HG10004410 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGATTTGGTGGCCCGCACTGGACGGCATCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTACATTCCCACCAATATATATATATATATTTTAAGTTTCGTAGACTTCAGCTATTTGATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATCTCTGTGTCTCTCCTAGCTTCTTAGTCGTTTTCGTGGACCATTCTTGTCGAAGTTTGGTGAAAAATGAGGCTGTCGTCATTGTCATTTACGTTTTTTTTTTTTTTTGACTACCTGATGGAAATTGACTGCTTTGATTTTCACTGTGGTTCTTGTTTGCATATTGGTGGTTGGTGATTTGTTGGTGGTGGGTTCTTTTATTGATTAGGGGTTTCGAGATGTTTGGATTTGGATCGGAGAATTTCTTGATATATGACGTGTAACACTGGGAATTTGATTGGTTGGTTTGGTGAGCCCTAATTTCTACGTTTCTGATACTGTTGCGCTTCAAACAATTTTGAAATCGGTAGTAATGTCATTGCGAAGATGAAGATAAATTACCACCTTCTTTCCAATTACCACAGAAGCTAAGGAAAATTTTAAAGATAGCAGGGGCATTAGCGATTTTACCTATGTTTTTCAAGTTGTTATTGTAGTGGATTCTTTGATTTTTTCTTTATGGACCATTATATTTCAGTGAGATCCAGTGGGGTCATTTAGGTCATGAGATACTAGGAATTTTTTAGTTTAGGTCTGCAGAATTTTTAGTTTTTCTCTCTTTTTAATCATCAGCGATTCAGACCTAAGAGTAGAAGTTCTGTCAGATTTGATTCGTGGTTGAGTATCTACAATATTAATTTGTCAAACAAAGTCCTTTGGTGATAACTTAGTGGTTGTTATGGTGGATGGGCGGCCAGATGATGGTTGGACTGGCACCAACCGGAAACAAGGAATCCAGGAAGTCTGTAATTTCTATACGCTGGAAACATGATGTGTCCTTTATATGGTAGCTGATTCAGGATTTTTGTGATTAGTGCATTGCCTTTTGGCTAAAGTGTATTGGATTCTTGATGACTTGATGCAAAGTTGGCCATTTATATGCGTCCCACAAAATAAAAAATAATTTCTTCCCTCTTTGTCCTGTCTTCACATTGTAGAAACGACGTTGAGAAATGTTGAGAATAAATCTGAATAACTGGAATAGCATCATGCTCTTTTATCCTTCTATTCTTTCTTATTGATAATAAGTGATGGCTCATTTGAAATTTATCTCAATTTCCCTTTTGCATTGCATTATATACTTTGGTGCTGCTCCTGTACATCTCCTATGATGCTGTATTTTATTCACAACTCATCATTCTCTCTTATACCTTTTTTTTTTTAAAAAAAAAATTAATTCTTAATACTTTCTTGTTGTTAATAAGTGATGCTTCACTTGAAATTTAACTCAGTTTCCCTTATGCATAGCGTTATATACTTCGGAGCTGCTCTTGTACATTGATCTTGTATATTGTTCACAATACATAAAGTTTTTATGTTTTATTTTAAATTTTGAAATGCAGTTGATGCCTGTATGATCACTTTCATGTCTAGCCATGAGGTTACCATATGATAGGAGTGCCTCGCCTGCATTATCTGTTGATGCTAATTTTGCTGTTCTTTTGTAGGTGTATTCCTTTTAGGTATAGAAGTTCCGATGGCAGTAGTGATGAAATTTCAGATAAAGAAGTGGAGGTGCTTATGATTGACACACCTAGTGGACCGGGCCTCTTGTTCCCAAAGGTATGAAACTATTCCCCTCCTCCATTAACTTTCACAGAACTTATTATTTATTTCAAAATGAGTTTGTTTAAAAAAAATCCAAAATGAGATTACATAGATTTGATTTGATTTTGACCGTATATATTATCTCATAGTTTGCAACGTTTTGTGTTGGGAACTTAAGGTTGAACTTCTGCTTTTTTGCTTCTCTCATATGAAGAAAGTATACAAGCTTATTTTATCTCTAACATCAGCATTTTCTCTAAAAGGGAGGCTGGGAGAATGACGAGACAGTGGAGGAGGCTGCTGTAAGGGAAGCTATTGAAGAAGCTGGTGTTCGTGGTGAACTTATGGTGAAATAG ATGTCTGATTTGGTGGCCCGCACTGGACGGCATCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTATAGAAGTTCCGATGGCAGTAGTGATGAAATTTCAGATAAAGAAGTGGAGGTGCTTATGATTGACACACCTAGTGGACCGGGCCTCTTGTTCCCAAAGGGAGGCTGGGAGAATGACGAGACAGTGGAGGAGGCTGCTGTAAGGGAAGCTATTGAAGAAGCTGGTGTTCGTGGTGAACTTATGGTGAAATAG ATGTCTGATTTGGTGGCCCGCACTGGACGGCATCAGCAGCGGTACGATGCCGGTTGTCGCCTTATTGCTGGGTATAGAAGTTCCGATGGCAGTAGTGATGAAATTTCAGATAAAGAAGTGGAGGTGCTTATGATTGACACACCTAGTGGACCGGGCCTCTTGTTCCCAAAGGGAGGCTGGGAGAATGACGAGACAGTGGAGGAGGCTGCTGTAAGGGAAGCTATTGAAGAAGCTGGTGTTCGTGGTGAACTTATGGTGAAATAG MSDLVARTGRHQQRYDAGCRLIAGYRSSDGSSDEISDKEVEVLMIDTPSGPGLLFPKGGWENDETVEEAAVREAIEEAGVRGELMVK Homology
BLAST of HG10004410 vs. NCBI nr
Match: XP_008445383.1 (PREDICTED: nudix hydrolase 16, mitochondrial isoform X1 [Cucumis melo] >KAA0064795.1 nudix hydrolase 16 [Cucumis melo var. makuwa]) HSP 1 Score: 164.1 bits (414), Expect = 5.5e-37 Identity = 84/90 (93.33%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of HG10004410 vs. NCBI nr
Match: XP_038886652.1 (nudix hydrolase 16, mitochondrial isoform X2 [Benincasa hispida]) HSP 1 Score: 164.1 bits (414), Expect = 5.5e-37 Identity = 84/90 (93.33%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of HG10004410 vs. NCBI nr
Match: XP_011657455.1 (nudix hydrolase 16, mitochondrial isoform X2 [Cucumis sativus]) HSP 1 Score: 164.1 bits (414), Expect = 5.5e-37 Identity = 84/90 (93.33%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of HG10004410 vs. NCBI nr
Match: XP_022961746.1 (nudix hydrolase 16, mitochondrial-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 162.9 bits (411), Expect = 1.2e-36 Identity = 83/90 (92.22%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of HG10004410 vs. NCBI nr
Match: KAG6598656.1 (RNA pseudouridine synthase 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 162.5 bits (410), Expect = 1.6e-36 Identity = 82/90 (91.11%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of HG10004410 vs. ExPASy Swiss-Prot
Match: Q9LHK1 (Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT16 PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 5.0e-25 Identity = 60/90 (66.67%), Postives = 68/90 (75.56%), Query Frame = 0
BLAST of HG10004410 vs. ExPASy Swiss-Prot
Match: Q9LE73 (Nudix hydrolase 4 OS=Arabidopsis thaliana OX=3702 GN=NUDT4 PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.5e-16 Identity = 46/88 (52.27%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of HG10004410 vs. ExPASy Swiss-Prot
Match: Q52K88 (Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT13 PE=1 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 1.9e-16 Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 0
BLAST of HG10004410 vs. ExPASy Swiss-Prot
Match: Q9LQU5 (Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT18 PE=2 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 9.4e-16 Identity = 47/84 (55.95%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of HG10004410 vs. ExPASy Swiss-Prot
Match: Q93ZY7 (Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT12 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.2e-15 Identity = 48/92 (52.17%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of HG10004410 vs. ExPASy TrEMBL
Match: A0A5A7VFY1 (Nudix hydrolase 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001020 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 2.6e-37 Identity = 84/90 (93.33%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of HG10004410 vs. ExPASy TrEMBL
Match: A0A1S3BDF1 (nudix hydrolase 16, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488433 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 2.6e-37 Identity = 84/90 (93.33%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of HG10004410 vs. ExPASy TrEMBL
Match: A0A6J1HB74 (nudix hydrolase 16, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462424 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 5.9e-37 Identity = 83/90 (92.22%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of HG10004410 vs. ExPASy TrEMBL
Match: A0A6J1K726 (nudix hydrolase 16, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492230 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.0e-36 Identity = 81/90 (90.00%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of HG10004410 vs. ExPASy TrEMBL
Match: A0A6J1KKB0 (nudix hydrolase 16, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111496053 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 8.5e-36 Identity = 81/90 (90.00%), Postives = 83/90 (92.22%), Query Frame = 0
BLAST of HG10004410 vs. TAIR 10
Match: AT3G12600.1 (nudix hydrolase homolog 16 ) HSP 1 Score: 114.8 bits (286), Expect = 3.5e-26 Identity = 60/90 (66.67%), Postives = 68/90 (75.56%), Query Frame = 0
BLAST of HG10004410 vs. TAIR 10
Match: AT3G12600.2 (nudix hydrolase homolog 16 ) HSP 1 Score: 97.8 bits (242), Expect = 4.5e-21 Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 0
BLAST of HG10004410 vs. TAIR 10
Match: AT1G18300.1 (nudix hydrolase homolog 4 ) HSP 1 Score: 86.7 bits (213), Expect = 1.0e-17 Identity = 46/88 (52.27%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of HG10004410 vs. TAIR 10
Match: AT3G26690.1 (nudix hydrolase homolog 13 ) HSP 1 Score: 86.3 bits (212), Expect = 1.4e-17 Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 0
BLAST of HG10004410 vs. TAIR 10
Match: AT3G26690.2 (nudix hydrolase homolog 13 ) HSP 1 Score: 86.3 bits (212), Expect = 1.4e-17 Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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