64 ENDETVEEAAVREAIEEAGVRGEL 85
          E DE+VEEAA RE++EEAGV G +
Sbjct: 64 ELDESVEEAASRESLEEAGVVGNV 86

BLAST of HG10004410 vs. ExPASy Swiss-Prot
Match: Q93ZY7 (Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT12 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.2e-15
Identity = 48/92 (52.17%), Postives = 60/92 (65.22%), Query Frame = 0

Query: 1  MSDLVARTGRHQQRYDAGCRLIAG---YRSSDGSSDEISD-----KEVEVLMIDTPSGPG 60
          MS L +RTGR +QRYD   RL++G   YR       E         ++EVLM+ +P+   
Sbjct: 1  MSVLSSRTGRDRQRYDNNFRLVSGCIPYRLMKADETEEDSGVDFVNKLEVLMVSSPNRHD 60

Query: 61 LLFPKGGWENDETVEEAAVREAIEEAGVRGEL 85
          L+FPKGGWE+DETV EAA REAIEEAGV+G L
Sbjct: 61 LVFPKGGWEDDETVLEAASREAIEEAGVKGIL 92

BLAST of HG10004410 vs. ExPASy TrEMBL
Match: A0A5A7VFY1 (Nudix hydrolase 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001020 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.6e-37
Identity = 84/90 (93.33%), Postives = 84/90 (93.33%), Query Frame = 0

Query: 1  MSDLVARTGRHQQRYDAGCRLIAG-----YRSSDGSSDEISDKEVEVLMIDTPSGPGLLF 60
          MSDLVARTGRHQQRYDAGCRLIAG     YRSSDGSSDEISDK VEVLMIDTPSGPGLLF
Sbjct: 1  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLF 60

Query: 61 PKGGWENDETVEEAAVREAIEEAGVRGELM 86
          PKGGWENDETVEEAAVREAIEEAGVRGELM
Sbjct: 61 PKGGWENDETVEEAAVREAIEEAGVRGELM 90

BLAST of HG10004410 vs. ExPASy TrEMBL
Match: A0A1S3BDF1 (nudix hydrolase 16, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488433 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.6e-37
Identity = 84/90 (93.33%), Postives = 84/90 (93.33%), Query Frame = 0

Query: 1  MSDLVARTGRHQQRYDAGCRLIAG-----YRSSDGSSDEISDKEVEVLMIDTPSGPGLLF 60
          MSDLVARTGRHQQRYDAGCRLIAG     YRSSDGSSDEISDK VEVLMIDTPSGPGLLF
Sbjct: 1  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLF 60

Query: 61 PKGGWENDETVEEAAVREAIEEAGVRGELM 86
          PKGGWENDETVEEAAVREAIEEAGVRGELM
Sbjct: 61 PKGGWENDETVEEAAVREAIEEAGVRGELM 90

BLAST of HG10004410 vs. ExPASy TrEMBL
Match: A0A6J1HB74 (nudix hydrolase 16, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462424 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 5.9e-37
Identity = 83/90 (92.22%), Postives = 84/90 (93.33%), Query Frame = 0

Query: 1  MSDLVARTGRHQQRYDAGCRLIAG-----YRSSDGSSDEISDKEVEVLMIDTPSGPGLLF 60
          MSDLVARTGRHQQRYDAGCRLIAG     YRSSDGSSDEISDK VEVLMIDTPSGPGLLF
Sbjct: 1  MSDLVARTGRHQQRYDAGCRLIAGCIPFRYRSSDGSSDEISDKVVEVLMIDTPSGPGLLF 60

Query: 61 PKGGWENDETVEEAAVREAIEEAGVRGELM 86
          PKGGWENDETVEEAAVREAIEEAGVRG+LM
Sbjct: 61 PKGGWENDETVEEAAVREAIEEAGVRGQLM 90

BLAST of HG10004410 vs. ExPASy TrEMBL
Match: A0A6J1K726 (nudix hydrolase 16, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492230 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.0e-36
Identity = 81/90 (90.00%), Postives = 84/90 (93.33%), Query Frame = 0

Query: 1  MSDLVARTGRHQQRYDAGCRLIAG-----YRSSDGSSDEISDKEVEVLMIDTPSGPGLLF 60
          MSDLVARTGRHQQRYDAGCRL+AG     YRSSDGSSDE+SDK VEVLMIDTPSGPGLLF
Sbjct: 1  MSDLVARTGRHQQRYDAGCRLVAGCIPFRYRSSDGSSDEVSDKVVEVLMIDTPSGPGLLF 60

Query: 61 PKGGWENDETVEEAAVREAIEEAGVRGELM 86
          PKGGWENDETVEEAAVREAIEEAGVRG+LM
Sbjct: 61 PKGGWENDETVEEAAVREAIEEAGVRGQLM 90

BLAST of HG10004410 vs. ExPASy TrEMBL
Match: A0A6J1KKB0 (nudix hydrolase 16, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111496053 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.5e-36
Identity = 81/90 (90.00%), Postives = 83/90 (92.22%), Query Frame = 0

Query: 1  MSDLVARTGRHQQRYDAGCRLIAG-----YRSSDGSSDEISDKEVEVLMIDTPSGPGLLF 60
          MSDLVARTGR QQRYDAGCRLIAG     YRSS+GSSDE+SDK VEVLMIDTPSGPGLLF
Sbjct: 1  MSDLVARTGRQQQRYDAGCRLIAGCIPFRYRSSEGSSDEVSDKVVEVLMIDTPSGPGLLF 60

Query: 61 PKGGWENDETVEEAAVREAIEEAGVRGELM 86
          PKGGWENDETVEEAAVREAIEEAGVRGELM
Sbjct: 61 PKGGWENDETVEEAAVREAIEEAGVRGELM 90

BLAST of HG10004410 vs. TAIR 10
Match: AT3G12600.1 (nudix hydrolase homolog 16 )

HSP 1 Score: 114.8 bits (286), Expect = 3.5e-26
Identity = 60/90 (66.67%), Postives = 68/90 (75.56%), Query Frame = 0

Query: 1  MSDLVARTGRHQQRYDAGCRLIAG-----YRSSDGSSDEISDKEVEVLMIDTPSGPGLLF 60
          M DLVARTGR QQRY+ G RL+AG     Y +SD   +  S K ++VLMI + SGPGLLF
Sbjct: 1  MCDLVARTGRLQQRYEDGSRLVAGCIPFRYVNSDKDGNSESGKVIQVLMISSSSGPGLLF 60

Query: 61 PKGGWENDETVEEAAVREAIEEAGVRGELM 86
          PKGGWENDETV EAA REA+EEAGVRG LM
Sbjct: 61 PKGGWENDETVREAAAREAVEEAGVRGILM 90

BLAST of HG10004410 vs. TAIR 10
Match: AT3G12600.2 (nudix hydrolase homolog 16 )

HSP 1 Score: 97.8 bits (242), Expect = 4.5e-21
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 0

Query: 12 QQRYDAGCRLIAG-----YRSSDGSSDEISDKEVEVLMIDTPSGPGLLFPKGGWENDETV 71
          +QRY+ G RL+AG     Y +SD   +  S K ++VLMI + SGPGLLFPKGGWENDETV
Sbjct: 3  EQRYEDGSRLVAGCIPFRYVNSDKDGNSESGKVIQVLMISSSSGPGLLFPKGGWENDETV 62

Query: 72 EEAAVREAIEEAGVRGELM 86
           EAA REA+EEAGVRG LM
Sbjct: 63 REAAAREAVEEAGVRGILM 81

BLAST of HG10004410 vs. TAIR 10
Match: AT1G18300.1 (nudix hydrolase homolog 4 )

HSP 1 Score: 86.7 bits (213), Expect = 1.0e-17
Identity = 46/88 (52.27%), Postives = 59/88 (67.05%), Query Frame = 0

Query: 4   LVARTGRHQQRYD-AGCRLIAG---YRSSDGSSDEISDKEVEVLMIDTPSGPGLLFPKGG 63
           LV+RTGR  QRYD AG R + G   YR      + +  + ++VL++    G G+LFPKGG
Sbjct: 43  LVSRTGRDLQRYDHAGYRQVVGCVPYRYKKQEVNGVETQVIQVLLVSAQKGKGMLFPKGG 102

Query: 64  WENDETVEEAAVREAIEEAGVRGELMVK 88
           WE DE++EEAA+RE IEEAGV GEL  K
Sbjct: 103 WETDESMEEAALRETIEEAGVTGELEEK 130

BLAST of HG10004410 vs. TAIR 10
Match: AT3G26690.1 (nudix hydrolase homolog 13 )

HSP 1 Score: 86.3 bits (212), Expect = 1.4e-17
Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 0

Query: 1  MSDLVARTGRHQQRYDAGCRLIAG---YR-SSDGSSDEIS---DKEVEVLMIDTPSGPGL 60
          MS+L ARTGR  QRYD   RL++G   YR   D   D  S   + +++VLMI +P+   L
Sbjct: 1  MSNLSARTGRDHQRYDNNFRLVSGCIPYRLVKDEEEDSTSVDFENKLQVLMISSPNRHDL 60

Query: 61 LFPKGGWENDETVEEAAVREAIEEAGVRGEL 85
          +FPKGGWE+DETV EAA REA+EEAGV+G L
Sbjct: 61 VFPKGGWEDDETVLEAASREAMEEAGVKGIL 91

BLAST of HG10004410 vs. TAIR 10
Match: AT3G26690.2 (nudix hydrolase homolog 13 )

HSP 1 Score: 86.3 bits (212), Expect = 1.4e-17
Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 0

Query: 1  MSDLVARTGRHQQRYDAGCRLIAG---YR-SSDGSSDEIS---DKEVEVLMIDTPSGPGL 60
          MS+L ARTGR  QRYD   RL++G   YR   D   D  S   + +++VLMI +P+   L
Sbjct: 1  MSNLSARTGRDHQRYDNNFRLVSGCIPYRLVKDEEEDSTSVDFENKLQVLMISSPNRHDL 60

Query: 61 LFPKGGWENDETVEEAAVREAIEEAGVRGEL 85
          +FPKGGWE+DETV EAA REA+EEAGV+G L
Sbjct: 61 VFPKGGWEDDETVLEAASREAMEEAGVKGIL 91

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008445383.15.5e-3793.33PREDICTED: nudix hydrolase 16, mitochondrial isoform X1 [Cucumis melo] >KAA00647... [more]
XP_038886652.15.5e-3793.33nudix hydrolase 16, mitochondrial isoform X2 [Benincasa hispida][more]
XP_011657455.15.5e-3793.33nudix hydrolase 16, mitochondrial isoform X2 [Cucumis sativus][more]
XP_022961746.11.2e-3692.22nudix hydrolase 16, mitochondrial-like isoform X1 [Cucurbita moschata][more]
KAG6598656.11.6e-3691.11RNA pseudouridine synthase 3, mitochondrial, partial [Cucurbita argyrosperma sub... [more]
Match NameE-valueIdentityDescription
Q9LHK15.0e-2566.67Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT16 PE=2... [more]
Q9LE731.5e-1652.27Nudix hydrolase 4 OS=Arabidopsis thaliana OX=3702 GN=NUDT4 PE=1 SV=1[more]
Q52K881.9e-1654.95Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT13 PE=1... [more]
Q9LQU59.4e-1655.95Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT18 PE=2... [more]
Q93ZY71.2e-1552.17Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT12 PE=2... [more]
Match NameE-valueIdentityDescription
A0A5A7VFY12.6e-3793.33Nudix hydrolase 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00... [more]
A0A1S3BDF12.6e-3793.33nudix hydrolase 16, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348... [more]
A0A6J1HB745.9e-3792.22nudix hydrolase 16, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1K7261.0e-3690.00nudix hydrolase 16, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN... [more]
A0A6J1KKB08.5e-3690.00nudix hydrolase 16, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC1114960... [more]
Match NameE-valueIdentityDescription
AT3G12600.13.5e-2666.67nudix hydrolase homolog 16 [more]
AT3G12600.24.5e-2163.29nudix hydrolase homolog 16 [more]
AT1G18300.11.0e-1752.27nudix hydrolase homolog 4 [more]
AT3G26690.11.4e-1754.95nudix hydrolase homolog 13 [more]
AT3G26690.21.4e-1754.95nudix hydrolase homolog 13 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.79.10Nucleoside Triphosphate Pyrophosphohydrolasecoord: 9..87
e-value: 3.5E-14
score: 54.9
NoneNo IPR availablePANTHERPTHR12629:SF63OS03G0810300 PROTEINcoord: 1..85
NoneNo IPR availablePANTHERPTHR12629DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASEcoord: 1..85
IPR000086NUDIX hydrolase domainPFAMPF00293NUDIXcoord: 38..83
e-value: 3.3E-9
score: 36.9
IPR000086NUDIX hydrolase domainPROSITEPS51462NUDIXcoord: 12..87
score: 9.018152
IPR020084NUDIX hydrolase, conserved sitePROSITEPS00893NUDIX_BOXcoord: 58..79
IPR015797NUDIX hydrolase-like domain superfamilySUPERFAMILY55811Nudixcoord: 41..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10004410.1HG10004410.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0016787 hydrolase activity