Homology
BLAST of HG10004370 vs. NCBI nr
Match:
XP_023546997.1 (pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1122.5 bits (2902), Expect = 0.0e+00
Identity = 556/619 (89.82%), Postives = 592/619 (95.64%), Query Frame = 0
Query: 1 MASKMAILSRTHTLIRTTNLNNVCFFKPISTFTFLSQQPQLANEPVDIPPSTPLPPNPAS 60
MASKMAILSRT TLIR +NLNNVCFFKPI+TFTFLSQ+PQLANEP DI PSTPLPPNPAS
Sbjct: 1 MASKMAILSRTQTLIRNSNLNNVCFFKPITTFTFLSQEPQLANEPSDI-PSTPLPPNPAS 60
Query: 61 GSPLYKENWRNPIPNYSMAPSLVPLGLLSQSPSSRIEALSQTLDVQSLLNVFADWMASQR 120
GSPLY ENWRNPIPN S S++PLG L+QSPSSRIEALSQTLDVQSLLNVFADWMASQR
Sbjct: 61 GSPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQR 120
Query: 121 WEDMKQLFEFWIRSLDKDGKPNKPDVNLYNNYLRANLMVNATAGELLDIVAQMEDYAITP 180
WEDMKQLFEFWIRSLDK+GKPNKPDVNLYNNYLRANLMVNA+AGELLD+VAQMEDYAI+P
Sbjct: 121 WEDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISP 180
Query: 181 NTASYNLVLKAMYQARETEAAEKLIESMLQTGEESMPDDESYDIVIGMLLSTDQMDAVLK 240
NTAS+NLVLKAMYQA+ETEAAEKLIE MLQTGEESMPDDESYD+VIGMLLSTDQ+DA LK
Sbjct: 181 NTASFNLVLKAMYQAKETEAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALK 240
Query: 241 YIDLTLKSGHILSLKVFSECVRSCVEKGRLDTLVAVIDRCKTTVQNKALCPPWNLCNYIA 300
YIDLTLKSGH+LSLKVF+ECVRSCV+KGRLDTLV+VIDRCK TVQNKALCP WNLCNYIA
Sbjct: 241 YIDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNYIA 300
Query: 301 EVATQEDNSKLAYYALEFIAKWIARGENARPPVHLSVDEGLVVSALGTAGRTHSSSLLDA 360
EVATQEDNSKLAYYALEF A+WIARGENARPPVHLSVDEG+VVSALGTAGRT+SSSLLDA
Sbjct: 301 EVATQEDNSKLAYYALEFTARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDA 360
Query: 361 AWAILKRSLRQKKVPNPESYLGKIYALASFGDLQRAFTTLHEFEEAYRTFDDGAGEEMLS 420
+WAILKRSL QKKVPNPESYLGKIYALASFG+LQRAFTTL EFEEAYRT DDGAGEEM S
Sbjct: 361 SWAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTSDDGAGEEMFS 420
Query: 421 PFTSLYPLVVACSKKGFETLDTVYFQLENLSSADPPYKSVAALNCVILGCANIWDLDRAY 480
PFTSLYPLVVACSKKGFETLDTVYFQLENLS ADPPYKSV+ALNCVILGCANIWDLDRAY
Sbjct: 421 PFTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAY 480
Query: 481 QTFEAIGSSFGLTPDIHSYNALMYAFGRLKKTFEAARVFEHLVGLGIKPNARSYSLLVDA 540
QTFEAIGSSFGLTPDIHSYNAL+YAFGRLKKTFEAARVFEHLVGLG+KPNA+SYSLLVDA
Sbjct: 481 QTFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDA 540
Query: 541 HLINRDPKSALSAIDDMVTAGFVPSREMLKKVRRRCIREQDYDSNDRVDYFAKIFRIRMG 600
H+INRDPKSALS ID+MVTAGFVPS+EMLKKVRRRC+RE DY SND+VDY AK F+IRMG
Sbjct: 541 HIINRDPKSALSVIDNMVTAGFVPSKEMLKKVRRRCMREMDYPSNDKVDYLAKNFKIRMG 600
Query: 601 TDKRRDILFMLDYGTDYVA 620
T+ RRD+LF LDYGT+YVA
Sbjct: 601 TENRRDMLFNLDYGTNYVA 618
BLAST of HG10004370 vs. NCBI nr
Match:
KAG7029573.1 (Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 553/619 (89.34%), Postives = 592/619 (95.64%), Query Frame = 0
Query: 1 MASKMAILSRTHTLIRTTNLNNVCFFKPISTFTFLSQQPQLANEPVDIPPSTPLPPNPAS 60
MASKMAILSRT T+IR +NLNNVCFFKPI+TFTFLSQ+PQLANEP DI PSTPLPPNPAS
Sbjct: 1 MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADI-PSTPLPPNPAS 60
Query: 61 GSPLYKENWRNPIPNYSMAPSLVPLGLLSQSPSSRIEALSQTLDVQSLLNVFADWMASQR 120
GSPLY ENWRNPIPN S S++PLG L+QSPSSRIEALSQTLDVQSLLNVFADWMASQR
Sbjct: 61 GSPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQR 120
Query: 121 WEDMKQLFEFWIRSLDKDGKPNKPDVNLYNNYLRANLMVNATAGELLDIVAQMEDYAITP 180
WEDMKQLFEFWIRSLDK+GKPNKPDVNLYNNYLRANLMVNA+AGELLD+VAQMEDYAI+P
Sbjct: 121 WEDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISP 180
Query: 181 NTASYNLVLKAMYQARETEAAEKLIESMLQTGEESMPDDESYDIVIGMLLSTDQMDAVLK 240
NTAS+NLVLKAMYQA+ET+AAEKLIE MLQTGEESMPDDESYD+VIGMLLSTDQ+DA LK
Sbjct: 181 NTASFNLVLKAMYQAKETQAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALK 240
Query: 241 YIDLTLKSGHILSLKVFSECVRSCVEKGRLDTLVAVIDRCKTTVQNKALCPPWNLCNYIA 300
YIDLTLKSGH+LSLKVF+ECVRSCV+KGRLDTLV+VIDRCK TVQNKALCP WNLCN+IA
Sbjct: 241 YIDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIA 300
Query: 301 EVATQEDNSKLAYYALEFIAKWIARGENARPPVHLSVDEGLVVSALGTAGRTHSSSLLDA 360
EVATQEDNSKLAYYALEF+A+WIARGENARPPVHLSVDEG+VVSALGTAGRT+SSSLLDA
Sbjct: 301 EVATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDA 360
Query: 361 AWAILKRSLRQKKVPNPESYLGKIYALASFGDLQRAFTTLHEFEEAYRTFDDGAGEEMLS 420
+WAILKRSL QKKVPNPESYLGKIYALASFG+LQRAFTTL EFEEAYRT DDGAGEEM S
Sbjct: 361 SWAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFS 420
Query: 421 PFTSLYPLVVACSKKGFETLDTVYFQLENLSSADPPYKSVAALNCVILGCANIWDLDRAY 480
PFTSLYPLVVACSKKGFETLDTVYFQLENLS ADPPYKSV+ALNCVILGCANIWDLDRAY
Sbjct: 421 PFTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAY 480
Query: 481 QTFEAIGSSFGLTPDIHSYNALMYAFGRLKKTFEAARVFEHLVGLGIKPNARSYSLLVDA 540
QTFEAIGSSFGLTPDIHSYNAL+YAFGRLKKTFEAARVFEHLVGLG+KPNA+SYSLLVDA
Sbjct: 481 QTFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDA 540
Query: 541 HLINRDPKSALSAIDDMVTAGFVPSREMLKKVRRRCIREQDYDSNDRVDYFAKIFRIRMG 600
H+INRDPKSALS ID+MVTAGFVPS+EMLKK RRRC+RE DY SND+VDY AK F+IRMG
Sbjct: 541 HIINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDKVDYLAKNFKIRMG 600
Query: 601 TDKRRDILFMLDYGTDYVA 620
T+ RRDILF LDYGT+YVA
Sbjct: 601 TENRRDILFNLDYGTNYVA 618
BLAST of HG10004370 vs. NCBI nr
Match:
XP_023002111.1 (pentatricopeptide repeat-containing protein At1g26460, mitochondrial [Cucurbita maxima] >XP_023002112.1 pentatricopeptide repeat-containing protein At1g26460, mitochondrial [Cucurbita maxima])
HSP 1 Score: 1119.8 bits (2895), Expect = 0.0e+00
Identity = 555/619 (89.66%), Postives = 588/619 (94.99%), Query Frame = 0
Query: 1 MASKMAILSRTHTLIRTTNLNNVCFFKPISTFTFLSQQPQLANEPVDIPPSTPLPPNPAS 60
MASKMAILSRTHTLIR +NLNNVC FKPI+TFTFLSQ+P LANEP D+ PSTPLPPNPAS
Sbjct: 1 MASKMAILSRTHTLIRNSNLNNVCSFKPITTFTFLSQEPHLANEPADV-PSTPLPPNPAS 60
Query: 61 GSPLYKENWRNPIPNYSMAPSLVPLGLLSQSPSSRIEALSQTLDVQSLLNVFADWMASQR 120
GSPLY ENWRNPIPN SM SL+PLG L+QSPSSRI+ALSQTLDVQSLLNVFADWMASQR
Sbjct: 61 GSPLYNENWRNPIPNASMTQSLIPLGFLNQSPSSRIQALSQTLDVQSLLNVFADWMASQR 120
Query: 121 WEDMKQLFEFWIRSLDKDGKPNKPDVNLYNNYLRANLMVNATAGELLDIVAQMEDYAITP 180
W+DMKQLFE WIRSLDK+GKPNKPDVNLYNNYLRANLMVNATAGELLD+VAQMEDYAI+P
Sbjct: 121 WDDMKQLFESWIRSLDKNGKPNKPDVNLYNNYLRANLMVNATAGELLDLVAQMEDYAISP 180
Query: 181 NTASYNLVLKAMYQARETEAAEKLIESMLQTGEESMPDDESYDIVIGMLLSTDQMDAVLK 240
N+AS+NLVLKAMYQARETEAAEKLIE MLQTG ESMPDDESYD+VIGMLLSTDQ+DA LK
Sbjct: 181 NSASFNLVLKAMYQARETEAAEKLIERMLQTGGESMPDDESYDLVIGMLLSTDQIDAALK 240
Query: 241 YIDLTLKSGHILSLKVFSECVRSCVEKGRLDTLVAVIDRCKTTVQNKALCPPWNLCNYIA 300
YIDLTLKSGH+LSLKVF+ECVRSCV+KGRLDTLV+VIDRCK TVQNKALCP WNLCNYIA
Sbjct: 241 YIDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNYIA 300
Query: 301 EVATQEDNSKLAYYALEFIAKWIARGENARPPVHLSVDEGLVVSALGTAGRTHSSSLLDA 360
EVA QEDNSKLAYYALEF+A+WIARGENARPPVHLSVDEG+VVSALGTAGRT+SSSLLDA
Sbjct: 301 EVAMQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDA 360
Query: 361 AWAILKRSLRQKKVPNPESYLGKIYALASFGDLQRAFTTLHEFEEAYRTFDDGAGEEMLS 420
AWAILKRSLRQKKVPNPESYLGKIYALASFG+LQRAFTTLHEFEEAYRT DDGA EEM S
Sbjct: 361 AWAILKRSLRQKKVPNPESYLGKIYALASFGNLQRAFTTLHEFEEAYRTSDDGAAEEMFS 420
Query: 421 PFTSLYPLVVACSKKGFETLDTVYFQLENLSSADPPYKSVAALNCVILGCANIWDLDRAY 480
PFTSLYPLVVACSKKGFETLDTVYFQLENLS ADPPYKSVAALNCVILGCANIWDLDRAY
Sbjct: 421 PFTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVAALNCVILGCANIWDLDRAY 480
Query: 481 QTFEAIGSSFGLTPDIHSYNALMYAFGRLKKTFEAARVFEHLVGLGIKPNARSYSLLVDA 540
QTFEAI SSFGLTPDIHSYNALMYAFG+LKKTFEAA+VFEHLVGLG+KPNA SYSLLVDA
Sbjct: 481 QTFEAISSSFGLTPDIHSYNALMYAFGKLKKTFEAAKVFEHLVGLGVKPNATSYSLLVDA 540
Query: 541 HLINRDPKSALSAIDDMVTAGFVPSREMLKKVRRRCIREQDYDSNDRVDYFAKIFRIRMG 600
HLINRDPKSALS IDDMVTAGF PS++MLKKVRRRCIRE DYDSNDRVDY AK F+IRMG
Sbjct: 541 HLINRDPKSALSVIDDMVTAGFAPSKQMLKKVRRRCIREMDYDSNDRVDYQAKSFKIRMG 600
Query: 601 TDKRRDILFMLDYGTDYVA 620
T+ RRD+LF LD+GT YVA
Sbjct: 601 TENRRDMLFNLDFGTHYVA 618
BLAST of HG10004370 vs. NCBI nr
Match:
XP_023537323.1 (pentatricopeptide repeat-containing protein At1g26460, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023537324.1 pentatricopeptide repeat-containing protein At1g26460, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1119.4 bits (2894), Expect = 0.0e+00
Identity = 553/619 (89.34%), Postives = 589/619 (95.15%), Query Frame = 0
Query: 1 MASKMAILSRTHTLIRTTNLNNVCFFKPISTFTFLSQQPQLANEPVDIPPSTPLPPNPAS 60
MASKMAILSRTHTLIR +NLNNVC FKPI+TFT+LSQ+PQ+ANEP D+ PSTPLPPNPAS
Sbjct: 1 MASKMAILSRTHTLIRNSNLNNVCSFKPITTFTYLSQEPQVANEPADV-PSTPLPPNPAS 60
Query: 61 GSPLYKENWRNPIPNYSMAPSLVPLGLLSQSPSSRIEALSQTLDVQSLLNVFADWMASQR 120
GSPLY ENWRNPIPN SM SL+PLG L+QSPSSRI+ALSQTLDVQSLLNVFADWMASQR
Sbjct: 61 GSPLYNENWRNPIPNASMTQSLIPLGFLNQSPSSRIQALSQTLDVQSLLNVFADWMASQR 120
Query: 121 WEDMKQLFEFWIRSLDKDGKPNKPDVNLYNNYLRANLMVNATAGELLDIVAQMEDYAITP 180
W+DMKQLFE WIRSLDK+GKPNKPDVNLYNNYLRANLMVNATAGELLD+VAQMEDYAI+P
Sbjct: 121 WDDMKQLFESWIRSLDKNGKPNKPDVNLYNNYLRANLMVNATAGELLDLVAQMEDYAISP 180
Query: 181 NTASYNLVLKAMYQARETEAAEKLIESMLQTGEESMPDDESYDIVIGMLLSTDQMDAVLK 240
N+AS+NLVLKAMYQARETEAAEKLIE MLQTG ESMPDDESYD+VIGMLLSTDQ+DA LK
Sbjct: 181 NSASFNLVLKAMYQARETEAAEKLIERMLQTGGESMPDDESYDLVIGMLLSTDQIDAALK 240
Query: 241 YIDLTLKSGHILSLKVFSECVRSCVEKGRLDTLVAVIDRCKTTVQNKALCPPWNLCNYIA 300
YIDLTLKSGH+LSLKVF+ECVRSCV+KGRLDTLV+VIDRCK TVQNKALCPPWNLCNYIA
Sbjct: 241 YIDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPPWNLCNYIA 300
Query: 301 EVATQEDNSKLAYYALEFIAKWIARGENARPPVHLSVDEGLVVSALGTAGRTHSSSLLDA 360
EVA QEDNSKLAYYALEF+A+WIARGENARPPVHLSVDEG+VVSALGTAGRT+SSSLLDA
Sbjct: 301 EVAMQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDA 360
Query: 361 AWAILKRSLRQKKVPNPESYLGKIYALASFGDLQRAFTTLHEFEEAYRTFDDGAGEEMLS 420
AWAILKRSLRQKKVPNPESYLGKIYALASFG+LQRAFTTLHEFEEAYRT DDGA EEM S
Sbjct: 361 AWAILKRSLRQKKVPNPESYLGKIYALASFGNLQRAFTTLHEFEEAYRTSDDGAAEEMFS 420
Query: 421 PFTSLYPLVVACSKKGFETLDTVYFQLENLSSADPPYKSVAALNCVILGCANIWDLDRAY 480
PFTSLYPLV+ACSKKGFETLDTVYFQLENLS ADPPYKSVAALNCVILGCANIWDLDRAY
Sbjct: 421 PFTSLYPLVMACSKKGFETLDTVYFQLENLSRADPPYKSVAALNCVILGCANIWDLDRAY 480
Query: 481 QTFEAIGSSFGLTPDIHSYNALMYAFGRLKKTFEAARVFEHLVGLGIKPNARSYSLLVDA 540
QTFEAI SSFG TPDIHSYNALMYAFG+LKKTFEAARVFEHLVGLG+KPNA SYSLLVDA
Sbjct: 481 QTFEAISSSFGFTPDIHSYNALMYAFGKLKKTFEAARVFEHLVGLGVKPNATSYSLLVDA 540
Query: 541 HLINRDPKSALSAIDDMVTAGFVPSREMLKKVRRRCIREQDYDSNDRVDYFAKIFRIRMG 600
HLINRDPKSALS IDDMV AGF PS++MLKKVRRRCIRE DYDSNDRVDY AK F+IRMG
Sbjct: 541 HLINRDPKSALSVIDDMVIAGFAPSKQMLKKVRRRCIREMDYDSNDRVDYQAKSFKIRMG 600
Query: 601 TDKRRDILFMLDYGTDYVA 620
T+ RRD+LF LD+GT+YVA
Sbjct: 601 TENRRDMLFNLDFGTNYVA 618
BLAST of HG10004370 vs. NCBI nr
Match:
KAG7020167.1 (Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1117.8 bits (2890), Expect = 0.0e+00
Identity = 553/619 (89.34%), Postives = 589/619 (95.15%), Query Frame = 0
Query: 1 MASKMAILSRTHTLIRTTNLNNVCFFKPISTFTFLSQQPQLANEPVDIPPSTPLPPNPAS 60
MASKMAILSRTHTLIR +NLNNVC FKPI+TFT+LSQ+PQ+ANEP D+ PSTPLPPNPAS
Sbjct: 1 MASKMAILSRTHTLIRNSNLNNVCSFKPITTFTYLSQEPQVANEPADV-PSTPLPPNPAS 60
Query: 61 GSPLYKENWRNPIPNYSMAPSLVPLGLLSQSPSSRIEALSQTLDVQSLLNVFADWMASQR 120
GSPLY ENWRNPIPN SM SL+PLG L+QSPSSRI+ALSQTLDVQSLLNVFADWMASQR
Sbjct: 61 GSPLYNENWRNPIPNASMTQSLIPLGFLNQSPSSRIQALSQTLDVQSLLNVFADWMASQR 120
Query: 121 WEDMKQLFEFWIRSLDKDGKPNKPDVNLYNNYLRANLMVNATAGELLDIVAQMEDYAITP 180
W+DMKQLFE WIRSLDK+GKPNKPDVNLYNNYLRANLMVNATAGELLD+VAQMEDYAI+P
Sbjct: 121 WDDMKQLFESWIRSLDKNGKPNKPDVNLYNNYLRANLMVNATAGELLDLVAQMEDYAISP 180
Query: 181 NTASYNLVLKAMYQARETEAAEKLIESMLQTGEESMPDDESYDIVIGMLLSTDQMDAVLK 240
N+AS+NLVLKAMYQARETEAAEKLIE MLQTG ESMPDDESYD+VIGMLLSTDQ+DA LK
Sbjct: 181 NSASFNLVLKAMYQARETEAAEKLIERMLQTGGESMPDDESYDLVIGMLLSTDQIDAALK 240
Query: 241 YIDLTLKSGHILSLKVFSECVRSCVEKGRLDTLVAVIDRCKTTVQNKALCPPWNLCNYIA 300
YIDLTLKSGH+LSLKVF++CVRSCV+KGRLDTLV+VIDRCK TVQNKALCP WNLCNYIA
Sbjct: 241 YIDLTLKSGHMLSLKVFTDCVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNYIA 300
Query: 301 EVATQEDNSKLAYYALEFIAKWIARGENARPPVHLSVDEGLVVSALGTAGRTHSSSLLDA 360
EVA QEDNSKLAYYALEF+A+WIARGENARPPVHLSVDEG+VVSALGTAGRT+SSSLLDA
Sbjct: 301 EVAMQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDA 360
Query: 361 AWAILKRSLRQKKVPNPESYLGKIYALASFGDLQRAFTTLHEFEEAYRTFDDGAGEEMLS 420
AWAILKRSLRQKKVPNPESYLGKIYALASFG+LQRAFTTLHEFEEAYRT DDGA EEM S
Sbjct: 361 AWAILKRSLRQKKVPNPESYLGKIYALASFGNLQRAFTTLHEFEEAYRTSDDGAAEEMFS 420
Query: 421 PFTSLYPLVVACSKKGFETLDTVYFQLENLSSADPPYKSVAALNCVILGCANIWDLDRAY 480
PFTSLYPLVVACSKKGFETLDTVYFQLENLS ADPPYKSVAALNCVILGCANIWDLDRAY
Sbjct: 421 PFTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVAALNCVILGCANIWDLDRAY 480
Query: 481 QTFEAIGSSFGLTPDIHSYNALMYAFGRLKKTFEAARVFEHLVGLGIKPNARSYSLLVDA 540
QTFEAI SSFGLTPDIHSYNALMYAFG+LKKTFEAARVFEHLVGLG+KPNA SYSLLVDA
Sbjct: 481 QTFEAISSSFGLTPDIHSYNALMYAFGKLKKTFEAARVFEHLVGLGVKPNATSYSLLVDA 540
Query: 541 HLINRDPKSALSAIDDMVTAGFVPSREMLKKVRRRCIREQDYDSNDRVDYFAKIFRIRMG 600
HLINRDPKSALS IDDMV AGF PS++MLKKVRRRCIRE DYDSNDRVDY AK F+IRMG
Sbjct: 541 HLINRDPKSALSVIDDMVIAGFAPSKQMLKKVRRRCIREMDYDSNDRVDYQAKSFKIRMG 600
Query: 601 TDKRRDILFMLDYGTDYVA 620
T+ RRD+LF LD+GT+YVA
Sbjct: 601 TENRRDMLFNLDFGTNYVA 618
BLAST of HG10004370 vs. ExPASy Swiss-Prot
Match:
Q9FZD1 (Pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g26460 PE=1 SV=1)
HSP 1 Score: 823.5 bits (2126), Expect = 1.5e-237
Identity = 414/623 (66.45%), Postives = 498/623 (79.94%), Query Frame = 0
Query: 1 MASKMAILSRTHTLIRTTNLNNVCFFKPISTFT---FLSQQPQLANEPVDIPP------S 60
MAS + SR +L++T N PI + FLSQ P LA E D P S
Sbjct: 1 MASHLFTRSRI-SLLKTLKPNPFTSASPIRAISGTPFLSQDPLLATESTDHDPSNHQSTS 60
Query: 61 TPLPPNPASGSPLYKENWRNPIPNY-SMAPSLVPLGLLSQSPSSRIEALSQTLDVQSLLN 120
TPLPPNPA+GSPLY+ENWR+PIPN S SLVPLG L+Q+P+ RI ALS+TLD+ SLLN
Sbjct: 61 TPLPPNPATGSPLYQENWRSPIPNTPSFNQSLVPLGFLNQAPAPRIRALSETLDMNSLLN 120
Query: 121 VFADWMASQRWEDMKQLFEFWIRSLDKDGKPNKPDVNLYNNYLRANLMVNATAGELLDIV 180
+FADW ASQRW DMKQLFE W+RSLDK+GKPNKPDVNLYN+YLRANLM+ A+AG++LD+V
Sbjct: 121 MFADWTASQRWSDMKQLFEVWVRSLDKNGKPNKPDVNLYNHYLRANLMMGASAGDMLDLV 180
Query: 181 AQMEDYAITPNTASYNLVLKAMYQARETEAAEKLIESMLQTGEESMPDDESYDIVIGMLL 240
A ME++++ PNTASYNLVLKAMYQARETEAA KL+E ML G++S+PDDESYD+VIGM
Sbjct: 181 APMEEFSVEPNTASYNLVLKAMYQARETEAAMKLLERMLLLGKDSLPDDESYDLVIGMHF 240
Query: 241 STDQMDAVLKYIDLTLKSGHILSLKVFSECVRSCVEKGRLDTLVAVIDRCKTTVQNKALC 300
+ D +K +D LKSG++LS VF+ECVRSCV KGR DTLV++I+RCK +NK+LC
Sbjct: 241 GVGKNDEAMKVMDTALKSGYMLSTSVFTECVRSCVAKGRTDTLVSIIERCKAVDRNKSLC 300
Query: 301 PPWNLCNYIAEVATQEDNSKLAYYALEFIAKWIARGENARPPVHLSVDEGLVVSALGTAG 360
P W LCNYIAEVA QEDNSKLA+YA EF+ KWI RGE ARP V SVDEGLVV+ L +A
Sbjct: 301 PSWILCNYIAEVAIQEDNSKLAFYAFEFMFKWITRGEMARPSVIFSVDEGLVVAGLASAA 360
Query: 361 RTHSSSLLDAAWAILKRSLRQKKVPNPESYLGKIYALASFGDLQRAFTTLHEFEEAYRTF 420
RT SSSL++ +W ILK+SLR +K NP SY+ KI A AS G+LQ+AFT+LHE E AY
Sbjct: 361 RTCSSSLVEGSWTILKQSLRGRKAANPASYIAKINAYASLGNLQKAFTSLHELESAYADS 420
Query: 421 DDGAGEEMLSPFTSLYPLVVACSKKGFETLDTVYFQLENLSSADPPYKSVAALNCVILGC 480
+ EEMLSPFTSLYPLVVACSKKGFETLD VYFQLE+LS D PYKSVAALNC+ILGC
Sbjct: 421 EKEVVEEMLSPFTSLYPLVVACSKKGFETLDEVYFQLESLSQGDTPYKSVAALNCIILGC 480
Query: 481 ANIWDLDRAYQTFEAIGSSFGLTPDIHSYNALMYAFGRLKKTFEAARVFEHLVGLGIKPN 540
AN WDLDRAYQTFEAI +SFGLTP+I SYNAL+YAFG++KKTFEA VFEHLV +G+KP+
Sbjct: 481 ANTWDLDRAYQTFEAISASFGLTPNIDSYNALLYAFGKVKKTFEATNVFEHLVSIGVKPD 540
Query: 541 ARSYSLLVDAHLINRDPKSALSAIDDMVTAGFVPSREMLKKVRRRCIREQDYDSNDRVDY 600
+R+YSLLVDAHLINRDPKSAL+ +DDM+ AGF PSRE LKK+RRRC+RE D +++D+V+
Sbjct: 541 SRTYSLLVDAHLINRDPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDDENDDQVEA 600
Query: 601 FAKIFRIRMGTDKRRDILFMLDY 614
AK F+IRMG++ RR++LF +DY
Sbjct: 601 LAKKFQIRMGSENRRNMLFNIDY 622
BLAST of HG10004370 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 67.8 bits (164), Expect = 5.0e-10
Identity = 85/428 (19.86%), Postives = 167/428 (39.02%), Query Frame = 0
Query: 144 PDVNLYNNYLRANLMVNATAGELLDIVAQMEDYAITPNTASYNLVLKAMYQARETEAAEK 203
P V YN L A + ++ +M + ++PN +YN++++ A + A
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 204 LIESMLQTGEESMPDDESYDIVIGMLLSTDQMDAVLKYIDLTLKSGHILSLKVFSECVRS 263
L + M G +P+ +Y+ +I ++D K + G +L ++ +
Sbjct: 227 LFDKMETKG--CLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 286
Query: 264 CVEKGRLDTLVAVIDRCKTTVQNKALCPPWNLCNYIAEVATQEDNSKLAYYALE--FIAK 323
+GR+ + V+ N Y + T N+ + Y E F
Sbjct: 287 LCREGRMKEVSFVLTE-------------MNRRGYSLDEVTY--NTLIKGYCKEGNFHQA 346
Query: 324 WIARGENARPPVHLSVDEGLVVSALGTAGRTHS---SSLLDAAWAILKRSLRQKKVPNPE 383
+ E R GL S + HS + ++ A L + + PN
Sbjct: 347 LVMHAEMLR--------HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 406
Query: 384 SYLGKIYALASFGDLQRAFTTLHEFEEAYRTFDDGAGEEMLSPFTSLYPLVV--ACSKKG 443
+Y + + G + A+ L E D+G SP Y ++ C
Sbjct: 407 TYTTLVDGFSQKGYMNEAYRVLREMN------DNG-----FSPSVVTYNALINGHCVTGK 466
Query: 444 FETLDTVYFQLENLSSADPPYKSVAALNCVILGCANIWDLDRAYQTFEAIGSSFGLTPDI 503
E V ++ + V + + V+ G +D+D A + + G+ PD
Sbjct: 467 MEDAIAVLEDMKEKGLS----PDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDT 526
Query: 504 HSYNALMYAFGRLKKTFEAARVFEHLVGLGIKPNARSYSLLVDAHLINRDPKSALSAIDD 563
+Y++L+ F ++T EA ++E ++ +G+ P+ +Y+ L++A+ + D + AL ++
Sbjct: 527 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 553
Query: 564 MVTAGFVP 565
MV G +P
Sbjct: 587 MVEKGVLP 553
BLAST of HG10004370 vs. ExPASy Swiss-Prot
Match:
Q9SZ52 (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)
HSP 1 Score: 65.5 bits (158), Expect = 2.5e-09
Identity = 35/132 (26.52%), Postives = 66/132 (50.00%), Query Frame = 0
Query: 444 YFQLENLSSADPPYKSVAALNCVILGCANIWDLDRAYQTFEAIGSSFGLTPDIHSYNALM 503
YF+ S +P V N +I G L+ A F + +S G+TPD+++YN+L+
Sbjct: 983 YFKELKESGLNP---DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1042
Query: 504 YAFGRLKKTFEAARVFEHLVGLGIKPNARSYSLLVDAHLINRDPKSALSAIDDMVTAGFV 563
G EA +++ + G++PN +++ L+ + ++ P+ A + MVT GF
Sbjct: 1043 LNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFS 1102
Query: 564 PSREMLKKVRRR 576
P+ +++ R
Sbjct: 1103 PNTGTYEQLPNR 1111
BLAST of HG10004370 vs. ExPASy Swiss-Prot
Match:
Q9M907 (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX=3702 GN=At3g06920 PE=2 SV=1)
HSP 1 Score: 63.9 bits (154), Expect = 7.2e-09
Identity = 86/434 (19.82%), Postives = 162/434 (37.33%), Query Frame = 0
Query: 180 PNTASYNLVLKAMYQARETEAAEKLIESMLQTGEESMPDDESYDIVIGMLLSTDQMDAVL 239
P+ +YN +L + + + + A K+ E M +++ P+ +Y+I+I ML ++D
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEM---KKDAAPNLSTYNILIDMLCRAGKLDTAF 400
Query: 240 KYIDLTLKSGHILSLKVFSECVRSCVEKGRLDTLVAVIDRCKTTVQNKALCPPWNLCNYI 299
+ D K+G +++ + V + +LD A+ + V +L + +
Sbjct: 401 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 460
Query: 300 AEVATQEDNSKLAYYALE------------FIAKWIARG--------------ENARPPV 359
+V +D K+ L+ I + G +N P +
Sbjct: 461 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 520
Query: 360 HLSVDEGLVVSALGTAGRTHSSSLLDAAWAILKRSLRQKKVPNPESYLGKIYALASFGDL 419
L + + AG A+ + ++ VP+ SY I+ L G
Sbjct: 521 QLL---NTYMDCMFKAGEPEKGR------AMFEEIKARRFVPDARSYSILIHGLIKAGFA 580
Query: 420 QRAFTTLHEFEEAYRTFDDGAGEEMLSPF------TSLYPLVVACSKKGFE----TLDTV 479
+ + +E D A ++ F Y L+ KGFE T +V
Sbjct: 581 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 640
Query: 480 YFQLENLSSADPPYK------------SVAALNCVILGCANIWDLDRAYQTFEAIGSSFG 539
L + D Y +V + +I G + +D AY E + G
Sbjct: 641 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK-G 700
Query: 540 LTPDIHSYNALMYAFGRLKKTFEAARVFEHLVGLGIKPNARSYSLLVDAHLINRDPKSAL 566
LTP+++++N+L+ A + ++ EA F+ + L PN +Y +L++ R A
Sbjct: 701 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 760
BLAST of HG10004370 vs. ExPASy Swiss-Prot
Match:
Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)
HSP 1 Score: 59.7 bits (143), Expect = 1.4e-07
Identity = 54/226 (23.89%), Postives = 88/226 (38.94%), Query Frame = 0
Query: 358 LDAAWAILKRSLRQKKVPNPESYLGKIYALASFGDLQRAFTTLHEF-----EEAYRTFDD 417
+D+A ++L+ + VPN Y I++L+ + A L E TF+D
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 418 G-AGEEMLSPFTSLYPLVVACSKKGFETLDTVYFQLEN----LSSADP--------PYKS 477
G +V +GF D Y L N + D P
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 478 VAALNCVILGCANIWDLDRAYQTFEAIGSSFGLTPDIHSYNALMYAFGRLKKTFEAARVF 537
+ N +I G LD A + +S+G+ PD+ +YN+L+Y + + A V
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 538 EHLVGLGIKPNARSYSLLVDAHLINRDPKSALSAIDDMVTAGFVPS 566
+ G KPN SY++LVD A + +++M G P+
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
BLAST of HG10004370 vs. ExPASy TrEMBL
Match:
A0A6J1KIJ9 (pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111496072 PE=4 SV=1)
HSP 1 Score: 1119.8 bits (2895), Expect = 0.0e+00
Identity = 555/619 (89.66%), Postives = 588/619 (94.99%), Query Frame = 0
Query: 1 MASKMAILSRTHTLIRTTNLNNVCFFKPISTFTFLSQQPQLANEPVDIPPSTPLPPNPAS 60
MASKMAILSRTHTLIR +NLNNVC FKPI+TFTFLSQ+P LANEP D+ PSTPLPPNPAS
Sbjct: 1 MASKMAILSRTHTLIRNSNLNNVCSFKPITTFTFLSQEPHLANEPADV-PSTPLPPNPAS 60
Query: 61 GSPLYKENWRNPIPNYSMAPSLVPLGLLSQSPSSRIEALSQTLDVQSLLNVFADWMASQR 120
GSPLY ENWRNPIPN SM SL+PLG L+QSPSSRI+ALSQTLDVQSLLNVFADWMASQR
Sbjct: 61 GSPLYNENWRNPIPNASMTQSLIPLGFLNQSPSSRIQALSQTLDVQSLLNVFADWMASQR 120
Query: 121 WEDMKQLFEFWIRSLDKDGKPNKPDVNLYNNYLRANLMVNATAGELLDIVAQMEDYAITP 180
W+DMKQLFE WIRSLDK+GKPNKPDVNLYNNYLRANLMVNATAGELLD+VAQMEDYAI+P
Sbjct: 121 WDDMKQLFESWIRSLDKNGKPNKPDVNLYNNYLRANLMVNATAGELLDLVAQMEDYAISP 180
Query: 181 NTASYNLVLKAMYQARETEAAEKLIESMLQTGEESMPDDESYDIVIGMLLSTDQMDAVLK 240
N+AS+NLVLKAMYQARETEAAEKLIE MLQTG ESMPDDESYD+VIGMLLSTDQ+DA LK
Sbjct: 181 NSASFNLVLKAMYQARETEAAEKLIERMLQTGGESMPDDESYDLVIGMLLSTDQIDAALK 240
Query: 241 YIDLTLKSGHILSLKVFSECVRSCVEKGRLDTLVAVIDRCKTTVQNKALCPPWNLCNYIA 300
YIDLTLKSGH+LSLKVF+ECVRSCV+KGRLDTLV+VIDRCK TVQNKALCP WNLCNYIA
Sbjct: 241 YIDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNYIA 300
Query: 301 EVATQEDNSKLAYYALEFIAKWIARGENARPPVHLSVDEGLVVSALGTAGRTHSSSLLDA 360
EVA QEDNSKLAYYALEF+A+WIARGENARPPVHLSVDEG+VVSALGTAGRT+SSSLLDA
Sbjct: 301 EVAMQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDA 360
Query: 361 AWAILKRSLRQKKVPNPESYLGKIYALASFGDLQRAFTTLHEFEEAYRTFDDGAGEEMLS 420
AWAILKRSLRQKKVPNPESYLGKIYALASFG+LQRAFTTLHEFEEAYRT DDGA EEM S
Sbjct: 361 AWAILKRSLRQKKVPNPESYLGKIYALASFGNLQRAFTTLHEFEEAYRTSDDGAAEEMFS 420
Query: 421 PFTSLYPLVVACSKKGFETLDTVYFQLENLSSADPPYKSVAALNCVILGCANIWDLDRAY 480
PFTSLYPLVVACSKKGFETLDTVYFQLENLS ADPPYKSVAALNCVILGCANIWDLDRAY
Sbjct: 421 PFTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVAALNCVILGCANIWDLDRAY 480
Query: 481 QTFEAIGSSFGLTPDIHSYNALMYAFGRLKKTFEAARVFEHLVGLGIKPNARSYSLLVDA 540
QTFEAI SSFGLTPDIHSYNALMYAFG+LKKTFEAA+VFEHLVGLG+KPNA SYSLLVDA
Sbjct: 481 QTFEAISSSFGLTPDIHSYNALMYAFGKLKKTFEAAKVFEHLVGLGVKPNATSYSLLVDA 540
Query: 541 HLINRDPKSALSAIDDMVTAGFVPSREMLKKVRRRCIREQDYDSNDRVDYFAKIFRIRMG 600
HLINRDPKSALS IDDMVTAGF PS++MLKKVRRRCIRE DYDSNDRVDY AK F+IRMG
Sbjct: 541 HLINRDPKSALSVIDDMVTAGFAPSKQMLKKVRRRCIREMDYDSNDRVDYQAKSFKIRMG 600
Query: 601 TDKRRDILFMLDYGTDYVA 620
T+ RRD+LF LD+GT YVA
Sbjct: 601 TENRRDMLFNLDFGTHYVA 618
BLAST of HG10004370 vs. ExPASy TrEMBL
Match:
A0A6J1GHH4 (pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111454227 PE=4 SV=1)
HSP 1 Score: 1117.4 bits (2889), Expect = 0.0e+00
Identity = 555/619 (89.66%), Postives = 588/619 (94.99%), Query Frame = 0
Query: 1 MASKMAILSRTHTLIRTTNLNNVCFFKPISTFTFLSQQPQLANEPVDIPPSTPLPPNPAS 60
MASKMAILSRTHTLIR +NLNNVC FKPI+TFTFLSQ+ QLANEPVD+ PSTPLPPNPAS
Sbjct: 1 MASKMAILSRTHTLIRNSNLNNVCSFKPITTFTFLSQESQLANEPVDV-PSTPLPPNPAS 60
Query: 61 GSPLYKENWRNPIPNYSMAPSLVPLGLLSQSPSSRIEALSQTLDVQSLLNVFADWMASQR 120
GSPLY ENWRNPIPN SM SL+PLG L+QSPSSRI+ALSQTLDVQSLLNVFADWMASQR
Sbjct: 61 GSPLYNENWRNPIPNASMTQSLIPLGFLNQSPSSRIQALSQTLDVQSLLNVFADWMASQR 120
Query: 121 WEDMKQLFEFWIRSLDKDGKPNKPDVNLYNNYLRANLMVNATAGELLDIVAQMEDYAITP 180
W+DMKQLFE WIRSLDK+GKPNKPDVNLYNNYLRANLMVNATAGELLD+VAQMEDYAI+P
Sbjct: 121 WDDMKQLFESWIRSLDKNGKPNKPDVNLYNNYLRANLMVNATAGELLDLVAQMEDYAISP 180
Query: 181 NTASYNLVLKAMYQARETEAAEKLIESMLQTGEESMPDDESYDIVIGMLLSTDQMDAVLK 240
N+AS+NLVLKAMYQARETEAAEKLIE MLQTG ESMPDDESYD+VIGMLLSTDQ+DA LK
Sbjct: 181 NSASFNLVLKAMYQARETEAAEKLIERMLQTGGESMPDDESYDLVIGMLLSTDQIDAALK 240
Query: 241 YIDLTLKSGHILSLKVFSECVRSCVEKGRLDTLVAVIDRCKTTVQNKALCPPWNLCNYIA 300
YIDLTLKSGH+LSLKVF+ECVRSCV+KGRLDTLV+VIDRCK TVQNKALCP WNLCNYIA
Sbjct: 241 YIDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNYIA 300
Query: 301 EVATQEDNSKLAYYALEFIAKWIARGENARPPVHLSVDEGLVVSALGTAGRTHSSSLLDA 360
EVA QEDNSKLAYYALEF+A+WIARGENARPPVHLSVDEG+VVSALGTAGRT+SSSLLDA
Sbjct: 301 EVAMQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDA 360
Query: 361 AWAILKRSLRQKKVPNPESYLGKIYALASFGDLQRAFTTLHEFEEAYRTFDDGAGEEMLS 420
AWAILKRSLRQKKVPNPESYLGKIYALASFG+LQRAFTTLHEFEEAYRT DDGA EEM S
Sbjct: 361 AWAILKRSLRQKKVPNPESYLGKIYALASFGNLQRAFTTLHEFEEAYRTSDDGAAEEMFS 420
Query: 421 PFTSLYPLVVACSKKGFETLDTVYFQLENLSSADPPYKSVAALNCVILGCANIWDLDRAY 480
PFTSLYPLVVACSKKGFETLDTVYFQLENLS ADPPYKSVAALNCVILGCANIWDLDRAY
Sbjct: 421 PFTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVAALNCVILGCANIWDLDRAY 480
Query: 481 QTFEAIGSSFGLTPDIHSYNALMYAFGRLKKTFEAARVFEHLVGLGIKPNARSYSLLVDA 540
QTFEAI SSFGLTPDIHSYNALMYAFG+LKKTFEAARVFEHLV LG+KPNA SYSLLVDA
Sbjct: 481 QTFEAISSSFGLTPDIHSYNALMYAFGKLKKTFEAARVFEHLVSLGVKPNATSYSLLVDA 540
Query: 541 HLINRDPKSALSAIDDMVTAGFVPSREMLKKVRRRCIREQDYDSNDRVDYFAKIFRIRMG 600
HLINRDPKSALS IDDMV AGF PS++MLKKVRRRCIRE DYDSNDRVDY AK F+IRMG
Sbjct: 541 HLINRDPKSALSVIDDMVIAGFAPSKQMLKKVRRRCIREMDYDSNDRVDYQAKSFKIRMG 600
Query: 601 TDKRRDILFMLDYGTDYVA 620
T+ RRD+LF LD+GT+YVA
Sbjct: 601 TENRRDMLFNLDFGTNYVA 618
BLAST of HG10004370 vs. ExPASy TrEMBL
Match:
A0A6J1HEP6 (pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111462853 PE=4 SV=1)
HSP 1 Score: 1117.4 bits (2889), Expect = 0.0e+00
Identity = 553/619 (89.34%), Postives = 591/619 (95.48%), Query Frame = 0
Query: 1 MASKMAILSRTHTLIRTTNLNNVCFFKPISTFTFLSQQPQLANEPVDIPPSTPLPPNPAS 60
MASKMAILSRT T+IR +NLNNVCFFKPI+TFTFLSQ+PQLANEP DI PSTPLPPNPAS
Sbjct: 1 MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADI-PSTPLPPNPAS 60
Query: 61 GSPLYKENWRNPIPNYSMAPSLVPLGLLSQSPSSRIEALSQTLDVQSLLNVFADWMASQR 120
GSPLY ENWRNPIPN S S++PLG L+QSPSSRIEALSQTLDVQSLLNVFADWMASQR
Sbjct: 61 GSPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQR 120
Query: 121 WEDMKQLFEFWIRSLDKDGKPNKPDVNLYNNYLRANLMVNATAGELLDIVAQMEDYAITP 180
WEDMKQLFEFWIRSLDK+GKPNKPDVNLYNNYLRANLMVNA+AGELLD+VAQMEDYAI+P
Sbjct: 121 WEDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISP 180
Query: 181 NTASYNLVLKAMYQARETEAAEKLIESMLQTGEESMPDDESYDIVIGMLLSTDQMDAVLK 240
NTAS+NLVLKAMYQA+ETEAAEKLIE MLQTGEESMPDDESYD+VIGMLLSTDQ+DA LK
Sbjct: 181 NTASFNLVLKAMYQAKETEAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALK 240
Query: 241 YIDLTLKSGHILSLKVFSECVRSCVEKGRLDTLVAVIDRCKTTVQNKALCPPWNLCNYIA 300
YIDLTLKSGH+LSLKVF+ECVRSCV+KGRLDTLV+VIDRCK TVQNKALCP WNLCN+IA
Sbjct: 241 YIDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIA 300
Query: 301 EVATQEDNSKLAYYALEFIAKWIARGENARPPVHLSVDEGLVVSALGTAGRTHSSSLLDA 360
EVATQEDNSKLAYYALEF+A+WIARGENARPPVHLSVDEG+VVSALGTAGRT+SSSLLDA
Sbjct: 301 EVATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDA 360
Query: 361 AWAILKRSLRQKKVPNPESYLGKIYALASFGDLQRAFTTLHEFEEAYRTFDDGAGEEMLS 420
+WAILKRSL QKKVPN ESYLGKIYALASFG+LQRAFTTL EFEEAYRT DDGAGEEM S
Sbjct: 361 SWAILKRSLGQKKVPNLESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFS 420
Query: 421 PFTSLYPLVVACSKKGFETLDTVYFQLENLSSADPPYKSVAALNCVILGCANIWDLDRAY 480
PFTSLYPLVVACSKKGFETLDTVYFQLENLS ADPPYKSV+ALNCVILGCANIWDLDRAY
Sbjct: 421 PFTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAY 480
Query: 481 QTFEAIGSSFGLTPDIHSYNALMYAFGRLKKTFEAARVFEHLVGLGIKPNARSYSLLVDA 540
QTFEAIGSSFGLTPDIHSYNAL+YAFGRLKKTFEAARVFEHLVGLG+KPNA+SYSLLVDA
Sbjct: 481 QTFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDA 540
Query: 541 HLINRDPKSALSAIDDMVTAGFVPSREMLKKVRRRCIREQDYDSNDRVDYFAKIFRIRMG 600
H+INRDPKSALS ID+MVTAGFVPS+EMLKK RRRC+RE DY SND+VDY AK F+IRMG
Sbjct: 541 HIINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDKVDYLAKNFKIRMG 600
Query: 601 TDKRRDILFMLDYGTDYVA 620
T+ RRDILF LDYGT+YVA
Sbjct: 601 TENRRDILFNLDYGTNYVA 618
BLAST of HG10004370 vs. ExPASy TrEMBL
Match:
A0A6J1BQT9 (pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111004896 PE=4 SV=1)
HSP 1 Score: 1115.5 bits (2884), Expect = 0.0e+00
Identity = 551/619 (89.01%), Postives = 590/619 (95.32%), Query Frame = 0
Query: 1 MASKMAILSRTHTLIRTTNLNNVCFFKPISTFTFLSQQPQLANEPVDIPPSTPLPPNPAS 60
MASKMAILSRT TLIRT+NLNNVCFFKPI+TF FLSQ+PQLANEP D+ PSTPLPPNPAS
Sbjct: 1 MASKMAILSRTGTLIRTSNLNNVCFFKPITTFAFLSQEPQLANEPPDL-PSTPLPPNPAS 60
Query: 61 GSPLYKENWRNPIPNYSMAPSLVPLGLLSQSPSSRIEALSQTLDVQSLLNVFADWMASQR 120
GSPLY ENWRNPIPN S+ PSL+PLG L+QSPSSRI+ALSQTLDVQSLLNVFADWMASQR
Sbjct: 61 GSPLYNENWRNPIPNSSLTPSLIPLGFLNQSPSSRIQALSQTLDVQSLLNVFADWMASQR 120
Query: 121 WEDMKQLFEFWIRSLDKDGKPNKPDVNLYNNYLRANLMVNATAGELLDIVAQMEDYAITP 180
WEDMKQLFEFWIRSLDK+GKPNKPDV+LYNNYLRANLMVNATAGELLD+VAQMEDYAI+P
Sbjct: 121 WEDMKQLFEFWIRSLDKNGKPNKPDVSLYNNYLRANLMVNATAGELLDLVAQMEDYAISP 180
Query: 181 NTASYNLVLKAMYQARETEAAEKLIESMLQTGEESMPDDESYDIVIGMLLSTDQMDAVLK 240
NTAS+NLVLKAMY+ARETEAAEKLIE MLQ+GE+SMPDDESYD+VIGMLL+ DQ+DA LK
Sbjct: 181 NTASFNLVLKAMYRARETEAAEKLIERMLQSGEDSMPDDESYDLVIGMLLAMDQIDAALK 240
Query: 241 YIDLTLKSGHILSLKVFSECVRSCVEKGRLDTLVAVIDRCKTTVQNKALCPPWNLCNYIA 300
YIDLTLKSG++LSLKVF+ECVRSC+ KGRLDTLV+VIDRCKTT QNKALCP WNLCNYIA
Sbjct: 241 YIDLTLKSGYMLSLKVFTECVRSCINKGRLDTLVSVIDRCKTTTQNKALCPTWNLCNYIA 300
Query: 301 EVATQEDNSKLAYYALEFIAKWIARGENARPPVHLSVDEGLVVSALGTAGRTHSSSLLDA 360
EVA QEDNSKLAYYALEF+A+WIARGENARPPVHLSVDEG+VVSALGTAGRT+SSSLLDA
Sbjct: 301 EVAMQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGMVVSALGTAGRTYSSSLLDA 360
Query: 361 AWAILKRSLRQKKVPNPESYLGKIYALASFGDLQRAFTTLHEFEEAYRTFDDGAGEEMLS 420
AWAILKRSLRQKKVPNPESYLGKIYALASFG+LQRAFTTLHEFEEAYR DDGAGEEM S
Sbjct: 361 AWAILKRSLRQKKVPNPESYLGKIYALASFGNLQRAFTTLHEFEEAYRNSDDGAGEEMFS 420
Query: 421 PFTSLYPLVVACSKKGFETLDTVYFQLENLSSADPPYKSVAALNCVILGCANIWDLDRAY 480
PFTSLYPLV+ACSKKGFETLDTVYFQLENLS ADPPYKSVAALNCVILGCANIWDLDRAY
Sbjct: 421 PFTSLYPLVMACSKKGFETLDTVYFQLENLSRADPPYKSVAALNCVILGCANIWDLDRAY 480
Query: 481 QTFEAIGSSFGLTPDIHSYNALMYAFGRLKKTFEAARVFEHLVGLGIKPNARSYSLLVDA 540
QTFEAI SSFGLTPDIHSYNALMYAFGRLKKTFEA+RVFEHLV LG+KPNA SYSLLVDA
Sbjct: 481 QTFEAISSSFGLTPDIHSYNALMYAFGRLKKTFEASRVFEHLVSLGVKPNATSYSLLVDA 540
Query: 541 HLINRDPKSALSAIDDMVTAGFVPSREMLKKVRRRCIREQDYDSNDRVDYFAKIFRIRMG 600
HLINRDPKSALSAIDDMV AGF PS+EMLKKVRRRCIRE DYD+NDRVDY AK F+IRMG
Sbjct: 541 HLINRDPKSALSAIDDMVIAGFSPSKEMLKKVRRRCIRELDYDTNDRVDYLAKNFKIRMG 600
Query: 601 TDKRRDILFMLDYGTDYVA 620
T+ R+D+LF LDYGT+YVA
Sbjct: 601 TENRKDMLFNLDYGTNYVA 618
BLAST of HG10004370 vs. ExPASy TrEMBL
Match:
A0A6J1KCV2 (pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111492112 PE=4 SV=1)
HSP 1 Score: 1112.4 bits (2876), Expect = 0.0e+00
Identity = 551/619 (89.01%), Postives = 589/619 (95.15%), Query Frame = 0
Query: 1 MASKMAILSRTHTLIRTTNLNNVCFFKPISTFTFLSQQPQLANEPVDIPPSTPLPPNPAS 60
MASKMAILSRT TLIR +NLNNVCFFKPI+TFTFLSQ+PQLANEP DI PSTPLPPNPAS
Sbjct: 1 MASKMAILSRTQTLIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADI-PSTPLPPNPAS 60
Query: 61 GSPLYKENWRNPIPNYSMAPSLVPLGLLSQSPSSRIEALSQTLDVQSLLNVFADWMASQR 120
GSPLY ENWRNPIPN S S++PLG L+QSPSSRIEALSQTLDVQSLLNVFADWMASQR
Sbjct: 61 GSPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQR 120
Query: 121 WEDMKQLFEFWIRSLDKDGKPNKPDVNLYNNYLRANLMVNATAGELLDIVAQMEDYAITP 180
WEDMKQLFEFWIRSLDK+GKPNKPDVNLYNNYLRANLMVNA+AGELL++VAQMEDYAI+P
Sbjct: 121 WEDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLNLVAQMEDYAISP 180
Query: 181 NTASYNLVLKAMYQARETEAAEKLIESMLQTGEESMPDDESYDIVIGMLLSTDQMDAVLK 240
NTAS+NLVLKAMYQA+ETEAAEKLIE MLQTGEESMPDDESYD+VIGMLLSTDQ+DA LK
Sbjct: 181 NTASFNLVLKAMYQAKETEAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALK 240
Query: 241 YIDLTLKSGHILSLKVFSECVRSCVEKGRLDTLVAVIDRCKTTVQNKALCPPWNLCNYIA 300
YIDLTLKSGHILSLKVF+ECVRSCV+KGRLDTLV+VIDRCK TVQNKALCP WNLCNYI
Sbjct: 241 YIDLTLKSGHILSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNYIV 300
Query: 301 EVATQEDNSKLAYYALEFIAKWIARGENARPPVHLSVDEGLVVSALGTAGRTHSSSLLDA 360
EVATQEDNSKLAYYALEF+A+WIARGENAR PVHLSVDEG+VVSALGTAGRT+SSSLLDA
Sbjct: 301 EVATQEDNSKLAYYALEFMARWIARGENARSPVHLSVDEGIVVSALGTAGRTYSSSLLDA 360
Query: 361 AWAILKRSLRQKKVPNPESYLGKIYALASFGDLQRAFTTLHEFEEAYRTFDDGAGEEMLS 420
+WAILKRSL QKKVPNPESYLGKIYALASFG+LQRAFTTL EFEEAYRT DDGAGEEM S
Sbjct: 361 SWAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTSDDGAGEEMFS 420
Query: 421 PFTSLYPLVVACSKKGFETLDTVYFQLENLSSADPPYKSVAALNCVILGCANIWDLDRAY 480
PFTSLYPLVVACSKKGFETLDTVYFQLENLS ADPPYKSV+ALNCVILGCANIWDLDRAY
Sbjct: 421 PFTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAY 480
Query: 481 QTFEAIGSSFGLTPDIHSYNALMYAFGRLKKTFEAARVFEHLVGLGIKPNARSYSLLVDA 540
QTFE IGSSFGLTPDIHSYNAL+YAFGRLKKTF AARVFEHLVGLG+KPNA+SYSLLVDA
Sbjct: 481 QTFEEIGSSFGLTPDIHSYNALIYAFGRLKKTFAAARVFEHLVGLGVKPNAKSYSLLVDA 540
Query: 541 HLINRDPKSALSAIDDMVTAGFVPSREMLKKVRRRCIREQDYDSNDRVDYFAKIFRIRMG 600
H+INR+PKS+LS ID+MVTAGFVPS+EMLKKVRRRC+RE DY SND+VDY AK F+IRMG
Sbjct: 541 HIINRNPKSSLSVIDNMVTAGFVPSKEMLKKVRRRCMREMDYPSNDKVDYLAKNFKIRMG 600
Query: 601 TDKRRDILFMLDYGTDYVA 620
T+ RRDILF LDYGT+YVA
Sbjct: 601 TENRRDILFNLDYGTNYVA 618
BLAST of HG10004370 vs. TAIR 10
Match:
AT1G26460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 823.5 bits (2126), Expect = 1.1e-238
Identity = 414/623 (66.45%), Postives = 498/623 (79.94%), Query Frame = 0
Query: 1 MASKMAILSRTHTLIRTTNLNNVCFFKPISTFT---FLSQQPQLANEPVDIPP------S 60
MAS + SR +L++T N PI + FLSQ P LA E D P S
Sbjct: 1 MASHLFTRSRI-SLLKTLKPNPFTSASPIRAISGTPFLSQDPLLATESTDHDPSNHQSTS 60
Query: 61 TPLPPNPASGSPLYKENWRNPIPNY-SMAPSLVPLGLLSQSPSSRIEALSQTLDVQSLLN 120
TPLPPNPA+GSPLY+ENWR+PIPN S SLVPLG L+Q+P+ RI ALS+TLD+ SLLN
Sbjct: 61 TPLPPNPATGSPLYQENWRSPIPNTPSFNQSLVPLGFLNQAPAPRIRALSETLDMNSLLN 120
Query: 121 VFADWMASQRWEDMKQLFEFWIRSLDKDGKPNKPDVNLYNNYLRANLMVNATAGELLDIV 180
+FADW ASQRW DMKQLFE W+RSLDK+GKPNKPDVNLYN+YLRANLM+ A+AG++LD+V
Sbjct: 121 MFADWTASQRWSDMKQLFEVWVRSLDKNGKPNKPDVNLYNHYLRANLMMGASAGDMLDLV 180
Query: 181 AQMEDYAITPNTASYNLVLKAMYQARETEAAEKLIESMLQTGEESMPDDESYDIVIGMLL 240
A ME++++ PNTASYNLVLKAMYQARETEAA KL+E ML G++S+PDDESYD+VIGM
Sbjct: 181 APMEEFSVEPNTASYNLVLKAMYQARETEAAMKLLERMLLLGKDSLPDDESYDLVIGMHF 240
Query: 241 STDQMDAVLKYIDLTLKSGHILSLKVFSECVRSCVEKGRLDTLVAVIDRCKTTVQNKALC 300
+ D +K +D LKSG++LS VF+ECVRSCV KGR DTLV++I+RCK +NK+LC
Sbjct: 241 GVGKNDEAMKVMDTALKSGYMLSTSVFTECVRSCVAKGRTDTLVSIIERCKAVDRNKSLC 300
Query: 301 PPWNLCNYIAEVATQEDNSKLAYYALEFIAKWIARGENARPPVHLSVDEGLVVSALGTAG 360
P W LCNYIAEVA QEDNSKLA+YA EF+ KWI RGE ARP V SVDEGLVV+ L +A
Sbjct: 301 PSWILCNYIAEVAIQEDNSKLAFYAFEFMFKWITRGEMARPSVIFSVDEGLVVAGLASAA 360
Query: 361 RTHSSSLLDAAWAILKRSLRQKKVPNPESYLGKIYALASFGDLQRAFTTLHEFEEAYRTF 420
RT SSSL++ +W ILK+SLR +K NP SY+ KI A AS G+LQ+AFT+LHE E AY
Sbjct: 361 RTCSSSLVEGSWTILKQSLRGRKAANPASYIAKINAYASLGNLQKAFTSLHELESAYADS 420
Query: 421 DDGAGEEMLSPFTSLYPLVVACSKKGFETLDTVYFQLENLSSADPPYKSVAALNCVILGC 480
+ EEMLSPFTSLYPLVVACSKKGFETLD VYFQLE+LS D PYKSVAALNC+ILGC
Sbjct: 421 EKEVVEEMLSPFTSLYPLVVACSKKGFETLDEVYFQLESLSQGDTPYKSVAALNCIILGC 480
Query: 481 ANIWDLDRAYQTFEAIGSSFGLTPDIHSYNALMYAFGRLKKTFEAARVFEHLVGLGIKPN 540
AN WDLDRAYQTFEAI +SFGLTP+I SYNAL+YAFG++KKTFEA VFEHLV +G+KP+
Sbjct: 481 ANTWDLDRAYQTFEAISASFGLTPNIDSYNALLYAFGKVKKTFEATNVFEHLVSIGVKPD 540
Query: 541 ARSYSLLVDAHLINRDPKSALSAIDDMVTAGFVPSREMLKKVRRRCIREQDYDSNDRVDY 600
+R+YSLLVDAHLINRDPKSAL+ +DDM+ AGF PSRE LKK+RRRC+RE D +++D+V+
Sbjct: 541 SRTYSLLVDAHLINRDPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDDENDDQVEA 600
Query: 601 FAKIFRIRMGTDKRRDILFMLDY 614
AK F+IRMG++ RR++LF +DY
Sbjct: 601 LAKKFQIRMGSENRRNMLFNIDY 622
BLAST of HG10004370 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 67.8 bits (164), Expect = 3.5e-11
Identity = 85/428 (19.86%), Postives = 167/428 (39.02%), Query Frame = 0
Query: 144 PDVNLYNNYLRANLMVNATAGELLDIVAQMEDYAITPNTASYNLVLKAMYQARETEAAEK 203
P V YN L A + ++ +M + ++PN +YN++++ A + A
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 204 LIESMLQTGEESMPDDESYDIVIGMLLSTDQMDAVLKYIDLTLKSGHILSLKVFSECVRS 263
L + M G +P+ +Y+ +I ++D K + G +L ++ +
Sbjct: 227 LFDKMETKG--CLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 286
Query: 264 CVEKGRLDTLVAVIDRCKTTVQNKALCPPWNLCNYIAEVATQEDNSKLAYYALE--FIAK 323
+GR+ + V+ N Y + T N+ + Y E F
Sbjct: 287 LCREGRMKEVSFVLTE-------------MNRRGYSLDEVTY--NTLIKGYCKEGNFHQA 346
Query: 324 WIARGENARPPVHLSVDEGLVVSALGTAGRTHS---SSLLDAAWAILKRSLRQKKVPNPE 383
+ E R GL S + HS + ++ A L + + PN
Sbjct: 347 LVMHAEMLR--------HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 406
Query: 384 SYLGKIYALASFGDLQRAFTTLHEFEEAYRTFDDGAGEEMLSPFTSLYPLVV--ACSKKG 443
+Y + + G + A+ L E D+G SP Y ++ C
Sbjct: 407 TYTTLVDGFSQKGYMNEAYRVLREMN------DNG-----FSPSVVTYNALINGHCVTGK 466
Query: 444 FETLDTVYFQLENLSSADPPYKSVAALNCVILGCANIWDLDRAYQTFEAIGSSFGLTPDI 503
E V ++ + V + + V+ G +D+D A + + G+ PD
Sbjct: 467 MEDAIAVLEDMKEKGLS----PDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDT 526
Query: 504 HSYNALMYAFGRLKKTFEAARVFEHLVGLGIKPNARSYSLLVDAHLINRDPKSALSAIDD 563
+Y++L+ F ++T EA ++E ++ +G+ P+ +Y+ L++A+ + D + AL ++
Sbjct: 527 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 553
Query: 564 MVTAGFVP 565
MV G +P
Sbjct: 587 MVEKGVLP 553
BLAST of HG10004370 vs. TAIR 10
Match:
AT4G31850.1 (proton gradient regulation 3 )
HSP 1 Score: 65.5 bits (158), Expect = 1.8e-10
Identity = 35/132 (26.52%), Postives = 66/132 (50.00%), Query Frame = 0
Query: 444 YFQLENLSSADPPYKSVAALNCVILGCANIWDLDRAYQTFEAIGSSFGLTPDIHSYNALM 503
YF+ S +P V N +I G L+ A F + +S G+TPD+++YN+L+
Sbjct: 983 YFKELKESGLNP---DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1042
Query: 504 YAFGRLKKTFEAARVFEHLVGLGIKPNARSYSLLVDAHLINRDPKSALSAIDDMVTAGFV 563
G EA +++ + G++PN +++ L+ + ++ P+ A + MVT GF
Sbjct: 1043 LNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFS 1102
Query: 564 PSREMLKKVRRR 576
P+ +++ R
Sbjct: 1103 PNTGTYEQLPNR 1111
BLAST of HG10004370 vs. TAIR 10
Match:
AT3G06920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 63.9 bits (154), Expect = 5.1e-10
Identity = 86/434 (19.82%), Postives = 162/434 (37.33%), Query Frame = 0
Query: 180 PNTASYNLVLKAMYQARETEAAEKLIESMLQTGEESMPDDESYDIVIGMLLSTDQMDAVL 239
P+ +YN +L + + + + A K+ E M +++ P+ +Y+I+I ML ++D
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEM---KKDAAPNLSTYNILIDMLCRAGKLDTAF 400
Query: 240 KYIDLTLKSGHILSLKVFSECVRSCVEKGRLDTLVAVIDRCKTTVQNKALCPPWNLCNYI 299
+ D K+G +++ + V + +LD A+ + V +L + +
Sbjct: 401 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 460
Query: 300 AEVATQEDNSKLAYYALE------------FIAKWIARG--------------ENARPPV 359
+V +D K+ L+ I + G +N P +
Sbjct: 461 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 520
Query: 360 HLSVDEGLVVSALGTAGRTHSSSLLDAAWAILKRSLRQKKVPNPESYLGKIYALASFGDL 419
L + + AG A+ + ++ VP+ SY I+ L G
Sbjct: 521 QLL---NTYMDCMFKAGEPEKGR------AMFEEIKARRFVPDARSYSILIHGLIKAGFA 580
Query: 420 QRAFTTLHEFEEAYRTFDDGAGEEMLSPF------TSLYPLVVACSKKGFE----TLDTV 479
+ + +E D A ++ F Y L+ KGFE T +V
Sbjct: 581 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 640
Query: 480 YFQLENLSSADPPYK------------SVAALNCVILGCANIWDLDRAYQTFEAIGSSFG 539
L + D Y +V + +I G + +D AY E + G
Sbjct: 641 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK-G 700
Query: 540 LTPDIHSYNALMYAFGRLKKTFEAARVFEHLVGLGIKPNARSYSLLVDAHLINRDPKSAL 566
LTP+++++N+L+ A + ++ EA F+ + L PN +Y +L++ R A
Sbjct: 701 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 760
BLAST of HG10004370 vs. TAIR 10
Match:
AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 59.7 bits (143), Expect = 9.6e-09
Identity = 54/226 (23.89%), Postives = 88/226 (38.94%), Query Frame = 0
Query: 358 LDAAWAILKRSLRQKKVPNPESYLGKIYALASFGDLQRAFTTLHEF-----EEAYRTFDD 417
+D+A ++L+ + VPN Y I++L+ + A L E TF+D
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 418 G-AGEEMLSPFTSLYPLVVACSKKGFETLDTVYFQLEN----LSSADP--------PYKS 477
G +V +GF D Y L N + D P
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 478 VAALNCVILGCANIWDLDRAYQTFEAIGSSFGLTPDIHSYNALMYAFGRLKKTFEAARVF 537
+ N +I G LD A + +S+G+ PD+ +YN+L+Y + + A V
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 538 EHLVGLGIKPNARSYSLLVDAHLINRDPKSALSAIDDMVTAGFVPS 566
+ G KPN SY++LVD A + +++M G P+
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023546997.1 | 0.0e+00 | 89.82 | pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like [Cucur... | [more] |
KAG7029573.1 | 0.0e+00 | 89.34 | Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosper... | [more] |
XP_023002111.1 | 0.0e+00 | 89.66 | pentatricopeptide repeat-containing protein At1g26460, mitochondrial [Cucurbita ... | [more] |
XP_023537323.1 | 0.0e+00 | 89.34 | pentatricopeptide repeat-containing protein At1g26460, mitochondrial [Cucurbita ... | [more] |
KAG7020167.1 | 0.0e+00 | 89.34 | Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosper... | [more] |
Match Name | E-value | Identity | Description | |
Q9FZD1 | 1.5e-237 | 66.45 | Pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Arabidop... | [more] |
Q9FIX3 | 5.0e-10 | 19.86 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Q9SZ52 | 2.5e-09 | 26.52 | Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop... | [more] |
Q9M907 | 7.2e-09 | 19.82 | Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX... | [more] |
Q9FMF6 | 1.4e-07 | 23.89 | Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1KIJ9 | 0.0e+00 | 89.66 | pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Cucurbit... | [more] |
A0A6J1GHH4 | 0.0e+00 | 89.66 | pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Cucurbit... | [more] |
A0A6J1HEP6 | 0.0e+00 | 89.34 | pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like OS=Cuc... | [more] |
A0A6J1BQT9 | 0.0e+00 | 89.01 | pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Momordic... | [more] |
A0A6J1KCV2 | 0.0e+00 | 89.01 | pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like OS=Cuc... | [more] |
Match Name | E-value | Identity | Description | |
AT1G26460.1 | 1.1e-238 | 66.45 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G39710.1 | 3.5e-11 | 19.86 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G31850.1 | 1.8e-10 | 26.52 | proton gradient regulation 3 | [more] |
AT3G06920.1 | 5.1e-10 | 19.82 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G64320.1 | 9.6e-09 | 23.89 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |