HG10003901 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGAACTATTATCAGTTTGATTTGTCCCAACATCAAGTTGTGAGATTTATTGAACGACAAATGCAAACTACATTTAAAGAGTATAGGTCAGAGTTGCATAAACACTATAAACAATTTGCAACTCCTGAAGAGGCACGTGCATGCCCACCTGATCGGCTTAAGAATGCACTTGAAGATTGGCATATCGTATGCACGAGGTTTGAGAGCCCTAATTTTAAGGTATGATACTTCAATTATTGAGTTATTTTTCTAAGTTTGTTTACTTGACTTTTAGCTAATTTATAGTTTTATTAGAAAATGGTTGAAACGAACAAGAGGAGTTGAGAGGAACTTGATTTTAACCATAAAACTAGATCAAAGACATTCATCAACATACAACAAGATCTGGTATGAGGCTAGACAATAAATGTTTCTTTTGCTTTGATAACTCTTATTCAAGTTGACCTTTTTGTGATTTGAGTTACAGATAAAGAGTAAAGGTGAAACCGTTGGACCAATCGATCTATTCTATGAAACACATGCACGAGACGGAATTTTTGTGAATCAGGCTGCCAGTGATGCATATGTAAAACTTTTTTTTTTATTAAACAATGATTTCATTTGGAATTTTGTTACATATTTACTTATTTTAATTATATAATTGTAGGATAAAATGTTACAGTTGCAAGCGATGCCAACTCCAGAAGGAAACCAACCACTTTCAGGAGAAGAAATATGTGAGGTTGTGTTAGGAAGACGACCGGGTCATGTCAAAGGTCTTGGTTGGGGACCAAAGCCAAAATCTAGAAGTAATAACAGCTCGTCATCAAGTTCATCCTACGCACAAAAAGAGCACGAGCAAGCAGTTGAGATGAGGATTTTAAAAGAACGACTTGAACAACAGGATTCAAGAATTGAAGAACAACAAACAGAGATAGAGGGCTTGAAAGATTTGATCAAACAATTTATGAACTCGCAAGGAGGAATGCCAGAATAGGTATGAAGTAAAAAGTTTTTTTTTTTTTAATAAAAACAGTAGATAAAAAATAGTTAGTTTTGAGAATTATGTTGCTATCCTGCAGTTATGGTAGCAACTACATTATTTGTATGATGCAATAAAATGTTATTTGTTTTTGTTATGGTTTTGAATGTGGGGGCTAAAATAATGTTGTTATTTTGAATATAAGGTGAGAATCTTTTTTTAATGTATGGTTGAGATGTGTTGTTGTTTTAAATTTGGGTTGACGTTCTGAGTTAATAATTTTCTTGTTGTTGTTTTGAATGTTGAGTTGAGAATTGTGAATGTTGGATTTTTGTGTTATTGTGTGTTTTGCATGTGTTAAAGAAACATGAGTTAATAGATTTTTTGTTGTTTTGAGTATGTGTTAAAGAAATGTTAATTAATGAGTTTTGTGATGTTATTGTCTTAAATGTGAGTTGAGATTTCTAAGTTCATAATTTTTGTGTTATTACTTTGGTTTTGCATATGTGTTAACAAAATGTGAGTAGATAATTGTTGTGTTGATATTATTGTTTTGAATGTTGAATTGAGAATTGTGAGTGTTGAATGTTTGTGTTGTTTTTGTTGTTTTGAACATGTGTATTGAAATGTTAGCTAATGGTTTTTGTGATGTTGTTATTGTTTTGAATGTGAGTTAAAGGTTTTGAGTTAATGATTTTTGTGTTGTTTTGAATGAGTGAATGTATTTAGATAATATATATATATATATATATATATATGTTTGAGTTGAGAGATTTAATTTTAAGTGTTTTGATTATAATTTAAACTTTGTTTGTATTTTCTTTTACAGGATCAATGTTATGTTCGTGACTAA ATGCAGAACTATTATCAGTTTGATTTGTCCCAACATCAAGTTGTGAGATTTATTGAACGACAAATGCAAACTACATTTAAAGAGTATAGGTCAGAGTTGCATAAACACTATAAACAATTTGCAACTCCTGAAGAGGCACGTGCATGCCCACCTGATCGGCTTAAGAATGCACTTGAAGATTGGCATATCGTATGCACGAGGTTTGAGAGCCCTAATTTTAAGGATCAATGTTATGTTCGTGACTAA ATGCAGAACTATTATCAGTTTGATTTGTCCCAACATCAAGTTGTGAGATTTATTGAACGACAAATGCAAACTACATTTAAAGAGTATAGGTCAGAGTTGCATAAACACTATAAACAATTTGCAACTCCTGAAGAGGCACGTGCATGCCCACCTGATCGGCTTAAGAATGCACTTGAAGATTGGCATATCGTATGCACGAGGTTTGAGAGCCCTAATTTTAAGGATCAATGTTATGTTCGTGACTAA MQNYYQFDLSQHQVVRFIERQMQTTFKEYRSELHKHYKQFATPEEARACPPDRLKNALEDWHIVCTRFESPNFKDQCYVRD Homology
BLAST of HG10003901 vs. NCBI nr
Match: XP_038887413.1 (uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]) HSP 1 Score: 87.0 bits (214), Expect = 7.9e-14 Identity = 36/74 (48.65%), Postives = 59/74 (79.73%), Query Frame = 0
BLAST of HG10003901 vs. NCBI nr
Match: XP_038887408.1 (poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 87.0 bits (214), Expect = 7.9e-14 Identity = 36/74 (48.65%), Postives = 59/74 (79.73%), Query Frame = 0
BLAST of HG10003901 vs. NCBI nr
Match: XP_038887411.1 (poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida] >XP_038887412.1 poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida]) HSP 1 Score: 87.0 bits (214), Expect = 7.9e-14 Identity = 36/74 (48.65%), Postives = 59/74 (79.73%), Query Frame = 0
BLAST of HG10003901 vs. NCBI nr
Match: XP_038887410.1 (poly [ADP-ribose] polymerase 1-like isoform X3 [Benincasa hispida]) HSP 1 Score: 87.0 bits (214), Expect = 7.9e-14 Identity = 36/74 (48.65%), Postives = 59/74 (79.73%), Query Frame = 0
BLAST of HG10003901 vs. NCBI nr
Match: XP_038887409.1 (poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]) HSP 1 Score: 84.0 bits (206), Expect = 6.7e-13 Identity = 34/72 (47.22%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of HG10003901 vs. ExPASy TrEMBL
Match: A0A6J1DUH3 (uncharacterized protein LOC111023212 OS=Momordica charantia OX=3673 GN=LOC111023212 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.7e-12 Identity = 38/74 (51.35%), Postives = 57/74 (77.03%), Query Frame = 0
BLAST of HG10003901 vs. ExPASy TrEMBL
Match: A0A5A7U0Z1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold83G00150 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.7e-12 Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 0
BLAST of HG10003901 vs. ExPASy TrEMBL
Match: A0A5A7VAR5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00950 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.7e-12 Identity = 34/76 (44.74%), Postives = 52/76 (68.42%), Query Frame = 0
BLAST of HG10003901 vs. ExPASy TrEMBL
Match: A0A5A7T4P0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1161G00310 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 6.1e-12 Identity = 34/76 (44.74%), Postives = 52/76 (68.42%), Query Frame = 0
BLAST of HG10003901 vs. ExPASy TrEMBL
Match: A0A5D3DD82 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1734G00120 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 6.1e-12 Identity = 34/76 (44.74%), Postives = 52/76 (68.42%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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