HG10003586 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10003586
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr08: 3756099 .. 3758364 (+)
RNA-Seq ExpressionHG10003586
SyntenyHG10003586
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAATTTCGTGAAAAGGAGCGAAATCACAATGGGAAGGAAGAGGAATCAAGTGAAATGGTGGAAAGGAAAAGGAATCAAGCAAAATCACATTGGGGAAAGAGACAAATCGACCGAAATCTCATAGGGGTATTATTGTCTTTCTCTTTTCAATCTATTAGTGAAAATGGGTTGGGCTTAAAAATTTTGCTATTTTTTAATATACCATAAAGATGGGCTGCAACCCTAATTTTCTTTCTTAAAAAAACTACATTTCTGCTTGGATCATATTCAAATAAATTAATTCTCTCATTATCTATTTAATTCGAATCGTATTCAAATTAAATAATTTGTTTATTTATATGGATCCATCCAAATAAATAATTAATTATTTGAATCATATTCAAATAAATTAATTATCTATATTATAAAGTTATAATTTGAAGGAAAATTTTTTAAAATAAAAAAATAAGAAACAATATTTACACAAAGTAGCAAAATTTTTAGATAGCTGTGATAGACGCTTATAGAAGTCTATCACTGATATATGCTGATAGAAGTCTATCAATGTCATCCGTATTTTTTTTTTGTTATTTTCTGTAAATAGTTTGACATTTTTTCTATCTGTGAAAATTTTCCTAATTTGAATCTCATTCAATTAAACTTTAAAACAAATAGTGTAATTAATTGTATCCAATACAATTAATATTTTTCCTTATAAATTTGAACATTTCAAATTTTTCTTCCAACATACTTGATCATTGTTGGTCTGTGGTGAGCTAGCAAGGAGACCTTATTGACCTACAGATTATAAGCTCCATTGATCCAAGATTAATTAATTAAATTAACCTTCATTCATTAGCTATAGGCCAAACTACTATAGACCCATAGTTAAACTCTTATGCACTGTTGCATAAGTTGTGTCCATGGATATGATCAGTATAAGCAAGTTGATCCTTCATGAGTTGTTCATAGTTACATCTGGGTCAAATGTCCGTTTTACCCCTAGAATTACATTTTTTCTTAAATACCACTGATTCCTCTAATAAATAATTTGTTTATGGTCCAACCATAAACTAAGTCCCTCTCGGGCCAGTGAGAGGGTAGGGCTCTTTGTTTAAGACCCGAAATCAGCACTTAAGGGAACTACTTATCTACTTACCCTATGCGTGAAGGAATGAATTCCATCTTGTGAAGTTATGTTCCTAGCTCCCCATTTAATCAAATCCCCAAAATGGTAGGCTTATTGAGTCGGCAACTCGGGCCACTCTCTCCCTTGCAAATCAAATTTCCTATGTTTAGGAAATTTGACTTTTTTATGATTTTTTTCAAGAAAAAAAATTACAATCTGTAGTATATATAAAAAGCTGAATGGGGAGAAACTTTTTAAACCCATTTTACCCTTTCATTATAACTCTTTTTAGTCTTGCTTGGGTGGCAATTTTGTCATTCACTTCATGAAGTTACACTTACGTTTAACTTTTCATCTCCTCATTTAAAAAATGGGTCATAATTTCATAAATGATATTAGTTAATGTTATATGTTATTAGGGTCATAATGTCATAGATAATATTAGTTATTCCAGAACCAAAAACCTTTCCATCTTCCACTTTATTTGGACATATATAGATTGTTAAGTTTGCAACGTGTAAGGTTAAGATGTTAAGTAATGGAATTTGATTGTGCAAGCAAATCAAATTCAACGACACATTCAAGAGAAAAAGAAGATGATGAATCTGTAGGGGTTTAAGTGGTTCAACCTCTTAGATGACCTACATCCACAATTGCAACCTAAACTCATTGCAAGCTAAGTATCATAAAACTAACTCACTCTACTCTCACATCTAATTTTACAAAGGACTTATAGGTTCAATTTAATAGAATGTTTTTACTGAACACTTTGTGAGTTTACAGATTTAATTCACTTTCTTACAATAGGGTTGCAAAAAAGAGAGAAATGAAGAAGAAAAACATAACACTTTCTGTTGCAAAGAGGTAAATAAAAAATGCAGCAAGAGATTAGCACATCAAAAGAAGAAGATGATGAGAGATCAATGAGAAATCATAATACTTTTCTTTGCAAGAGCAATAATTGTTTTTAATGATTGGTAGAGGATGAACTTTTCTTTGTCCAACAACACAACAATTGAGAGTAGCCGATCAAAGACTATGGACAAGCCGCAAGGAAAGATGAGAGATTTGAAAGAGGACAACAATAGCATGGTTGGTGGCAGCTTGAAGGCGGAAGATGTGCAAAGAAAACGTTGTGATCCAGGGTTTTGA

mRNA sequence

ATGAAGAAATTTCGTGAAAAGGAGCGAAATCACAATGGGAAGGAAGAGGAATCAAGTGAAATGGTGGAAAGGAAAAGGAATCAAGCAAAATCACATTGGGGAAAGAGACAAATCGACCGAAATCTCATAGGGAGGATGAACTTTTCTTTGTCCAACAACACAACAATTGAGAGTAGCCGATCAAAGACTATGGACAAGCCGCAAGGAAAGATGAGAGATTTGAAAGAGGACAACAATAGCATGGTTGGTGGCAGCTTGAAGGCGGAAGATGTGCAAAGAAAACGTTGTGATCCAGGGTTTTGA

Coding sequence (CDS)

ATGAAGAAATTTCGTGAAAAGGAGCGAAATCACAATGGGAAGGAAGAGGAATCAAGTGAAATGGTGGAAAGGAAAAGGAATCAAGCAAAATCACATTGGGGAAAGAGACAAATCGACCGAAATCTCATAGGGAGGATGAACTTTTCTTTGTCCAACAACACAACAATTGAGAGTAGCCGATCAAAGACTATGGACAAGCCGCAAGGAAAGATGAGAGATTTGAAAGAGGACAACAATAGCATGGTTGGTGGCAGCTTGAAGGCGGAAGATGTGCAAAGAAAACGTTGTGATCCAGGGTTTTGA

Protein sequence

MKKFREKERNHNGKEEESSEMVERKRNQAKSHWGKRQIDRNLIGRMNFSLSNNTTIESSRSKTMDKPQGKMRDLKEDNNSMVGGSLKAEDVQRKRCDPGF
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10003586.1HG10003586.1mRNA