HG10003873 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGAGGAACTGGAGGACCTCTTCTATGCATAGGCGATCTTCTGTGCGATGTCGGAGAAGAAGAAGCCGTATCAAATGAAACCCCCAAATCAATTCCATCCCCATCTTCTTCCTCTTCTTCTGTTTCCACTCTTTTCCATGTATCTGAACCCCCCGATCTTCCCAAAATCTTCCAGGTTTTTTCAATTTCCGTTTCTTCTTTAATTGACGCTTCCGATTGTCGATTTTCCCTTTTCATTTCTACTTTAACTATTTTGCTTTATCTTTATTTCCTGTTCCAAACATCATAGCTGCCATAATTTCACCCTACCCATCTTCTTCTTCTTCTTCTTCAGGAAAATTACGACCAATTGAACAAAGTATTCGATGATAATGATCACTCCTGGACTGCTTTGACGTTGAAGGTAGATTGTTTCTTGTGTTCCACATTGAATAATACAATGATATGAAATAATGTCTGTAGCTTTTGGGTCTGAACTTTACTTTCGTGCGAGTGAGTTTCTGCAACCCGTTCTATTACCCATTTTCAGCCCCTAAATGATTAATGATCCACCCAAAAACAAAGGAAATCTAACCCTTCTGCTTACATCAAAGTTCAGCCCTAATTCGATGGTCATATGTCTATCGCGATATTCATTTTTCATGGAAAGAATGAGAAAAATGAAAATGGCAATAGACATTACCATCGCTTTAGGGTATGGCCATTCCTAACATGATCCTTTATAAAATGCAGTGCCCTTTGATGTTAGAGAGTGGGTCATTAATCATTTAGAGGCCGAGAATGGGTCAACCGTACAAAAATCTCTCGTTCTTGCCCCATGTCCTTTGATTTGAAGAACTGCTTGGTGTTTGAGGAAAGGCATTATTTCTGAGATTATGAGGAACGACATTATTTCCTTATATATGATGACTGTATTTGGGGCATTTTCAGATGTGCAGTGCTCTTGATACTGCTACTAAGTTGGTTGAATCAACCAACTCAAATTCTAGATTTTTGTTGGAGAAGATTGTGGAGCTTGAACATGTTTTGGAAAAGGGAGATTCCACAAGAGAGGCAGCCATGGCCATCCAGACCAGTTATAGCTCTCAAGTTGCTCAAGACTCCGTTTCTTCTCAGAATGAAGGTTAG ATGCGAGGAACTGGAGGACCTCTTCTATGCATAGGCGATCTTCTGTGCGATGTCGGAGAAGAAGAAGCCGTATCAAATGAAACCCCCAAATCAATTCCATCCCCATCTTCTTCCTCTTCTTCTGTTTCCACTCTTTTCCATGTATCTGAACCCCCCGATCTTCCCAAAATCTTCCAGGAAAATTACGACCAATTGAACAAAGTATTCGATGATAATGATCACTCCTGGACTGCTTTGACGTTGAAGATGTGCAGTGCTCTTGATACTGCTACTAAGTTGGTTGAATCAACCAACTCAAATTCTAGATTTTTGTTGGAGAAGATTGTGGAGCTTGAACATGTTTTGGAAAAGGGAGATTCCACAAGAGAGGCAGCCATGGCCATCCAGACCAGTTATAGCTCTCAAGTTGCTCAAGACTCCGTTTCTTCTCAGAATGAAGGTTAG ATGCGAGGAACTGGAGGACCTCTTCTATGCATAGGCGATCTTCTGTGCGATGTCGGAGAAGAAGAAGCCGTATCAAATGAAACCCCCAAATCAATTCCATCCCCATCTTCTTCCTCTTCTTCTGTTTCCACTCTTTTCCATGTATCTGAACCCCCCGATCTTCCCAAAATCTTCCAGGAAAATTACGACCAATTGAACAAAGTATTCGATGATAATGATCACTCCTGGACTGCTTTGACGTTGAAGATGTGCAGTGCTCTTGATACTGCTACTAAGTTGGTTGAATCAACCAACTCAAATTCTAGATTTTTGTTGGAGAAGATTGTGGAGCTTGAACATGTTTTGGAAAAGGGAGATTCCACAAGAGAGGCAGCCATGGCCATCCAGACCAGTTATAGCTCTCAAGTTGCTCAAGACTCCGTTTCTTCTCAGAATGAAGGTTAG MRGTGGPLLCIGDLLCDVGEEEAVSNETPKSIPSPSSSSSSVSTLFHVSEPPDLPKIFQENYDQLNKVFDDNDHSWTALTLKMCSALDTATKLVESTNSNSRFLLEKIVELEHVLEKGDSTREAAMAIQTSYSSQVAQDSVSSQNEG Homology
BLAST of HG10003873 vs. NCBI nr
Match: XP_008445675.1 (PREDICTED: uncharacterized protein LOC103488633 isoform X4 [Cucumis melo]) HSP 1 Score: 260.0 bits (663), Expect = 1.2e-65 Identity = 137/152 (90.13%), Postives = 144/152 (94.74%), Query Frame = 0
BLAST of HG10003873 vs. NCBI nr
Match: KAA0063938.1 (uncharacterized protein E6C27_scaffold616G00810 [Cucumis melo var. makuwa] >TYK05201.1 uncharacterized protein E5676_scaffold1415G00780 [Cucumis melo var. makuwa]) HSP 1 Score: 260.0 bits (663), Expect = 1.2e-65 Identity = 137/152 (90.13%), Postives = 144/152 (94.74%), Query Frame = 0
BLAST of HG10003873 vs. NCBI nr
Match: XP_008445677.1 (PREDICTED: uncharacterized protein LOC103488633 isoform X5 [Cucumis melo]) HSP 1 Score: 257.7 bits (657), Expect = 6.1e-65 Identity = 136/151 (90.07%), Postives = 143/151 (94.70%), Query Frame = 0
BLAST of HG10003873 vs. NCBI nr
Match: XP_008445673.1 (PREDICTED: uncharacterized protein LOC103488633 isoform X2 [Cucumis melo]) HSP 1 Score: 257.7 bits (657), Expect = 6.1e-65 Identity = 136/151 (90.07%), Postives = 143/151 (94.70%), Query Frame = 0
BLAST of HG10003873 vs. NCBI nr
Match: XP_016900152.1 (PREDICTED: uncharacterized protein LOC103488633 isoform X3 [Cucumis melo]) HSP 1 Score: 257.7 bits (657), Expect = 6.1e-65 Identity = 136/151 (90.07%), Postives = 143/151 (94.70%), Query Frame = 0
BLAST of HG10003873 vs. ExPASy TrEMBL
Match: A0A5D3BZV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00780 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 6.0e-66 Identity = 137/152 (90.13%), Postives = 144/152 (94.74%), Query Frame = 0
BLAST of HG10003873 vs. ExPASy TrEMBL
Match: A0A1S3BE50 (uncharacterized protein LOC103488633 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103488633 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 6.0e-66 Identity = 137/152 (90.13%), Postives = 144/152 (94.74%), Query Frame = 0
BLAST of HG10003873 vs. ExPASy TrEMBL
Match: A0A1S3BCT2 (uncharacterized protein LOC103488633 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103488633 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 3.0e-65 Identity = 136/151 (90.07%), Postives = 143/151 (94.70%), Query Frame = 0
BLAST of HG10003873 vs. ExPASy TrEMBL
Match: A0A1S4DVZ1 (uncharacterized protein LOC103488633 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103488633 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 3.0e-65 Identity = 136/151 (90.07%), Postives = 143/151 (94.70%), Query Frame = 0
BLAST of HG10003873 vs. ExPASy TrEMBL
Match: A0A1S3BDA2 (uncharacterized protein LOC103488633 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488633 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 3.0e-65 Identity = 136/151 (90.07%), Postives = 143/151 (94.70%), Query Frame = 0
BLAST of HG10003873 vs. TAIR 10
Match: AT4G08240.2 (unknown protein; Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 124.8 bits (312), Expect = 5.8e-29 Identity = 65/135 (48.15%), Postives = 95/135 (70.37%), Query Frame = 0
BLAST of HG10003873 vs. TAIR 10
Match: AT4G08240.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 124.8 bits (312), Expect = 5.8e-29 Identity = 65/135 (48.15%), Postives = 95/135 (70.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|