HG10004404 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10004404
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionThioredoxin
LocationChr08: 16660895 .. 16663332 (+)
RNA-Seq ExpressionHG10004404
SyntenyHG10004404
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATCTGCCGAAGTGCAGGAGTTGGTGAAGGGGGAAAGAAATGTGCCGCTTATAATTGATTTTTATGCAACATGGTGTGGACCCTGCATTCTAATGGCTCAAGAACTTGAAATGGTATGTCTAATTACATTGAATTTTGGTATGAATTCACATGTAAATGGTGATTCTTTGCCAGAGAGGTGTGTAAATGCTTCATTTTTATGTATGTATGGATCTATTAGCTTAAGGTTTTGGATTTAGTGGGGGTTAAAAATGATATCAGTATATCAGTAGCTCTTGAGTTCAAACTATAAGTTAGAGGGAGCTATATATGTATTTGTGTAAGAGATCAAAGATACCGACTCATCTGGCTTTTGCTTTTGGGGTTAGTGTTAGTGGTAGAATTAATGTATGAATCTCATTTAATTGTAATTTCAAACTCAAAGCCTTATCTAGTATAGTTCACATTTCTCCTTTTAGTTTTGACGGGGATGTGCTTCCATATGGTTCTGGTGAAGAAGAAAATTTACATGATGTGTTGAGGCCAAAAGGCATTGATTAAGAACTTCAAGTTTTATATATATCTATATGAAAACTACCGCAGTTAGTTTGGCTTATTGTAGTATTCTTGTGATTTGGGCTATTCATTTACTTGGTTCTGTAACATAGTGGTTGGTGTCTTATGGTGGTCTGGCCATTGTATCTTTTGGTAGTATATTTACTCCCATCCTGCTGTCTTACAGTCTGTTGAGAGGGAAATTCCTTGTTCATACAATTAGTTGATCTTCGTTCCTGCTAATTCTCACAGGTGGAGAGTTAGTTTCTATTTGGAATAATTGGGGTAGTTGATTATTAAGCCTGCTTGTTGCAGAATCAAATCATTGTCTGTAGTCTTAATTTGTCACAAAAACTTGTGGTTTTAGTAGATGTGAGTGTTAAGCGATATTTACGTGCTTGTAATCACAAAGAAGGCTTGCCTTTTTCTGTGTGCATGTTTGTACTTTTCTTTGATCAAGACACTGTGAGATGACAAAGGAACTGAGAGGTCAATGCTGCATCTTGGTTGCATATGCATTTCATGCCCTGTAACATACTTGGATTGGCGATAAGATTGTAGTTCTTAACTTGCTTCAGCAAAGTTGGAATCGATTGGATAATTCTTTTGCATCTTTTTGTTTATTTATTTATTTGTAGTCACTGGATAAAAGTTGTGGTTTGCTCAAGCAAAATTCTTTATGGACCCACCAATCGTGAATACCAACCATGGGAAGGGTAAGAAGGGGATTTTTCAAAGGACAGTCAGTTAGCAGGACATCTTTGTAAGGAATGTGGGGAATAGGACAGTGTTACCAGTGAAAGCAATGTTTTGGGAGGGGATCATTGTTATTTTGGGAATTGTGATGTTATGGAGAGAGGTTACTAGCCCTCTCGAAAATTAGCTGGATATTTTATTGTGTTCTCAGCATATACTTTCCGTTGTCTCGTTGGTGATACTGTTCTAACGCTAGCATTGGAATATGTTTTGAACTTTAAGTGATTGTTCAGAATGTTTGTTATATCTTTTGCTCCAACTAAAGGAACACTACAATTTTCTGGGTTGTTCAGAAACATTACGATGATCTTTTAGACGTCATGTTGGTTCTATTTTGCTCTTTCAGGATTGCAATTACACCTTCTTCCAGTTTTAGTTCAGGTAGTTGATATTGTTATTGAAATGGCAATGAATATTAAGCTGCACTATTTCCTTGTGCTACTATTGTTTGCACGGTTGCGTTCGAGGTTTTACTATACTTGTACTATTGATTTTCGTTAATGAAGGCTTTGGTTTTACTATTAGATTTGTTATGGTCAACGTTCTCTTCAGCCCCTGCATCAATTGCCATAGTATTCAAAATTTGCATTGCTACATGGATCTGTTAATAATTGATGACTTGTAAAAAGAATTTGTTTGCTTAAAATGTTGACGCTCTAGTCAATTGCTCAGTTCATGGTATTATCTATATTAACTATGATCATAGATTAACATTTGGAGTCGTTGGATGAAGCTGTAAGTCTGTAACTGTAATGTGCTGTTACAACTCTTTTATTTTGGAAATATGCAATGATCATCAAGGTTGATACAGACGACGAATATGAATTTTCACGCGATATGCAGGTAAAAACACACCACTCCTTTCTCCCTAACCTATTCGCCTCGTCTCTATACTGCAATGTTGTCCTAACACAAAGCATTCTCATCTACACACCTTTTCGATTATCCGCAAAGTTGGTCGTGAAAGATAGTCTTTGTTCTTACCCATATCTCTGGAAAGGTGAATCTGAGTTAAATGCGGTTTCAGGTGAGAGGACTGCCTACACTTTTCTTCATTAGCCCGGATCCAAATAAAGAAGCTATCCGCACCGAAGGTCTCATTCCAATTCAGATGATGCGAGATATCATCGATAAAGAGATGTGA

mRNA sequence

ATGACATCTGCCGAAGTGCAGGAGTTGGTGAAGGGGGAAAGAAATGTGCCGCTTATAATTGATTTTTATGCAACATGGTGTGGACCCTGCATTCTAATGGCTCAAGAACTTGAAATGGTGAGAGGACTGCCTACACTTTTCTTCATTAGCCCGGATCCAAATAAAGAAGCTATCCGCACCGAAGGTCTCATTCCAATTCAGATGATGCGAGATATCATCGATAAAGAGATGTGA

Coding sequence (CDS)

ATGACATCTGCCGAAGTGCAGGAGTTGGTGAAGGGGGAAAGAAATGTGCCGCTTATAATTGATTTTTATGCAACATGGTGTGGACCCTGCATTCTAATGGCTCAAGAACTTGAAATGGTGAGAGGACTGCCTACACTTTTCTTCATTAGCCCGGATCCAAATAAAGAAGCTATCCGCACCGAAGGTCTCATTCCAATTCAGATGATGCGAGATATCATCGATAAAGAGATGTGA

Protein sequence

MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEMVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM
Homology
[Close]
BLAST of HG10004404 vs. NCBI nr
Match: EOY19739.1 (Thioredoxin z, P,TRX z isoform 2 [Theobroma cacao])

HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32
Identity = 68/77 (88.31%), Postives = 75/77 (97.40%), Query Frame = 0 

Query: 1   MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEMVRGLPTLFFISPDPNKEAIRT 60
           M++ EV+ELV+GER+VP+IIDFYATWCGPCILMAQELEMVRGLPTLFFISPDPNKEAIRT
Sbjct: 70  MSAQEVEELVRGERSVPIIIDFYATWCGPCILMAQELEMVRGLPTLFFISPDPNKEAIRT 129

Query: 61  EGLIPIQMMRDIIDKEM 78
           EGLIPIQMMRDI+D EM
Sbjct: 130 EGLIPIQMMRDILDNEM 146

[Close]
BLAST of HG10004404 vs. NCBI nr
Match: XP_038884365.1 (thioredoxin-like protein CITRX, chloroplastic [Benincasa hispida])

HSP 1 Score: 146.0 bits (367), Expect = 1.4e-31
Identity = 76/104 (73.08%), Postives = 77/104 (74.04%), Query Frame = 0 

Query: 1   MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM--------------------- 60
           MT+AEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM                     
Sbjct: 81  MTAAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIVKVDTDDEYE 140

Query: 61  ------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM 78
                 VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM
Sbjct: 141 FSRDMQVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM 184

[Close]
BLAST of HG10004404 vs. NCBI nr
Match: XP_004146769.1 (thioredoxin-like protein CITRX, chloroplastic [Cucumis sativus] >KGN47767.1 hypothetical protein Csa_003304 [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 3.0e-31
Identity = 75/104 (72.12%), Postives = 77/104 (74.04%), Query Frame = 0 

Query: 1   MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM--------------------- 60
           MT+AEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM                     
Sbjct: 80  MTAAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVDTDDEYE 139

Query: 61  ------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM 78
                 VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIID+EM
Sbjct: 140 FSRDMQVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDREM 183

[Close]
BLAST of HG10004404 vs. NCBI nr
Match: KAA0064789.1 (thioredoxin-like protein CITRX [Cucumis melo var. makuwa])

HSP 1 Score: 144.1 bits (362), Expect = 5.2e-31
Identity = 75/104 (72.12%), Postives = 76/104 (73.08%), Query Frame = 0 

Query: 1   MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM--------------------- 60
           MT+AEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM                     
Sbjct: 80  MTAAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVDTDDEYE 139

Query: 61  ------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM 78
                 VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIID EM
Sbjct: 140 FSRDMQVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 183

[Close]
BLAST of HG10004404 vs. NCBI nr
Match: XP_022131323.1 (thioredoxin-like protein CITRX, chloroplastic [Momordica charantia])

HSP 1 Score: 144.1 bits (362), Expect = 5.2e-31
Identity = 75/104 (72.12%), Postives = 77/104 (74.04%), Query Frame = 0 

Query: 1   MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM--------------------- 60
           MT+AEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM                     
Sbjct: 80  MTAAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVDTDDEYE 139

Query: 61  ------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM 78
                 VRGLPTLFFISPDP+KEAIRTEGLIPIQMMRDIIDKEM
Sbjct: 140 FSRDMQVRGLPTLFFISPDPSKEAIRTEGLIPIQMMRDIIDKEM 183

[Close]
BLAST of HG10004404 vs. ExPASy Swiss-Prot
Match: Q6JE38 (Thioredoxin-like protein CITRX1, chloroplastic OS=Nicotiana benthamiana OX=4100 GN=CITRX1 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 7.8e-30
Identity = 64/104 (61.54%), Postives = 75/104 (72.12%), Query Frame = 0 

Query: 1   MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM--------------------- 60
           +++ ++QEL+KGERNVPLIIDFYATWCGPCILMAQELEM                     
Sbjct: 78  VSAKDIQELIKGERNVPLIIDFYATWCGPCILMAQELEMLAVEYESNALIVKVDADDEYE 137

Query: 61  ------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM 78
                 VRGLPTL+FISPDPNK+AIRTEGLIPIQMMRDII+ ++
Sbjct: 138 FARDMQVRGLPTLYFISPDPNKDAIRTEGLIPIQMMRDIINNDL 181

[Close]
BLAST of HG10004404 vs. ExPASy Swiss-Prot
Match: Q6JE37 (Thioredoxin-like protein CITRX2, chloroplastic OS=Nicotiana benthamiana OX=4100 GN=CITRX2 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 7.8e-30
Identity = 64/104 (61.54%), Postives = 75/104 (72.12%), Query Frame = 0 

Query: 1   MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM--------------------- 60
           +++ ++QEL+KGERNVPLIIDFYATWCGPCILMAQELEM                     
Sbjct: 78  VSAKDIQELIKGERNVPLIIDFYATWCGPCILMAQELEMLAVEYESNALIVKVDTDDEYE 137

Query: 61  ------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM 78
                 VRGLPTL+FISPDPNK+AIRTEGLIPIQMMRDII+ ++
Sbjct: 138 FARDMQVRGLPTLYFISPDPNKDAIRTEGLIPIQMMRDIINNDL 181

[Close]
BLAST of HG10004404 vs. ExPASy Swiss-Prot
Match: Q9LKW0 (Thioredoxin-like protein CITRX, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CITRX PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.3e-29
Identity = 64/104 (61.54%), Postives = 74/104 (71.15%), Query Frame = 0 

Query: 1   MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM--------------------- 60
           +++ E+QEL+KGERNVPLIIDFYATWCGPCILMAQELEM                     
Sbjct: 72  LSAKEIQELIKGERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNALIVKVDTDDEYE 131

Query: 61  ------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM 78
                 VRGLPTL+FISPD +K+AIRTEGLIPIQMMRDIID ++
Sbjct: 132 FARDMQVRGLPTLYFISPDSSKDAIRTEGLIPIQMMRDIIDNDL 175

[Close]
BLAST of HG10004404 vs. ExPASy Swiss-Prot
Match: Q9M7X9 (Thioredoxin-like protein CITRX, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CITRX PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 3.0e-29
Identity = 64/104 (61.54%), Postives = 73/104 (70.19%), Query Frame = 0 

Query: 1   MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM--------------------- 60
           +++ E+QELVKG+R VPLI+DFYATWCGPCILMAQELEM                     
Sbjct: 80  LSAQELQELVKGDRKVPLIVDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDDEYE 139

Query: 61  ------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM 78
                 VRGLPTLFFISPDP+K+AIRTEGLIP+QMM DIID EM
Sbjct: 140 FARDMQVRGLPTLFFISPDPSKDAIRTEGLIPLQMMHDIIDNEM 183

[Close]
BLAST of HG10004404 vs. ExPASy Swiss-Prot
Match: M1A3D5 (Thioredoxin-like protein CITRX, chloroplastic OS=Solanum tuberosum OX=4113 GN=CITRX PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 8.6e-29
Identity = 63/104 (60.58%), Postives = 74/104 (71.15%), Query Frame = 0 

Query: 1   MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM--------------------- 60
           +++ E+QEL+KGERNVPLIIDFYATWCGPCILMAQELEM                     
Sbjct: 72  LSAKEIQELIKGERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNALIVKVDTDDEYE 131

Query: 61  ------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM 78
                 VRGLPTL+FISPD +K+AIRTEGLIPIQMMRDII+ ++
Sbjct: 132 FARDMQVRGLPTLYFISPDSSKDAIRTEGLIPIQMMRDIINNDL 175

[Close]
BLAST of HG10004404 vs. ExPASy TrEMBL
Match: A0A061FY75 (Thioredoxin z, P,TRX z isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_045045 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 6.0e-33
Identity = 68/77 (88.31%), Postives = 75/77 (97.40%), Query Frame = 0 

Query: 1   MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEMVRGLPTLFFISPDPNKEAIRT 60
           M++ EV+ELV+GER+VP+IIDFYATWCGPCILMAQELEMVRGLPTLFFISPDPNKEAIRT
Sbjct: 70  MSAQEVEELVRGERSVPIIIDFYATWCGPCILMAQELEMVRGLPTLFFISPDPNKEAIRT 129

Query: 61  EGLIPIQMMRDIIDKEM 78
           EGLIPIQMMRDI+D EM
Sbjct: 130 EGLIPIQMMRDILDNEM 146

[Close]
BLAST of HG10004404 vs. ExPASy TrEMBL
Match: A0A0A0KH97 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G401380 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-31
Identity = 75/104 (72.12%), Postives = 77/104 (74.04%), Query Frame = 0 

Query: 1   MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM--------------------- 60
           MT+AEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM                     
Sbjct: 80  MTAAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVDTDDEYE 139

Query: 61  ------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM 78
                 VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIID+EM
Sbjct: 140 FSRDMQVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDREM 183

[Close]
BLAST of HG10004404 vs. ExPASy TrEMBL
Match: A0A5A7VH45 (Thioredoxin-like protein CITRX OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00960 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.5e-31
Identity = 75/104 (72.12%), Postives = 76/104 (73.08%), Query Frame = 0 

Query: 1   MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM--------------------- 60
           MT+AEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM                     
Sbjct: 80  MTAAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVDTDDEYE 139

Query: 61  ------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM 78
                 VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIID EM
Sbjct: 140 FSRDMQVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 183

[Close]
BLAST of HG10004404 vs. ExPASy TrEMBL
Match: A0A6J1BT12 (thioredoxin-like protein CITRX, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111004581 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.5e-31
Identity = 75/104 (72.12%), Postives = 77/104 (74.04%), Query Frame = 0 

Query: 1   MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM--------------------- 60
           MT+AEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM                     
Sbjct: 80  MTAAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVDTDDEYE 139

Query: 61  ------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM 78
                 VRGLPTLFFISPDP+KEAIRTEGLIPIQMMRDIIDKEM
Sbjct: 140 FSRDMQVRGLPTLFFISPDPSKEAIRTEGLIPIQMMRDIIDKEM 183

[Close]
BLAST of HG10004404 vs. ExPASy TrEMBL
Match: A0A1S3BCN5 (thioredoxin-like protein CITRX, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488444 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.1e-30
Identity = 74/104 (71.15%), Postives = 75/104 (72.12%), Query Frame = 0 

Query: 1   MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM--------------------- 60
           MT+AEVQELVK ERNVPLIIDFYATWCGPCILMAQELEM                     
Sbjct: 74  MTAAEVQELVKRERNVPLIIDFYATWCGPCILMAQELEMLAVEYENNAMIIKVDTDDEYE 133

Query: 61  ------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM 78
                 VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIID EM
Sbjct: 134 FSRDMQVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 177

[Close]
BLAST of HG10004404 vs. TAIR 10
Match: AT3G06730.1 (Thioredoxin z )

HSP 1 Score: 128.6 bits (322), Expect = 2.1e-30
Identity = 64/104 (61.54%), Postives = 73/104 (70.19%), Query Frame = 0 

Query: 1   MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM--------------------- 60
           +++ E+QELVKG+R VPLI+DFYATWCGPCILMAQELEM                     
Sbjct: 80  LSAQELQELVKGDRKVPLIVDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDDEYE 139

Query: 61  ------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM 78
                 VRGLPTLFFISPDP+K+AIRTEGLIP+QMM DIID EM
Sbjct: 140 FARDMQVRGLPTLFFISPDPSKDAIRTEGLIPLQMMHDIIDNEM 183

[Close]
BLAST of HG10004404 vs. TAIR 10
Match: AT1G43560.1 (thioredoxin Y2 )

HSP 1 Score: 40.4 bits (93), Expect = 7.5e-04
Identity = 15/24 (62.50%), Postives = 18/24 (75.00%), Query Frame = 0 

Query: 17  PLIIDFYATWCGPCILMAQELEMV 41
           P+++DFYATWCGPC LM   L  V
Sbjct: 78  PVLVDFYATWCGPCQLMVPILNEV 101

The following BLAST results are available for this feature:
BLAST of HG10004404 vs. NCBI nr
Match NameE-valueIdentityDescription
EOY19739.11.2e-3288.31Thioredoxin z, P,TRX z isoform 2 [Theobroma cacao][more]
XP_038884365.11.4e-3173.08thioredoxin-like protein CITRX, chloroplastic [Benincasa hispida][more]
XP_004146769.13.0e-3172.12thioredoxin-like protein CITRX, chloroplastic [Cucumis sativus] >KGN47767.1 hypo... [more]
KAA0064789.15.2e-3172.12thioredoxin-like protein CITRX [Cucumis melo var. makuwa][more]
XP_022131323.15.2e-3172.12thioredoxin-like protein CITRX, chloroplastic [Momordica charantia][more]
BLAST of HG10004404 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6JE387.8e-3061.54Thioredoxin-like protein CITRX1, chloroplastic OS=Nicotiana benthamiana OX=4100 ... [more]
Q6JE377.8e-3061.54Thioredoxin-like protein CITRX2, chloroplastic OS=Nicotiana benthamiana OX=4100 ... [more]
Q9LKW02.3e-2961.54Thioredoxin-like protein CITRX, chloroplastic OS=Solanum lycopersicum OX=4081 GN... [more]
Q9M7X93.0e-2961.54Thioredoxin-like protein CITRX, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
M1A3D58.6e-2960.58Thioredoxin-like protein CITRX, chloroplastic OS=Solanum tuberosum OX=4113 GN=CI... [more]
BLAST of HG10004404 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A061FY756.0e-3388.31Thioredoxin z, P,TRX z isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_045045 PE=3 S... [more]
A0A0A0KH971.5e-3172.12Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G401380... [more]
A0A5A7VH452.5e-3172.12Thioredoxin-like protein CITRX OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A6J1BT122.5e-3172.12thioredoxin-like protein CITRX, chloroplastic OS=Momordica charantia OX=3673 GN=... [more]
A0A1S3BCN52.1e-3071.15thioredoxin-like protein CITRX, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1034... [more]
BLAST of HG10004404 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G06730.12.1e-3061.54Thioredoxin z [more]
AT1G43560.17.5e-0462.50thioredoxin Y2 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 6..38
e-value: 7.2E-7
score: 29.2
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 1..40
e-value: 4.5E-9
score: 37.9
NoneNo IPR availablePANTHERPTHR47834:SF2THIOREDOXIN-LIKE PROTEIN CITRX, CHLOROPLASTICcoord: 40..77
NoneNo IPR availablePANTHERPTHR47834:SF2THIOREDOXIN-LIKE PROTEIN CITRX, CHLOROPLASTICcoord: 2..40
NoneNo IPR availableCDDcd02947TRX_familycoord: 4..74
e-value: 3.6267E-10
score: 49.0937
IPR044182Thioredoxin-like protein CITRX, chloroplasticPANTHERPTHR47834THIOREDOXIN-LIKE PROTEIN CITRX, CHLOROPLASTICcoord: 2..40
IPR044182Thioredoxin-like protein CITRX, chloroplasticPANTHERPTHR47834THIOREDOXIN-LIKE PROTEIN CITRX, CHLOROPLASTICcoord: 40..77
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 2..75

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10004404.1HG10004404.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0009657 plastid organization
cellular_component GO:0009507 chloroplast
molecular_function GO:0015035 protein-disulfide reductase activity