HG10004120 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004120
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein GL2-INTERACTING REPRESSOR 1
Location	Chr08: 13890025 .. 13890854 (-)
RNA-Seq Expression	HG10004120
Synteny	HG10004120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCAAAACCTCAGGAAACCACTCAATATCTGGAGCATGCTGGTGATGCAAAGGATTGCGGTGGTGGTGACCTAGAGAGCTGTGCTCGTAGCCCCGAGGATTTCTCCTTGAGTGTCGATCAACTCAATCAAGACTTTAACAAATCTCTTGTTCTTAAAAGTTCATCCTCAATTGAATTAAAGGATAGTTCTAATCTGACGACTATGAAGCAATCAGAAGTTCCTGACAAGGTATATTCTTTTCCAACTAGTAAATATCCTAATCTGTGTTGGATTTTTTTCCCTAAATGATTTTGTTAGTCTTCTTTTAATCTTGTTATTTTTTCCCTTTACCAGGAAGATTATGATCTCTTTCCTTTCCCCAAATAAATCTTTTAACCTATTAAGGAAAAATCTACACATAATTTAGGTGAATGCTAATGTATTTCCTATTTCTTGTGGGGTGGTTCTGGAAAAAATTCCAAAAGAAGGAAACTAAAAGAAGGTATGCTGTGGAACTGGAAACGGCTGCGAATGAAAATGATGCATATTTGGATCTCAAACTGTCACCTCCAGGGGTCTACTCAAAGGGTAAATCGTCAAATGAATCGAAATCGTCATCCCCAAGATCTCAAGACTCATGCATATCTGCAGAGGTCGAGTCAAACGTGAACTCGGAGAATAATAACCTTCGAGTTGAAAGTTCACCGTTGATCGTGATGGGATGTACTTTTTGCCTGCTTTATGTGATGGTGACAGATGCAGATCCCAGATGCCCTAAATGCAAAAATCCTGGCTTGCTCGACGTTTTCCGTGGAAATCAGGTGAAGAGATCGAGAAAGAAATAG

mRNA sequence

ATGGGTTCAAAACCTCAGGAAACCACTCAATATCTGGAGCATGCTGGTGATGCAAAGGATTGCGGTGGTGGTGACCTAGAGAGCTGTGCTCGTAGCCCCGAGGATTTCTCCTTGAGTGTCGATCAACTCAATCAAGACTTTAACAAATCTCTTGTTCTTAAAAGTTCATCCTCAATTGAATTAAAGGATAGTTCTAATCTGACGACTATGAAGCAATCAGAAGTTCCTGACAAGAAGGAAACTAAAAGAAGGTATGCTGTGGAACTGGAAACGGCTGCGAATGAAAATGATGCATATTTGGATCTCAAACTGTCACCTCCAGGGGTCTACTCAAAGGGTAAATCGTCAAATGAATCGAAATCGTCATCCCCAAGATCTCAAGACTCATGCATATCTGCAGAGGTCGAGTCAAACGTGAACTCGGAGAATAATAACCTTCGAGTTGAAAGTTCACCGTTGATCGTGATGGGATGTACTTTTTGCCTGCTTTATGTGATGGTGACAGATGCAGATCCCAGATGCCCTAAATGCAAAAATCCTGGCTTGCTCGACGTTTTCCGTGGAAATCAGGTGAAGAGATCGAGAAAGAAATAG

Coding sequence (CDS)

ATGGGTTCAAAACCTCAGGAAACCACTCAATATCTGGAGCATGCTGGTGATGCAAAGGATTGCGGTGGTGGTGACCTAGAGAGCTGTGCTCGTAGCCCCGAGGATTTCTCCTTGAGTGTCGATCAACTCAATCAAGACTTTAACAAATCTCTTGTTCTTAAAAGTTCATCCTCAATTGAATTAAAGGATAGTTCTAATCTGACGACTATGAAGCAATCAGAAGTTCCTGACAAGAAGGAAACTAAAAGAAGGTATGCTGTGGAACTGGAAACGGCTGCGAATGAAAATGATGCATATTTGGATCTCAAACTGTCACCTCCAGGGGTCTACTCAAAGGGTAAATCGTCAAATGAATCGAAATCGTCATCCCCAAGATCTCAAGACTCATGCATATCTGCAGAGGTCGAGTCAAACGTGAACTCGGAGAATAATAACCTTCGAGTTGAAAGTTCACCGTTGATCGTGATGGGATGTACTTTTTGCCTGCTTTATGTGATGGTGACAGATGCAGATCCCAGATGCCCTAAATGCAAAAATCCTGGCTTGCTCGACGTTTTCCGTGGAAATCAGGTGAAGAGATCGAGAAAGAAATAG

Protein sequence

MGSKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSNLTTMKQSEVPDKKETKRRYAVELETAANENDAYLDLKLSPPGVYSKGKSSNESKSSSPRSQDSCISAEVESNVNSENNNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKNPGLLDVFRGNQVKRSRKK

Homology

[Close]

BLAST of HG10004120 vs. NCBI nr
Match: XP_038885898.1 (uncharacterized protein LOC120076204 [Benincasa hispida])

HSP 1 Score: 351.3 bits (900), Expect = 5.5e-93
Identity = 183/190 (96.32%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 7   ETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSN 66
           ETTQYLEHAGDAKDCGG DLESCARSPEDFSLSVDQLNQDFNKSLVLK+SSSIELKDSSN
Sbjct: 84  ETTQYLEHAGDAKDCGGDDLESCARSPEDFSLSVDQLNQDFNKSLVLKNSSSIELKDSSN 143

Query: 67  LTTMKQSEVPDKKETKRRYAVELETAANENDAYLDLKLSPPGVYSKGKSSNESKSSSPRS 126
           L TMKQSEVPDKKETKRRYAVE+ TAANENDAYLDLKLSPPGVYS+GK SNESKSSSPRS
Sbjct: 144 L-TMKQSEVPDKKETKRRYAVEMGTAANENDAYLDLKLSPPGVYSRGKLSNESKSSSPRS 203

Query: 127 QDSCISAEVESNVNSENNNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKNPGLLDVF 186
           QDSCISAEVESNVNSENNNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKNPGLLDVF
Sbjct: 204 QDSCISAEVESNVNSENNNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKNPGLLDVF 263

Query: 187 RGNQVKRSRK 197
           RGNQVKRSRK
Sbjct: 264 RGNQVKRSRK 272

[Close]

BLAST of HG10004120 vs. NCBI nr
Match: TYK11779.1 (uncharacterized protein E5676_scaffold304G001060 [Cucumis melo var. makuwa])

HSP 1 Score: 312.0 bits (798), Expect = 3.7e-81
Identity = 169/196 (86.22%), Postives = 174/196 (88.78%), Query Frame = 0


Query: 1   MGSKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIE 60
           MGSK Q+TTQYLEHA  AKDC G DLES   SPEDFSLSVDQLNQDFNKSLVLK SSSIE
Sbjct: 1   MGSKSQDTTQYLEHADAAKDCCGDDLESGVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIE 60

Query: 61  LKDSSNLTTMKQSEVPDKKETKRRYAVELETAANENDAYLDLKLSPPGVYSKGKSSNESK 120
           LKDSSNLT MK     DKKETKRRYAVE  TAANENDAYLDLKLSPPGVYS+GKSSNESK
Sbjct: 61  LKDSSNLTMMKSE--TDKKETKRRYAVETGTAANENDAYLDLKLSPPGVYSRGKSSNESK 120

Query: 121 SSSPRSQDSCISAEVESNVNSENNNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKNP 180
           SSSP SQDSCISAEVESN+NSE +NLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCK  
Sbjct: 121 SSSPSSQDSCISAEVESNLNSE-DNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRS 180

Query: 181 GLLDVFRGNQVKRSRK 197
           GLLD FRGNQ+KRSRK
Sbjct: 181 GLLDAFRGNQLKRSRK 193

[Close]

BLAST of HG10004120 vs. NCBI nr
Match: XP_011656573.1 (uncharacterized protein LOC105435753 isoform X1 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 8.2e-81
Identity = 168/196 (85.71%), Postives = 174/196 (88.78%), Query Frame = 0


Query: 1   MGSKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIE 60
           MGSKPQ+TTQYLEHA  AKDC G DLES   SPEDFSLSVDQLNQDFNKSLVLK SSSIE
Sbjct: 1   MGSKPQDTTQYLEHADAAKDCCGDDLESDVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIE 60

Query: 61  LKDSSNLTTMKQSEVPDKKETKRRYAVELETAANENDAYLDLKLSPPGVYSKGKSSNESK 120
           LKDSS+ T MK     DKKETKRRYAVE  TAAN+NDAYLDLKLSPPGVYS+GKSSNESK
Sbjct: 61  LKDSSSQTMMKSD--TDKKETKRRYAVETGTAANQNDAYLDLKLSPPGVYSRGKSSNESK 120

Query: 121 SSSPRSQDSCISAEVESNVNSENNNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKNP 180
           SSSPRSQDSCISAEVESN+N E +NLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCK  
Sbjct: 121 SSSPRSQDSCISAEVESNLNLE-DNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRS 180

Query: 181 GLLDVFRGNQVKRSRK 197
           GLLD FRGNQVKRSRK
Sbjct: 181 GLLDAFRGNQVKRSRK 193

[Close]

BLAST of HG10004120 vs. NCBI nr
Match: XP_008456616.1 (PREDICTED: uncharacterized protein LOC103496521 isoform X4 [Cucumis melo] >XP_008456617.1 PREDICTED: uncharacterized protein LOC103496521 isoform X4 [Cucumis melo])

HSP 1 Score: 307.0 bits (785), Expect = 1.2e-79
Identity = 166/194 (85.57%), Postives = 172/194 (88.66%), Query Frame = 0


Query: 3   SKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELK 62
           +KP +TTQYLEHA  AKDC G DLES   SPEDFSLSVDQLNQDFNKSLVLK SSSIELK
Sbjct: 2   TKPLDTTQYLEHADAAKDCCGDDLESGVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIELK 61

Query: 63  DSSNLTTMKQSEVPDKKETKRRYAVELETAANENDAYLDLKLSPPGVYSKGKSSNESKSS 122
           DSSNLT MK     DKKETKRRYAVE  TAANENDAYLDLKLSPPGVYS+GKSSNESKSS
Sbjct: 62  DSSNLTMMKSE--TDKKETKRRYAVETGTAANENDAYLDLKLSPPGVYSRGKSSNESKSS 121

Query: 123 SPRSQDSCISAEVESNVNSENNNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKNPGL 182
           SP SQDSCISAEVESN+NSE +NLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCK  GL
Sbjct: 122 SPSSQDSCISAEVESNLNSE-DNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGL 181

Query: 183 LDVFRGNQVKRSRK 197
           LD FRGNQ+KRSRK
Sbjct: 182 LDAFRGNQLKRSRK 192

[Close]

BLAST of HG10004120 vs. NCBI nr
Match: XP_008456614.1 (PREDICTED: uncharacterized protein LOC103496521 isoform X3 [Cucumis melo] >XP_008456615.1 PREDICTED: uncharacterized protein LOC103496521 isoform X3 [Cucumis melo])

HSP 1 Score: 302.8 bits (774), Expect = 2.2e-78
Identity = 164/190 (86.32%), Postives = 169/190 (88.95%), Query Frame = 0


Query: 7   ETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSN 66
           +TTQYLEHA  AKDC G DLES   SPEDFSLSVDQLNQDFNKSLVLK SSSIELKDSSN
Sbjct: 10  DTTQYLEHADAAKDCCGDDLESGVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIELKDSSN 69

Query: 67  LTTMKQSEVPDKKETKRRYAVELETAANENDAYLDLKLSPPGVYSKGKSSNESKSSSPRS 126
           LT MK     DKKETKRRYAVE  TAANENDAYLDLKLSPPGVYS+GKSSNESKSSSP S
Sbjct: 70  LTMMKSE--TDKKETKRRYAVETGTAANENDAYLDLKLSPPGVYSRGKSSNESKSSSPSS 129

Query: 127 QDSCISAEVESNVNSENNNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKNPGLLDVF 186
           QDSCISAEVESN+NSE +NLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCK  GLLD F
Sbjct: 130 QDSCISAEVESNLNSE-DNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDAF 189

Query: 187 RGNQVKRSRK 197
           RGNQ+KRSRK
Sbjct: 190 RGNQLKRSRK 196

[Close]

BLAST of HG10004120 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.7e-09
Identity = 35/93 (37.63%), Postives = 57/93 (61.29%), Query Frame = 0


Query: 100 LDLKLSPPGVYSKG--KSSNESKSSSPRS-QDSCISAEVESNVNSENNNLRVESSPLIVM 159
           L L LSPP    +   +S + S ++SP S   SC+S+E+  +  S   +   E++ ++++
Sbjct: 10  LKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETTSMVLV 69

Query: 160 GCTFCLLYVMVTDADPRCPKCKNPGLLDVFRGN 190
           GC  CL+YVM+++ DP+CPKCK+  LLD    N
Sbjct: 70  GCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHEN 102

[Close]

BLAST of HG10004120 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.5e-08
Identity = 40/102 (39.22%), Postives = 59/102 (57.84%), Query Frame = 0


Query: 94  NENDAYLDLK--LSPP----GVYSKGKSSNESKSSSPRSQDSCISAEVESNVNSENNNLR 153
           N+N   L+L+  LSPP       S  +S N S ++SP    SC+S+E     N E N   
Sbjct: 5   NKNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSP---SSCVSSE----TNQEENE-- 64

Query: 154 VESSPLIVMGCTFCLLYVMVTDADPRCPKCKNPGLLDVFRGN 190
              + ++++GC  CL+YVM++D DP+CPKCK+  LLD  + N
Sbjct: 65  -TITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQEN 96

[Close]

BLAST of HG10004120 vs. ExPASy TrEMBL
Match: A0A5D3CNF7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G001060 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.8e-81
Identity = 169/196 (86.22%), Postives = 174/196 (88.78%), Query Frame = 0


Query: 1   MGSKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIE 60
           MGSK Q+TTQYLEHA  AKDC G DLES   SPEDFSLSVDQLNQDFNKSLVLK SSSIE
Sbjct: 1   MGSKSQDTTQYLEHADAAKDCCGDDLESGVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIE 60

Query: 61  LKDSSNLTTMKQSEVPDKKETKRRYAVELETAANENDAYLDLKLSPPGVYSKGKSSNESK 120
           LKDSSNLT MK     DKKETKRRYAVE  TAANENDAYLDLKLSPPGVYS+GKSSNESK
Sbjct: 61  LKDSSNLTMMKSE--TDKKETKRRYAVETGTAANENDAYLDLKLSPPGVYSRGKSSNESK 120

Query: 121 SSSPRSQDSCISAEVESNVNSENNNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKNP 180
           SSSP SQDSCISAEVESN+NSE +NLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCK  
Sbjct: 121 SSSPSSQDSCISAEVESNLNSE-DNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRS 180

Query: 181 GLLDVFRGNQVKRSRK 197
           GLLD FRGNQ+KRSRK
Sbjct: 181 GLLDAFRGNQLKRSRK 193

[Close]

BLAST of HG10004120 vs. ExPASy TrEMBL
Match: A0A0A0KE76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046290 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 4.0e-81
Identity = 168/196 (85.71%), Postives = 174/196 (88.78%), Query Frame = 0


Query: 1   MGSKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIE 60
           MGSKPQ+TTQYLEHA  AKDC G DLES   SPEDFSLSVDQLNQDFNKSLVLK SSSIE
Sbjct: 1   MGSKPQDTTQYLEHADAAKDCCGDDLESDVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIE 60

Query: 61  LKDSSNLTTMKQSEVPDKKETKRRYAVELETAANENDAYLDLKLSPPGVYSKGKSSNESK 120
           LKDSS+ T MK     DKKETKRRYAVE  TAAN+NDAYLDLKLSPPGVYS+GKSSNESK
Sbjct: 61  LKDSSSQTMMKSD--TDKKETKRRYAVETGTAANQNDAYLDLKLSPPGVYSRGKSSNESK 120

Query: 121 SSSPRSQDSCISAEVESNVNSENNNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKNP 180
           SSSPRSQDSCISAEVESN+N E +NLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCK  
Sbjct: 121 SSSPRSQDSCISAEVESNLNLE-DNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRS 180

Query: 181 GLLDVFRGNQVKRSRK 197
           GLLD FRGNQVKRSRK
Sbjct: 181 GLLDAFRGNQVKRSRK 193

[Close]

BLAST of HG10004120 vs. ExPASy TrEMBL
Match: A0A1S3C4Y0 (uncharacterized protein LOC103496521 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103496521 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 5.7e-80
Identity = 166/194 (85.57%), Postives = 172/194 (88.66%), Query Frame = 0


Query: 3   SKPQETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELK 62
           +KP +TTQYLEHA  AKDC G DLES   SPEDFSLSVDQLNQDFNKSLVLK SSSIELK
Sbjct: 2   TKPLDTTQYLEHADAAKDCCGDDLESGVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIELK 61

Query: 63  DSSNLTTMKQSEVPDKKETKRRYAVELETAANENDAYLDLKLSPPGVYSKGKSSNESKSS 122
           DSSNLT MK     DKKETKRRYAVE  TAANENDAYLDLKLSPPGVYS+GKSSNESKSS
Sbjct: 62  DSSNLTMMKSE--TDKKETKRRYAVETGTAANENDAYLDLKLSPPGVYSRGKSSNESKSS 121

Query: 123 SPRSQDSCISAEVESNVNSENNNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKNPGL 182
           SP SQDSCISAEVESN+NSE +NLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCK  GL
Sbjct: 122 SPSSQDSCISAEVESNLNSE-DNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGL 181

Query: 183 LDVFRGNQVKRSRK 197
           LD FRGNQ+KRSRK
Sbjct: 182 LDAFRGNQLKRSRK 192

[Close]

BLAST of HG10004120 vs. ExPASy TrEMBL
Match: A0A1S3C4C1 (uncharacterized protein LOC103496521 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496521 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.1e-78
Identity = 164/190 (86.32%), Postives = 169/190 (88.95%), Query Frame = 0


Query: 7   ETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSN 66
           +TTQYLEHA  AKDC G DLES   SPEDFSLSVDQLNQDFNKSLVLK SSSIELKDSSN
Sbjct: 10  DTTQYLEHADAAKDCCGDDLESGVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIELKDSSN 69

Query: 67  LTTMKQSEVPDKKETKRRYAVELETAANENDAYLDLKLSPPGVYSKGKSSNESKSSSPRS 126
           LT MK     DKKETKRRYAVE  TAANENDAYLDLKLSPPGVYS+GKSSNESKSSSP S
Sbjct: 70  LTMMKSE--TDKKETKRRYAVETGTAANENDAYLDLKLSPPGVYSRGKSSNESKSSSPSS 129

Query: 127 QDSCISAEVESNVNSENNNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKNPGLLDVF 186
           QDSCISAEVESN+NSE +NLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCK  GLLD F
Sbjct: 130 QDSCISAEVESNLNSE-DNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDAF 189

Query: 187 RGNQVKRSRK 197
           RGNQ+KRSRK
Sbjct: 190 RGNQLKRSRK 196

[Close]

BLAST of HG10004120 vs. ExPASy TrEMBL
Match: A0A1S3C387 (uncharacterized protein LOC103496521 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496521 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.1e-78
Identity = 164/190 (86.32%), Postives = 169/190 (88.95%), Query Frame = 0


Query: 7   ETTQYLEHAGDAKDCGGGDLESCARSPEDFSLSVDQLNQDFNKSLVLKSSSSIELKDSSN 66
           +TTQYLEHA  AKDC G DLES   SPEDFSLSVDQLNQDFNKSLVLK SSSIELKDSSN
Sbjct: 14  DTTQYLEHADAAKDCCGDDLESGVHSPEDFSLSVDQLNQDFNKSLVLKGSSSIELKDSSN 73

Query: 67  LTTMKQSEVPDKKETKRRYAVELETAANENDAYLDLKLSPPGVYSKGKSSNESKSSSPRS 126
           LT MK     DKKETKRRYAVE  TAANENDAYLDLKLSPPGVYS+GKSSNESKSSSP S
Sbjct: 74  LTMMKSE--TDKKETKRRYAVETGTAANENDAYLDLKLSPPGVYSRGKSSNESKSSSPSS 133

Query: 127 QDSCISAEVESNVNSENNNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKNPGLLDVF 186
           QDSCISAEVESN+NSE +NLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCK  GLLD F
Sbjct: 134 QDSCISAEVESNLNSE-DNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKRSGLLDAF 193

Query: 187 RGNQVKRSRK 197
           RGNQ+KRSRK
Sbjct: 194 RGNQLKRSRK 200

[Close]

BLAST of HG10004120 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 4.7e-10
Identity = 35/93 (37.63%), Postives = 57/93 (61.29%), Query Frame = 0


Query: 100 LDLKLSPPGVYSKG--KSSNESKSSSPRS-QDSCISAEVESNVNSENNNLRVESSPLIVM 159
           L L LSPP    +   +S + S ++SP S   SC+S+E+  +  S   +   E++ ++++
Sbjct: 10  LKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETTSMVLV 69

Query: 160 GCTFCLLYVMVTDADPRCPKCKNPGLLDVFRGN 190
           GC  CL+YVM+++ DP+CPKCK+  LLD    N
Sbjct: 70  GCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHEN 102

[Close]

BLAST of HG10004120 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-09
Identity = 40/102 (39.22%), Postives = 59/102 (57.84%), Query Frame = 0


Query: 94  NENDAYLDLK--LSPP----GVYSKGKSSNESKSSSPRSQDSCISAEVESNVNSENNNLR 153
           N+N   L+L+  LSPP       S  +S N S ++SP    SC+S+E     N E N   
Sbjct: 5   NKNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSP---SSCVSSE----TNQEENE-- 64

Query: 154 VESSPLIVMGCTFCLLYVMVTDADPRCPKCKNPGLLDVFRGN 190
              + ++++GC  CL+YVM++D DP+CPKCK+  LLD  + N
Sbjct: 65  -TITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQEN 96

[Close]

BLAST of HG10004120 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 7.8e-05
Identity = 28/77 (36.36%), Postives = 43/77 (55.84%), Query Frame = 0


Query: 109 VYSKGKSSNESKSS-SPRSQDSCISAEVESNVNSENNNLRVESSP-LIVMGCTFCLLYVM 168
           V + G+    S SS +  SQ+SC++   E      ++ +  E +P ++VMGC  C++YVM
Sbjct: 21  VVANGRFEGRSPSSDTSSSQNSCLTRTEEVKEEVASSWVDEEEAPEMVVMGCRSCMMYVM 80

Query: 169 VTDADPRCPKCKNPGLL 184
           V     RCPKCK   L+
Sbjct: 81  VLQERQRCPKCKCTDLI 97

The following BLAST results are available for this feature:

BLAST of HG10004120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885898.1	5.5e-93	96.32	uncharacterized protein LOC120076204 [Benincasa hispida]	[more]
TYK11779.1	3.7e-81	86.22	uncharacterized protein E5676_scaffold304G001060 [Cucumis melo var. makuwa]	[more]
XP_011656573.1	8.2e-81	85.71	uncharacterized protein LOC105435753 isoform X1 [Cucumis sativus]	[more]
XP_008456616.1	1.2e-79	85.57	PREDICTED: uncharacterized protein LOC103496521 isoform X4 [Cucumis melo] >XP_00...	[more]
XP_008456614.1	2.2e-78	86.32	PREDICTED: uncharacterized protein LOC103496521 isoform X3 [Cucumis melo] >XP_00...	[more]

BLAST of HG10004120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNI1	6.7e-09	37.63	Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1...	[more]
Q9SRN4	2.5e-08	39.22	Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1...	[more]

BLAST of HG10004120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CNF7	1.8e-81	86.22	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KE76	4.0e-81	85.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046290 PE=4 SV=1	[more]
A0A1S3C4Y0	5.7e-80	85.57	uncharacterized protein LOC103496521 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3C4C1	1.1e-78	86.32	uncharacterized protein LOC103496521 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3C387	1.1e-78	86.32	uncharacterized protein LOC103496521 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of HG10004120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06270.1	4.7e-10	37.63	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11600.1	1.8e-09	39.22	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT3G52561.1	7.8e-05	36.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR33177:SF51	GB\|AAF02129.1	coord: 92..196
None	No IPR available	PANTHER	PTHR33177	PUTATIVE-RELATED	coord: 92..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004120.1	HG10004120.1	mRNA