HG10003596 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10003596
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionATP-dependent Clp protease
LocationChr08: 3899244 .. 3901400 (+)
RNA-Seq ExpressionHG10003596
SyntenyHG10003596
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAAAGAGAGAGTTACTGTGAATGGTAGTGTGGTTGAATGTTTAAGTCAAATCATTAAATCTGAGTGGGTATGCCATCGACAAAGGCAAAACCTCAACATAAGTTTTGTCGGATCCAAAAATCCCCAAGAAAAGAGTATTGGGGAAGAGATGCCTTCTGGTCAGCCATGGTTAAAATGTTGGGACCATGATACCAAGCTAGCTTATGCTTACCTCGTAGGTTATAATGTACCTTTTGTGCTGTTAAAGTACATAAACAAGACTTCAATCTATCACTTTTGTGACATTTGAATTTATAGCTCTTCATTGTAATTTAAAACTTTTTAAAAAAAAGAAGGAAAAAAACCATTTAATTGAGACAAGAGCTTAGATAACTGCAGGAAGTCCCGATCATAATTAGAAAAAATCTGGTTGGAAATATTCATTAAAGACATTCAGAGAACTCTAGTTTATTTTTCTAATGGGGTTTCCTCTTTTTTTTTTTTTTTTTTTCAACAAATAATTTTATATATAGGATAGAAGACAATTTCTTTGACTGCTAGAGGGGCCCATTCACTTTCTGCTGTATTTATATTTTCTTGTGGATGGGGATTACTTATTTCCAGATATAGTTTCATGAACTTCTTGCCCACCTTTTAATCTTTAAACTTGTGGGGCATGTAATCACTTTCTGGGGTTTGATTTGGCTTTTGCTTTGGAGATATCATCTCTTAAGTATTAACCGAGTTGAAAAAAAATCTGCAGATAGATACAAAAGATATTTTGTTTATATGTGGTGGAGCATTCGTAGATCTAGAAAAGACAATCTCTGATAGGTAGGTTATTCAATATTTTTTTGCTATTAATTCTCATCCCTTTTCAGTGTTCAAAGATGCTTTCTCAGTACTAAAATGGTTTGTGTTACTGATCAGACGGCAAGATTCTTCCATTGGTTTTGGAGCACCTGTTCGTGCTAACATGAGAATGGGCGGGGTAACAAGTGCCGCAGTTACATCATCGTTACTGGAATCAGTGAGAATGAAAGCCCTTTGGATTTGTTGGCATTTTTCATTAAAAAGTTCTGCATTGATTTATCATTTCAAGTTTTAAATTTATAATCAATGCATATTACTTTATTTTCGGCGTGACACTTCAATTCCCCTTTAACGAAATGATCAGAATCCCTTTAAAGTTCATCTAATTTTCTATTTGGTGCTTTCCAGGTTGAGAGTTCTGATCTTATAGCCTATGGTCTCATACCAGAGTTTATAGGGCGTTTTCCAATTCTTGTTAGTCTATTGGCCTTAACTGAGGACCAGCTTGTCCAGGTATTGATTCGTTTTTTATTTATTTTGTTGTTGTTCATCTAGACAGACACTACATCTGGAAGAAATAATTTTAGTAGAGATTCTAACTATTCTTATCAAAAAAATTTAATATATAGTCAACAATTTGTCGTCATTGCACATGTAATGAATATAAGATAGTCCTAAGCCTCCATTGCTTTTCAAATACGTATGCATGTTATGCATTCAGTTGATTCTCTTGGCATTTTCGACCTGCCATTGTTAACAGGTCCTCACTGAACCGAAGAACGCTCTTGGTAAGCAGTACAAGAAGTTGTTTGGCATGAATAAAGTGAGTATTTACTTTCTCATGCAACCGATTTTTACATTTTCCTCCCTTTCCATCTCTGCTATCATTATGGCATACAGACCCACTTAATTGAACCACCATTTCAATTTCCAGGTGAAGCTACATTACACAGAGAAAGCACTGAGAATGATTGCCCAGAAAGCAATGGCCAAGAATACAGGTGCCAGAGGCCTAAGAGCCATACTGGAAAGCATTCTTACAGAAGCCATGTATGAGGTATTTAGACTAGAAGTATCCATCTCAATCTAGCAATGAGGTCCTTGAATGTTCATTAATGACATTAGCTCATCTTTATTCTCAAATGTTTAGATTCCAGATGTTAAGACTGGAAACGAAAGAGTAGATGCCGTCGTCGTTGATGACGAGTCTGTTGGCTCGCTAAACTCGAGAGGATGCGGAGGGAAAATTCTTCGTGGGGATGGAGCGTTGGAACGCTATCTAGCTGAGACCAAGTTGAAAGAATCACAGGTACCGTTTTCATCAAATATGGCTTTCATTTTGGGAGGGCTGGGCAAATGA

mRNA sequence

ATGGGTAAAGAGAGAGTTACTGTGAATGGTAGTGTGGTTGAATGTTTAAGTCAAATCATTAAATCTGAGTGGGTATGCCATCGACAAAGGCAAAACCTCAACATAAGTTTTGTCGGATCCAAAAATCCCCAAGAAAAGAGTATTGGGGAAGAGATGCCTTCTGGTCAGCCATGGTTAAAATGTTGGGACCATGATACCAAGCTAGCTTATGCTTACCTCATAGATACAAAAGATATTTTGTTTATATGTGGTGGAGCATTCGTAGATCTAGAAAAGACAATCTCTGATAGACGGCAAGATTCTTCCATTGGTTTTGGAGCACCTGTTCGTGCTAACATGAGAATGGGCGGGGTAACAAGTGCCGCAGTTACATCATCGTTACTGGAATCAGTTGAGAGTTCTGATCTTATAGCCTATGGTCTCATACCAGAGTTTATAGGGCGTTTTCCAATTCTTGTTAGTCTATTGGCCTTAACTGAGGACCAGCTTGTCCAGGTCCTCACTGAACCGAAGAACGCTCTTGGTAAGCAGTACAAGAAGTTGTTTGGCATGAATAAAGTGAAGCTACATTACACAGAGAAAGCACTGAGAATGATTGCCCAGAAAGCAATGGCCAAGAATACAGGTGCCAGAGGCCTAAGAGCCATACTGGAAAGCATTCTTACAGAAGCCATGTATGAGATTCCAGATGTTAAGACTGGAAACGAAAGAGTAGATGCCGTCGTCGTTGATGACGAGTCTGTTGGCTCGCTAAACTCGAGAGGATGCGGAGGGAAAATTCTTCGTGGGGATGGAGCGTTGGAACGCTATCTAGCTGAGACCAAGTTGAAAGAATCACAGGTACCGTTTTCATCAAATATGGCTTTCATTTTGGGAGGGCTGGGCAAATGA

Coding sequence (CDS)

ATGGGTAAAGAGAGAGTTACTGTGAATGGTAGTGTGGTTGAATGTTTAAGTCAAATCATTAAATCTGAGTGGGTATGCCATCGACAAAGGCAAAACCTCAACATAAGTTTTGTCGGATCCAAAAATCCCCAAGAAAAGAGTATTGGGGAAGAGATGCCTTCTGGTCAGCCATGGTTAAAATGTTGGGACCATGATACCAAGCTAGCTTATGCTTACCTCATAGATACAAAAGATATTTTGTTTATATGTGGTGGAGCATTCGTAGATCTAGAAAAGACAATCTCTGATAGACGGCAAGATTCTTCCATTGGTTTTGGAGCACCTGTTCGTGCTAACATGAGAATGGGCGGGGTAACAAGTGCCGCAGTTACATCATCGTTACTGGAATCAGTTGAGAGTTCTGATCTTATAGCCTATGGTCTCATACCAGAGTTTATAGGGCGTTTTCCAATTCTTGTTAGTCTATTGGCCTTAACTGAGGACCAGCTTGTCCAGGTCCTCACTGAACCGAAGAACGCTCTTGGTAAGCAGTACAAGAAGTTGTTTGGCATGAATAAAGTGAAGCTACATTACACAGAGAAAGCACTGAGAATGATTGCCCAGAAAGCAATGGCCAAGAATACAGGTGCCAGAGGCCTAAGAGCCATACTGGAAAGCATTCTTACAGAAGCCATGTATGAGATTCCAGATGTTAAGACTGGAAACGAAAGAGTAGATGCCGTCGTCGTTGATGACGAGTCTGTTGGCTCGCTAAACTCGAGAGGATGCGGAGGGAAAATTCTTCGTGGGGATGGAGCGTTGGAACGCTATCTAGCTGAGACCAAGTTGAAAGAATCACAGGTACCGTTTTCATCAAATATGGCTTTCATTTTGGGAGGGCTGGGCAAATGA

Protein sequence

MGKERVTVNGSVVECLSQIIKSEWVCHRQRQNLNISFVGSKNPQEKSIGEEMPSGQPWLKCWDHDTKLAYAYLIDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDDESVGSLNSRGCGGKILRGDGALERYLAETKLKESQVPFSSNMAFILGGLGK
Homology
BLAST of HG10003596 vs. NCBI nr
Match: XP_038890015.1 (CLP protease regulatory subunit CLPX1, mitochondrial isoform X3 [Benincasa hispida])

HSP 1 Score: 393.3 bits (1009), Expect = 1.9e-105
Identity = 204/207 (98.55%), Postives = 207/207 (100.00%), Query Frame = 0

Query: 74  IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVES 133
           IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVT+AAVTSSLLESVES
Sbjct: 410 IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTNAAVTSSLLESVES 469

Query: 134 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 193
           SDL+AYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE
Sbjct: 470 SDLVAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 529

Query: 194 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDDESVGSLNS 253
           KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVD+ESVGSLNS
Sbjct: 530 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDEESVGSLNS 589

Query: 254 RGCGGKILRGDGALERYLAETKLKESQ 281
           RGCGGKILRGDGALERYLAETKLKESQ
Sbjct: 590 RGCGGKILRGDGALERYLAETKLKESQ 616

BLAST of HG10003596 vs. NCBI nr
Match: XP_038890013.1 (CLP protease regulatory subunit CLPX3, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 393.3 bits (1009), Expect = 1.9e-105
Identity = 204/207 (98.55%), Postives = 207/207 (100.00%), Query Frame = 0

Query: 74  IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVES 133
           IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVT+AAVTSSLLESVES
Sbjct: 476 IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTNAAVTSSLLESVES 535

Query: 134 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 193
           SDL+AYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE
Sbjct: 536 SDLVAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 595

Query: 194 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDDESVGSLNS 253
           KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVD+ESVGSLNS
Sbjct: 596 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDEESVGSLNS 655

Query: 254 RGCGGKILRGDGALERYLAETKLKESQ 281
           RGCGGKILRGDGALERYLAETKLKESQ
Sbjct: 656 RGCGGKILRGDGALERYLAETKLKESQ 682

BLAST of HG10003596 vs. NCBI nr
Match: XP_038890014.1 (CLP protease regulatory subunit CLPX1, mitochondrial isoform X2 [Benincasa hispida])

HSP 1 Score: 393.3 bits (1009), Expect = 1.9e-105
Identity = 204/207 (98.55%), Postives = 207/207 (100.00%), Query Frame = 0

Query: 74  IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVES 133
           IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVT+AAVTSSLLESVES
Sbjct: 454 IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTNAAVTSSLLESVES 513

Query: 134 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 193
           SDL+AYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE
Sbjct: 514 SDLVAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 573

Query: 194 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDDESVGSLNS 253
           KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVD+ESVGSLNS
Sbjct: 574 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDEESVGSLNS 633

Query: 254 RGCGGKILRGDGALERYLAETKLKESQ 281
           RGCGGKILRGDGALERYLAETKLKESQ
Sbjct: 634 RGCGGKILRGDGALERYLAETKLKESQ 660

BLAST of HG10003596 vs. NCBI nr
Match: XP_016902438.1 (PREDICTED: CLP protease regulatory subunit CLPX1, mitochondrial isoform X3 [Cucumis melo])

HSP 1 Score: 383.3 bits (983), Expect = 2.0e-102
Identity = 200/210 (95.24%), Postives = 204/210 (97.14%), Query Frame = 0

Query: 74  IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVES 133
           IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMR+ G TSAAVTSSLLESVES
Sbjct: 307 IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRISGATSAAVTSSLLESVES 366

Query: 134 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 193
           SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE
Sbjct: 367 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 426

Query: 194 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDDESVGSLNS 253
           KALRMIA+KA+AKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVD+ESVG LNS
Sbjct: 427 KALRMIAKKAIAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDEESVGPLNS 486

Query: 254 RGCGGKILRGDGALERYLAETKLKESQVPF 284
           RGCGGKILRGDGALERYLAE KLKESQ  F
Sbjct: 487 RGCGGKILRGDGALERYLAEIKLKESQENF 516

BLAST of HG10003596 vs. NCBI nr
Match: XP_004141515.1 (CLP protease regulatory subunit CLPX3, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 383.3 bits (983), Expect = 2.0e-102
Identity = 200/207 (96.62%), Postives = 204/207 (98.55%), Query Frame = 0

Query: 74  IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVES 133
           IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMR+GG TSAAVTSSLLESVES
Sbjct: 471 IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRIGGATSAAVTSSLLESVES 530

Query: 134 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 193
           SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE
Sbjct: 531 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 590

Query: 194 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDDESVGSLNS 253
           KALRMIA+KA+AKNTGARGLRAILESILTEAMYEIPDVKTG ERVDAVVVD+ESVG LNS
Sbjct: 591 KALRMIAKKAIAKNTGARGLRAILESILTEAMYEIPDVKTGIERVDAVVVDEESVGPLNS 650

Query: 254 RGCGGKILRGDGALERYLAETKLKESQ 281
           RGCGGKILRGDGALERYLAETKLKESQ
Sbjct: 651 RGCGGKILRGDGALERYLAETKLKESQ 677

BLAST of HG10003596 vs. ExPASy Swiss-Prot
Match: Q66GN9 (CLP protease regulatory subunit CLPX3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLPX3 PE=2 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 1.1e-87
Identity = 165/209 (78.95%), Postives = 184/209 (88.04%), Query Frame = 0

Query: 74  IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVES 133
           IDTKDILFICGGAFVDLEKTI DRRQDSSIGFGAPVRANM   GVTS A+TSSLLESVES
Sbjct: 434 IDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGAITSSLLESVES 493

Query: 134 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 193
           +DL AYGLIPEF+GRFPILVSL ALTEDQL++VL EPKNALGKQYKKLF MN VKLH+TE
Sbjct: 494 ADLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTE 553

Query: 194 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDDESVGSLNS 253
           KAL +I+++AM KNTGARGLRA+LESILTEAM+EIPD K G+ER+DAV+VD+ES  S  S
Sbjct: 554 KALEIISKQAMVKNTGARGLRALLESILTEAMFEIPDDKKGDERIDAVIVDEESTSSEAS 613

Query: 254 RGCGGKILRGDGALERYLAETKLKESQVP 283
           RGC  KILRGDGA ERYL+E K K++  P
Sbjct: 614 RGCTAKILRGDGAFERYLSENKSKDATEP 642

BLAST of HG10003596 vs. ExPASy Swiss-Prot
Match: Q9FK07 (CLP protease regulatory subunit CLPX1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLPX1 PE=2 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 3.6e-83
Identity = 156/206 (75.73%), Postives = 183/206 (88.83%), Query Frame = 0

Query: 74  IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVES 133
           IDTKDILFICGGAFVD+EKTIS+RR DSSIGFGAPVRANMR GGVT+AAV S+L+E+VES
Sbjct: 349 IDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVES 408

Query: 134 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 193
           SDLIAYGLIPEF+GRFP+LVSL ALTE+QL+QVLTEPKNALGKQYKK++ MN VKLH+TE
Sbjct: 409 SDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFTE 468

Query: 194 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDDESVGSLNS 253
            ALR+IA+KA+ KNTGARGLRA+LESIL ++MYEIPD  TG++ ++AVVVD+E+V     
Sbjct: 469 SALRLIARKAITKNTGARGLRALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAVEGEGR 528

Query: 254 RGCGGKILRGDGALERYLAETKLKES 280
           RG G KILRG GAL RYL+ET  K+S
Sbjct: 529 RGSGAKILRGKGALARYLSETNSKDS 554

BLAST of HG10003596 vs. ExPASy Swiss-Prot
Match: F4K7F6 (CLP protease regulatory subunit CLPX2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLPX2 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 4.3e-76
Identity = 143/206 (69.42%), Postives = 178/206 (86.41%), Query Frame = 0

Query: 74  IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVES 133
           +DTKDILFICGGAF+DLEKT+S+R+ D+SIGFGA VR NM   G++SAAVTSSLLES++S
Sbjct: 390 MDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSSAAVTSSLLESLQS 449

Query: 134 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 193
            DL+AYGLIPEF+GR PILVSL AL EDQLVQVLTEPK+ALGKQYKKLF MN V+L +TE
Sbjct: 450 EDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKKLFRMNNVQLQFTE 509

Query: 194 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPD-VKTGNERVDAVVVDDESVGSLN 253
            A R+IA+KAM+KNTGARGLR+ILESILTEAM+E+PD +  G++ + AV+VD+E+VGS+ 
Sbjct: 510 GATRLIARKAMSKNTGARGLRSILESILTEAMFEVPDSITEGSQSIKAVLVDEEAVGSVG 569

Query: 254 SRGCGGKILRGDGALERYLAETKLKE 279
           S GCG KIL+GD  L++++ E + KE
Sbjct: 570 SPGCGAKILKGDNVLQQFVEEAESKE 595

BLAST of HG10003596 vs. ExPASy Swiss-Prot
Match: Q11J59 (ATP-dependent Clp protease ATP-binding subunit ClpX OS=Chelativorans sp. (strain BNC1) OX=266779 GN=clpX PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.9e-39
Identity = 93/177 (52.54%), Postives = 121/177 (68.36%), Query Frame = 0

Query: 74  IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRA--NMRMGGVTSAAVTSSLLESV 133
           +DT  ILFICGGAF  LEK ISDR + +SIGFGA V +  + R G          LL  V
Sbjct: 239 VDTSSILFICGGAFAGLEKIISDRGKKTSIGFGASVSSPEDRRAG---------ELLRQV 298

Query: 134 ESSDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHY 193
           E  DL+ +GLIPEF+GR PIL +L  L E+ LVQ+LTEPKNAL KQY++LF M  V+L +
Sbjct: 299 EPEDLLKFGLIPEFVGRLPILATLEDLDEEALVQILTEPKNALVKQYQRLFEMENVELTF 358

Query: 194 TEKALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDDESV 249
            E ALR IA+KA+ + TGARGLR+I+E+IL + M+E+P +    E V  VV+ ++ V
Sbjct: 359 HENALRAIARKAIERKTGARGLRSIMEAILLDTMFELPAL----EGVQEVVISEDVV 402

BLAST of HG10003596 vs. ExPASy Swiss-Prot
Match: A1U1Q2 (ATP-dependent Clp protease ATP-binding subunit ClpX OS=Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8) OX=351348 GN=clpX PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.9e-39
Identity = 88/175 (50.29%), Postives = 120/175 (68.57%), Query Frame = 0

Query: 74  IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVES 133
           +DT +ILFICGGAF  L+K I +R + SSIGF A V++         +  T  ++  VE+
Sbjct: 241 VDTGNILFICGGAFAGLDKVIQERSERSSIGFSATVKSQ------DDSKSTGDIIREVET 300

Query: 134 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 193
            DL+ +GLIPEF+GR P++ +L  L E+ LVQ+LTEPKNAL KQY+KLF M  V+L + E
Sbjct: 301 EDLVKFGLIPEFVGRLPVVATLTELDEEALVQILTEPKNALTKQYQKLFDMEGVELDFRE 360

Query: 194 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDDESV 249
            ALR +A+KAM + TGARGLR+I+E+ L + MY+IP     +E   + VV DESV
Sbjct: 361 DALRAVARKAMERKTGARGLRSIMEATLLDTMYQIP-----SEHDVSKVVIDESV 404

BLAST of HG10003596 vs. ExPASy TrEMBL
Match: A0A5A7TCK2 (ATP-dependent Clp protease ATP-binding subunit clpX-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001600 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 9.4e-103
Identity = 200/210 (95.24%), Postives = 204/210 (97.14%), Query Frame = 0

Query: 74  IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVES 133
           IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMR+ G TSAAVTSSLLESVES
Sbjct: 471 IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRISGATSAAVTSSLLESVES 530

Query: 134 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 193
           SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE
Sbjct: 531 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 590

Query: 194 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDDESVGSLNS 253
           KALRMIA+KA+AKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVD+ESVG LNS
Sbjct: 591 KALRMIAKKAIAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDEESVGPLNS 650

Query: 254 RGCGGKILRGDGALERYLAETKLKESQVPF 284
           RGCGGKILRGDGALERYLAE KLKESQ  F
Sbjct: 651 RGCGGKILRGDGALERYLAEIKLKESQENF 680

BLAST of HG10003596 vs. ExPASy TrEMBL
Match: A0A5D3BMP6 (ATP-dependent Clp protease ATP-binding subunit clpX-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001550 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 9.4e-103
Identity = 200/210 (95.24%), Postives = 204/210 (97.14%), Query Frame = 0

Query: 74  IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVES 133
           IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMR+ G TSAAVTSSLLESVES
Sbjct: 472 IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRISGATSAAVTSSLLESVES 531

Query: 134 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 193
           SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE
Sbjct: 532 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 591

Query: 194 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDDESVGSLNS 253
           KALRMIA+KA+AKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVD+ESVG LNS
Sbjct: 592 KALRMIAKKAIAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDEESVGPLNS 651

Query: 254 RGCGGKILRGDGALERYLAETKLKESQVPF 284
           RGCGGKILRGDGALERYLAE KLKESQ  F
Sbjct: 652 RGCGGKILRGDGALERYLAEIKLKESQENF 681

BLAST of HG10003596 vs. ExPASy TrEMBL
Match: A0A0A0KSQ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G646720 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 9.4e-103
Identity = 200/207 (96.62%), Postives = 204/207 (98.55%), Query Frame = 0

Query: 74  IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVES 133
           IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMR+GG TSAAVTSSLLESVES
Sbjct: 406 IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRIGGATSAAVTSSLLESVES 465

Query: 134 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 193
           SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE
Sbjct: 466 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 525

Query: 194 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDDESVGSLNS 253
           KALRMIA+KA+AKNTGARGLRAILESILTEAMYEIPDVKTG ERVDAVVVD+ESVG LNS
Sbjct: 526 KALRMIAKKAIAKNTGARGLRAILESILTEAMYEIPDVKTGIERVDAVVVDEESVGPLNS 585

Query: 254 RGCGGKILRGDGALERYLAETKLKESQ 281
           RGCGGKILRGDGALERYLAETKLKESQ
Sbjct: 586 RGCGGKILRGDGALERYLAETKLKESQ 612

BLAST of HG10003596 vs. ExPASy TrEMBL
Match: A0A1S3CAE7 (CLP protease regulatory subunit CLPX3, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498613 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 9.4e-103
Identity = 200/210 (95.24%), Postives = 204/210 (97.14%), Query Frame = 0

Query: 74  IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVES 133
           IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMR+ G TSAAVTSSLLESVES
Sbjct: 372 IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRISGATSAAVTSSLLESVES 431

Query: 134 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 193
           SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE
Sbjct: 432 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 491

Query: 194 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDDESVGSLNS 253
           KALRMIA+KA+AKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVD+ESVG LNS
Sbjct: 492 KALRMIAKKAIAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDEESVGPLNS 551

Query: 254 RGCGGKILRGDGALERYLAETKLKESQVPF 284
           RGCGGKILRGDGALERYLAE KLKESQ  F
Sbjct: 552 RGCGGKILRGDGALERYLAEIKLKESQENF 581

BLAST of HG10003596 vs. ExPASy TrEMBL
Match: A0A1S4E2I6 (CLP protease regulatory subunit CLPX3, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498613 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 9.4e-103
Identity = 200/210 (95.24%), Postives = 204/210 (97.14%), Query Frame = 0

Query: 74  IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVES 133
           IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMR+ G TSAAVTSSLLESVES
Sbjct: 373 IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRISGATSAAVTSSLLESVES 432

Query: 134 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 193
           SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE
Sbjct: 433 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 492

Query: 194 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDDESVGSLNS 253
           KALRMIA+KA+AKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVD+ESVG LNS
Sbjct: 493 KALRMIAKKAIAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDEESVGPLNS 552

Query: 254 RGCGGKILRGDGALERYLAETKLKESQVPF 284
           RGCGGKILRGDGALERYLAE KLKESQ  F
Sbjct: 553 RGCGGKILRGDGALERYLAEIKLKESQENF 582

BLAST of HG10003596 vs. TAIR 10
Match: AT1G33360.1 (ATP-dependent Clp protease )

HSP 1 Score: 324.7 bits (831), Expect = 7.7e-89
Identity = 165/209 (78.95%), Postives = 184/209 (88.04%), Query Frame = 0

Query: 74  IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVES 133
           IDTKDILFICGGAFVDLEKTI DRRQDSSIGFGAPVRANM   GVTS A+TSSLLESVES
Sbjct: 434 IDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGAITSSLLESVES 493

Query: 134 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 193
           +DL AYGLIPEF+GRFPILVSL ALTEDQL++VL EPKNALGKQYKKLF MN VKLH+TE
Sbjct: 494 ADLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTE 553

Query: 194 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDDESVGSLNS 253
           KAL +I+++AM KNTGARGLRA+LESILTEAM+EIPD K G+ER+DAV+VD+ES  S  S
Sbjct: 554 KALEIISKQAMVKNTGARGLRALLESILTEAMFEIPDDKKGDERIDAVIVDEESTSSEAS 613

Query: 254 RGCGGKILRGDGALERYLAETKLKESQVP 283
           RGC  KILRGDGA ERYL+E K K++  P
Sbjct: 614 RGCTAKILRGDGAFERYLSENKSKDATEP 642

BLAST of HG10003596 vs. TAIR 10
Match: AT5G53350.1 (CLP protease regulatory subunit X )

HSP 1 Score: 309.7 bits (792), Expect = 2.6e-84
Identity = 156/206 (75.73%), Postives = 183/206 (88.83%), Query Frame = 0

Query: 74  IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVES 133
           IDTKDILFICGGAFVD+EKTIS+RR DSSIGFGAPVRANMR GGVT+AAV S+L+E+VES
Sbjct: 349 IDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVES 408

Query: 134 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 193
           SDLIAYGLIPEF+GRFP+LVSL ALTE+QL+QVLTEPKNALGKQYKK++ MN VKLH+TE
Sbjct: 409 SDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFTE 468

Query: 194 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDDESVGSLNS 253
            ALR+IA+KA+ KNTGARGLRA+LESIL ++MYEIPD  TG++ ++AVVVD+E+V     
Sbjct: 469 SALRLIARKAITKNTGARGLRALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAVEGEGR 528

Query: 254 RGCGGKILRGDGALERYLAETKLKES 280
           RG G KILRG GAL RYL+ET  K+S
Sbjct: 529 RGSGAKILRGKGALARYLSETNSKDS 554

BLAST of HG10003596 vs. TAIR 10
Match: AT5G49840.1 (ATP-dependent Clp protease )

HSP 1 Score: 286.2 bits (731), Expect = 3.0e-77
Identity = 143/206 (69.42%), Postives = 178/206 (86.41%), Query Frame = 0

Query: 74  IDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVES 133
           +DTKDILFICGGAF+DLEKT+S+R+ D+SIGFGA VR NM   G++SAAVTSSLLES++S
Sbjct: 390 MDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSSAAVTSSLLESLQS 449

Query: 134 SDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTE 193
            DL+AYGLIPEF+GR PILVSL AL EDQLVQVLTEPK+ALGKQYKKLF MN V+L +TE
Sbjct: 450 EDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKKLFRMNNVQLQFTE 509

Query: 194 KALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPD-VKTGNERVDAVVVDDESVGSLN 253
            A R+IA+KAM+KNTGARGLR+ILESILTEAM+E+PD +  G++ + AV+VD+E+VGS+ 
Sbjct: 510 GATRLIARKAMSKNTGARGLRSILESILTEAMFEVPDSITEGSQSIKAVLVDEEAVGSVG 569

Query: 254 SRGCGGKILRGDGALERYLAETKLKE 279
           S GCG KIL+GD  L++++ E + KE
Sbjct: 570 SPGCGAKILKGDNVLQQFVEEAESKE 595

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038890015.11.9e-10598.55CLP protease regulatory subunit CLPX1, mitochondrial isoform X3 [Benincasa hispi... [more]
XP_038890013.11.9e-10598.55CLP protease regulatory subunit CLPX3, mitochondrial isoform X1 [Benincasa hispi... [more]
XP_038890014.11.9e-10598.55CLP protease regulatory subunit CLPX1, mitochondrial isoform X2 [Benincasa hispi... [more]
XP_016902438.12.0e-10295.24PREDICTED: CLP protease regulatory subunit CLPX1, mitochondrial isoform X3 [Cucu... [more]
XP_004141515.12.0e-10296.62CLP protease regulatory subunit CLPX3, mitochondrial isoform X2 [Cucumis sativus... [more]
Match NameE-valueIdentityDescription
Q66GN91.1e-8778.95CLP protease regulatory subunit CLPX3, mitochondrial OS=Arabidopsis thaliana OX=... [more]
Q9FK073.6e-8375.73CLP protease regulatory subunit CLPX1, mitochondrial OS=Arabidopsis thaliana OX=... [more]
F4K7F64.3e-7669.42CLP protease regulatory subunit CLPX2, mitochondrial OS=Arabidopsis thaliana OX=... [more]
Q11J591.9e-3952.54ATP-dependent Clp protease ATP-binding subunit ClpX OS=Chelativorans sp. (strain... [more]
A1U1Q21.9e-3950.29ATP-dependent Clp protease ATP-binding subunit ClpX OS=Marinobacter hydrocarbono... [more]
Match NameE-valueIdentityDescription
A0A5A7TCK29.4e-10395.24ATP-dependent Clp protease ATP-binding subunit clpX-like OS=Cucumis melo var. ma... [more]
A0A5D3BMP69.4e-10395.24ATP-dependent Clp protease ATP-binding subunit clpX-like OS=Cucumis melo var. ma... [more]
A0A0A0KSQ59.4e-10396.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G646720 PE=4 SV=1[more]
A0A1S3CAE79.4e-10395.24CLP protease regulatory subunit CLPX3, mitochondrial isoform X2 OS=Cucumis melo ... [more]
A0A1S4E2I69.4e-10395.24CLP protease regulatory subunit CLPX3, mitochondrial isoform X1 OS=Cucumis melo ... [more]
Match NameE-valueIdentityDescription
AT1G33360.17.7e-8978.95ATP-dependent Clp protease [more]
AT5G53350.12.6e-8475.73CLP protease regulatory subunit X [more]
AT5G49840.13.0e-7769.42ATP-dependent Clp protease [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019489Clp ATPase, C-terminalSMARTSM01086ClpB_D2_small_2coord: 158..249
e-value: 9.6E-28
score: 108.2
IPR019489Clp ATPase, C-terminalPFAMPF10431ClpB_D2-smallcoord: 158..228
e-value: 5.9E-14
score: 51.9
IPR003959ATPase, AAA-type, corePFAMPF07724AAA_2coord: 74..151
e-value: 2.5E-7
score: 31.0
NoneNo IPR availableGENE3D1.10.8.60coord: 157..256
e-value: 1.6E-34
score: 120.1
NoneNo IPR availablePANTHERPTHR48102ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATEDcoord: 74..279
NoneNo IPR availablePANTHERPTHR48102:SF5OS01G0886600 PROTEINcoord: 74..279
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 36..156
e-value: 6.7E-28
score: 99.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 73..241

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10003596.1HG10003596.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030163 protein catabolic process
biological_process GO:0006457 protein folding
biological_process GO:0006508 proteolysis
cellular_component GO:0005759 mitochondrial matrix
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity
molecular_function GO:0008233 peptidase activity
molecular_function GO:0051082 unfolded protein binding