HG10003656 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10003656
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSenescence-associated protein
LocationChr08: 4986749 .. 4990321 (-)
RNA-Seq ExpressionHG10003656
SyntenyHG10003656
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTGCCAGCCACGATCGGGACAACGACGTCTCCACAGGCATAACAAAGGCCTGGGCTTAGGCCACCGTCTCAATCCGCATCGGTCCATGCCCCAAGTCGATCGGCGGACCGGCTCGTCACCGTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCATTTTCATCTTTCCTTCACGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGCGGCTGCATTCCCAAACAACCCGACTCATTGACAGCGCCTCGTGGTGCGACAGGAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCAGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATAGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCACCGACACGATGGTCGTGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACGGGCGGAGCCTGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTTGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCAGATACCATCAAATAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCGGAATTAGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAACATATGACTACTGGCAGGATCAACCAGGTAGCATTCCTACACGACGTCGTAGCCCGCATGCCGTCACCTACTGGCATCCGTTAGGACAACAGAGGGCGCCAGATTAACGCGGGGAGCGAACGTCATTCGTCGAAACAATCTGTAAAGGCAACACGTTTGAGAGACTTCTCAAGCATATCATGCCGCCGAATGCACCGCATCCGAGAGAGTGAGCACCGACGACGCGGCCCGCACGAGCCTTGGAAAGGCCGAAGTGGAACGCGACGCGGGCTTTGGGGTTCGTCGTGCACCCAACGAGGGGTGCGGACAGAAAATGACTAACGAGACACGACACTTCCATCACGTGAGGTACTGATGCAAGAACCGATCGATTGCGGCCGCTCGAAATACTTCAGGGCACGTCAATGAGGAGGAGCTGACGCTGACAGTTCGATGCCCGAGCATCGAGCCTACCGACCCAAACTACAGAATCACCACTCACGCGCCGTACGCATTCGAGCCCGGGCAATGCTCGACTATCCGCACCCCTACAGAAAAGCAAGGGTGCAGAGTCGTCGGGCGAGGTCGAGCACGCAACGCCGTGCGCGGTCTTTCCTTTCCCTTTCCATTCTCGATCACTTTAGTTTTGTTTCCGTCCACACCCCAAGAAACATTCTACCAGAGATAAGAAAAATTATAATGTAATTCTTCCTGAATAAATAGAAAAATATAAGAAGATGAGAAGATGAAAAAGTACTTATATTAATGAAATTGCTACTATTTATTTGATTTTAGTATTCTTTTTTATTTAATGCGATTGTTAATCCATGTATTTAAAGAAATCTATTCATGCGTAAAAATTAATTATGTAGTAGCATTTTTAAAATAGAATCCTAAAGCTAAGGAGGGTTTATATTGATTTACTTATCAAAGTTTATGTTTAAATTTTTTGAAAACCTTGTAGAGATGGAAAGGACATTTGCTTTTGTGTCGGGAAAGAAAATTCTTATTTAAAGTGTGGCTCAGGCTATGCCAACTTATGTTATGGGTTGTTTTAGGCTTTACTTCGAGGTCGTTCCTAGGTTTTATGTGTTTATTTAGTGATTTTGTAGGTATCGAGCACTTGAGAGGTAGATTCGGGCGTTAATGACAAAAAGAGCTAAAATGAGCTAAAATGGAGCTCAAATGCATCAACCGGAAAAGGAGTAGAAATGATTAAATTGACACTAAGGGCATGGCATGACGATGCAGCTCGACGTCCAAACCCGAGAGCAAGCTTTCTCTAAATTGCATTTGGCGCCGCAACGCTACGAAGTGAAGAAGCAAACGTGCACGCTGCAGAGCTACCGTAATGCTGCGATACGACTCCCTCCACCCAAGAGCGTGATATTGAAGAGCACTGCGGAGCCATGCCGATTTCTATAAATATGTTCTTAGCCTCCTAGGTTAAGTGGAGTTTGCCACCGGCCGAATTTCTATAGTTTTCCTCTCCATTTTCTTCTATTCTTTGAGCTTGGAATGTATTAAAATAATTTCCCCTTGATTGTCATGTGGATTATGGGCTAAGGTATTCGGTCTTGTTGTGTTCTTAAGATTTCTCCTCTTTTTCATGTAAACTTGTGAGGATTTGAATTTGGTTTCCCTATGTATGTGATTTCTTTCTTGAATTAAATTAATAGATTTTGATTAACTATCTTGCAATTGTCTGACAAACGTATTGTGGATATGAAATCAATAGCTAGGGTTGAATTGTAATATGTGACATGTAATTGTGTTTTAACCCAAAAGTAGCAAAATGTTAGGTTAGCTTGTGATCCAGTTGTCTATAATGGTGAATATTGTTCTAATGGACCTAGGAAGAAATCGTATGAATTATTAAAGGCTTTTCTTGTTAGATATTCAACTTAACTTTGGTCTAGATCATAATGCAATTAGGGCAAATTGAATTCGCATGCTTCTCATCTATTCGGTTTGGACTAATTAGTTAATTAGGACAATTAATTAGCTAAGCTATTTAGTGCAAACAAATAATTGAAATCAAGTAAGAAGAATTCTATGATCAAGTAAAATGAATTGGGAAAATCTAAATAAAACCCAAGCTAGACATTTTTCTCATTGATTACAACACTTGCTTTATTTACCTTTTATGCAATTTATTTTTCTTGTATTCAAACATCACTCTCAAACCTCCCTTCGGTTACCTAGGATTGCGAGTATTTTATTAGAAAAACTAATCAGTTCCCTATAATCGACCCGTTGCTACCACTACTATGCCTTTTGATATGAATGGAATTTATTTGATCCGAAGTTGACGACAAACTCTATGTCGATCAGACTCTAGAACAGATTGTAGAAAAATATCAGGCTAAGAGGATTTGAAAGGTTCTATATTACAACTTGAAATCAGGTTGATTTTCATTGTGTTGGTCGACGTGTTTGGGTGGATAAATTTCTGAAGCTTTCGGTGGATGATTTTCTCTTACTTGTGTTGGGGTTTGGGCTATTTGGGGGGACTGCAACAAGTTTCATCATCAAGAATCTCTTCCTTAGTTTGATTTTCGATGTGAGTGGATTGTTGATTATTTATGTACCTATTTGGATTCTATTTCTTCAACATATGATGTTTGTCCGGGGTCTTTGGTGTTAAGTTTGTTTGGTATTCCAAGGTCTTCAGTCATGTATGTGGATGCTTCTTATCATGAAGGGGGAGATGTTGCTGAGTTTGGAATTGTCCTACTGAATGAGTCTATAGAGGTCCAGACTGCTTCCTATGGCTTCTAG

mRNA sequence

ATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTGCCAGCCACGATCGGGACAACGACGTCTCCACAGGCATAACAAAGGCCTGGGCTTAGGCCACCGTCTCAATCCGCATCGGTCCATGCCCCAAGTCGATCGGCGGACCGGCTCGTCACCGTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCATTTTCATCTTTCCTTCACGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGCGGCTGCATTCCCAAACAACCCGACTCATTGACAGCGCCTCGTGGTGCGACAGGAGGATTGGGGGGAGATGTTGCTGAGTTTGGAATTGTCCTACTGAATGAGTCTATAGAGGTCCAGACTGCTTCCTATGGCTTCTAG

Coding sequence (CDS)

ATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTGCCAGCCACGATCGGGACAACGACGTCTCCACAGGCATAACAAAGGCCTGGGCTTAGGCCACCGTCTCAATCCGCATCGGTCCATGCCCCAAGTCGATCGGCGGACCGGCTCGTCACCGTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCATTTTCATCTTTCCTTCACGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGCGGCTGCATTCCCAAACAACCCGACTCATTGACAGCGCCTCGTGGTGCGACAGGAGGATTGGGGGGAGATGTTGCTGAGTTTGGAATTGTCCTACTGAATGAGTCTATAGAGGTCCAGACTGCTTCCTATGGCTTCTAG

Protein sequence

MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSPIFSLGQNLPPDCGCIPKQPDSLTAPRGATGGLGGDVAEFGIVLLNESIEVQTASYGF
Homology
[Close]
BLAST of HG10003656 vs. NCBI nr
Match: XP_022933354.1 (uncharacterized protein LOC111440692 [Cucurbita moschata])

HSP 1 Score: 245.4 bits (625), Expect = 3.4e-61
Identity = 118/130 (90.77%), Postives = 121/130 (93.08%), Query Frame = 0 

Query: 1   MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRL 60
           MPGARRCRS PEGA CQPRSG+RRLH+ NKGLG G RLNPHRSMPQVD RTG  PFHIRL
Sbjct: 20  MPGARRCRSTPEGACCQPRSGRRRLHKRNKGLGFGRRLNPHRSMPQVDWRTGLPPFHIRL 79

Query: 61  GHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSPIFSLGQNLPPDCGCIPKQPD 120
           GHIAGPHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSPIFSLGQNLPPD GCIPKQPD
Sbjct: 80  GHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPD 139

Query: 121 SLTAPRGATG 131
           SLTAPRGATG
Sbjct: 140 SLTAPRGATG 149

[Close]
BLAST of HG10003656 vs. NCBI nr
Match: XP_023520622.1 (uncharacterized protein LOC111784033 [Cucurbita pepo subsp. pepo] >XP_023522132.1 uncharacterized protein LOC111786016 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 242.7 bits (618), Expect = 2.2e-60
Identity = 117/130 (90.00%), Postives = 121/130 (93.08%), Query Frame = 0 

Query: 1   MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRL 60
           MPGARRCRS P+GA CQPRSG+RRLH+ NKGLG G RLNPHRSMPQVD RTG SPFHIRL
Sbjct: 1   MPGARRCRSTPKGACCQPRSGRRRLHKRNKGLGFGRRLNPHRSMPQVDWRTGLSPFHIRL 60

Query: 61  GHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSPIFSLGQNLPPDCGCIPKQPD 120
            HIAGPHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSPIFSLGQNLPPD GCIPKQPD
Sbjct: 61  EHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPD 120

Query: 121 SLTAPRGATG 131
           SLTAPRGATG
Sbjct: 121 SLTAPRGATG 130

[Close]
BLAST of HG10003656 vs. NCBI nr
Match: XP_023552350.1 (uncharacterized protein LOC111810043 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 242.7 bits (618), Expect = 2.2e-60
Identity = 117/130 (90.00%), Postives = 121/130 (93.08%), Query Frame = 0 

Query: 1   MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRL 60
           MPGARRCRS P+GA CQPRSG+RRLH+ NKGLG G RLNPHRSMPQVD RTG SPFHIRL
Sbjct: 20  MPGARRCRSTPKGACCQPRSGRRRLHKRNKGLGFGRRLNPHRSMPQVDWRTGLSPFHIRL 79

Query: 61  GHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSPIFSLGQNLPPDCGCIPKQPD 120
            HIAGPHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSPIFSLGQNLPPD GCIPKQPD
Sbjct: 80  EHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPD 139

Query: 121 SLTAPRGATG 131
           SLTAPRGATG
Sbjct: 140 SLTAPRGATG 149

[Close]
BLAST of HG10003656 vs. NCBI nr
Match: XP_022975713.1 (uncharacterized protein LOC111475769 [Cucurbita maxima])

HSP 1 Score: 239.6 bits (610), Expect = 1.8e-59
Identity = 116/130 (89.23%), Postives = 119/130 (91.54%), Query Frame = 0 

Query: 1   MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRL 60
           MPGARRCRS PEGA CQPRSG+RRLH+ NKGLG G RLNPHRSMPQVD RTG  PFHIRL
Sbjct: 20  MPGARRCRSTPEGACCQPRSGRRRLHKRNKGLGFGRRLNPHRSMPQVDWRTGLPPFHIRL 79

Query: 61  GHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSPIFSLGQNLPPDCGCIPKQPD 120
           GHI GPHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSPIFSLGQNLPPD G IPKQPD
Sbjct: 80  GHIVGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGYIPKQPD 139

Query: 121 SLTAPRGATG 131
           SLTAPRGATG
Sbjct: 140 SLTAPRGATG 149

[Close]
BLAST of HG10003656 vs. NCBI nr
Match: GBC10051.1 (hypothetical protein RclHR1_00930029 [Rhizophagus clarus])

HSP 1 Score: 191.8 bits (486), Expect = 4.4e-45
Identity = 92/121 (76.03%), Postives = 101/121 (83.47%), Query Frame = 0 

Query: 1   MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRL 60
           +PGARRCR  P GA CQP+  +RRLHR     G G R NPHRS P+VDR+TG +PFHIR 
Sbjct: 20  VPGARRCRGTPRGACCQPQLTRRRLHRRIYNPGFGRRTNPHRSTPRVDRQTGLTPFHIRP 79

Query: 61  GHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSPIFSLGQNLPPDCGCIPKQPD 120
           G IA PHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSP+FSLG+NLPPD GCIPKQPD
Sbjct: 80  GRIADPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRNLPPDWGCIPKQPD 139

Query: 121 S 122
           S
Sbjct: 140 S 140

[Close]
BLAST of HG10003656 vs. ExPASy TrEMBL
Match: A0A6J1EZI8 (uncharacterized protein LOC111440692 OS=Cucurbita moschata OX=3662 GN=LOC111440692 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.6e-61
Identity = 118/130 (90.77%), Postives = 121/130 (93.08%), Query Frame = 0 

Query: 1   MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRL 60
           MPGARRCRS PEGA CQPRSG+RRLH+ NKGLG G RLNPHRSMPQVD RTG  PFHIRL
Sbjct: 20  MPGARRCRSTPEGACCQPRSGRRRLHKRNKGLGFGRRLNPHRSMPQVDWRTGLPPFHIRL 79

Query: 61  GHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSPIFSLGQNLPPDCGCIPKQPD 120
           GHIAGPHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSPIFSLGQNLPPD GCIPKQPD
Sbjct: 80  GHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPD 139

Query: 121 SLTAPRGATG 131
           SLTAPRGATG
Sbjct: 140 SLTAPRGATG 149

[Close]
BLAST of HG10003656 vs. ExPASy TrEMBL
Match: A0A6J1IK28 (uncharacterized protein LOC111475769 OS=Cucurbita maxima OX=3661 GN=LOC111475769 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 8.9e-60
Identity = 116/130 (89.23%), Postives = 119/130 (91.54%), Query Frame = 0 

Query: 1   MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRL 60
           MPGARRCRS PEGA CQPRSG+RRLH+ NKGLG G RLNPHRSMPQVD RTG  PFHIRL
Sbjct: 20  MPGARRCRSTPEGACCQPRSGRRRLHKRNKGLGFGRRLNPHRSMPQVDWRTGLPPFHIRL 79

Query: 61  GHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSPIFSLGQNLPPDCGCIPKQPD 120
           GHI GPHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSPIFSLGQNLPPD G IPKQPD
Sbjct: 80  GHIVGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGYIPKQPD 139

Query: 121 SLTAPRGATG 131
           SLTAPRGATG
Sbjct: 140 SLTAPRGATG 149

[Close]
BLAST of HG10003656 vs. ExPASy TrEMBL
Match: A0A6N2MN31 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS378848 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 2.3e-47
Identity = 99/130 (76.15%), Postives = 107/130 (82.31%), Query Frame = 0 

Query: 1   MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRL 60
           MPGAR C +  +GARC PRS +R LHR  KG GLG   +PHRS P+ DR   +SPFHIR 
Sbjct: 606 MPGARMCGARRDGARCSPRSQRRHLHRRFKGPGLGRHRDPHRSTPRADRGP-ASPFHIRP 665

Query: 61  GHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSPIFSLGQNLPPDCGCIPKQPD 120
           G IAGPHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSPIFSLG+NLPPD GCIPKQPD
Sbjct: 666 GRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGRNLPPDWGCIPKQPD 725

Query: 121 SLTAPRGATG 131
           S TAPRGA G
Sbjct: 726 SQTAPRGAAG 734

[Close]
BLAST of HG10003656 vs. ExPASy TrEMBL
Match: A0A2Z6S693 (Uncharacterized protein OS=Rhizophagus clarus OX=94130 GN=RclHR1_00930029 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.1e-45
Identity = 92/121 (76.03%), Postives = 101/121 (83.47%), Query Frame = 0 

Query: 1   MPGARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRL 60
           +PGARRCR  P GA CQP+  +RRLHR     G G R NPHRS P+VDR+TG +PFHIR 
Sbjct: 20  VPGARRCRGTPRGACCQPQLTRRRLHRRIYNPGFGRRTNPHRSTPRVDRQTGLTPFHIRP 79

Query: 61  GHIAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSPIFSLGQNLPPDCGCIPKQPD 120
           G IA PHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSP+FSLG+NLPPD GCIPKQPD
Sbjct: 80  GRIADPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRNLPPDWGCIPKQPD 139

Query: 121 S 122
           S
Sbjct: 140 S 140

[Close]
BLAST of HG10003656 vs. ExPASy TrEMBL
Match: A0A6N2KST1 (Uncharacterized protein (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS127836 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 4.0e-44
Identity = 97/128 (75.78%), Postives = 103/128 (80.47%), Query Frame = 0 

Query: 3   GARRCRSPPEGARCQPRSGQRRLHRHNKGLGLGHRLNPHRSMPQVDRRTGSSPFHIRLGH 62
           GARR     +GARC PRS +R LHR  KG GLG   +PHRS P+ DRRTG    HIR G 
Sbjct: 796 GARR-----DGARCSPRSQRRHLHRRFKGPGLGRHRDPHRSTPRADRRTGCRR-HIRPGR 855

Query: 63  IAGPHPLPSRQFQALFDSLFKVIFIFPSRYLFAIGLSPIFSLGQNLPPDCGCIPKQPDSL 122
           IAGPHPLPSRQFQALFDSLFKV+FIFPSRYLFAIGLSPIFSLG+NLPPD GCIPKQPDS 
Sbjct: 856 IAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGRNLPPDWGCIPKQPDSQ 915

Query: 123 TAPRGATG 131
           TAPRGA G
Sbjct: 916 TAPRGAAG 917

The following BLAST results are available for this feature:
BLAST of HG10003656 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022933354.13.4e-6190.77uncharacterized protein LOC111440692 [Cucurbita moschata][more]
XP_023520622.12.2e-6090.00uncharacterized protein LOC111784033 [Cucurbita pepo subsp. pepo] >XP_023522132.... [more]
XP_023552350.12.2e-6090.00uncharacterized protein LOC111810043 [Cucurbita pepo subsp. pepo][more]
XP_022975713.11.8e-5989.23uncharacterized protein LOC111475769 [Cucurbita maxima][more]
GBC10051.14.4e-4576.03hypothetical protein RclHR1_00930029 [Rhizophagus clarus][more]
BLAST of HG10003656 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of HG10003656 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EZI81.6e-6190.77uncharacterized protein LOC111440692 OS=Cucurbita moschata OX=3662 GN=LOC1114406... [more]
A0A6J1IK288.9e-6089.23uncharacterized protein LOC111475769 OS=Cucurbita maxima OX=3661 GN=LOC111475769... [more]
A0A6N2MN312.3e-4776.15Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS378848 PE=4 SV=... [more]
A0A2Z6S6932.1e-4576.03Uncharacterized protein OS=Rhizophagus clarus OX=94130 GN=RclHR1_00930029 PE=4 S... [more]
A0A6N2KST14.0e-4475.78Uncharacterized protein (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS1278... [more]
BLAST of HG10003656 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
NoneNo IPR availablePANTHERPTHR33047:SF22SENESCENCE-ASSOCIATED PROTEINcoord: 28..130
NoneNo IPR availablePANTHERPTHR33047PROTEIN TAR1coord: 28..130

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10003656.1HG10003656.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane