HG10003750 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10003750
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionsignal peptide peptidase-like 5
LocationChr08: 7900227 .. 7900574 (+)
RNA-Seq ExpressionHG10003750
SyntenyHG10003750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTCTCTTCTTCTCCGGCGAGACGTCCAATCATCCCTCTCTTCTCACTCCTCTTTCTCGTTTTTATCTTCCGCATCTCCTCTGTCTTCGCCGACGATGTCTCGCTCGATGACGATTCCACTCCCAAGTCTGAAAATTGCAACAATCCCTTCGAATTGGTATTTTTCTCCCCATTTTGTTCTTGTAATTGTAATTTTTCTTCTCCTTTGCCATTCATATTGGCATCTTCGGTTTTGATCGTTTTATTTCGCATTGCATTTACTCCATTTGTGTGTTCCTTTATTTTGGGTCGATCTAATTTTGGGATGGATGATCATGATGTGCGACTTGACCATGATTTCTGA

mRNA sequence

ATGGCGTTCTCTTCTTCTCCGGCGAGACGTCCAATCATCCCTCTCTTCTCACTCCTCTTTCTCGTTTTTATCTTCCGCATCTCCTCTGTCTTCGCCGACGATGTCTCGCTCGATGACGATTCCACTCCCAAGTCTGAAAATTGCAACAATCCCTTCGAATTGGTATTTTTCTCCCCATTTTGTTCTTGTAATTGTAATTTTTCTTCTCCTTTGCCATTCATATTGGCATCTTCGGTTTTGATCGTTTTATTTCGCATTGCATTTACTCCATTTGTGTGTTCCTTTATTTTGGGTCGATCTAATTTTGGGATGGATGATCATGATGTGCGACTTGACCATGATTTCTGA

Coding sequence (CDS)

ATGGCGTTCTCTTCTTCTCCGGCGAGACGTCCAATCATCCCTCTCTTCTCACTCCTCTTTCTCGTTTTTATCTTCCGCATCTCCTCTGTCTTCGCCGACGATGTCTCGCTCGATGACGATTCCACTCCCAAGTCTGAAAATTGCAACAATCCCTTCGAATTGGTATTTTTCTCCCCATTTTGTTCTTGTAATTGTAATTTTTCTTCTCCTTTGCCATTCATATTGGCATCTTCGGTTTTGATCGTTTTATTTCGCATTGCATTTACTCCATTTGTGTGTTCCTTTATTTTGGGTCGATCTAATTTTGGGATGGATGATCATGATGTGCGACTTGACCATGATTTCTGA

Protein sequence

MAFSSSPARRPIIPLFSLLFLVFIFRISSVFADDVSLDDDSTPKSENCNNPFELVFFSPFCSCNCNFSSPLPFILASSVLIVLFRIAFTPFVCSFILGRSNFGMDDHDVRLDHDF
Homology
[Close]
BLAST of HG10003750 vs. NCBI nr
Match: XP_022992223.1 (signal peptide peptidase-like 5 [Cucurbita maxima])

HSP 1 Score: 94.4 bits (233), Expect = 7.0e-16
Identity = 47/55 (85.45%), Postives = 50/55 (90.91%), Query Frame = 0 

Query: 1  MAFSSSPARRPIIPLFSLLFLVFIFRISSVFADDVSLDDDSTPKSENCNNPFELV 56
          MA SSSPAR PIIPLFSLLFL+F+FRISSVFA DVSLDDDS PKS NCNNPF+LV
Sbjct: 1  MALSSSPARPPIIPLFSLLFLLFLFRISSVFAGDVSLDDDSAPKSGNCNNPFDLV 55

[Close]
BLAST of HG10003750 vs. NCBI nr
Match: KAG6575325.1 (Signal peptide peptidase-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 94.4 bits (233), Expect = 7.0e-16
Identity = 47/55 (85.45%), Postives = 50/55 (90.91%), Query Frame = 0 

Query: 1  MAFSSSPARRPIIPLFSLLFLVFIFRISSVFADDVSLDDDSTPKSENCNNPFELV 56
          MA SSSPAR PIIPLFSLLFL+F+FRISSVFA DVSLDDDS PKS NCNNPF+LV
Sbjct: 1  MALSSSPARPPIIPLFSLLFLLFLFRISSVFAGDVSLDDDSAPKSGNCNNPFDLV 55

[Close]
BLAST of HG10003750 vs. NCBI nr
Match: XP_022929837.1 (signal peptide peptidase-like 3 [Cucurbita moschata] >XP_022929838.1 signal peptide peptidase-like 3 [Cucurbita moschata])

HSP 1 Score: 94.4 bits (233), Expect = 7.0e-16
Identity = 47/55 (85.45%), Postives = 50/55 (90.91%), Query Frame = 0 

Query: 1  MAFSSSPARRPIIPLFSLLFLVFIFRISSVFADDVSLDDDSTPKSENCNNPFELV 56
          MA SSSPAR PIIPLFSLLFL+F+FRISSVFA DVSLDDDS PKS NCNNPF+LV
Sbjct: 1  MALSSSPARPPIIPLFSLLFLLFLFRISSVFAGDVSLDDDSAPKSGNCNNPFDLV 55

[Close]
BLAST of HG10003750 vs. NCBI nr
Match: XP_023549154.1 (signal peptide peptidase-like 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 94.4 bits (233), Expect = 7.0e-16
Identity = 47/55 (85.45%), Postives = 50/55 (90.91%), Query Frame = 0 

Query: 1  MAFSSSPARRPIIPLFSLLFLVFIFRISSVFADDVSLDDDSTPKSENCNNPFELV 56
          MA SSSPAR PIIPLFSLLFL+F+FRISSVFA DVSLDDDS PKS NCNNPF+LV
Sbjct: 1  MALSSSPARPPIIPLFSLLFLLFLFRISSVFAGDVSLDDDSAPKSGNCNNPFDLV 55

[Close]
BLAST of HG10003750 vs. NCBI nr
Match: KAG7013864.1 (Signal peptide peptidase-like 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 94.4 bits (233), Expect = 7.0e-16
Identity = 47/55 (85.45%), Postives = 50/55 (90.91%), Query Frame = 0 

Query: 1  MAFSSSPARRPIIPLFSLLFLVFIFRISSVFADDVSLDDDSTPKSENCNNPFELV 56
          MA SSSPAR PIIPLFSLLFL+F+FRISSVFA DVSLDDDS PKS NCNNPF+LV
Sbjct: 1  MALSSSPARPPIIPLFSLLFLLFLFRISSVFAGDVSLDDDSAPKSGNCNNPFDLV 55

[Close]
BLAST of HG10003750 vs. ExPASy TrEMBL
Match: A0A6J1ENS8 (signal peptide peptidase-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111436325 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.4e-16
Identity = 47/55 (85.45%), Postives = 50/55 (90.91%), Query Frame = 0 

Query: 1  MAFSSSPARRPIIPLFSLLFLVFIFRISSVFADDVSLDDDSTPKSENCNNPFELV 56
          MA SSSPAR PIIPLFSLLFL+F+FRISSVFA DVSLDDDS PKS NCNNPF+LV
Sbjct: 1  MALSSSPARPPIIPLFSLLFLLFLFRISSVFAGDVSLDDDSAPKSGNCNNPFDLV 55

[Close]
BLAST of HG10003750 vs. ExPASy TrEMBL
Match: A0A6J1JYL1 (signal peptide peptidase-like 5 OS=Cucurbita maxima OX=3661 GN=LOC111488610 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.4e-16
Identity = 47/55 (85.45%), Postives = 50/55 (90.91%), Query Frame = 0 

Query: 1  MAFSSSPARRPIIPLFSLLFLVFIFRISSVFADDVSLDDDSTPKSENCNNPFELV 56
          MA SSSPAR PIIPLFSLLFL+F+FRISSVFA DVSLDDDS PKS NCNNPF+LV
Sbjct: 1  MALSSSPARPPIIPLFSLLFLLFLFRISSVFAGDVSLDDDSAPKSGNCNNPFDLV 55

[Close]
BLAST of HG10003750 vs. ExPASy TrEMBL
Match: A0A0A0KAQ0 (PA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G022260 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 5.8e-16
Identity = 47/55 (85.45%), Postives = 49/55 (89.09%), Query Frame = 0 

Query: 1  MAFSSSPARRPIIPLFSLLFLVFIFRISSVFADDVSLDDDSTPKSENCNNPFELV 56
          MAFSSSPA   IIPL SLLFL+F+FRISSVFADDVSLDDDS PKS NCNNPFELV
Sbjct: 1  MAFSSSPATPSIIPLLSLLFLIFLFRISSVFADDVSLDDDSAPKSGNCNNPFELV 55

[Close]
BLAST of HG10003750 vs. ExPASy TrEMBL
Match: A0A1S3CLP1 (signal peptide peptidase-like 5 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502248 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.7e-15
Identity = 46/55 (83.64%), Postives = 48/55 (87.27%), Query Frame = 0 

Query: 1  MAFSSSPARRPIIPLFSLLFLVFIFRISSVFADDVSLDDDSTPKSENCNNPFELV 56
          MAFSSSP    IIPL SLLFL+F+FRISSVFADDVSLDDDS PKS NCNNPFELV
Sbjct: 1  MAFSSSPTTPSIIPLLSLLFLIFLFRISSVFADDVSLDDDSAPKSGNCNNPFELV 55

[Close]
BLAST of HG10003750 vs. ExPASy TrEMBL
Match: A0A1S3CMS6 (signal peptide peptidase-like 5 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502248 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.7e-15
Identity = 46/55 (83.64%), Postives = 48/55 (87.27%), Query Frame = 0 

Query: 1  MAFSSSPARRPIIPLFSLLFLVFIFRISSVFADDVSLDDDSTPKSENCNNPFELV 56
          MAFSSSP    IIPL SLLFL+F+FRISSVFADDVSLDDDS PKS NCNNPFELV
Sbjct: 1  MAFSSSPTTPSIIPLLSLLFLIFLFRISSVFADDVSLDDDSAPKSGNCNNPFELV 55

The following BLAST results are available for this feature:
BLAST of HG10003750 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022992223.17.0e-1685.45signal peptide peptidase-like 5 [Cucurbita maxima][more]
KAG6575325.17.0e-1685.45Signal peptide peptidase-like 2, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022929837.17.0e-1685.45signal peptide peptidase-like 3 [Cucurbita moschata] >XP_022929838.1 signal pept... [more]
XP_023549154.17.0e-1685.45signal peptide peptidase-like 5 [Cucurbita pepo subsp. pepo][more]
KAG7013864.17.0e-1685.45Signal peptide peptidase-like 2 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of HG10003750 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of HG10003750 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ENS83.4e-1685.45signal peptide peptidase-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111436325 PE... [more]
A0A6J1JYL13.4e-1685.45signal peptide peptidase-like 5 OS=Cucurbita maxima OX=3661 GN=LOC111488610 PE=3... [more]
A0A0A0KAQ05.8e-1685.45PA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G022260 PE=4 SV=... [more]
A0A1S3CLP11.7e-1583.64signal peptide peptidase-like 5 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1035022... [more]
A0A1S3CMS61.7e-1583.64signal peptide peptidase-like 5 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035022... [more]
BLAST of HG10003750 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10003750.1HG10003750.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042138 meiotic DNA double-strand break formation
biological_process GO:0006508 proteolysis
cellular_component GO:0010008 endosome membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004190 aspartic-type endopeptidase activity