HG10003596 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAAAGAGAGAGTTACTGTGAATGGTAGTGTGGTTGAATGTTTAAGTCAAATCATTAAATCTGAGTGGGTATGCCATCGACAAAGGCAAAACCTCAACATAAGTTTTGTCGGATCCAAAAATCCCCAAGAAAAGAGTATTGGGGAAGAGATGCCTTCTGGTCAGCCATGGTTAAAATGTTGGGACCATGATACCAAGCTAGCTTATGCTTACCTCGTAGGTTATAATGTACCTTTTGTGCTGTTAAAGTACATAAACAAGACTTCAATCTATCACTTTTGTGACATTTGAATTTATAGCTCTTCATTGTAATTTAAAACTTTTTAAAAAAAAGAAGGAAAAAAACCATTTAATTGAGACAAGAGCTTAGATAACTGCAGGAAGTCCCGATCATAATTAGAAAAAATCTGGTTGGAAATATTCATTAAAGACATTCAGAGAACTCTAGTTTATTTTTCTAATGGGGTTTCCTCTTTTTTTTTTTTTTTTTTTCAACAAATAATTTTATATATAGGATAGAAGACAATTTCTTTGACTGCTAGAGGGGCCCATTCACTTTCTGCTGTATTTATATTTTCTTGTGGATGGGGATTACTTATTTCCAGATATAGTTTCATGAACTTCTTGCCCACCTTTTAATCTTTAAACTTGTGGGGCATGTAATCACTTTCTGGGGTTTGATTTGGCTTTTGCTTTGGAGATATCATCTCTTAAGTATTAACCGAGTTGAAAAAAAATCTGCAGATAGATACAAAAGATATTTTGTTTATATGTGGTGGAGCATTCGTAGATCTAGAAAAGACAATCTCTGATAGGTAGGTTATTCAATATTTTTTTGCTATTAATTCTCATCCCTTTTCAGTGTTCAAAGATGCTTTCTCAGTACTAAAATGGTTTGTGTTACTGATCAGACGGCAAGATTCTTCCATTGGTTTTGGAGCACCTGTTCGTGCTAACATGAGAATGGGCGGGGTAACAAGTGCCGCAGTTACATCATCGTTACTGGAATCAGTGAGAATGAAAGCCCTTTGGATTTGTTGGCATTTTTCATTAAAAAGTTCTGCATTGATTTATCATTTCAAGTTTTAAATTTATAATCAATGCATATTACTTTATTTTCGGCGTGACACTTCAATTCCCCTTTAACGAAATGATCAGAATCCCTTTAAAGTTCATCTAATTTTCTATTTGGTGCTTTCCAGGTTGAGAGTTCTGATCTTATAGCCTATGGTCTCATACCAGAGTTTATAGGGCGTTTTCCAATTCTTGTTAGTCTATTGGCCTTAACTGAGGACCAGCTTGTCCAGGTATTGATTCGTTTTTTATTTATTTTGTTGTTGTTCATCTAGACAGACACTACATCTGGAAGAAATAATTTTAGTAGAGATTCTAACTATTCTTATCAAAAAAATTTAATATATAGTCAACAATTTGTCGTCATTGCACATGTAATGAATATAAGATAGTCCTAAGCCTCCATTGCTTTTCAAATACGTATGCATGTTATGCATTCAGTTGATTCTCTTGGCATTTTCGACCTGCCATTGTTAACAGGTCCTCACTGAACCGAAGAACGCTCTTGGTAAGCAGTACAAGAAGTTGTTTGGCATGAATAAAGTGAGTATTTACTTTCTCATGCAACCGATTTTTACATTTTCCTCCCTTTCCATCTCTGCTATCATTATGGCATACAGACCCACTTAATTGAACCACCATTTCAATTTCCAGGTGAAGCTACATTACACAGAGAAAGCACTGAGAATGATTGCCCAGAAAGCAATGGCCAAGAATACAGGTGCCAGAGGCCTAAGAGCCATACTGGAAAGCATTCTTACAGAAGCCATGTATGAGGTATTTAGACTAGAAGTATCCATCTCAATCTAGCAATGAGGTCCTTGAATGTTCATTAATGACATTAGCTCATCTTTATTCTCAAATGTTTAGATTCCAGATGTTAAGACTGGAAACGAAAGAGTAGATGCCGTCGTCGTTGATGACGAGTCTGTTGGCTCGCTAAACTCGAGAGGATGCGGAGGGAAAATTCTTCGTGGGGATGGAGCGTTGGAACGCTATCTAGCTGAGACCAAGTTGAAAGAATCACAGGTACCGTTTTCATCAAATATGGCTTTCATTTTGGGAGGGCTGGGCAAATGA ATGGGTAAAGAGAGAGTTACTGTGAATGGTAGTGTGGTTGAATGTTTAAGTCAAATCATTAAATCTGAGTGGGTATGCCATCGACAAAGGCAAAACCTCAACATAAGTTTTGTCGGATCCAAAAATCCCCAAGAAAAGAGTATTGGGGAAGAGATGCCTTCTGGTCAGCCATGGTTAAAATGTTGGGACCATGATACCAAGCTAGCTTATGCTTACCTCATAGATACAAAAGATATTTTGTTTATATGTGGTGGAGCATTCGTAGATCTAGAAAAGACAATCTCTGATAGACGGCAAGATTCTTCCATTGGTTTTGGAGCACCTGTTCGTGCTAACATGAGAATGGGCGGGGTAACAAGTGCCGCAGTTACATCATCGTTACTGGAATCAGTTGAGAGTTCTGATCTTATAGCCTATGGTCTCATACCAGAGTTTATAGGGCGTTTTCCAATTCTTGTTAGTCTATTGGCCTTAACTGAGGACCAGCTTGTCCAGGTCCTCACTGAACCGAAGAACGCTCTTGGTAAGCAGTACAAGAAGTTGTTTGGCATGAATAAAGTGAAGCTACATTACACAGAGAAAGCACTGAGAATGATTGCCCAGAAAGCAATGGCCAAGAATACAGGTGCCAGAGGCCTAAGAGCCATACTGGAAAGCATTCTTACAGAAGCCATGTATGAGATTCCAGATGTTAAGACTGGAAACGAAAGAGTAGATGCCGTCGTCGTTGATGACGAGTCTGTTGGCTCGCTAAACTCGAGAGGATGCGGAGGGAAAATTCTTCGTGGGGATGGAGCGTTGGAACGCTATCTAGCTGAGACCAAGTTGAAAGAATCACAGGTACCGTTTTCATCAAATATGGCTTTCATTTTGGGAGGGCTGGGCAAATGA ATGGGTAAAGAGAGAGTTACTGTGAATGGTAGTGTGGTTGAATGTTTAAGTCAAATCATTAAATCTGAGTGGGTATGCCATCGACAAAGGCAAAACCTCAACATAAGTTTTGTCGGATCCAAAAATCCCCAAGAAAAGAGTATTGGGGAAGAGATGCCTTCTGGTCAGCCATGGTTAAAATGTTGGGACCATGATACCAAGCTAGCTTATGCTTACCTCATAGATACAAAAGATATTTTGTTTATATGTGGTGGAGCATTCGTAGATCTAGAAAAGACAATCTCTGATAGACGGCAAGATTCTTCCATTGGTTTTGGAGCACCTGTTCGTGCTAACATGAGAATGGGCGGGGTAACAAGTGCCGCAGTTACATCATCGTTACTGGAATCAGTTGAGAGTTCTGATCTTATAGCCTATGGTCTCATACCAGAGTTTATAGGGCGTTTTCCAATTCTTGTTAGTCTATTGGCCTTAACTGAGGACCAGCTTGTCCAGGTCCTCACTGAACCGAAGAACGCTCTTGGTAAGCAGTACAAGAAGTTGTTTGGCATGAATAAAGTGAAGCTACATTACACAGAGAAAGCACTGAGAATGATTGCCCAGAAAGCAATGGCCAAGAATACAGGTGCCAGAGGCCTAAGAGCCATACTGGAAAGCATTCTTACAGAAGCCATGTATGAGATTCCAGATGTTAAGACTGGAAACGAAAGAGTAGATGCCGTCGTCGTTGATGACGAGTCTGTTGGCTCGCTAAACTCGAGAGGATGCGGAGGGAAAATTCTTCGTGGGGATGGAGCGTTGGAACGCTATCTAGCTGAGACCAAGTTGAAAGAATCACAGGTACCGTTTTCATCAAATATGGCTTTCATTTTGGGAGGGCTGGGCAAATGA MGKERVTVNGSVVECLSQIIKSEWVCHRQRQNLNISFVGSKNPQEKSIGEEMPSGQPWLKCWDHDTKLAYAYLIDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRMGGVTSAAVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGMNKVKLHYTEKALRMIAQKAMAKNTGARGLRAILESILTEAMYEIPDVKTGNERVDAVVVDDESVGSLNSRGCGGKILRGDGALERYLAETKLKESQVPFSSNMAFILGGLGK Homology
BLAST of HG10003596 vs. NCBI nr
Match: XP_038890015.1 (CLP protease regulatory subunit CLPX1, mitochondrial isoform X3 [Benincasa hispida]) HSP 1 Score: 393.3 bits (1009), Expect = 1.9e-105 Identity = 204/207 (98.55%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of HG10003596 vs. NCBI nr
Match: XP_038890013.1 (CLP protease regulatory subunit CLPX3, mitochondrial isoform X1 [Benincasa hispida]) HSP 1 Score: 393.3 bits (1009), Expect = 1.9e-105 Identity = 204/207 (98.55%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of HG10003596 vs. NCBI nr
Match: XP_038890014.1 (CLP protease regulatory subunit CLPX1, mitochondrial isoform X2 [Benincasa hispida]) HSP 1 Score: 393.3 bits (1009), Expect = 1.9e-105 Identity = 204/207 (98.55%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of HG10003596 vs. NCBI nr
Match: XP_016902438.1 (PREDICTED: CLP protease regulatory subunit CLPX1, mitochondrial isoform X3 [Cucumis melo]) HSP 1 Score: 383.3 bits (983), Expect = 2.0e-102 Identity = 200/210 (95.24%), Postives = 204/210 (97.14%), Query Frame = 0
BLAST of HG10003596 vs. NCBI nr
Match: XP_004141515.1 (CLP protease regulatory subunit CLPX3, mitochondrial isoform X2 [Cucumis sativus]) HSP 1 Score: 383.3 bits (983), Expect = 2.0e-102 Identity = 200/207 (96.62%), Postives = 204/207 (98.55%), Query Frame = 0
BLAST of HG10003596 vs. ExPASy Swiss-Prot
Match: Q66GN9 (CLP protease regulatory subunit CLPX3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLPX3 PE=2 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 1.1e-87 Identity = 165/209 (78.95%), Postives = 184/209 (88.04%), Query Frame = 0
BLAST of HG10003596 vs. ExPASy Swiss-Prot
Match: Q9FK07 (CLP protease regulatory subunit CLPX1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLPX1 PE=2 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 3.6e-83 Identity = 156/206 (75.73%), Postives = 183/206 (88.83%), Query Frame = 0
BLAST of HG10003596 vs. ExPASy Swiss-Prot
Match: F4K7F6 (CLP protease regulatory subunit CLPX2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLPX2 PE=3 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 4.3e-76 Identity = 143/206 (69.42%), Postives = 178/206 (86.41%), Query Frame = 0
BLAST of HG10003596 vs. ExPASy Swiss-Prot
Match: Q11J59 (ATP-dependent Clp protease ATP-binding subunit ClpX OS=Chelativorans sp. (strain BNC1) OX=266779 GN=clpX PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.9e-39 Identity = 93/177 (52.54%), Postives = 121/177 (68.36%), Query Frame = 0
BLAST of HG10003596 vs. ExPASy Swiss-Prot
Match: A1U1Q2 (ATP-dependent Clp protease ATP-binding subunit ClpX OS=Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8) OX=351348 GN=clpX PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.9e-39 Identity = 88/175 (50.29%), Postives = 120/175 (68.57%), Query Frame = 0
BLAST of HG10003596 vs. ExPASy TrEMBL
Match: A0A5A7TCK2 (ATP-dependent Clp protease ATP-binding subunit clpX-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001600 PE=4 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 9.4e-103 Identity = 200/210 (95.24%), Postives = 204/210 (97.14%), Query Frame = 0
BLAST of HG10003596 vs. ExPASy TrEMBL
Match: A0A5D3BMP6 (ATP-dependent Clp protease ATP-binding subunit clpX-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001550 PE=4 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 9.4e-103 Identity = 200/210 (95.24%), Postives = 204/210 (97.14%), Query Frame = 0
BLAST of HG10003596 vs. ExPASy TrEMBL
Match: A0A0A0KSQ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G646720 PE=4 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 9.4e-103 Identity = 200/207 (96.62%), Postives = 204/207 (98.55%), Query Frame = 0
BLAST of HG10003596 vs. ExPASy TrEMBL
Match: A0A1S3CAE7 (CLP protease regulatory subunit CLPX3, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498613 PE=4 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 9.4e-103 Identity = 200/210 (95.24%), Postives = 204/210 (97.14%), Query Frame = 0
BLAST of HG10003596 vs. ExPASy TrEMBL
Match: A0A1S4E2I6 (CLP protease regulatory subunit CLPX3, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498613 PE=4 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 9.4e-103 Identity = 200/210 (95.24%), Postives = 204/210 (97.14%), Query Frame = 0
BLAST of HG10003596 vs. TAIR 10
Match: AT1G33360.1 (ATP-dependent Clp protease ) HSP 1 Score: 324.7 bits (831), Expect = 7.7e-89 Identity = 165/209 (78.95%), Postives = 184/209 (88.04%), Query Frame = 0
BLAST of HG10003596 vs. TAIR 10
Match: AT5G53350.1 (CLP protease regulatory subunit X ) HSP 1 Score: 309.7 bits (792), Expect = 2.6e-84 Identity = 156/206 (75.73%), Postives = 183/206 (88.83%), Query Frame = 0
BLAST of HG10003596 vs. TAIR 10
Match: AT5G49840.1 (ATP-dependent Clp protease ) HSP 1 Score: 286.2 bits (731), Expect = 3.0e-77 Identity = 143/206 (69.42%), Postives = 178/206 (86.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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