HG10004069 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCTCTCGTTTACGCCTTCCACTCTACAGATTGCTTGTCGGAAAATGTCAGGCTTCAATTTCTTCATCTTCGTGTAGCTTTCAGCGAATTCTGGACTTCACTGTGAAGCCAAAATCTGAGTTTTCTAACGAATGGCGGGCAGATGATCTCCATTTTTCGTATCTAATGAGGTCGAATCGGAGGTACAGTGGTGGTTCGGGGACATCGGAGCCCGAATTCGATCAGGTTAGAGAGGTGGACAGGATCAATCTCAAGTTCGCCGAAGCTAGGGAGGAGATAGAGTCAGCTATGGAGTCTAAAGAGACCGTATATTTTGATGAAGAAGCCGAGTGTGCTCGGGATGCTGTGAAAGAAGTTTTAGAAATGTACGAGGGGCTTCTGGCGAAGTTGCCCGAGAGCGAAAGGAAGGCGTTGCAGAGGTCAATGGGGCTTAAGATTGAGCAGCTGAAGGCTGAGCTTAAACAGCTTGACGAGTAA ATGAGCTCTCGTTTACGCCTTCCACTCTACAGATTGCTTGTCGGAAAATGTCAGGCTTCAATTTCTTCATCTTCGTGTAGCTTTCAGCGAATTCTGGACTTCACTGTGAAGCCAAAATCTGAGTTTTCTAACGAATGGCGGGCAGATGATCTCCATTTTTCGTATCTAATGAGGTCGAATCGGAGGTACAGTGGTGGTTCGGGGACATCGGAGCCCGAATTCGATCAGGTTAGAGAGGTGGACAGGATCAATCTCAAGTTCGCCGAAGCTAGGGAGGAGATAGAGTCAGCTATGGAGTCTAAAGAGACCGTATATTTTGATGAAGAAGCCGAGTGTGCTCGGGATGCTGTGAAAGAAGTTTTAGAAATGTACGAGGGGCTTCTGGCGAAGTTGCCCGAGAGCGAAAGGAAGGCGTTGCAGAGGTCAATGGGGCTTAAGATTGAGCAGCTGAAGGCTGAGCTTAAACAGCTTGACGAGTAA ATGAGCTCTCGTTTACGCCTTCCACTCTACAGATTGCTTGTCGGAAAATGTCAGGCTTCAATTTCTTCATCTTCGTGTAGCTTTCAGCGAATTCTGGACTTCACTGTGAAGCCAAAATCTGAGTTTTCTAACGAATGGCGGGCAGATGATCTCCATTTTTCGTATCTAATGAGGTCGAATCGGAGGTACAGTGGTGGTTCGGGGACATCGGAGCCCGAATTCGATCAGGTTAGAGAGGTGGACAGGATCAATCTCAAGTTCGCCGAAGCTAGGGAGGAGATAGAGTCAGCTATGGAGTCTAAAGAGACCGTATATTTTGATGAAGAAGCCGAGTGTGCTCGGGATGCTGTGAAAGAAGTTTTAGAAATGTACGAGGGGCTTCTGGCGAAGTTGCCCGAGAGCGAAAGGAAGGCGTTGCAGAGGTCAATGGGGCTTAAGATTGAGCAGCTGAAGGCTGAGCTTAAACAGCTTGACGAGTAA MSSRLRLPLYRLLVGKCQASISSSSCSFQRILDFTVKPKSEFSNEWRADDLHFSYLMRSNRRYSGGSGTSEPEFDQVREVDRINLKFAEAREEIESAMESKETVYFDEEAECARDAVKEVLEMYEGLLAKLPESERKALQRSMGLKIEQLKAELKQLDE Homology
BLAST of HG10004069 vs. NCBI nr
Match: XP_038885743.1 (uncharacterized protein LOC120076030 [Benincasa hispida]) HSP 1 Score: 278.5 bits (711), Expect = 3.6e-71 Identity = 149/159 (93.71%), Postives = 151/159 (94.97%), Query Frame = 0
BLAST of HG10004069 vs. NCBI nr
Match: XP_022990474.1 (uncharacterized protein LOC111487326 [Cucurbita maxima] >XP_022990475.1 uncharacterized protein LOC111487326 [Cucurbita maxima]) HSP 1 Score: 241.9 bits (616), Expect = 3.8e-60 Identity = 136/168 (80.95%), Postives = 142/168 (84.52%), Query Frame = 0
BLAST of HG10004069 vs. NCBI nr
Match: KAG6602205.1 (hypothetical protein SDJN03_07438, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 240.0 bits (611), Expect = 1.4e-59 Identity = 134/168 (79.76%), Postives = 143/168 (85.12%), Query Frame = 0
BLAST of HG10004069 vs. NCBI nr
Match: XP_022964579.1 (uncharacterized protein LOC111464557 [Cucurbita moschata] >XP_022964590.1 uncharacterized protein LOC111464557 [Cucurbita moschata]) HSP 1 Score: 238.0 bits (606), Expect = 5.4e-59 Identity = 133/168 (79.17%), Postives = 143/168 (85.12%), Query Frame = 0
BLAST of HG10004069 vs. NCBI nr
Match: KAG7032887.1 (hypothetical protein SDJN02_06937, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 237.7 bits (605), Expect = 7.1e-59 Identity = 133/168 (79.17%), Postives = 142/168 (84.52%), Query Frame = 0
BLAST of HG10004069 vs. ExPASy Swiss-Prot
Match: Q9M9H3 (Embryogenesis-like protein OS=Arabidopsis thaliana OX=3702 GN=EML PE=1 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.5e-30 Identity = 81/148 (54.73%), Postives = 100/148 (67.57%), Query Frame = 0
BLAST of HG10004069 vs. ExPASy TrEMBL
Match: A0A6J1JQ75 (uncharacterized protein LOC111487326 OS=Cucurbita maxima OX=3661 GN=LOC111487326 PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.8e-60 Identity = 136/168 (80.95%), Postives = 142/168 (84.52%), Query Frame = 0
BLAST of HG10004069 vs. ExPASy TrEMBL
Match: A0A6J1HL89 (uncharacterized protein LOC111464557 OS=Cucurbita moschata OX=3662 GN=LOC111464557 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 2.6e-59 Identity = 133/168 (79.17%), Postives = 143/168 (85.12%), Query Frame = 0
BLAST of HG10004069 vs. ExPASy TrEMBL
Match: A0A6J1BV77 (uncharacterized protein LOC111006046 OS=Momordica charantia OX=3673 GN=LOC111006046 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 1.6e-56 Identity = 131/168 (77.98%), Postives = 136/168 (80.95%), Query Frame = 0
BLAST of HG10004069 vs. ExPASy TrEMBL
Match: A0A5D3BXL9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00930 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 2.7e-56 Identity = 129/168 (76.79%), Postives = 137/168 (81.55%), Query Frame = 0
BLAST of HG10004069 vs. ExPASy TrEMBL
Match: A0A1S3C573 (uncharacterized protein LOC103496582 OS=Cucumis melo OX=3656 GN=LOC103496582 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 2.7e-56 Identity = 129/168 (76.79%), Postives = 137/168 (81.55%), Query Frame = 0
BLAST of HG10004069 vs. TAIR 10
Match: AT1G71730.1 (unknown protein; Has 52 Blast hits to 52 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). ) HSP 1 Score: 133.3 bits (334), Expect = 1.8e-31 Identity = 81/148 (54.73%), Postives = 100/148 (67.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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