HG10003717 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10003717
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	small RNA degrading nuclease 5
Location	Chr08: 6741834 .. 6753160 (+)
RNA-Seq Expression	HG10003717
Synteny	HG10003717

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTCTTCCAGTGTTTCAGCTTTGGATTCCGAAGACGAGGGCAAGTCGAAGCCCAGCTTCTTCGATATATATGGAACCGATGTATGTATTCTTTTCTTCATCATTCACCTTCCCCATTTGCTTTTTCATCTTCTGTATAATCATGATTCTTGTTGCTGTTAAATCAATAAAAGGGTGTTACTATTTCCTTAAACTGCATAAGCTCTTATTATTCTGCAACAAAATGACACCAGATAAAACATACTGCATTCTGCTTACTTTGATTTGTCTTGTAGGCCAAAGCTGAGGTTCTCTTCAAAAATCCAGAATCTAATTCAACTTTAAGTCTGCAAGTGAGTTTATTTTAGTTGCCAAGTTTCTTCTAATATTAAAGTCAGAAGTGGCTATTAGATTTTTATTGTCGTTTATCTTTTCTCTGCAGGATGTTCAAGGGCTTGTTACTTGGGTGCTTGCTGAAGGTTTCATGCCGCCGTGGGTTTTTATCAAGGTCAATACCTTTTCAACTTTTAAATTATTGATATCTCTAACTTGAAATTTTATGCAAGCAAAGAAGACTTGACCATGGAGGTAATGTTTTTAGATAGAAATCAAATACCGGTGATGTCTGTTGTTGGATTAAAGGTCTAGACCTCAAATATTTTTGAGCTATATTCTGTCATTTTTGCTTAAATAGGGTCTCCTCCTGTCCTTTCTTCACTCTCATCACATGTAATTATTTGAAGCTGCATTGCTGATTTTCTCCTATGGAGGTGTGACCAGGAGATAGAACCTTACATTTTGTTATGAGCTTGTATTCAGTGATGTCTGAATTAGATTGACAACTGGGATCTTGGTGTTCCTCTGTTAACTCTTGAAAGTCTACAAGCTTTCTTATTTTCTAACTGTGATCGTTAATTTTTCTAAGACTATTAATTTGAATAGCCTTATGCTCTGTTATTTTATCAATGGTTGATGGTTTACCTTTGCTCCAAATATTTAAGATTTCCTTGAAACACTCAAAGTTGAATATATGCAGAACAAACCCCTAATCCCAAAAGTGGTTATGGTTTATCTCCCTGGCCTGGATGCTGCTCTGTACATGTCACAGTCCAAGATACTTCCTACATTTAAAAGATTCTGCGGCAGTCCTAGGGCAGTTTTAGCTCTTAGGTGTGCATTCATTTATTAAACTTCACAATTATTTATTATATGCCTTTTAGAATGTTTCTGTGATTTACTTACCGTACAGTCCTCATGTTTTGATTTTTCGTATTTTGCTAGCTGTATATCAGATAGAATGCAAACAATTGATGCACTTTTGACGTGTAAGGTAAAGAGAAAGAGGAATGCAAACAATGTAGACATAAAGAATAAATTGACTTCTCAACCAGGTTTGTAAACCATTGCCAAACTTTAGTTTTGGTCTAGCTCCCCAGCTATTTAATTTTCATCTTGTGCTGTTTCAGTATTCTTTCTATTTCCTTGTAGGAGTAGGGAATTATTGCACTTTATTACTACAATTGTAACTATTATTAATTATTATTGTTATAAATTTGTTTTCGTGTGTCCTTGAGGGTATAACATGATGAAAACCTTTTCTGAGTATAAGACTGTGCTACAAGGAATTTAAAGGTGAGTCTACATAATTATGTGGGCTGATGACTTGTACTTTACTGAGAAGAGGGCATTTTAGTGTCTATATACTTGTTGAAAGTGGTTTTGATGCCTTTTATCTACTCTTGCATTTTTCTGAACTGACCTTTTGACTTGTATACATTCTCTCTCTTTTCCTCTCAATATATTTATTTGGAATGTATGCAGAAATATCTGATCTTGAAAAAGAAGCACCAATATCTATCAAGCTCCCAAAGGAGTTACCTTTCCCTGTAACATATTATACGCTAACTACCAAAGCATTGGAAGACAATGGTTATCCTTTCAATCAACCAGGTTATTTATTTTTGGTAGTTAATTGTTTGTGTTCTCCTGGAAAGTTGTATTTTAACACCCATAGATCCTCTCATCACCCTCACTGAAACGTTTTTTCAAGTTAGAAAATTCCGTAACTTAATATTCATCTGATTCAGGTTTTATCCAAACACTTCGCGCTCCTGTGGGATCTTCACCTAATGAAATGTTGGCACTGGACTGTGAGATGGTAAGTCCATTTTTCTTTCCCAATTTTGAAAATCTAATATATCTCAACGGATGCTTAATCTTGAGATGCAAGCTTATTATCCCCCCCAGCCCCCATATATTCGACAAATAATCATGTTTATTAACATCTTTGATTGCTTTTATATTATTTCTTTTTCATATCTTACTGCTCATATTTGTGTTAAAGTTGATTTCAATACTCTGTGGCCCTCCAAAAATAATGAAAAAGTTCTTTACAATACCATAGCATGGGTAGAGCTTTTCTTTTTTCATTATGGCACTTGCAACTCAAGAGAAATAGGCGTACATTCAAGGGAAAATATTTCTTTCACTCCTTCCTTTAAAATATGATTTCTGTTGCTGTTCTTGGTCTACATGTAAGAAATCACACTTTCATTAAAAAAAAATATCAATGTACAAGGACATACTAAATACAAGCCCCAACATAAGGGGTCCGACCCTAACTACAAAAAGGACTCCAATCTAGATAAGGGCACAAATTTCATCAAAATAGAGGCACAAAATAAATGGCATCAAGGAAACTATCAATTGTCCTTTCTATATTGTTAAATTTCCTAGGGTTCGGAAATTCCTCAAGTTGCTAAAGCTGCTTTACCTCTTTGGACGGATGGCTACCCAAGGTAGTGGAGAGGAGGCCGTTTAAGCTGTAAGGTAGAGCCACATGCCAATTGAAGGAAGAAAGTTAGTAGGTGCAAAACTCATCGAGAAAATATACCATCCTGGAGAGAGAGTTAGCAAAGGAAACTTGTTTTGTTGTCATAAGTGTTTATACTCTCATGAGCAAGTTCTCACAAGAAAAACTTATTTTTAAGGATATCAGGCTATCAGCTATGTCAATTTTTGTTGTATAAGGAGGGCAGGAGGAAAGATGACAAAACCACAATAGTGTTCATAATCTCATGGCTAATTTAACATCGTATCAATTTGGTAAGAGCCAAGAGGGGAAGGTGATTCGTGATTTGGATGTATTTATCTTCTTCATTGCTCACTGCTTATCGGAAGTGACAATAGTGAAATCCAATAGCTGTTTTATCAGCGGAATGTGCTTTTGGGAAGCCAGAAACTTGTTTGACTAGATGCTTACATTAGCATCATTGAGGTTAATTACAGATTTATTCACAAACTGGGAGAAAAATCTGAAGACAATAATTTTTTTAATGATTTTATGAAACATTCAAGAAATATCCATGACAGGGAAGTGTAGTTATTTGTTTACTTTGTAAAATTTTGAGTCCAAAGCTAAGTTGTTGAAATGTTAATGTTGCATGTAATTGATAAGCCTTGCCCTACACTCTTATTTATAATTAACTAGCAAGGAAACAAGGGAAGTTTTGAGAGCTTCCCACCTCTCTCAATTTTCCCCAGAGCATGCACTGAGCGGAAATTAGCCAAAAGATGCCCTCTTTCACACGTCTCTCAGCTATATACTGTAGCCTCACTGCCGCTGTAACTAACAAAATTCCTTTGTGGCCCCACTAATACATGTAATGCACTAACATTCCTTATTCATGTGCCTTCCCCCTTCCTCACTCTCTTCCGGGTATACACTTTCATAACAGGGGCCTATCAGTATTCTCTATTCTGTTCATATGCTTTTAGGCTACTTAGTCAGCAAATACTCAATAATTATCTTTATTTGTAATTCTTGATATAATGCGTTATTAATTCCTTTTTTTTCCTTTCCTTTTATTAGTGTGTGACATGTGAAGGGTTTGAGCTCACAAGAATAACCCTGGTGGATATGGAAGGACGGGTATGCACTCATTCTCTGCCTCAGTACCGTGCCTTTGTGAAAGCATTGGATTTTTGTATGAGGAAACTTAACTGGCTTTGAAGACTTTAAATCAAATACTTGATAGTTATTATCTGAATTCTGAAAAAATAATCTAGAACTAAATAGTTAATTTGTGTAACCATCTTGCTAAATGCTAAGTTAATTCAATTATCTTTATCTTAATCCTTTCACAGCTTATGCTTCTTTGTGAAGTTAAAATGACTAGTTAATAAATTGAAGCTGTGTGATTTTACCTTGGTAGCATGCAGTTCCCGTGTTTAACTAAAGTGTTAGACCACCTATTGTCGTTTTTGGGTTAACAAAGTAATACCGATTTTCATTTCATTGGGGACTTCCTGTATTTGATTGTTTTTATTTATTCACTTTGCCTGGTTATTGCAGGTTGTCCTTGACAAATTGGTAAAACCGTCAAATGAAATTGTTGATTACAATACGAGGCAAGATCTTCTTGAGCTTTTTGTAGACAATATACTTGATGTTGATGATGAAAAGTTCTTATGATGTCTCATATATATATTTAAAAAAATCTCATCAAGAAAGTTCTTATGATGTCAAATTTTAGCTTCCTGTATTTGATTGATACGATGATTTATGAAGCTGTTTTAGTTATATTGCATGTTTTATTATTCTTTTAATTAATTACCTTTGACAATGATGCTTGTTTTTTTTTTTTTTTTTTGTTTGTTTGTTTATTTTGTGGATAAGAAACGGACAAGAGAGTATATTCAAACCAAACAAAAAAGACAGCCTATCGGCTGGGGGTAGAGGTATCCTCCTCCCTAAGAAGAACTACCACAAAAAGGCTTTCCAATTTCTAATTATCATGTAATTGCAAAAAAAAAAAAAAAATAACATAAATAAATAAATAAAACTAAAATTTTTGACTTGAACACCACCAAGAGGTCAACTGTTGTATACTATAAATAAAAGATGCCTCTACGTTCAACTTATCCTCAAATAGTCTAAGATTCCTCTCCTTCCACACAAGCCAAAAGAATTCTTTGTGGTTTGAACTTCACGCTGCTTAAATAGAGAATTTTTGGGTGTACAATAGTGGTTCATTTTCATCATGTTTGTGCGTGAACTTATTGTCCAAGGGGAAATTCTTGGCTTATCTTGGGCGTTAATGCCGGACACCCAATGTGTCTGAATGGCTACTTTTTTCAAGGCGCAATATACTAATGAAAAACGAGGAACTAACCTCGTTCTCTTTTTTTGTGTTTGTCTTTTGCGGCTTAACAGGTTTAGTGGAATTACATGTGAGATGTTAAGTGGGGTGACCACTAGGCTGGAAGATGTTCAGGTTCTCTCTTTGACACTGTACTCACTGATGTTATCTACTTGCAGCAATAATTGTTTGATGAAACTTTCAAATGCATTTGTGGTAAATGTACTCTGCAGAGAGATTTTTTAAATCTGGTTCACAAGGAGACTGTTTTAGTTGGCCATTCGCTGGAAAATGACCTGATGGCATTGAAGATCTCTCATGATCTGGTGGTTGATACTGCAGTACTATATAAGCATCCTCGTGGCGGTTCTCATAAATCTGCCCTTCGGATTCTTGCTAAAAGATTTCTTTCCAAGGAGATTCAACAATCCGGAAATGGCCATGATAGTATTGAGGATGCAAGAGCTACTATGGAACTTGCACTTCTTAAAATTAAACATGGCAAGTGACATTCTACTGACACTATACTTATGGAGAACACAGTTTGACTGTTCAACTCTGAAGTTCCTTGGGAATATTACCGGTTACACTTTAGTGGTGTTTATGTCAGTTAGTTTAGTGCATTTGACTTACAATCTGCAATTTCATTTATTGGTGCGAGTGCGAGAACAGCTGATTGAGTTTCATGTTTGATGTATTCAATATTCGTTAGTTGCTGCATGTGGGTGTCATGATATTGCAGTAAAATGAAAAGTCTGACCTATTTATACATAAAATAAAGAGTGCCTAGGCATATTTTTGAAAGGGTCGATTAATTGTTTGAGCATTCTTCAAAATGGGGTAGCATACTCTCAAGGAGGATCTTGTTGAATTCTTCTAGGATTTCTTTCATAATGGAATCATAATCTAATGCAAATGTGATCCTCTTAGCTCTTCTAAAAGGCTAGTGCTACTGAGGTTTCTAACTACTGCCTATTACTCTCGCTATTTGTGCTTGTAAAATCTTGGTTAGATTTCTTGTTGGGAGACTTAAAGAGGTGCTGCCCACCATGATTTCGCCTCCCAGTAAGCTTTTATTGAGGGTTGCCATATTGTAGATCCTATTTCAGGGAAAATTAGGCAGTGGACAATTGGAGGTGTAAAAAAAGAAATGGCATTGCCTTCAAGTTCAAACTCAGACACAAGAAAAGCCCATGATTAGGTGGACAGGAACTTCCTTGATAAGATCCTTGAAGTTAAAGAATGTAGATTAGAGGAATTCCTTTTTAACTGTTTGGCAATTGGAGTCCTTTTGTTAAAGCTCCCATTGTGACAGTAAACTATTCACGAATGCCGAAATTGTTAATGCTTTTAAGCATCTTGTGAGAATCTCTTGTCCTCCCCTTCTGTTTTTTTTTTTTTTTTATTATTAGTTAATGTTGCATCCTATTAATAGAAAAAATATATCTCTAAGTGTTTCCTTCCTATTTTTTGCTTATCAATGGGTGAGGAGCAAGATTCAAACTCTAGAGCCTTAAGCTAGGAACCCCTTCTCCATTTTTATTTTCCTCATCACCATTTGTCTGAGTAGACTTCTTGGGAAGGGAGTTGAGGTTGGCATTATTGAAGGTTTCCTTGTAGGAAAAAACAGAGCACGTTACTGCTTGCAATATGTGGGCAGCTCTGATACGGTAAAAAGAATTTTAACCCTTTTTAACCCTAAAATAGAGAGAACGGAGATAAATTCGAGATATATATCACTGCTTGCAATTTGTTGAGTTGAGTGCACTTATGTTTTCAATCATGGAAGATGATTGATGTGGGGTGGCTCTCCTTTCCCTTTTGCAAGTCCATGTGTTGTTGAACACACTTACGTTTTCAATCATGGAAGATGATTGATGTGGTGGCTCTTCTTTTCCTTTTGCAAAACCATGTGTTGTTGAATGCACTTATGTTTTAAATCATGGAAGATGATTGATGTGGTGGATCTTCTTTCCCTTTTGCAAGACCGTGTCTTATTGGGGAGAAGCGGCTCTAGATTTTGGTATCCTAATCCATAGGGAGGCTTCTCCTCTTGATCCTTACACATTTTGTCTCTCCCTTCTCTGGCCCAAGTTAATTTTGCTTTTGCCACTATCGGGAAAATTAAATTCCGAAGAAGATCAAACTTTTGGTATGGCAGGTTTTACTTGGCAGGGTTGACACTATGGATGGGGTTTAGTGCTGGATGGGGTTTAGTGCTATTCTTCCTTTGTGATGTCTGCAATGGTGCACCCTTTGCAGATATCAAGAGGACCTTCACCAACTACTCTAGGGTTGCCATTTTGTGCCGTTGATTTGGAGTGGATGGTTGAGTTTGTTTGGCTTACACTTGGCATGGAGGATAAATTGCTGATCACTGGCTAGCCTTTTGCTCTCATTTAGGTATCTTGAGGAACAAGTTTTCAGGGAGGCGGAGAGATTGAATGAGGAAGTCCAGGAGGGGCTTAAGTTTAATGCCTCATTATGGACGTCGGTTAAAAGATTCTCTTGTAAACCATGATCTTTGGTTTGGTTTTGTTGGGTTGAGGCCCCTTTTTGGAGTTACTCTTAGCCTCCCTCTTGCTTTTTTGTTTTTCGTTGAACTTTTTTTGTATGCCCTTGTTTTCCTTTCCTTCTTTCTCAATGGAAGTTCCATTTCTTACCCCCCCAAAAAAAACCATGGAAAATGGGAAGAGAGTTAACCTATTCAACATTATTTTTCAGGTGTCCTTTGGTTTGGAAATCTGCAGAACTAGATTTTCAGTTGTTGGCATCAACGTTGGTTCCAGAGGATCTTGGCAAAGCTACCAAAACCTGGGGTTGCTTGAAGGGCTCCTTTCCTCTTAATTATTTGGCATGGCACTTGGTTATAAACCGAAGACCTTGTCTTCTGGAACCCTTTGGTGGTGAAAGTTGAACAAATGGGGTTGCCTTACTTCAATTTAAGTTGTCCTGGCGAACTTTCCCTCTTATTTTCTCTAGGCTTTCTAAGCCCCCAAGGCTATTCTTCATCAAGCTTTCAAATCCTAATTTGGATGGAGGGCATCATCTGATATGTTGGAATTTTGTTTCTAGATGCTCGTTGGCCTTGATGTTGGGAAAATCATAGAAACAGATTCTTACAAAATGGTTTTGTCAAATTCTCAAATGGACTTGCCTTTCTCGTGAAGGATAAGAATTTGAACAAATATGACATTGGTATGAGTGGCTACCCAAGGAGTGTACATGGTGGCTATTAGCAGCCTTGGATGGGCATCAGTAGAACAGATAGCTCCTTTGGGAATACCAATGATATTGAAGCTTTAAAATAGTGCCCGAGATCAACAAAGAGTCTTCTTACAAATGGGTAGTTCATCCTGAATCTCTTTTCTAAAGGGACGAGTCTCAATCTCTGCCCTTCCAAAACAGCTTTAATTGATCAATTGTAGTCCAGAAATAAATATAGCCTTTCTCACAAAATAGCTGTGGAGGTTTGCAAATGAGCCTATTGCCCAGAGAAAAGTTGTTGCTGCCATTTATGGGGTGGGGGCTAGAGGGTGGATTCCCAAACCTATCTGAAGACCGTCCATGGGTGGGTATTGATAAAAAAACAAAGTTTTTTTTCTTTCTTGGAGTTCGTCAAGTTTAAAGCTGAAAATGCGCTTAGAATTCGGTTTGGAAGGATATCTAGGTTGGGGATACCTCCCGCTGTTTCTATGAAGAAGACCAATCTCAAGCTTGGCATTTGAGGATGAAAAAGGGGGCCTTTTGATGGGAGATTGATGAATGGATTGATTTTCTTTGTGTGATTGATCCTGTTCGGCTGGAAGAGGGCCATGACAAGGTTAGATGGGGGATGGACGGGAATTTGTTAACAAGTCTACTTTTTTTCATTTCTTGAAACTGAATAGGCTTGTGATCTTCTTGGTGAAAGAAATCTGGAAGTTCAAGGTTCCCAAAAAAGTGAAAATTTTCCTTTGGACGTTAATCTATTGGAGCATAAACACAACAGAGATGCTCCAAGGGAAGTTACCTTCTTGGTACCTTTCCCCATAGGTGTGCAGCATTTGTATGAAAGATGAGGAATGACTAGACCATCTGTTTCTACACTGCCATTTTGCTTTTAAGGGTTTATACTTTCAATACTCTTGTTTCATATGTTATAACTGTTGTTATAACCATTGTTTTGGGATAGATAGTGGAAAAAGTACTCGCAGCAGAGTCTTGATAACATGCATATGTTTTGCATTTTTCCGTTTGATCCTTAGATCACATTACGTTGTGTTATAAATTGTCAAATTTAAAATCTGTAGAGTTCTTATTGGATGTCTCTTGTTTTCAATCAGGACCGGACTTCGGTTCACCTCCGTCATTAATCCGAAAGAAACTACTTAACATACTTGGTGAGAGTGGAAAGACATCTTCTTTCATTGATGATGTTTCAACAGTGAAGAGATATTCCTCTGAATCATCACATGCATTTCCCGTAACTTCTGACGATGAAGCTCTTTCAAGGGCAAAAAAGGAGGTTGGCTAGCTGCTGATTGTAGATGTCTGAACTTTCATTTATAACTGATATCTAATAGTTTGTTTGTGCCTATTATTGCTCTAGGCAATGAATGAAAAAGTTCACTTCATCTGGACACAGTTTTCAGAATTGACTTCTTACCATAAGAAGCAGGCAGATGATGAAGAAAGATTAAATGTCAAGCTTGCAGAGTTGCTGTCATTACTTACGTGTGATACAAAATCTGTCAACAAGAAGAGGAACAGCCCCAAGATCTCTGTTGAACTGCGGGAAATTTTGGCTCGGATGGATTCTAGAATCAATGACCTCTATACCTCTTTGCCTACTAATGCTATGCTTATCACATGCACTGGTCACGGTGACATAGCACTTGTACAGAGGTATGTGAATAATGCATCTGAAATCTTTCCTTTCCATTTATTATGGTAAATTCTGACTGCTTCCAAGTATCAAAGTTTCCGTTTGATAGAACAGGAGAAAATAACAAAGAATTTAGCAATTATTAAAACATGGATGATAAAATACTGCAGGAAAACAATGTCATGCAAGTTAACATGTAGACTACCTTTATGTGTTACAGGAGTTTGCACTTTCTGCCTGCTCCCTTGGACTTATTCGTGTAGTAATGACCTCAGGTTAATGAAAAAATTGTTAGCTGGGCTCAATGTGCATTATGGCTATAAATTGTGATAAAGAAAAAGTCCTTAGGTGTAAATTAGCAAAAAAGAAATAAGAAAAGTAGAAGGAAGAAAGAAGAAAAACTCCTTAGATGGATAATGTAATTAGCTGAAAAACTCCTTAGATGGGTTGAAGGTTTTGTTATGGCCTTCCTTTGCGCTATATTATTGGTCTTTGTTTTCACCATATCCCCAAAGACAACTATTTGGGATCTGATTGCTGAAAAGATGATTGGTTTGTTGAAAGGGGTATTAGTATTGGTTGGAACCCACAACCTTCAACAATTGGTTATATCTCCCCCACCCGCAATAAGGTTATGCAGCAGGCTGAGTGGTAAAAAATACCATGAGTTTAATAAAGAACTTAGAGGGAATTAGTTTAGTCTATGGTAGCCACTTATCTAAGATTTAATATCCTACAAGTTCTTTGAGACCCAAATGTTGTAGGATTAGGCGGGTTGTCCCGTAAGATTAGTCGTTGTGTGCGTAAGCTGGCATGGATATTCATGAATATCAAAATTGAAAAGAGAGAGATGAAGCATAGGAATTTTAGAGGCTCAATAGAGATATGGGGAGGAGATATAGGAGTTGGCTCGATTTAATTCTTAAGAGTTGGCTCGATTTAATTCTTAATACTTCTTTATGAGCATATGTTAAACAGGTTACATGTTTGATCACTACATCTAGTTGGAAAATTTGTAAATTTGTAGGAAATAATATCTTAAGTAGGGAACTATCAATACCTTAAGAGTTTGAATCTATTTTTTCGAAATACTTTTATGGTCATGTTGTATCAATTCACACAAATTTCTGCATCAGCATTAATCATGAACTTCGTTAGGAGTTTAGTTTTTAAACAATATCTCATGTTTGGACCGCTATCTATATGGATGTAGATTGAGAAAAATGCTACAGGAGCAGAGTGAAACAAGCATATGCCGTGAGAAGATTGTTAAGATCTTGGAAGAGCTCCATGCCCAAGCTGAAGTAGCGTTGTGTTTTGTATGTATAAAACATTGA

mRNA sequence

ATGCCGTCTTCCAGTGTTTCAGCTTTGGATTCCGAAGACGAGGGCAAGTCGAAGCCCAGCTTCTTCGATATATATGGAACCGATGCCAAAGCTGAGGTTCTCTTCAAAAATCCAGAATCTAATTCAACTTTAAGTCTGCAAGATGTTCAAGGGCTTGTTACTTGGGTGCTTGCTGAAGGTTTCATGCCGCCGTGGGTTTTTATCAAGAACAAACCCCTAATCCCAAAAGTGGTTATGGTTTATCTCCCTGGCCTGGATGCTGCTCTGTACATGTCACAGTCCAAGATACTTCCTACATTTAAAAGATTCTGCGGCAGTCCTAGGGCAGTTTTAGCTCTTAGCTGTATATCAGATAGAATGCAAACAATTGATGCACTTTTGACGTGTAAGGTAAAGAGAAAGAGGAATGCAAACAATGTAGACATAAAGAATAAATTGACTTCTCAACCAGAAATATCTGATCTTGAAAAAGAAGCACCAATATCTATCAAGCTCCCAAAGGAGTTACCTTTCCCTGTAACATATTATACGCTAACTACCAAAGCATTGGAAGACAATGGTTATCCTTTCAATCAACCAGGTTTTATCCAAACACTTCGCGCTCCTGTGGGATCTTCACCTAATGAAATGTTGGCACTGGACTGTGAGATGGGTTCGGAAATTCCTCAAGTTGCTAAAGCTGCTTTACCTCTTTGGACGGATGGCTACCCAAGGTTTAGTGGAATTACATGTGAGATGTTAAGTGGGGTGACCACTAGGCTGGAAGATGTTCAGAGAGATTTTTTAAATCTGGTTCACAAGGAGACTGTTTTAGTTGGCCATTCGCTGGAAAATGACCTGATGGCATTGAAGATCTCTCATGATCTGGTGGTTGATACTGCAGTACTATATAAGCATCCTCGTGGCGGTTCTCATAAATCTGCCCTTCGGATTCTTGCTAAAAGATTTCTTTCCAAGGAGATTCAACAATCCGGAAATGGCCATGATAGTATTGAGGATGCAAGAGCTACTATGGAACTTGCACTTCTTAAAATTAAACATGGCAAACTTCTTGGGAAGGGAGTTGAGGTTGGCATTATTGAAGGTTTCCTTGTAGGAAAAAACAGAGCACGTTACTGCTTGCAATATGTGGGCAGCTCTGATACGGCTTGTGATCTTCTTGGTGAAAGAAATCTGGAAGTTCAAGGTTCCCAAAAAAGTGAAAATTTTCCTTTGGACGTTAATCTATTGGAGCATAAACACAACAGAGATGCTCCAAGGGAAGTTACCTTCTTGGTACCTTTCCCCATAGGACCGGACTTCGGTTCACCTCCGTCATTAATCCGAAAGAAACTACTTAACATACTTGGTGAGAGTGGAAAGACATCTTCTTTCATTGATGATGTTTCAACAGTGAAGAGATATTCCTCTGAATCATCACATGCATTTCCCGTAACTTCTGACGATGAAGCTCTTTCAAGGGCAAAAAAGGAGGCAATGAATGAAAAAGTTCACTTCATCTGGACACAGTTTTCAGAATTGACTTCTTACCATAAGAAGCAGGCAGATGATGAAGAAAGATTAAATGTCAAGCTTGCAGAGTTGCTGTCATTACTTACGTGTGATACAAAATCTGTCAACAAGAAGAGGAACAGCCCCAAGATCTCTGTTGAACTGCGGGAAATTTTGGCTCGGATGGATTCTAGAATCAATGACCTCTATACCTCTTTGCCTACTAATGCTATGCTTATCACATGCACTGGTCACGGTGACATAGCACTTGTACAGAGATTGAGAAAAATGCTACAGGAGCAGAGTGAAACAAGCATATGCCGTGAGAAGATTGTTAAGATCTTGGAAGAGCTCCATGCCCAAGCTGAAGTAGCGTTGTGTTTTGTATGTATAAAACATTGA

Coding sequence (CDS)

ATGCCGTCTTCCAGTGTTTCAGCTTTGGATTCCGAAGACGAGGGCAAGTCGAAGCCCAGCTTCTTCGATATATATGGAACCGATGCCAAAGCTGAGGTTCTCTTCAAAAATCCAGAATCTAATTCAACTTTAAGTCTGCAAGATGTTCAAGGGCTTGTTACTTGGGTGCTTGCTGAAGGTTTCATGCCGCCGTGGGTTTTTATCAAGAACAAACCCCTAATCCCAAAAGTGGTTATGGTTTATCTCCCTGGCCTGGATGCTGCTCTGTACATGTCACAGTCCAAGATACTTCCTACATTTAAAAGATTCTGCGGCAGTCCTAGGGCAGTTTTAGCTCTTAGCTGTATATCAGATAGAATGCAAACAATTGATGCACTTTTGACGTGTAAGGTAAAGAGAAAGAGGAATGCAAACAATGTAGACATAAAGAATAAATTGACTTCTCAACCAGAAATATCTGATCTTGAAAAAGAAGCACCAATATCTATCAAGCTCCCAAAGGAGTTACCTTTCCCTGTAACATATTATACGCTAACTACCAAAGCATTGGAAGACAATGGTTATCCTTTCAATCAACCAGGTTTTATCCAAACACTTCGCGCTCCTGTGGGATCTTCACCTAATGAAATGTTGGCACTGGACTGTGAGATGGGTTCGGAAATTCCTCAAGTTGCTAAAGCTGCTTTACCTCTTTGGACGGATGGCTACCCAAGGTTTAGTGGAATTACATGTGAGATGTTAAGTGGGGTGACCACTAGGCTGGAAGATGTTCAGAGAGATTTTTTAAATCTGGTTCACAAGGAGACTGTTTTAGTTGGCCATTCGCTGGAAAATGACCTGATGGCATTGAAGATCTCTCATGATCTGGTGGTTGATACTGCAGTACTATATAAGCATCCTCGTGGCGGTTCTCATAAATCTGCCCTTCGGATTCTTGCTAAAAGATTTCTTTCCAAGGAGATTCAACAATCCGGAAATGGCCATGATAGTATTGAGGATGCAAGAGCTACTATGGAACTTGCACTTCTTAAAATTAAACATGGCAAACTTCTTGGGAAGGGAGTTGAGGTTGGCATTATTGAAGGTTTCCTTGTAGGAAAAAACAGAGCACGTTACTGCTTGCAATATGTGGGCAGCTCTGATACGGCTTGTGATCTTCTTGGTGAAAGAAATCTGGAAGTTCAAGGTTCCCAAAAAAGTGAAAATTTTCCTTTGGACGTTAATCTATTGGAGCATAAACACAACAGAGATGCTCCAAGGGAAGTTACCTTCTTGGTACCTTTCCCCATAGGACCGGACTTCGGTTCACCTCCGTCATTAATCCGAAAGAAACTACTTAACATACTTGGTGAGAGTGGAAAGACATCTTCTTTCATTGATGATGTTTCAACAGTGAAGAGATATTCCTCTGAATCATCACATGCATTTCCCGTAACTTCTGACGATGAAGCTCTTTCAAGGGCAAAAAAGGAGGCAATGAATGAAAAAGTTCACTTCATCTGGACACAGTTTTCAGAATTGACTTCTTACCATAAGAAGCAGGCAGATGATGAAGAAAGATTAAATGTCAAGCTTGCAGAGTTGCTGTCATTACTTACGTGTGATACAAAATCTGTCAACAAGAAGAGGAACAGCCCCAAGATCTCTGTTGAACTGCGGGAAATTTTGGCTCGGATGGATTCTAGAATCAATGACCTCTATACCTCTTTGCCTACTAATGCTATGCTTATCACATGCACTGGTCACGGTGACATAGCACTTGTACAGAGATTGAGAAAAATGCTACAGGAGCAGAGTGAAACAAGCATATGCCGTGAGAAGATTGTTAAGATCTTGGAAGAGCTCCATGCCCAAGCTGAAGTAGCGTTGTGTTTTGTATGTATAAAACATTGA

Protein sequence

MPSSSVSALDSEDEGKSKPSFFDIYGTDAKAEVLFKNPESNSTLSLQDVQGLVTWVLAEGFMPPWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRAVLALSCISDRMQTIDALLTCKVKRKRNANNVDIKNKLTSQPEISDLEKEAPISIKLPKELPFPVTYYTLTTKALEDNGYPFNQPGFIQTLRAPVGSSPNEMLALDCEMGSEIPQVAKAALPLWTDGYPRFSGITCEMLSGVTTRLEDVQRDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGHDSIEDARATMELALLKIKHGKLLGKGVEVGIIEGFLVGKNRARYCLQYVGSSDTACDLLGERNLEVQGSQKSENFPLDVNLLEHKHNRDAPREVTFLVPFPIGPDFGSPPSLIRKKLLNILGESGKTSSFIDDVSTVKRYSSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSELTSYHKKQADDEERLNVKLAELLSLLTCDTKSVNKKRNSPKISVELREILARMDSRINDLYTSLPTNAMLITCTGHGDIALVQRLRKMLQEQSETSICREKIVKILEELHAQAEVALCFVCIKH

Homology

[Close]

BLAST of HG10003717 vs. NCBI nr
Match: XP_038886453.1 (small RNA degrading nuclease 5 [Benincasa hispida])

HSP 1 Score: 931.8 bits (2407), Expect = 3.1e-267
Identity = 508/655 (77.56%), Postives = 521/655 (79.54%), Query Frame = 0


Query: 1   MPSSSVSALDSEDEGKS-------KPSFFDIYGTDAKAEVLFKNPESNSTLSLQDVQGLV 60
           MPSSSVSALD  DEGKS       K SFFDIYGTDAKAEVLFK PESNSTLSLQDVQGLV
Sbjct: 1   MPSSSVSALDCVDEGKSNAGKTQEKSSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLV 60

Query: 61  TWVLAEGFMPPWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRAVLAL 120
           TWVLAEGFMP WVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRAVLAL
Sbjct: 61  TWVLAEGFMPQWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRAVLAL 120

Query: 121 SCISDRMQTIDALLTCKVKRKRNANNVDIKNKLTSQPEISDLEKEAPISIKLPKELPFPV 180
           SCISDRMQTIDALLTCKVKRKR+ N+VDIKNKLTS+PEIS LEKEAPISIKLPKELPFP+
Sbjct: 121 SCISDRMQTIDALLTCKVKRKRDENSVDIKNKLTSEPEISGLEKEAPISIKLPKELPFPI 180

Query: 181 TYYTLTTKALEDNGYPFNQPGFIQTLRAPVGSSPNEMLALDCEM-----GSEIPQVA--- 240
           TYYTLT KALEDNGYPFNQPGFIQTL APVGSSPNEMLALDCEM     G E+ ++    
Sbjct: 181 TYYTLTAKALEDNGYPFNQPGFIQTLPAPVGSSPNEMLALDCEMCVTCEGFELTRITLVD 240

Query: 241 --------KAALP--LWTDGYPRFSGITCEMLSGVTTRLEDVQRDFLNLVHKETVLVGHS 300
                   K   P     D   RFSGITCEMLS VTT L+DVQRDFLNLVHKETVLVGHS
Sbjct: 241 IEGRVVLDKLVKPSNAIVDYNTRFSGITCEMLSEVTTSLKDVQRDFLNLVHKETVLVGHS 300

Query: 301 LENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGHDSIEDAR 360
           LENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGHDSIEDAR
Sbjct: 301 LENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGHDSIEDAR 360

Query: 361 ATMELALLKIKHGKLLGKGVEVGIIEGFLVGKNRARYCLQYVGSSDTACDLLGERNLEVQ 420
           ATMELALLKIKH                                                
Sbjct: 361 ATMELALLKIKH------------------------------------------------ 420

Query: 421 GSQKSENFPLDVNLLEHKHNRDAPREVTFLVPFPIGPDFGSPPSLIRKKLLNILGESGKT 480
                                              GPDFGSPPSLIRKKLLNILGESGKT
Sbjct: 421 -----------------------------------GPDFGSPPSLIRKKLLNILGESGKT 480

Query: 481 SSFIDDVSTVKRYSSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSELTSYHKKQA 540
           SSFID++STVKRYSSES+HAFPVTSDDEALSRAKKEAMNE+VHFIWTQFSEL SYHKKQA
Sbjct: 481 SSFIDNISTVKRYSSESTHAFPVTSDDEALSRAKKEAMNERVHFIWTQFSELNSYHKKQA 540

Query: 541 DDEERLNVKLAELLSLLTCDTKSVNKKRNSPKISVELREILARMDSRINDLYTSLPTNAM 600
           DDEERLNVKLAELLSLLTCDTK+VNKKRNSPKIS ELREILARMDSRINDLYTSLPTNAM
Sbjct: 541 DDEERLNVKLAELLSLLTCDTKTVNKKRNSPKISAELREILARMDSRINDLYTSLPTNAM 572

Query: 601 LITCTGHGDIALVQRLRKMLQEQSETSICREKIVKILEELHAQAEVALCFVCIKH 631
           LI CTGHGDIALVQRLRKMLQEQSETSICREKIVKILEELHAQAEVALCFVCIKH
Sbjct: 601 LIICTGHGDIALVQRLRKMLQEQSETSICREKIVKILEELHAQAEVALCFVCIKH 572

[Close]

BLAST of HG10003717 vs. NCBI nr
Match: XP_008466693.1 (PREDICTED: small RNA degrading nuclease 5 [Cucumis melo] >TYK24791.1 small RNA degrading nuclease 5 [Cucumis melo var. makuwa])

HSP 1 Score: 916.4 bits (2367), Expect = 1.4e-262
Identity = 499/655 (76.18%), Postives = 513/655 (78.32%), Query Frame = 0


Query: 1   MPSSSVSALDSEDEGKS-------KPSFFDIYGTDAKAEVLFKNPESNSTLSLQDVQGLV 60
           MPSSSVS LDSEDEGKS       KP FFDIYG DAKAEVLFK PESNSTLSLQDVQ LV
Sbjct: 1   MPSSSVSGLDSEDEGKSNVGKTQEKPCFFDIYGADAKAEVLFKTPESNSTLSLQDVQQLV 60

Query: 61  TWVLAEGFMPPWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRAVLAL 120
           TWVLAEGFMP WVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFK+FCGSPRAVLAL
Sbjct: 61  TWVLAEGFMPRWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKKFCGSPRAVLAL 120

Query: 121 SCISDRMQTIDALLTCKVKRKRNANNVDIKNKLTSQPEISDLEKEAPISIKLPKELPFPV 180
           SCISDRMQTIDALLTCKVKRKR+AN VD+ NKLTS+PEIS LEKEAPISI+LPKELPFPV
Sbjct: 121 SCISDRMQTIDALLTCKVKRKRDANKVDLNNKLTSEPEISGLEKEAPISIQLPKELPFPV 180

Query: 181 TYYTLTTKALEDNGYPFNQPGFIQTLRAPVGSSPNEMLALDCEM-----GSEIPQVA--- 240
           TYYTLT K LEDNGYPFNQPGFIQTL AP G SPNEMLALDCEM     G E+ ++    
Sbjct: 181 TYYTLTAKQLEDNGYPFNQPGFIQTLPAPEGCSPNEMLALDCEMCVTCEGFELTRITLVD 240

Query: 241 --------KAALP--LWTDGYPRFSGITCEMLSGVTTRLEDVQRDFLNLVHKETVLVGHS 300
                   K   P     D   RFSGITCEMLSGVTT LEDVQRDFLNLVHKETVLVGHS
Sbjct: 241 MEGQVLLDKLVKPSNAIVDYNTRFSGITCEMLSGVTTSLEDVQRDFLNLVHKETVLVGHS 300

Query: 301 LENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGHDSIEDAR 360
           LENDL+ALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLS+EIQQSGNGHDSIEDAR
Sbjct: 301 LENDLIALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSGNGHDSIEDAR 360

Query: 361 ATMELALLKIKHGKLLGKGVEVGIIEGFLVGKNRARYCLQYVGSSDTACDLLGERNLEVQ 420
           ATMELALLKIKH                                                
Sbjct: 361 ATMELALLKIKH------------------------------------------------ 420

Query: 421 GSQKSENFPLDVNLLEHKHNRDAPREVTFLVPFPIGPDFGSPPSLIRKKLLNILGESGKT 480
                                              GPDFGSPPSLIRKKLLNILGE GKT
Sbjct: 421 -----------------------------------GPDFGSPPSLIRKKLLNILGECGKT 480

Query: 481 SSFIDDVSTVKRYSSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSELTSYHKKQA 540
           SSFIDD+STVKRYSSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSEL SYHKKQ 
Sbjct: 481 SSFIDDISTVKRYSSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSELNSYHKKQV 540

Query: 541 DDEERLNVKLAELLSLLTCDTKSVNKKRNSPKISVELREILARMDSRINDLYTSLPTNAM 600
           DDEE+LNVKLAELLSLLTCDTKSVNKKRN  KISVEL+EILARMDSRINDLYTSLPTNAM
Sbjct: 541 DDEEKLNVKLAELLSLLTCDTKSVNKKRNRAKISVELQEILARMDSRINDLYTSLPTNAM 572

Query: 601 LITCTGHGDIALVQRLRKMLQEQSETSICREKIVKILEELHAQAEVALCFVCIKH 631
           LI CTGHGDIALVQRLRKMLQEQSETSICREKIVK+LEELHAQAEVALCFVC KH
Sbjct: 601 LIICTGHGDIALVQRLRKMLQEQSETSICREKIVKVLEELHAQAEVALCFVCTKH 572

[Close]

BLAST of HG10003717 vs. NCBI nr
Match: XP_004146782.1 (small RNA degrading nuclease 5 [Cucumis sativus] >KAE8647276.1 hypothetical protein Csa_003184 [Cucumis sativus])

HSP 1 Score: 912.1 bits (2356), Expect = 2.6e-261
Identity = 496/655 (75.73%), Postives = 513/655 (78.32%), Query Frame = 0


Query: 1   MPSSSVSALDSEDEGKS-------KPSFFDIYGTDAKAEVLFKNPESNSTLSLQDVQGLV 60
           MPSSSVS LDSED+G+S       KPSFFDIYG DAKAE+LFK PESNSTLSLQDVQ LV
Sbjct: 1   MPSSSVSGLDSEDDGQSNVGKTQEKPSFFDIYGADAKAEILFKTPESNSTLSLQDVQELV 60

Query: 61  TWVLAEGFMPPWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRAVLAL 120
            WVLAEGFMP WVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFK+FCGSPRAVLAL
Sbjct: 61  NWVLAEGFMPRWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKKFCGSPRAVLAL 120

Query: 121 SCISDRMQTIDALLTCKVKRKRNANNVDIKNKLTSQPEISDLEKEAPISIKLPKELPFPV 180
           SCISDRMQTIDALLTCKVKRKR+AN VD+KNKLTS+PEIS LEKEAPISIKLPKELPFPV
Sbjct: 121 SCISDRMQTIDALLTCKVKRKRDANKVDLKNKLTSEPEISGLEKEAPISIKLPKELPFPV 180

Query: 181 TYYTLTTKALEDNGYPFNQPGFIQTLRAPVGSSPNEMLALDCEM-----GSEIPQVA--- 240
           TYYTLT KALEDNGYPFNQPGFIQTL AP G SPNEMLALDCEM     G E+ ++    
Sbjct: 181 TYYTLTAKALEDNGYPFNQPGFIQTLPAPEGCSPNEMLALDCEMCVTCEGFELTRITLVD 240

Query: 241 --------KAALP--LWTDGYPRFSGITCEMLSGVTTRLEDVQRDFLNLVHKETVLVGHS 300
                   K   P     D   R+SGITCEMLSGVTT LEDVQR FLNLVHKETVLVGHS
Sbjct: 241 MEGRVLLDKLVKPSNAIVDYNTRYSGITCEMLSGVTTSLEDVQRIFLNLVHKETVLVGHS 300

Query: 301 LENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGHDSIEDAR 360
           LENDLMAL+ISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLS+EIQQSGNGHDSIEDAR
Sbjct: 301 LENDLMALRISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSGNGHDSIEDAR 360

Query: 361 ATMELALLKIKHGKLLGKGVEVGIIEGFLVGKNRARYCLQYVGSSDTACDLLGERNLEVQ 420
           ATMELALLKIKH                                                
Sbjct: 361 ATMELALLKIKH------------------------------------------------ 420

Query: 421 GSQKSENFPLDVNLLEHKHNRDAPREVTFLVPFPIGPDFGSPPSLIRKKLLNILGESGKT 480
                                              GPDFGSPPSLIRKKLLNILGESGKT
Sbjct: 421 -----------------------------------GPDFGSPPSLIRKKLLNILGESGKT 480

Query: 481 SSFIDDVSTVKRYSSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSELTSYHKKQA 540
           SSFIDD++TVKRY SESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSEL SYHKKQ 
Sbjct: 481 SSFIDDIATVKRYCSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSELNSYHKKQV 540

Query: 541 DDEERLNVKLAELLSLLTCDTKSVNKKRNSPKISVELREILARMDSRINDLYTSLPTNAM 600
           DDEE+LNVKLAELLSLLTCDTKSVNKKRN  KISVEL+EILARMDSRINDLYTSLPTNAM
Sbjct: 541 DDEEKLNVKLAELLSLLTCDTKSVNKKRNRAKISVELQEILARMDSRINDLYTSLPTNAM 572

Query: 601 LITCTGHGDIALVQRLRKMLQEQSETSICREKIVKILEELHAQAEVALCFVCIKH 631
           LI CTGHGDI LVQRLRKMLQEQSETSICREKIVKILEELHAQAEVALCFVC KH
Sbjct: 601 LIICTGHGDITLVQRLRKMLQEQSETSICREKIVKILEELHAQAEVALCFVCTKH 572

[Close]

BLAST of HG10003717 vs. NCBI nr
Match: XP_022937364.1 (small RNA degrading nuclease 5-like [Cucurbita moschata])

HSP 1 Score: 892.1 bits (2304), Expect = 2.8e-255
Identity = 483/658 (73.40%), Postives = 514/658 (78.12%), Query Frame = 0


Query: 1   MPSSSVSALDSEDEGKS----------KPSFFDIYGTDAKAEVLFKNPESNSTLSLQDVQ 60
           MPSSSVSALD+++EGKS          KPSFFDIYGTDAKAEVLFK PESNSTLSLQDVQ
Sbjct: 1   MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ 60

Query: 61  GLVTWVLAEGFMPPWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRAV 120
           GLVTWVLAEGFMP WVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPR V
Sbjct: 61  GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPV 120

Query: 121 LALSCISDRMQTIDALLTCKVKRKRNANNVDIKNKLTSQPEISDLEKEAPISIKLPKELP 180
           LALSCISDRMQTIDALLTCKVKRKR+AN+VD+KNKLTS+ EI   EK++PISIKLPKELP
Sbjct: 121 LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELP 180

Query: 181 FPVTYYTLTTKALEDNGYPFNQPGFIQTLRAPVGSSPNEMLALDCEM-----GSEIPQVA 240
           FPVTYYTLT K LEDNGYPFNQPGFIQTL AP+GSSP EMLALDCEM     G E+ ++ 
Sbjct: 181 FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEMCVTCEGFELTRIT 240

Query: 241 -----------KAALP--LWTDGYPRFSGITCEMLSGVTTRLEDVQRDFLNLVHKETVLV 300
                      K   P     D   RFSGITCEML+ VTT LEDVQ+DFLNLVHKETVLV
Sbjct: 241 LVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV 300

Query: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGHDSIE 360
           GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLS+EIQQS NGH+S+E
Sbjct: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHNSVE 360

Query: 361 DARATMELALLKIKHGKLLGKGVEVGIIEGFLVGKNRARYCLQYVGSSDTACDLLGERNL 420
           DARATMELALLKIKH                                             
Sbjct: 361 DARATMELALLKIKH--------------------------------------------- 420

Query: 421 EVQGSQKSENFPLDVNLLEHKHNRDAPREVTFLVPFPIGPDFGSPPSLIRKKLLNILGES 480
                                                 GP+FGSPPSL+RKKLLNILGES
Sbjct: 421 --------------------------------------GPEFGSPPSLVRKKLLNILGES 480

Query: 481 GKTSSFIDDVSTVKRYSSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSELTSYHK 540
           GKTSSFIDDVSTVKRYSSESSHAFPVTSDDEAL++AKKEAMNE+VHF+WTQFSEL SYHK
Sbjct: 481 GKTSSFIDDVSTVKRYSSESSHAFPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHK 540

Query: 541 KQADDEERLNVKLAELLSLLTCDTKSVNKKRNSPKISVELREILARMDSRINDLYTSLPT 600
           KQADD+ERLNVKLAELLSL+TCDTKSV+KKRNSPKI VELREILA +DSRI+ LY SLPT
Sbjct: 541 KQADDDERLNVKLAELLSLVTCDTKSVSKKRNSPKICVELREILAHIDSRIDSLYASLPT 575

Query: 601 NAMLITCTGHGDIALVQRLRKMLQEQSETSICREKIVKILEELHAQAEVALCFVCIKH 631
           NAMLI CTGHGDIALVQRLRKML EQSETSICR+K+VKILEELHAQAEVALCFVCIKH
Sbjct: 601 NAMLIMCTGHGDIALVQRLRKMLVEQSETSICRDKVVKILEELHAQAEVALCFVCIKH 575

[Close]

BLAST of HG10003717 vs. NCBI nr
Match: XP_023534811.1 (small RNA degrading nuclease 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 889.4 bits (2297), Expect = 1.8e-254
Identity = 482/658 (73.25%), Postives = 512/658 (77.81%), Query Frame = 0


Query: 1   MPSSSVSALDSEDEGKS----------KPSFFDIYGTDAKAEVLFKNPESNSTLSLQDVQ 60
           MPSSSVSALD+++EGKS          KPSFFDIYGTDAKAEVLFK PESNSTLSLQDVQ
Sbjct: 1   MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ 60

Query: 61  GLVTWVLAEGFMPPWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRAV 120
           GLVTWVLAEGFMP WVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPR V
Sbjct: 61  GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPV 120

Query: 121 LALSCISDRMQTIDALLTCKVKRKRNANNVDIKNKLTSQPEISDLEKEAPISIKLPKELP 180
           LALSCISDRMQTIDALLTCKVKRKR+AN+VD+KNKLTS+ EI   EK++PISIKLPKELP
Sbjct: 121 LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELP 180

Query: 181 FPVTYYTLTTKALEDNGYPFNQPGFIQTLRAPVGSSPNEMLALDCEM-----GSEIPQVA 240
           FPVTYYTLT K LEDNGYPFNQPGFIQTL AP+GSSP EMLALDCEM     G E+ ++ 
Sbjct: 181 FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEMCVTCEGFELTRIT 240

Query: 241 -----------KAALP--LWTDGYPRFSGITCEMLSGVTTRLEDVQRDFLNLVHKETVLV 300
                      K   P     D   RFSGITCEML+ VTT LEDVQ+DFLNLVHKETVLV
Sbjct: 241 LVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV 300

Query: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGHDSIE 360
           GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLS+EIQQS NGHDS+E
Sbjct: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDSVE 360

Query: 361 DARATMELALLKIKHGKLLGKGVEVGIIEGFLVGKNRARYCLQYVGSSDTACDLLGERNL 420
           DARATMELALLKIKH                                             
Sbjct: 361 DARATMELALLKIKH--------------------------------------------- 420

Query: 421 EVQGSQKSENFPLDVNLLEHKHNRDAPREVTFLVPFPIGPDFGSPPSLIRKKLLNILGES 480
                                                 GP+FGSPPSL+RKKLLNILGES
Sbjct: 421 --------------------------------------GPEFGSPPSLVRKKLLNILGES 480

Query: 481 GKTSSFIDDVSTVKRYSSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSELTSYHK 540
           GK SSFIDDVSTVKRYSSESSHAFPVTSDDEAL++AKKEAMNE+VHF+WTQFSEL SYHK
Sbjct: 481 GKMSSFIDDVSTVKRYSSESSHAFPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHK 540

Query: 541 KQADDEERLNVKLAELLSLLTCDTKSVNKKRNSPKISVELREILARMDSRINDLYTSLPT 600
           KQADDEERLNVKLAELLSL+TCDTKSV+KKRNSPKI VE REILAR+DSRI+ LY SLPT
Sbjct: 541 KQADDEERLNVKLAELLSLVTCDTKSVSKKRNSPKICVEQREILARIDSRIDSLYASLPT 575

Query: 601 NAMLITCTGHGDIALVQRLRKMLQEQSETSICREKIVKILEELHAQAEVALCFVCIKH 631
           NAMLI CTGHGDIALVQRLRKML E+SETSICR+K+VKI EELHAQAEVALCFVCIKH
Sbjct: 601 NAMLIICTGHGDIALVQRLRKMLVEKSETSICRDKVVKIFEELHAQAEVALCFVCIKH 575

[Close]

BLAST of HG10003717 vs. ExPASy Swiss-Prot
Match: Q8L7M4 (Small RNA degrading nuclease 5 OS=Arabidopsis thaliana OX=3702 GN=SDN5 PE=2 SV=2)

HSP 1 Score: 588.2 bits (1515), Expect = 1.1e-166
Identity = 326/638 (51.10%), Postives = 418/638 (65.52%), Query Frame = 0


Query: 10  DSEDEGKSKPSFFDIYGTDAKAEVLFKNPESNSTLSLQDVQGLVTWVLAEGFMPPWVFIK 69
           D  D+  +  SFFDIYG +AKAE+ FK+PE  +TL+LQDVQGLVTWVLAEGFMP WVFIK
Sbjct: 19  DGTDKSNTGNSFFDIYGPEAKAELDFKSPE--TTLNLQDVQGLVTWVLAEGFMPSWVFIK 78

Query: 70  NKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRAVLALSCISDRMQTIDALLTC 129
           NKPLIPKVV++YLPGLDAALY+S SK L + K  CG+P A+LALSC+ D M+TID +LTC
Sbjct: 79  NKPLIPKVVLLYLPGLDAALYLSHSKTLSSLKSCCGNPMALLALSCVVDEMRTIDTILTC 138

Query: 130 KVKRKRNANNVDIKNKLTSQPEISDLEKEAPISIKLPKELPFPVTYYTLTTKALEDNGYP 189
           K ++K+   +      L S PE  +L  ++   ++L K++PFPV+YYTL+ K +E NGY 
Sbjct: 139 KGRKKKTVTSSVEPPPLVSSPEACNLMGKS--FVELTKDIPFPVSYYTLSQKEMEQNGYT 198

Query: 190 FNQPGFIQTLRAPVGSSPNEMLALDCEM-----GSEIPQVA-----------KAALPL-- 249
           F +     TL AP GS P E++ALDCEM     G E+ +V            K  +P   
Sbjct: 199 FEKLELTPTLPAPSGSCPPEIVALDCEMCITKEGLELTRVTLVDIQGQVLLDKLVMPTNP 258

Query: 250 WTDGYPRFSGITCEMLSGVTTRLEDVQRDFLNLVHKETVLVGHSLENDLMALKISHDLVV 309
            TD   R+SGIT  M+ GVTT L+D+Q +FL LV KET+LVGHSLENDL++LKISH+LV+
Sbjct: 259 ITDYNTRYSGITAVMMEGVTTTLKDIQEEFLKLVFKETILVGHSLENDLLSLKISHNLVI 318

Query: 310 DTAVLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGHDSIEDARATMELALLKIKHGKLL 369
           DTAVLYKHP G S+K+ LRILAK+FL++EIQ+S +GHDS EDA+A M+LALLKIKH    
Sbjct: 319 DTAVLYKHPHGRSYKTKLRILAKKFLAREIQESESGHDSAEDAKAAMDLALLKIKH---- 378

Query: 370 GKGVEVGIIEGFLVGKNRARYCLQYVGSSDTACDLLGERNLEVQGSQKSENFPLDVNLLE 429
                                                                       
Sbjct: 379 ------------------------------------------------------------ 438

Query: 430 HKHNRDAPREVTFLVPFPIGPDFGSPPSLIRKKLLNILGESGKTSSFIDDVSTVKRYSSE 489
                              GPDFGSPP +IRKKLL +L ESGKT+S ID+++ VKRY+SE
Sbjct: 439 -------------------GPDFGSPPEVIRKKLLAVLNESGKTTSIIDNINIVKRYASE 498

Query: 490 SSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSELTSYHKKQADDEERLNVKLAELLSL 549
           SS+A PV+SDDEALS+A KE  N++  F+WTQFSEL ++ + +ADD ++LN +LAE++SL
Sbjct: 499 SSNAIPVSSDDEALSKAVKEVKNKRSQFVWTQFSELNAHFQSRADDPQKLNSRLAEMISL 558

Query: 550 LTCDTKSVNKKRNSPKISVELREILARMDSRINDLYTSLPTNAMLITCTGHGDIALVQRL 609
           LTC+ KS  KK N   +S E +EIL +M+ R+  LY +LPTNAM I CTGHGD ++V R+
Sbjct: 559 LTCNKKSGLKKSN---VSPETKEILKKMNERVQSLYAALPTNAMFIVCTGHGDTSIVHRV 566

Query: 610 RKMLQEQSETSICREKIVKILEELHAQAEVALCFVCIK 630
           RKML+++ E    REK+VK+LEEL AQAEVALCFV IK
Sbjct: 619 RKMLKDEDEIGFDREKLVKVLEELQAQAEVALCFVGIK 566

[Close]

BLAST of HG10003717 vs. ExPASy Swiss-Prot
Match: O94443 (Uncharacterized exonuclease C637.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC637.09 PE=3 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 1.0e-31
Identity = 157/618 (25.40%), Postives = 252/618 (40.78%), Query Frame = 0


Query: 44  LSLQDVQGLVTWVLAEGFMPPWVFIKNKPLIPKVVMVYLPGLDAALYMSQ-------SKI 103
           L + D+Q LV W LA+G  P WV ++NK +I + V++ +PGL+ + +  Q       S +
Sbjct: 100 LKISDLQELVFWCLADGQAPSWVLVRNKQMIHRAVILLVPGLEPSQFGFQPVRGNKHSFL 159

Query: 104 LPTFKRFCGSPRAVLALSCISDRMQTIDALLTCKVKRKR----NANNVDIKNKLTS-QPE 163
           LP      G  +       + D  +  D     +    R    +  N  +++ L++ Q +
Sbjct: 160 LPNLLNENGPIQ-------LPDFCEVFDRAWPTRSPGDRFRVFSPVNAFLQSPLSNEQKK 219

Query: 164 ISDLEKEAPISIKLPKELPFPVTYYTLTTKALEDNGYPFN----------QPGFIQTLRA 223
             D E  A  S   P +       Y ++ ++  ++ YP +          QP        
Sbjct: 220 KRDKETRAMASFSKPSD-------YLMSYESFIEDEYPLHPTVMKGEEVTQPSGWVASAG 279

Query: 224 PVGSSP--NEMLALDCEM-----GSEIPQV--------------AKAALPLWTDGYPRFS 283
              S P   ++LA+DCEM     G EI +V               K   P+ TD   ++S
Sbjct: 280 DFHSPPINPKILAIDCEMVRTENGLEIARVTIVDMKSEVIYDEFVKPESPV-TDYVTQYS 339

Query: 284 GITCEMLSGVTTRLEDVQRDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKHP 343
           GIT E L  VTT L DVQ      V   TVL+GHSL +DL  LK +H  ++DTA +Y H 
Sbjct: 340 GITEEKLRNVTTVLSDVQSYLKKTVDNNTVLLGHSLNSDLNCLKFTHPHIIDTANIYNHT 399

Query: 344 RGGSHKSALRILAKRFLSKEIQQSGN-GHDSIEDARATMELALLKIKHGKLLGKGVEVGI 403
           RG   K +L+ LA ++L +EIQ++G  GHDS EDA A ++L  LK+K+G   G       
Sbjct: 400 RGPPSKPSLKWLATKWLRREIQKAGALGHDSAEDALACVDLLKLKVKNGPAFGL------ 459

Query: 404 IEGFLVGKNRARYCLQYVGSSDTACDLLGERNLEVQGSQKSENFPLDVNLLEHKHNRDAP 463
                                                      F  D   + H+ +R  P
Sbjct: 460 -------------------------------------------FNQDFESIFHRLSRQQP 519

Query: 464 REVTFLVPFPIGPDFGSPPSLIRKKLLNILGESGKTSSFIDDVSTVKRYSSESSHAFPVT 523
             +   +      D+G+P S I K                            +  +    
Sbjct: 520 TPLIGAI-----ADYGNPESCIGK---------------------------AAHKSVSCA 579

Query: 524 SDDEALSRAKKEAMNEKVHFIWTQFSELTSYHKKQADDEERLNVKLAELLSLLTCDTKSV 583
           +DDE +S     ++++  +F+W +F EL    +  A      N K          DT + 
Sbjct: 580 NDDEVVSAV--VSLSDMHNFVWGRFREL----EHAAMWNANRNTKQEN-----NSDTDTE 609

Query: 584 NKKRNSPKISVELREILARMDSRINDLYTSLPTNAMLITCTGHG---DIALVQRLRKMLQ 615
           N      +++      L R + RI  LY SLP  ++L+  TG G   +++ +  +R+  +
Sbjct: 640 NDSVEEDQVT-SYSSALERFNRRIRLLYDSLPKGSLLLLYTGTGNPIEMSKLNAIRQQFR 609

[Close]

BLAST of HG10003717 vs. ExPASy Swiss-Prot
Match: P53331 (RNA exonuclease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RNH70 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 6.4e-29
Identity = 102/345 (29.57%), Postives = 166/345 (48.12%), Query Frame = 0


Query: 44  LSLQDVQGLVTWVL-AEGFMPPWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKIL----- 103
           + ++DV+ +  ++L AE   P W+ I N+  + K++++++PGL    + +          
Sbjct: 65  IGIKDVRDMTQYLLQAENNSPKWIDICNRSSLQKMIVLFIPGLQPDDFENGKNTFNEISD 124

Query: 104 PTFKRFCGSPRAVLALSCISDRMQTIDALLTCKVKRKRNANNVDIKNKLTSQPEISDLEK 163
             FK   G          I+    T   +         +  N  I   L+   +I+ L+ 
Sbjct: 125 DNFKYIPGE---------IASTFHTFPVMAPGSKMTLFSPYNSFINVGLSKMEKINKLK- 184

Query: 164 EAPISIKLPKELPFPVTYYTLTTKALEDNGYPFN------QPGFIQTLRAPVGSSPNEML 223
                 +L K+    +    L+ + L  N YP +         ++QT+    G S   + 
Sbjct: 185 ------ELQKKKKITINDLVLSEQQLVANDYPLDSGDTNFDTDWVQTVDFTHGGS--HIF 244

Query: 224 ALDCEM-----------------GSEI--PQVAKAALPLWTDGYPRFSGITCEMLS-GVT 283
           ALDCEM                  +E+   ++ K  +P+  D   R+SGIT E L+ G  
Sbjct: 245 ALDCEMCLSEQGLVLTRISLVNFDNEVIYEELVKPDVPI-VDYLTRYSGITEEKLTVGAK 304

Query: 284 TRLEDVQRDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRI 343
             L +VQ+D L ++ +  +L+GHSL+NDL  +K+ H LVVDTA++Y H  G   K +L+ 
Sbjct: 305 KTLREVQKDLLKIISRSDILIGHSLQNDLKVMKLKHPLVVDTAIIYHHKAGDPFKPSLKY 364

Query: 344 LAKRFLSKEIQQSGNG-HDSIEDARATMELALLKIKHGKLLGKGV 356
           L++ FL+K IQ   NG HDS+EDARA +EL  LKI +G   G G+
Sbjct: 365 LSETFLNKSIQ---NGEHDSVEDARACLELTKLKILNGLAFGIGI 387

[Close]

BLAST of HG10003717 vs. ExPASy Swiss-Prot
Match: Q8N1G1 (RNA exonuclease 1 homolog OS=Homo sapiens OX=9606 GN=REXO1 PE=1 SV=3)

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-20
Identity = 63/172 (36.63%), Postives = 93/172 (54.07%), Query Frame = 0


Query: 194  GFIQTLRAPV-GSSPNEMLALDCEM-----GSEIPQVAKAALPLW-------------TD 253
            GF++T    + G +   + ALDCEM     G E+ +V      +               D
Sbjct: 1043 GFVKTFEKELSGDTHPGIYALDCEMSYTTYGLELTRVTVVDTDVHVVYDTFVKPDNEIVD 1102

Query: 254  GYPRFSGITCEMLSGVTTRLEDVQRDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTA 313
               RFSG+T   L+  +  L DVQ   L++   +T+L+GHSLE+DL+ALK+ H  VVDT+
Sbjct: 1103 YNTRFSGVTEADLADTSVTLRDVQAVLLSMFSADTILIGHSLESDLLALKVIHSTVVDTS 1162

Query: 314  VLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGHDSIEDARATMELALLKIK 347
            VL+ H  G  +K +LR L   +L + IQ + +GH S EDA A M L + K++
Sbjct: 1163 VLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDAGACMHLVIWKVR 1214

[Close]

BLAST of HG10003717 vs. ExPASy Swiss-Prot
Match: Q7TT28 (RNA exonuclease 1 homolog OS=Mus musculus OX=10090 GN=Rexo1 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-20
Identity = 65/180 (36.11%), Postives = 95/180 (52.78%), Query Frame = 0


Query: 186  NGYPFNQPGFIQTLRAPVGSSPNE-MLALDCEM-----GSEIPQVAKAALPLW------- 245
            +G   N  GF++T +  +    +  + ALDCEM     G E+ +V      +        
Sbjct: 1027 DGRKENLEGFVRTFQKELPEDAHAGVFALDCEMSYTTYGLELTRVTVVDTDMQVVYDTFV 1086

Query: 246  ------TDGYPRFSGITCEMLSGVTTRLEDVQRDFLNLVHKETVLVGHSLENDLMALKIS 305
                   D   RFSG+T   L   +  L DVQ   L++   +T+L+GHSLE+DL+ALK+ 
Sbjct: 1087 KPDNEVVDYNTRFSGVTEADLVDTSITLRDVQAVLLSMFSADTILIGHSLESDLLALKVI 1146

Query: 306  HDLVVDTAVLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGHDSIEDARATMELALLKIK 347
            H  VVDT+VL+ H  G  +K +LR L   +L + IQ + +GH S EDA A M L + KI+
Sbjct: 1147 HGTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDASACMHLVIWKIR 1206

[Close]

BLAST of HG10003717 vs. ExPASy TrEMBL
Match: A0A5D3DMF7 (Small RNA degrading nuclease 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00380 PE=4 SV=1)

HSP 1 Score: 916.4 bits (2367), Expect = 6.6e-263
Identity = 499/655 (76.18%), Postives = 513/655 (78.32%), Query Frame = 0


Query: 1   MPSSSVSALDSEDEGKS-------KPSFFDIYGTDAKAEVLFKNPESNSTLSLQDVQGLV 60
           MPSSSVS LDSEDEGKS       KP FFDIYG DAKAEVLFK PESNSTLSLQDVQ LV
Sbjct: 1   MPSSSVSGLDSEDEGKSNVGKTQEKPCFFDIYGADAKAEVLFKTPESNSTLSLQDVQQLV 60

Query: 61  TWVLAEGFMPPWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRAVLAL 120
           TWVLAEGFMP WVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFK+FCGSPRAVLAL
Sbjct: 61  TWVLAEGFMPRWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKKFCGSPRAVLAL 120

Query: 121 SCISDRMQTIDALLTCKVKRKRNANNVDIKNKLTSQPEISDLEKEAPISIKLPKELPFPV 180
           SCISDRMQTIDALLTCKVKRKR+AN VD+ NKLTS+PEIS LEKEAPISI+LPKELPFPV
Sbjct: 121 SCISDRMQTIDALLTCKVKRKRDANKVDLNNKLTSEPEISGLEKEAPISIQLPKELPFPV 180

Query: 181 TYYTLTTKALEDNGYPFNQPGFIQTLRAPVGSSPNEMLALDCEM-----GSEIPQVA--- 240
           TYYTLT K LEDNGYPFNQPGFIQTL AP G SPNEMLALDCEM     G E+ ++    
Sbjct: 181 TYYTLTAKQLEDNGYPFNQPGFIQTLPAPEGCSPNEMLALDCEMCVTCEGFELTRITLVD 240

Query: 241 --------KAALP--LWTDGYPRFSGITCEMLSGVTTRLEDVQRDFLNLVHKETVLVGHS 300
                   K   P     D   RFSGITCEMLSGVTT LEDVQRDFLNLVHKETVLVGHS
Sbjct: 241 MEGQVLLDKLVKPSNAIVDYNTRFSGITCEMLSGVTTSLEDVQRDFLNLVHKETVLVGHS 300

Query: 301 LENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGHDSIEDAR 360
           LENDL+ALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLS+EIQQSGNGHDSIEDAR
Sbjct: 301 LENDLIALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSGNGHDSIEDAR 360

Query: 361 ATMELALLKIKHGKLLGKGVEVGIIEGFLVGKNRARYCLQYVGSSDTACDLLGERNLEVQ 420
           ATMELALLKIKH                                                
Sbjct: 361 ATMELALLKIKH------------------------------------------------ 420

Query: 421 GSQKSENFPLDVNLLEHKHNRDAPREVTFLVPFPIGPDFGSPPSLIRKKLLNILGESGKT 480
                                              GPDFGSPPSLIRKKLLNILGE GKT
Sbjct: 421 -----------------------------------GPDFGSPPSLIRKKLLNILGECGKT 480

Query: 481 SSFIDDVSTVKRYSSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSELTSYHKKQA 540
           SSFIDD+STVKRYSSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSEL SYHKKQ 
Sbjct: 481 SSFIDDISTVKRYSSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSELNSYHKKQV 540

Query: 541 DDEERLNVKLAELLSLLTCDTKSVNKKRNSPKISVELREILARMDSRINDLYTSLPTNAM 600
           DDEE+LNVKLAELLSLLTCDTKSVNKKRN  KISVEL+EILARMDSRINDLYTSLPTNAM
Sbjct: 541 DDEEKLNVKLAELLSLLTCDTKSVNKKRNRAKISVELQEILARMDSRINDLYTSLPTNAM 572

Query: 601 LITCTGHGDIALVQRLRKMLQEQSETSICREKIVKILEELHAQAEVALCFVCIKH 631
           LI CTGHGDIALVQRLRKMLQEQSETSICREKIVK+LEELHAQAEVALCFVC KH
Sbjct: 601 LIICTGHGDIALVQRLRKMLQEQSETSICREKIVKVLEELHAQAEVALCFVCTKH 572

[Close]

BLAST of HG10003717 vs. ExPASy TrEMBL
Match: A0A1S3CT45 (small RNA degrading nuclease 5 OS=Cucumis melo OX=3656 GN=LOC103504042 PE=4 SV=1)

HSP 1 Score: 916.4 bits (2367), Expect = 6.6e-263
Identity = 499/655 (76.18%), Postives = 513/655 (78.32%), Query Frame = 0


Query: 1   MPSSSVSALDSEDEGKS-------KPSFFDIYGTDAKAEVLFKNPESNSTLSLQDVQGLV 60
           MPSSSVS LDSEDEGKS       KP FFDIYG DAKAEVLFK PESNSTLSLQDVQ LV
Sbjct: 1   MPSSSVSGLDSEDEGKSNVGKTQEKPCFFDIYGADAKAEVLFKTPESNSTLSLQDVQQLV 60

Query: 61  TWVLAEGFMPPWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRAVLAL 120
           TWVLAEGFMP WVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFK+FCGSPRAVLAL
Sbjct: 61  TWVLAEGFMPRWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKKFCGSPRAVLAL 120

Query: 121 SCISDRMQTIDALLTCKVKRKRNANNVDIKNKLTSQPEISDLEKEAPISIKLPKELPFPV 180
           SCISDRMQTIDALLTCKVKRKR+AN VD+ NKLTS+PEIS LEKEAPISI+LPKELPFPV
Sbjct: 121 SCISDRMQTIDALLTCKVKRKRDANKVDLNNKLTSEPEISGLEKEAPISIQLPKELPFPV 180

Query: 181 TYYTLTTKALEDNGYPFNQPGFIQTLRAPVGSSPNEMLALDCEM-----GSEIPQVA--- 240
           TYYTLT K LEDNGYPFNQPGFIQTL AP G SPNEMLALDCEM     G E+ ++    
Sbjct: 181 TYYTLTAKQLEDNGYPFNQPGFIQTLPAPEGCSPNEMLALDCEMCVTCEGFELTRITLVD 240

Query: 241 --------KAALP--LWTDGYPRFSGITCEMLSGVTTRLEDVQRDFLNLVHKETVLVGHS 300
                   K   P     D   RFSGITCEMLSGVTT LEDVQRDFLNLVHKETVLVGHS
Sbjct: 241 MEGQVLLDKLVKPSNAIVDYNTRFSGITCEMLSGVTTSLEDVQRDFLNLVHKETVLVGHS 300

Query: 301 LENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGHDSIEDAR 360
           LENDL+ALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLS+EIQQSGNGHDSIEDAR
Sbjct: 301 LENDLIALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSGNGHDSIEDAR 360

Query: 361 ATMELALLKIKHGKLLGKGVEVGIIEGFLVGKNRARYCLQYVGSSDTACDLLGERNLEVQ 420
           ATMELALLKIKH                                                
Sbjct: 361 ATMELALLKIKH------------------------------------------------ 420

Query: 421 GSQKSENFPLDVNLLEHKHNRDAPREVTFLVPFPIGPDFGSPPSLIRKKLLNILGESGKT 480
                                              GPDFGSPPSLIRKKLLNILGE GKT
Sbjct: 421 -----------------------------------GPDFGSPPSLIRKKLLNILGECGKT 480

Query: 481 SSFIDDVSTVKRYSSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSELTSYHKKQA 540
           SSFIDD+STVKRYSSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSEL SYHKKQ 
Sbjct: 481 SSFIDDISTVKRYSSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSELNSYHKKQV 540

Query: 541 DDEERLNVKLAELLSLLTCDTKSVNKKRNSPKISVELREILARMDSRINDLYTSLPTNAM 600
           DDEE+LNVKLAELLSLLTCDTKSVNKKRN  KISVEL+EILARMDSRINDLYTSLPTNAM
Sbjct: 541 DDEEKLNVKLAELLSLLTCDTKSVNKKRNRAKISVELQEILARMDSRINDLYTSLPTNAM 572

Query: 601 LITCTGHGDIALVQRLRKMLQEQSETSICREKIVKILEELHAQAEVALCFVCIKH 631
           LI CTGHGDIALVQRLRKMLQEQSETSICREKIVK+LEELHAQAEVALCFVC KH
Sbjct: 601 LIICTGHGDIALVQRLRKMLQEQSETSICREKIVKVLEELHAQAEVALCFVCTKH 572

[Close]

BLAST of HG10003717 vs. ExPASy TrEMBL
Match: A0A6J1FAZ1 (small RNA degrading nuclease 5-like OS=Cucurbita moschata OX=3662 GN=LOC111443672 PE=4 SV=1)

HSP 1 Score: 892.1 bits (2304), Expect = 1.3e-255
Identity = 483/658 (73.40%), Postives = 514/658 (78.12%), Query Frame = 0


Query: 1   MPSSSVSALDSEDEGKS----------KPSFFDIYGTDAKAEVLFKNPESNSTLSLQDVQ 60
           MPSSSVSALD+++EGKS          KPSFFDIYGTDAKAEVLFK PESNSTLSLQDVQ
Sbjct: 1   MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ 60

Query: 61  GLVTWVLAEGFMPPWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRAV 120
           GLVTWVLAEGFMP WVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPR V
Sbjct: 61  GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPV 120

Query: 121 LALSCISDRMQTIDALLTCKVKRKRNANNVDIKNKLTSQPEISDLEKEAPISIKLPKELP 180
           LALSCISDRMQTIDALLTCKVKRKR+AN+VD+KNKLTS+ EI   EK++PISIKLPKELP
Sbjct: 121 LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELP 180

Query: 181 FPVTYYTLTTKALEDNGYPFNQPGFIQTLRAPVGSSPNEMLALDCEM-----GSEIPQVA 240
           FPVTYYTLT K LEDNGYPFNQPGFIQTL AP+GSSP EMLALDCEM     G E+ ++ 
Sbjct: 181 FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEMCVTCEGFELTRIT 240

Query: 241 -----------KAALP--LWTDGYPRFSGITCEMLSGVTTRLEDVQRDFLNLVHKETVLV 300
                      K   P     D   RFSGITCEML+ VTT LEDVQ+DFLNLVHKETVLV
Sbjct: 241 LVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV 300

Query: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGHDSIE 360
           GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLS+EIQQS NGH+S+E
Sbjct: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHNSVE 360

Query: 361 DARATMELALLKIKHGKLLGKGVEVGIIEGFLVGKNRARYCLQYVGSSDTACDLLGERNL 420
           DARATMELALLKIKH                                             
Sbjct: 361 DARATMELALLKIKH--------------------------------------------- 420

Query: 421 EVQGSQKSENFPLDVNLLEHKHNRDAPREVTFLVPFPIGPDFGSPPSLIRKKLLNILGES 480
                                                 GP+FGSPPSL+RKKLLNILGES
Sbjct: 421 --------------------------------------GPEFGSPPSLVRKKLLNILGES 480

Query: 481 GKTSSFIDDVSTVKRYSSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSELTSYHK 540
           GKTSSFIDDVSTVKRYSSESSHAFPVTSDDEAL++AKKEAMNE+VHF+WTQFSEL SYHK
Sbjct: 481 GKTSSFIDDVSTVKRYSSESSHAFPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHK 540

Query: 541 KQADDEERLNVKLAELLSLLTCDTKSVNKKRNSPKISVELREILARMDSRINDLYTSLPT 600
           KQADD+ERLNVKLAELLSL+TCDTKSV+KKRNSPKI VELREILA +DSRI+ LY SLPT
Sbjct: 541 KQADDDERLNVKLAELLSLVTCDTKSVSKKRNSPKICVELREILAHIDSRIDSLYASLPT 575

Query: 601 NAMLITCTGHGDIALVQRLRKMLQEQSETSICREKIVKILEELHAQAEVALCFVCIKH 631
           NAMLI CTGHGDIALVQRLRKML EQSETSICR+K+VKILEELHAQAEVALCFVCIKH
Sbjct: 601 NAMLIMCTGHGDIALVQRLRKMLVEQSETSICRDKVVKILEELHAQAEVALCFVCIKH 575

[Close]

BLAST of HG10003717 vs. ExPASy TrEMBL
Match: A0A6J1IFC2 (small RNA degrading nuclease 5-like OS=Cucurbita maxima OX=3661 GN=LOC111473789 PE=4 SV=1)

HSP 1 Score: 877.9 bits (2267), Expect = 2.6e-251
Identity = 478/662 (72.21%), Postives = 510/662 (77.04%), Query Frame = 0


Query: 1   MPSSSVSALDSEDEGKS--------------KPSFFDIYGTDAKAEVLFKNPESNSTLSL 60
           MPSSSVSALD+++EGKS              KPSFFDIYGTDAKAEVLFK PESNSTLSL
Sbjct: 1   MPSSSVSALDAKEEGKSNVGNTEEEEEEEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSL 60

Query: 61  QDVQGLVTWVLAEGFMPPWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGS 120
           QDVQGLVTWVLAEGFMP WVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGS
Sbjct: 61  QDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGS 120

Query: 121 PRAVLALSCISDRMQTIDALLTCKVKRKRNANNVDIKNKLTSQPEISDLEKEAPISIKLP 180
           PR VLALSCISDRMQTIDALLTCKVKRKR+AN+V +KNK+TS+ EI   EK++PISIKLP
Sbjct: 121 PRPVLALSCISDRMQTIDALLTCKVKRKRDANSVGLKNKMTSEQEIFGPEKDSPISIKLP 180

Query: 181 KELPFPVTYYTLTTKALEDNGYPFNQPGFIQTLRAPVGSSPNEMLALDCEM-----GSEI 240
           KELPFPVTYYTLT K LEDNGYPFNQPGFIQTL AP+GSSP EMLALDCEM     G E+
Sbjct: 181 KELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEMCVTCEGFEL 240

Query: 241 PQVA-----------KAALP--LWTDGYPRFSGITCEMLSGVTTRLEDVQRDFLNLVHKE 300
            ++            K   P     +   RFSGITCEML+ VTT LEDVQ+D LNLVHKE
Sbjct: 241 TRITLVDMAGQIVLDKLVKPSNAIVNYNTRFSGITCEMLNEVTTSLEDVQKDLLNLVHKE 300

Query: 301 TVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGH 360
           TVLVGHSLENDLMALKISHD VVDTAVLYKHPRGGSHKSALRILAKRFLS+EIQQS NGH
Sbjct: 301 TVLVGHSLENDLMALKISHDRVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGH 360

Query: 361 DSIEDARATMELALLKIKHGKLLGKGVEVGIIEGFLVGKNRARYCLQYVGSSDTACDLLG 420
           DS+EDARATMELALLKIKH                                         
Sbjct: 361 DSVEDARATMELALLKIKH----------------------------------------- 420

Query: 421 ERNLEVQGSQKSENFPLDVNLLEHKHNRDAPREVTFLVPFPIGPDFGSPPSLIRKKLLNI 480
                                                     GP+FGSPPSL+RKKLLNI
Sbjct: 421 ------------------------------------------GPEFGSPPSLVRKKLLNI 480

Query: 481 LGESGKTSSFIDDVSTVKRYSSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSELT 540
           LGESGKTSSFIDDVSTVKRYSSESSHAFPV SDDEAL++AKKEAMN++VHF+WTQFSEL 
Sbjct: 481 LGESGKTSSFIDDVSTVKRYSSESSHAFPVISDDEALAKAKKEAMNQRVHFVWTQFSELN 540

Query: 541 SYHKKQADDEERLNVKLAELLSLLTCDTKSVNKKRNSPKISVELREILARMDSRINDLYT 600
           SYHKKQADDEERLNVKLAELLSL+TCDTKSV+KKRNSPKI VELREILAR+DSRI+ LY 
Sbjct: 541 SYHKKQADDEERLNVKLAELLSLVTCDTKSVSKKRNSPKICVELREILARIDSRIDSLYA 579

Query: 601 SLPTNAMLITCTGHGDIALVQRLRKMLQEQSETSICREKIVKILEELHAQAEVALCFVCI 631
           SLPTNAMLI CTGHGDIALVQRLRKML EQSETSICR+K+VKILEELHAQAEVAL FVCI
Sbjct: 601 SLPTNAMLIICTGHGDIALVQRLRKMLVEQSETSICRDKVVKILEELHAQAEVALFFVCI 579

[Close]

BLAST of HG10003717 vs. ExPASy TrEMBL
Match: A0A6J1EE80 (small RNA degrading nuclease 5-like OS=Cucurbita moschata OX=3662 GN=LOC111433387 PE=4 SV=1)

HSP 1 Score: 874.0 bits (2257), Expect = 3.8e-250
Identity = 476/655 (72.67%), Postives = 502/655 (76.64%), Query Frame = 0


Query: 1   MPSSSVSALDSEDEGKS-------KPSFFDIYGTDAKAEVLFKNPESNSTLSLQDVQGLV 60
           MPSS VSALDSE+EG+S        PSFFDIYGTDAKAE+LFK PESNSTLSLQDVQGLV
Sbjct: 1   MPSSGVSALDSEEEGRSDVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV 60

Query: 61  TWVLAEGFMPPWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRAVLAL 120
           TWVLAEGFMP WVFIKNKPLIPKVVMVYLPGLDAALYMSQ+KILPTFK+ CG+PRAVLAL
Sbjct: 61  TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL 120

Query: 121 SCISDRMQTIDALLTCKVKRKRNANNVDIKNKLTSQPEISDLEKEAPISIKLPKELPFPV 180
           SCISDRMQTIDALLTCKVKRKR+AN+VD+KN LTS+ E    EKE PISIKLPKELPFPV
Sbjct: 121 SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQERLGPEKETPISIKLPKELPFPV 180

Query: 181 TYYTLTTKALEDNGYPFNQPGFIQTLRAPVGSSPNEMLALDCEM-----GSEIPQVA--- 240
           TYYTLT K LEDNGYPFNQPGFI TL AP+GSSP EMLALDCEM     G E+ ++    
Sbjct: 181 TYYTLTAKELEDNGYPFNQPGFIHTLPAPIGSSPYEMLALDCEMCVTCEGFELTRITLVD 240

Query: 241 --------KAALP--LWTDGYPRFSGITCEMLSGVTTRLEDVQRDFLNLVHKETVLVGHS 300
                   K   P     D   RFSGIT EMLS VTT LEDVQ+ FLNLVHKETVL+GHS
Sbjct: 241 MEGQVVLDKLVKPSNAIVDYNTRFSGITSEMLSQVTTSLEDVQKVFLNLVHKETVLIGHS 300

Query: 301 LENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGHDSIEDAR 360
           LENDLMALKISHDLV+DTAVLYKHPRGGSHKSALRIL K+FLS+EIQQSGNGHDSIEDAR
Sbjct: 301 LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR 360

Query: 361 ATMELALLKIKHGKLLGKGVEVGIIEGFLVGKNRARYCLQYVGSSDTACDLLGERNLEVQ 420
           ATMELALLKIKH                                                
Sbjct: 361 ATMELALLKIKH------------------------------------------------ 420

Query: 421 GSQKSENFPLDVNLLEHKHNRDAPREVTFLVPFPIGPDFGSPPSLIRKKLLNILGESGKT 480
                                              GP+FGSPPSLIRKKLL +LGE+GKT
Sbjct: 421 -----------------------------------GPEFGSPPSLIRKKLLTVLGENGKT 480

Query: 481 SSFIDDVSTVKRYSSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSELTSYHKKQA 540
           SSFIDDVSTVKRYSSESSHAFPVTSDDEALSRAKKE MNE+VHFIWTQFSEL SYHKKQ 
Sbjct: 481 SSFIDDVSTVKRYSSESSHAFPVTSDDEALSRAKKEVMNERVHFIWTQFSELNSYHKKQV 540

Query: 541 DDEERLNVKLAELLSLLTCDTKSVNKKRNSPKISVELREILARMDSRINDLYTSLPTNAM 600
           DDEERLNVKLAELLSLLTCD+KSVNKKRNS KISVELREIL+RMD RI DLYTSLPTNAM
Sbjct: 541 DDEERLNVKLAELLSLLTCDSKSVNKKRNSRKISVELREILSRMDYRIKDLYTSLPTNAM 572

Query: 601 LITCTGHGDIALVQRLRKMLQEQSETSICREKIVKILEELHAQAEVALCFVCIKH 631
           LI CTGHGDIALVQRLRKML+EQSET ICREKIVKILEELHAQAEVALCF  IKH
Sbjct: 601 LIVCTGHGDIALVQRLRKMLKEQSETMICREKIVKILEELHAQAEVALCFASIKH 572

[Close]

BLAST of HG10003717 vs. TAIR 10
Match: AT5G25800.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 588.2 bits (1515), Expect = 7.9e-168
Identity = 326/638 (51.10%), Postives = 418/638 (65.52%), Query Frame = 0


Query: 10  DSEDEGKSKPSFFDIYGTDAKAEVLFKNPESNSTLSLQDVQGLVTWVLAEGFMPPWVFIK 69
           D  D+  +  SFFDIYG +AKAE+ FK+PE  +TL+LQDVQGLVTWVLAEGFMP WVFIK
Sbjct: 19  DGTDKSNTGNSFFDIYGPEAKAELDFKSPE--TTLNLQDVQGLVTWVLAEGFMPSWVFIK 78

Query: 70  NKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRAVLALSCISDRMQTIDALLTC 129
           NKPLIPKVV++YLPGLDAALY+S SK L + K  CG+P A+LALSC+ D M+TID +LTC
Sbjct: 79  NKPLIPKVVLLYLPGLDAALYLSHSKTLSSLKSCCGNPMALLALSCVVDEMRTIDTILTC 138

Query: 130 KVKRKRNANNVDIKNKLTSQPEISDLEKEAPISIKLPKELPFPVTYYTLTTKALEDNGYP 189
           K ++K+   +      L S PE  +L  ++   ++L K++PFPV+YYTL+ K +E NGY 
Sbjct: 139 KGRKKKTVTSSVEPPPLVSSPEACNLMGKS--FVELTKDIPFPVSYYTLSQKEMEQNGYT 198

Query: 190 FNQPGFIQTLRAPVGSSPNEMLALDCEM-----GSEIPQVA-----------KAALPL-- 249
           F +     TL AP GS P E++ALDCEM     G E+ +V            K  +P   
Sbjct: 199 FEKLELTPTLPAPSGSCPPEIVALDCEMCITKEGLELTRVTLVDIQGQVLLDKLVMPTNP 258

Query: 250 WTDGYPRFSGITCEMLSGVTTRLEDVQRDFLNLVHKETVLVGHSLENDLMALKISHDLVV 309
            TD   R+SGIT  M+ GVTT L+D+Q +FL LV KET+LVGHSLENDL++LKISH+LV+
Sbjct: 259 ITDYNTRYSGITAVMMEGVTTTLKDIQEEFLKLVFKETILVGHSLENDLLSLKISHNLVI 318

Query: 310 DTAVLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGHDSIEDARATMELALLKIKHGKLL 369
           DTAVLYKHP G S+K+ LRILAK+FL++EIQ+S +GHDS EDA+A M+LALLKIKH    
Sbjct: 319 DTAVLYKHPHGRSYKTKLRILAKKFLAREIQESESGHDSAEDAKAAMDLALLKIKH---- 378

Query: 370 GKGVEVGIIEGFLVGKNRARYCLQYVGSSDTACDLLGERNLEVQGSQKSENFPLDVNLLE 429
                                                                       
Sbjct: 379 ------------------------------------------------------------ 438

Query: 430 HKHNRDAPREVTFLVPFPIGPDFGSPPSLIRKKLLNILGESGKTSSFIDDVSTVKRYSSE 489
                              GPDFGSPP +IRKKLL +L ESGKT+S ID+++ VKRY+SE
Sbjct: 439 -------------------GPDFGSPPEVIRKKLLAVLNESGKTTSIIDNINIVKRYASE 498

Query: 490 SSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSELTSYHKKQADDEERLNVKLAELLSL 549
           SS+A PV+SDDEALS+A KE  N++  F+WTQFSEL ++ + +ADD ++LN +LAE++SL
Sbjct: 499 SSNAIPVSSDDEALSKAVKEVKNKRSQFVWTQFSELNAHFQSRADDPQKLNSRLAEMISL 558

Query: 550 LTCDTKSVNKKRNSPKISVELREILARMDSRINDLYTSLPTNAMLITCTGHGDIALVQRL 609
           LTC+ KS  KK N   +S E +EIL +M+ R+  LY +LPTNAM I CTGHGD ++V R+
Sbjct: 559 LTCNKKSGLKKSN---VSPETKEILKKMNERVQSLYAALPTNAMFIVCTGHGDTSIVHRV 566

Query: 610 RKMLQEQSETSICREKIVKILEELHAQAEVALCFVCIK 630
           RKML+++ E    REK+VK+LEEL AQAEVALCFV IK
Sbjct: 619 RKMLKDEDEIGFDREKLVKVLEELQAQAEVALCFVGIK 566

[Close]

BLAST of HG10003717 vs. TAIR 10
Match: AT5G05540.1 (small RNA degrading nuclease 2 )

HSP 1 Score: 83.6 bits (205), Expect = 6.3e-16
Identity = 55/189 (29.10%), Postives = 91/189 (48.15%), Query Frame = 0


Query: 188 YPFNQPGFIQTLRAPVGSSPN--EMLALDCEM-----GSE---------------IPQVA 247
           +P N   +++T        P   EM+A+DCEM     GSE               + +  
Sbjct: 118 FPSNAEDWVRTGLGKKKMEPTKIEMIAIDCEMVLCEDGSEAVVRVAAVDRDLKVILDEFV 177

Query: 248 KAALPLWTDGYPRFSGITCEMLSGVTTRLEDVQRDFLNLVHKETVLVGHSLENDLMALKI 307
           K   P+  D     +G+T + L   T  + D+Q   L  + ++T+LVG SL +DL  LK+
Sbjct: 178 KPNQPV-VDYRTFITGLTAQDLEKATISVVDIQEKLLMFISEDTILVGQSLNHDLKVLKV 237

Query: 308 SHDLVVDTAVLYKHPRGGSH------KSALRILAKRFLSKEIQQSGNGHDSIEDARATME 349
            H  V+DT++++K+   G+       + +L  L K  L  E+Q+ G  H+ + DA A M+
Sbjct: 238 DHARVIDTSLVFKYNYDGTRRPLRLKRPSLNYLCKCILGYEVQKEGVPHNCVHDAEAAMK 297

[Close]

BLAST of HG10003717 vs. TAIR 10
Match: AT5G05540.2 (small RNA degrading nuclease 2 )

HSP 1 Score: 83.6 bits (205), Expect = 6.3e-16
Identity = 55/189 (29.10%), Postives = 91/189 (48.15%), Query Frame = 0


Query: 188 YPFNQPGFIQTLRAPVGSSPN--EMLALDCEM-----GSE---------------IPQVA 247
           +P N   +++T        P   EM+A+DCEM     GSE               + +  
Sbjct: 118 FPSNAEDWVRTGLGKKKMEPTKIEMIAIDCEMVLCEDGSEAVVRVAAVDRDLKVILDEFV 177

Query: 248 KAALPLWTDGYPRFSGITCEMLSGVTTRLEDVQRDFLNLVHKETVLVGHSLENDLMALKI 307
           K   P+  D     +G+T + L   T  + D+Q   L  + ++T+LVG SL +DL  LK+
Sbjct: 178 KPNQPV-VDYRTFITGLTAQDLEKATISVVDIQEKLLMFISEDTILVGQSLNHDLKVLKV 237

Query: 308 SHDLVVDTAVLYKHPRGGSH------KSALRILAKRFLSKEIQQSGNGHDSIEDARATME 349
            H  V+DT++++K+   G+       + +L  L K  L  E+Q+ G  H+ + DA A M+
Sbjct: 238 DHARVIDTSLVFKYNYDGTRRPLRLKRPSLNYLCKCILGYEVQKEGVPHNCVHDAEAAMK 297

[Close]

BLAST of HG10003717 vs. TAIR 10
Match: AT3G50100.1 (small RNA degrading nuclease 1 )

HSP 1 Score: 78.6 bits (192), Expect = 2.0e-14
Identity = 40/108 (37.04%), Postives = 62/108 (57.41%), Query Frame = 0


Query: 240 SGITCEMLSGVTTRLEDVQRDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKH 299
           +GIT E +   +  + D+Q      +   T+LVGHSL  DL  LKI H  V+DTA+++K+
Sbjct: 189 TGITAEDIENASLSVVDIQETLQPFLSTGTILVGHSLNRDLEVLKIDHPKVIDTALVFKY 248

Query: 300 PRGGS-HKSALRILAKRFLSKEIQQSGNGHDSIEDARATMELALLKIK 347
           P      + +L  L K  L  E++++G  HD + DA A M+LAL  ++
Sbjct: 249 PNTRKLRRPSLNNLCKSILGYEVRKTGVPHDCVHDASAAMKLALAVVE 296

[Close]

BLAST of HG10003717 vs. TAIR 10
Match: AT5G67240.1 (small RNA degrading nuclease 3 )

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-13
Identity = 47/160 (29.38%), Postives = 77/160 (48.12%), Query Frame = 0


Query: 210 MLALDCEM-----GSE---------------IPQVAKAALPLWTDGYPRFSGITCEMLSG 269
           ML++DCEM     GS+               + +  K   P+  D     +G+T E L  
Sbjct: 145 MLSIDCEMVTCEDGSQALVRVGAVDRDLKVVLDKFVKPDKPV-IDYKTDITGVTAEDLER 204

Query: 270 VTTRLEDVQRDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKH-PRGGSHKSA 329
            T  + D+Q+     +   T+LVGH L NDL  L+I H  V+DT+ +++      + + +
Sbjct: 205 ATLSVADIQKKLRRFLSVGTILVGHGLHNDLQVLRIDHARVIDTSYVFEFVDAPKTQRPS 264

Query: 330 LRILAKRFLSKEIQQSGNGHDSIEDARATMELALLKIKHG 349
           L  L K  L +E++  G  H+ + DA A M+L L  ++ G
Sbjct: 265 LNNLCKSVLGQEVRMDGAAHNCVHDAAAAMKLVLAAVEKG 303

The following BLAST results are available for this feature:

BLAST of HG10003717 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886453.1	3.1e-267	77.56	small RNA degrading nuclease 5 [Benincasa hispida]	[more]
XP_008466693.1	1.4e-262	76.18	PREDICTED: small RNA degrading nuclease 5 [Cucumis melo] >TYK24791.1 small RNA d...	[more]
XP_004146782.1	2.6e-261	75.73	small RNA degrading nuclease 5 [Cucumis sativus] >KAE8647276.1 hypothetical prot...	[more]
XP_022937364.1	2.8e-255	73.40	small RNA degrading nuclease 5-like [Cucurbita moschata]	[more]
XP_023534811.1	1.8e-254	73.25	small RNA degrading nuclease 5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10003717 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7M4	1.1e-166	51.10	Small RNA degrading nuclease 5 OS=Arabidopsis thaliana OX=3702 GN=SDN5 PE=2 SV=2	[more]
O94443	1.0e-31	25.40	Uncharacterized exonuclease C637.09 OS=Schizosaccharomyces pombe (strain 972 / A...	[more]
P53331	6.4e-29	29.57	RNA exonuclease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=55...	[more]
Q8N1G1	1.9e-20	36.63	RNA exonuclease 1 homolog OS=Homo sapiens OX=9606 GN=REXO1 PE=1 SV=3	[more]
Q7TT28	1.9e-20	36.11	RNA exonuclease 1 homolog OS=Mus musculus OX=10090 GN=Rexo1 PE=1 SV=1	[more]

BLAST of HG10003717 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DMF7	6.6e-263	76.18	Small RNA degrading nuclease 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CT45	6.6e-263	76.18	small RNA degrading nuclease 5 OS=Cucumis melo OX=3656 GN=LOC103504042 PE=4 SV=1	[more]
A0A6J1FAZ1	1.3e-255	73.40	small RNA degrading nuclease 5-like OS=Cucurbita moschata OX=3662 GN=LOC11144367...	[more]
A0A6J1IFC2	2.6e-251	72.21	small RNA degrading nuclease 5-like OS=Cucurbita maxima OX=3661 GN=LOC111473789 ...	[more]
A0A6J1EE80	3.8e-250	72.67	small RNA degrading nuclease 5-like OS=Cucurbita moschata OX=3662 GN=LOC11143338...	[more]

BLAST of HG10003717 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25800.1	7.9e-168	51.10	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G05540.1	6.3e-16	29.10	small RNA degrading nuclease 2	[more]
AT5G05540.2	6.3e-16	29.10	small RNA degrading nuclease 2	[more]
AT3G50100.1	2.0e-14	37.04	small RNA degrading nuclease 1	[more]
AT5G67240.1	1.7e-13	29.38	small RNA degrading nuclease 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 209..350 e-value: 1.0E-17 score: 74.8
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 233..340 e-value: 9.0E-5 score: 23.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 231..352 e-value: 1.4E-33 score: 117.9
None	No IPR available	PANTHER	PTHR12801	RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED	coord: 237..350
None	No IPR available	PANTHER	PTHR12801	RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED	coord: 431..615 coord: 12..219
None	No IPR available	PANTHER	PTHR12801:SF115	LD29573P	coord: 237..350 coord: 431..615 coord: 12..219
IPR034922	RNA exonuclease 1-like, exonuclease domain	CDD	cd06145	REX1_like	coord: 238..342 e-value: 2.18004E-56 score: 185.767
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 211..346

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10003717.1	HG10003717.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004527	exonuclease activity
molecular_function	GO:0003676	nucleic acid binding