HG10003576 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10003576
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RING-H2 finger protein ATL7
Location	Chr08: 3533833 .. 3535512 (+)
RNA-Seq Expression	HG10003576
Synteny	HG10003576

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTATGACCATTTGGATCCATCTAAAAGCTATTCAGTTGCTTCAGGGCCAGGTCCAATTTCAAGGCCTGCACCAGAACTGAAGCTCTATCAGTTTTTTGTTTTCTGTATTCCAATTCTTTTCACTTTCATTCTTCTATTCCTTTTCTATCTCCTTTATCTTCGTCGACGAAGGGCTGATTGGACTTCCATTCGAATGCGAACATCTGCTGCAGTCAATAACAATAACAACTCTACAGTATGAGCTTTACTTTGTGTTTGCTTTTCCTGTGCTTTTAAAAGTCTATAGAATTATTTTTGTGTGTTCTTTGCTTTGCTTTTAATTATTAATGATTTTGAACGTTCTATTATTCTTGTGGTTGAACAGTCTGAAGTTGGGTTGAAGAAGGAATTCAGGGAGATGCTTCCTATTATTGTATACAATGAGACATTCTTTGTCACTGACACACTGTGAGTGAATTTTTTCTTATGTTTGGTAAAAAAATATTCTATTTTAAAGGCATAGTATATGTGTTCTTGTTATTTGGAATGAACTGAAAAGATCTTGAATGAGCATCAAGTTAGGAGATACTGTACTTTATTATGTTTTGAATTCCTTCCACTCTTCAGTTATGGCTTTCTATTTTCAGGTTCTTTAGATGTTGCTGCTAGTTTTTTTTGGATTGCTAATAATATTTTAGCTGTGTTTGGTAATTATTTGAATTTTTATTTTTAGTTTTTGAAAACTAAGCCTATAAGCACCCATTTCACCTTTAAAATTATTGTTTTTTAATCTACTTTTTACTAATGTTTTCAAGAGCCAAATTTTGAGAACTAAAACAAATAGTTTTTAAAAACTTGTTTCTGTTTATTAAATTTGGCTAAGAATACGATGTAAGTTAGATGCAAATCATCGTAAGAAATGGGGAGAAAATAGACTTAATTTTCAAAAACCAAAACCAAAATGAAATGGTTACCAAATGAGAACGTTATTATTGTCGGACTGTGTAAGACTGAAAATTACTAAGGCCATCATCACGACGTTTCGTTTTCATTTTTCCGTTTTTTTACAATGGTTCAAGTAGGTTGCGACGGGTTTGAATGATGGATGGAACTTTAAATCAACTGGTTGAATTATGTATTCATTTGATTTGGATTAAGAAAAAAGAATATTTGTGTTGGTTGGCTCAAGTAGGATGAAAATAGGCTCAATTATGTATTCATTTGATATTTAGTAGTAGACCACCTTTATGATGTGAATCTTTGTGTTGGTTGGCTCTACTAAAACTATTGGTCTACTTCAAAGAAAATTAAAAATTCAAAGATTATGAAAAGTGATATATGAATTTAGAAAAAAGAAAAGGGCTGGGTGTTGATTATCTTGAAAGAGCCATCAATCCTGTTGTGTTTGTCTTTTGTTGGTTGCAGTTGTTCAGTATGTTTAGGAGAATACAAAACAGAAGATAAACTTCAGAAGATACCATCCTGTGGGCATGTATTTCACCTGGACTGCATTGATCATTGGCTATCCAACCACAACACTTGTCCACTCTGCCGTCTCTCTGTCTTCTCACCGTCGTCTCAACCACCGCATATTCAGATCGACATGGGACTCGAATCGTCAAACGAACCACAATGCGAAGAAGCACCTCCTCCACAAACTACTCAAGCTTGTCAACATACAACACCTCCAGTGTAA

mRNA sequence

ATGGCTTATGACCATTTGGATCCATCTAAAAGCTATTCAGTTGCTTCAGGGCCAGGTCCAATTTCAAGGCCTGCACCAGAACTGAAGCTCTATCAGTTTTTTGTTTTCTGTATTCCAATTCTTTTCACTTTCATTCTTCTATTCCTTTTCTATCTCCTTTATCTTCGTCGACGAAGGGCTGATTGGACTTCCATTCGAATGCGAACATCTGCTGCAGTCAATAACAATAACAACTCTACATCTGAAGTTGGGTTGAAGAAGGAATTCAGGGAGATGCTTCCTATTATTGTATACAATGAGACATTCTTTGTCACTGACACACTTTGTTCAGTATGTTTAGGAGAATACAAAACAGAAGATAAACTTCAGAAGATACCATCCTGTGGGCATGTATTTCACCTGGACTGCATTGATCATTGGCTATCCAACCACAACACTTGTCCACTCTGCCGTCTCTCTGTCTTCTCACCGTCGTCTCAACCACCGCATATTCAGATCGACATGGGACTCGAATCGTCAAACGAACCACAATGCGAAGAAGCACCTCCTCCACAAACTACTCAAGCTTGTCAACATACAACACCTCCAGTGTAA

Coding sequence (CDS)

ATGGCTTATGACCATTTGGATCCATCTAAAAGCTATTCAGTTGCTTCAGGGCCAGGTCCAATTTCAAGGCCTGCACCAGAACTGAAGCTCTATCAGTTTTTTGTTTTCTGTATTCCAATTCTTTTCACTTTCATTCTTCTATTCCTTTTCTATCTCCTTTATCTTCGTCGACGAAGGGCTGATTGGACTTCCATTCGAATGCGAACATCTGCTGCAGTCAATAACAATAACAACTCTACATCTGAAGTTGGGTTGAAGAAGGAATTCAGGGAGATGCTTCCTATTATTGTATACAATGAGACATTCTTTGTCACTGACACACTTTGTTCAGTATGTTTAGGAGAATACAAAACAGAAGATAAACTTCAGAAGATACCATCCTGTGGGCATGTATTTCACCTGGACTGCATTGATCATTGGCTATCCAACCACAACACTTGTCCACTCTGCCGTCTCTCTGTCTTCTCACCGTCGTCTCAACCACCGCATATTCAGATCGACATGGGACTCGAATCGTCAAACGAACCACAATGCGAAGAAGCACCTCCTCCACAAACTACTCAAGCTTGTCAACATACAACACCTCCAGTGTAA

Protein sequence

MAYDHLDPSKSYSVASGPGPISRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRRRADWTSIRMRTSAAVNNNNNSTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTEDKLQKIPSCGHVFHLDCIDHWLSNHNTCPLCRLSVFSPSSQPPHIQIDMGLESSNEPQCEEAPPPQTTQACQHTTPPV

Homology

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BLAST of HG10003576 vs. NCBI nr
Match: XP_038889575.1 (RING-H2 finger protein ATL7-like [Benincasa hispida])

HSP 1 Score: 387.5 bits (994), Expect = 6.9e-104
Identity = 186/197 (94.42%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 1   MAYDHLDPSKSYSVASGPGPISRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRRRA 60
           MAYDHLDPSKSYSVASGPG +SRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRRRA
Sbjct: 1   MAYDHLDPSKSYSVASGPGSVSRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRRRA 60

Query: 61  DWTSIRMRTSAAVNNNNNSTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120
           DWTSIRMRTSAAVNNNN STSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED
Sbjct: 61  DWTSIRMRTSAAVNNNNISTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120

Query: 121 KLQKIPSCGHVFHLDCIDHWLSNHNTCPLCRLSVFSPSSQPPHIQIDMGLESSNEPQCEE 180
           KLQKIPSCGHVFH+DCIDHWLSNHNTCPLCRLSV SPSSQPPH+QID+GLESSNEPQC+E
Sbjct: 121 KLQKIPSCGHVFHMDCIDHWLSNHNTCPLCRLSVLSPSSQPPHVQIDVGLESSNEPQCDE 180

Query: 181 APPPQTTQACQHTTPPV 198
           APPP + QACQHTTPPV
Sbjct: 181 APPPHSNQACQHTTPPV 197

[Close]

BLAST of HG10003576 vs. NCBI nr
Match: KAA0039350.1 (RING-H2 finger protein ATL7 [Cucumis melo var. makuwa] >TYK00533.1 RING-H2 finger protein ATL7 [Cucumis melo var. makuwa])

HSP 1 Score: 370.9 bits (951), Expect = 6.7e-99
Identity = 179/197 (90.86%), Postives = 185/197 (93.91%), Query Frame = 0


Query: 1   MAYDHLDPSKSYSVASGPGPISRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRRRA 60
           M YDHLD SKSYSVASGPG +S+PAPELKLYQF VFCIPILFTFILLFLFYLLYLRRRRA
Sbjct: 1   MTYDHLDRSKSYSVASGPGSVSKPAPELKLYQFVVFCIPILFTFILLFLFYLLYLRRRRA 60

Query: 61  DWTSIRMRTSAAVNNNNNSTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120
           DWTSIRMRTSAA  NNN STSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED
Sbjct: 61  DWTSIRMRTSAAATNNNISTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120

Query: 121 KLQKIPSCGHVFHLDCIDHWLSNHNTCPLCRLSVFSPSSQPPHIQIDMGLESSNEPQCEE 180
           KLQKIP+CGHVFH+DCIDHWL+NHNTCPLCRLSV SPSSQPPHIQIDMG ESSNEPQCEE
Sbjct: 121 KLQKIPTCGHVFHMDCIDHWLANHNTCPLCRLSVLSPSSQPPHIQIDMGHESSNEPQCEE 180

Query: 181 APPPQTTQACQHTTPPV 198
            PPP + QACQHTTPPV
Sbjct: 181 PPPPHSNQACQHTTPPV 197

[Close]

BLAST of HG10003576 vs. NCBI nr
Match: XP_008459509.1 (PREDICTED: RING-H2 finger protein ATL7 [Cucumis melo])

HSP 1 Score: 368.6 bits (945), Expect = 3.3e-98
Identity = 177/197 (89.85%), Postives = 185/197 (93.91%), Query Frame = 0


Query: 1   MAYDHLDPSKSYSVASGPGPISRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRRRA 60
           M YDHLD SKSYSVASGPG +S+PAPELKLYQF VFCIPILFTFILLFLFYLLYLRRRRA
Sbjct: 1   MTYDHLDRSKSYSVASGPGSVSKPAPELKLYQFVVFCIPILFTFILLFLFYLLYLRRRRA 60

Query: 61  DWTSIRMRTSAAVNNNNNSTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120
           DWTSIRMRTSAA  NNN STSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED
Sbjct: 61  DWTSIRMRTSAAATNNNISTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120

Query: 121 KLQKIPSCGHVFHLDCIDHWLSNHNTCPLCRLSVFSPSSQPPHIQIDMGLESSNEPQCEE 180
           KLQKIP+CGHVFH+DCIDHWL+NHNTCPLCRLS+ SPSSQPPHIQIDMG ESS+EPQCEE
Sbjct: 121 KLQKIPTCGHVFHMDCIDHWLANHNTCPLCRLSILSPSSQPPHIQIDMGHESSDEPQCEE 180

Query: 181 APPPQTTQACQHTTPPV 198
            PPP + QACQHTTPPV
Sbjct: 181 PPPPHSNQACQHTTPPV 197

[Close]

BLAST of HG10003576 vs. NCBI nr
Match: XP_004141521.1 (RING-H2 finger protein ATL58 [Cucumis sativus] >KGN52607.1 hypothetical protein Csa_008718 [Cucumis sativus])

HSP 1 Score: 365.5 bits (937), Expect = 2.8e-97
Identity = 177/197 (89.85%), Postives = 185/197 (93.91%), Query Frame = 0


Query: 1   MAYDHLDPSKSYSVASGPGPISRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRRRA 60
           MAYDHLDPSKSY+VASGPG  S+PAPELK+YQFFVFCIPILFTFILLFLFYLLYLRRRRA
Sbjct: 1   MAYDHLDPSKSYTVASGPGSASKPAPELKVYQFFVFCIPILFTFILLFLFYLLYLRRRRA 60

Query: 61  DWTSIRMRTSAAVNNNNNSTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120
           DWTSIRMRTSAA NNNN STSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED
Sbjct: 61  DWTSIRMRTSAAANNNNISTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120

Query: 121 KLQKIPSCGHVFHLDCIDHWLSNHNTCPLCRLSVFSPSSQPPHIQIDMGLESSNEPQCEE 180
           KLQKIP+CGHVFH+DCIDHWL+NHNTCPLCRLSV SPSSQPPHIQIDMG    +EPQCEE
Sbjct: 121 KLQKIPTCGHVFHMDCIDHWLANHNTCPLCRLSVLSPSSQPPHIQIDMG---HDEPQCEE 180

Query: 181 APPPQTTQACQHTTPPV 198
            PPP + QACQHTTPPV
Sbjct: 181 PPPPHSNQACQHTTPPV 194

[Close]

BLAST of HG10003576 vs. NCBI nr
Match: XP_022932489.1 (RING-H2 finger protein ATL7-like [Cucurbita moschata])

HSP 1 Score: 339.0 bits (868), Expect = 2.8e-89
Identity = 164/197 (83.25%), Postives = 176/197 (89.34%), Query Frame = 0


Query: 1   MAYDHLDPSKSYSVASGPGPISRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRRRA 60
           MAYDHLDPSK YSVASGPGP S+PA E+K+YQFFVFCIPI+ TFI+L LFYLLYLRRRRA
Sbjct: 1   MAYDHLDPSKGYSVASGPGPASKPASEMKIYQFFVFCIPIVVTFIILLLFYLLYLRRRRA 60

Query: 61  DWTSIRMRTSAAVNNNNNSTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120
           DW+SIRMRTS  VNNN+ ST+EVGLKKEFREMLPIIVYNE+FFVTDT CSVCLGEYKTED
Sbjct: 61  DWSSIRMRTSTTVNNNDISTAEVGLKKEFREMLPIIVYNESFFVTDTQCSVCLGEYKTED 120

Query: 121 KLQKIPSCGHVFHLDCIDHWLSNHNTCPLCRLSVFSPSSQPPHIQIDMGLESSNEPQCEE 180
           KLQKIPSCGHVFHL+CIDHWLSNH TCPLCR SV SP  Q PH+QIDMGLESSNE Q EE
Sbjct: 121 KLQKIPSCGHVFHLECIDHWLSNHTTCPLCRHSVLSPLPQTPHVQIDMGLESSNEQQHEE 180

Query: 181 APPPQTTQACQHTTPPV 198
           A PP + QACQHTT PV
Sbjct: 181 ATPPDSNQACQHTTSPV 197

[Close]

BLAST of HG10003576 vs. ExPASy Swiss-Prot
Match: Q9SN28 (RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 9.2e-43
Identity = 91/180 (50.56%), Postives = 125/180 (69.44%), Query Frame = 0


Query: 22  SRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRR---RADWTSIRMRTSAAVNNNNN 81
           S  + +LKLYQ F+F +PI FTFI+LF+ Y++YLRR      DW+S+ MR    V  NNN
Sbjct: 20  STESEKLKLYQAFIFSVPICFTFIVLFVLYVIYLRRNSTTNVDWSSLGMRGGTFVPTNNN 79

Query: 82  -STSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTEDKLQKIPSCGHVFHLDCI 141
            ST+E+GL K+ REMLP+++Y E+F V D+ CSVCLG+Y+ E+KLQ++PSCGH FH++CI
Sbjct: 80  LSTAELGLSKDIREMLPVVIYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECI 139

Query: 142 DHWLSNHNTCPLCRLSVF-SPSSQPPH--IQIDMGLESSNEPQCEEAPPPQT-TQACQHT 194
           D WL++H TCPLCRLS+   PS    H   +I   +E+SN  +    P  Q+ T+A  HT
Sbjct: 140 DLWLTSHTTCPLCRLSLIPKPSLDLSHQSTEIVSSIENSNGGEASTQPDSQSATEAISHT 199

[Close]

BLAST of HG10003576 vs. ExPASy Swiss-Prot
Match: Q570X5 (RING-H2 finger protein ATL58 OS=Arabidopsis thaliana OX=3702 GN=ATL58 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.5e-42
Identity = 92/184 (50.00%), Postives = 127/184 (69.02%), Query Frame = 0


Query: 1   MAYDHLDPSKSYSVASGPGPISRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRRRA 60
           M+Y + +P ++YS A+        +PELKLYQ F+F +PI FTFI+LFLFYL+YLRR  +
Sbjct: 1   MSYSNSNP-ENYSAATS-------SPELKLYQAFIFSVPICFTFIILFLFYLIYLRRSSS 60

Query: 61  DWTSIRMRTSAAVNNNNNSTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120
           D +S+ MRT+  +  N+ ST E+GL KE REMLPI+V+ E+F V D+ CSVCLG+Y+  D
Sbjct: 61  DLSSLGMRTT-FIPGNSLSTIELGLSKELREMLPIVVFKESFTVMDSQCSVCLGDYQPND 120

Query: 121 KLQKIPSCGHVFHLDCIDHWLSNHNTCPLCRLSVFSPSSQ-----PPHIQIDMGLESSNE 180
           KLQ+IP C H FH+DCID WL++H TCPLCRL++    S+     P    +    E S++
Sbjct: 121 KLQQIPVCKHTFHMDCIDLWLTSHTTCPLCRLALIPSRSRQSQDDPVPSLVSPDEEVSSQ 175

[Close]

BLAST of HG10003576 vs. ExPASy Swiss-Prot
Match: Q9SN27 (E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.1e-33
Identity = 77/167 (46.11%), Postives = 110/167 (65.87%), Query Frame = 0


Query: 34  FVFCIPILFTFILLFLFYLLYLRRRRA----DWTSIRMRTSAAVNNNNNSTSEVGLKKEF 93
           F+ C+PI    ++L +  +LY+ RR +    DW+S+         NNN ST+E+GL K+ 
Sbjct: 24  FIVCVPIC---VILIVLLVLYIMRRNSNTNVDWSSL---GGFVPTNNNLSTAELGLSKDI 83

Query: 94  REMLPIIVYNETFFVTDTLCSVCLGEYKTEDKLQKIPSCGHVFHLDCIDHWLSNHNTCPL 153
           REMLPI++Y E+F V DT CSVCLG+Y+ E+KLQ++PSCGH FH++CID WL++H TCPL
Sbjct: 84  REMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPL 143

Query: 154 CRLSVF-SPSSQPPH--IQIDMGLESSNEPQCEEAPPPQT-TQACQH 193
           CRLS+   PS    H  I+I   +E++N  +    P  Q+ T+A  H
Sbjct: 144 CRLSLIPKPSVDLSHQSIEIVSSIENTNGGEASTQPDSQSATEAIIH 184

[Close]

BLAST of HG10003576 vs. ExPASy Swiss-Prot
Match: Q84TF5 (Probable E3 ubiquitin-protein ligase RHA4A OS=Arabidopsis thaliana OX=3702 GN=RHA4A PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.1e-27
Identity = 62/141 (43.97%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 25  APELKLYQFFVFCIPILFTFILLFLFYLLYLRRRRADWTS-----IRMRTSAAVNNNNNS 84
           A +LKLYQ F+F IPILF+ IL  LFYL YL+RR +  +S     + + +S   +++  S
Sbjct: 16  AIQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPSPMILPVSSSHQTSSHLPS 75

Query: 85  TSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTEDKLQKIPSCGHVFHLDCIDH 144
              + +K E ++ L ++++NE     D+LC VCLGE++ +++L ++P C H+FHLDCI  
Sbjct: 76  VCLLDVKVELKDKLHVVLFNEELGTRDSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHL 135

Query: 145 WLSNHNTCPLCRLSVFSPSSQ 161
           WL +HNTCPLCR SV   S++
Sbjct: 136 WLYSHNTCPLCRSSVSISSTK 156

[Close]

BLAST of HG10003576 vs. ExPASy Swiss-Prot
Match: Q940Q4 (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-16
Identity = 44/111 (39.64%), Postives = 65/111 (58.56%), Query Frame = 0


Query: 84  GLKKEFREMLPIIVYNETFFVTDTL--CSVCLGEYKTEDKLQKIPSCGHVFHLDCIDHWL 143
           G+ + F + LP+  Y     + +    C+VCL E++TEDKL+ +P C H FH+DCID WL
Sbjct: 107 GVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWL 166

Query: 144 SNHNTCPLCRLSVFS--PSSQPPHIQIDMGLESSNEPQCEEAPPPQTTQAC 191
            +H+TCPLCR S+ S   S Q P     + LES+++    E    + + AC
Sbjct: 167 LSHSTCPLCRSSLLSDLSSHQDPRSSFLLVLESASDHSSREIGGDRDSAAC 217

[Close]

BLAST of HG10003576 vs. ExPASy TrEMBL
Match: A0A5A7T7X7 (RING-H2 finger protein ATL7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001430 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 3.2e-99
Identity = 179/197 (90.86%), Postives = 185/197 (93.91%), Query Frame = 0


Query: 1   MAYDHLDPSKSYSVASGPGPISRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRRRA 60
           M YDHLD SKSYSVASGPG +S+PAPELKLYQF VFCIPILFTFILLFLFYLLYLRRRRA
Sbjct: 1   MTYDHLDRSKSYSVASGPGSVSKPAPELKLYQFVVFCIPILFTFILLFLFYLLYLRRRRA 60

Query: 61  DWTSIRMRTSAAVNNNNNSTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120
           DWTSIRMRTSAA  NNN STSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED
Sbjct: 61  DWTSIRMRTSAAATNNNISTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120

Query: 121 KLQKIPSCGHVFHLDCIDHWLSNHNTCPLCRLSVFSPSSQPPHIQIDMGLESSNEPQCEE 180
           KLQKIP+CGHVFH+DCIDHWL+NHNTCPLCRLSV SPSSQPPHIQIDMG ESSNEPQCEE
Sbjct: 121 KLQKIPTCGHVFHMDCIDHWLANHNTCPLCRLSVLSPSSQPPHIQIDMGHESSNEPQCEE 180

Query: 181 APPPQTTQACQHTTPPV 198
            PPP + QACQHTTPPV
Sbjct: 181 PPPPHSNQACQHTTPPV 197

[Close]

BLAST of HG10003576 vs. ExPASy TrEMBL
Match: A0A1S3C9U6 (RING-H2 finger protein ATL7 OS=Cucumis melo OX=3656 GN=LOC103498626 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.6e-98
Identity = 177/197 (89.85%), Postives = 185/197 (93.91%), Query Frame = 0


Query: 1   MAYDHLDPSKSYSVASGPGPISRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRRRA 60
           M YDHLD SKSYSVASGPG +S+PAPELKLYQF VFCIPILFTFILLFLFYLLYLRRRRA
Sbjct: 1   MTYDHLDRSKSYSVASGPGSVSKPAPELKLYQFVVFCIPILFTFILLFLFYLLYLRRRRA 60

Query: 61  DWTSIRMRTSAAVNNNNNSTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120
           DWTSIRMRTSAA  NNN STSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED
Sbjct: 61  DWTSIRMRTSAAATNNNISTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120

Query: 121 KLQKIPSCGHVFHLDCIDHWLSNHNTCPLCRLSVFSPSSQPPHIQIDMGLESSNEPQCEE 180
           KLQKIP+CGHVFH+DCIDHWL+NHNTCPLCRLS+ SPSSQPPHIQIDMG ESS+EPQCEE
Sbjct: 121 KLQKIPTCGHVFHMDCIDHWLANHNTCPLCRLSILSPSSQPPHIQIDMGHESSDEPQCEE 180

Query: 181 APPPQTTQACQHTTPPV 198
            PPP + QACQHTTPPV
Sbjct: 181 PPPPHSNQACQHTTPPV 197

[Close]

BLAST of HG10003576 vs. ExPASy TrEMBL
Match: A0A0A0KVZ9 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G647300 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.4e-97
Identity = 177/197 (89.85%), Postives = 185/197 (93.91%), Query Frame = 0


Query: 1   MAYDHLDPSKSYSVASGPGPISRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRRRA 60
           MAYDHLDPSKSY+VASGPG  S+PAPELK+YQFFVFCIPILFTFILLFLFYLLYLRRRRA
Sbjct: 1   MAYDHLDPSKSYTVASGPGSASKPAPELKVYQFFVFCIPILFTFILLFLFYLLYLRRRRA 60

Query: 61  DWTSIRMRTSAAVNNNNNSTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120
           DWTSIRMRTSAA NNNN STSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED
Sbjct: 61  DWTSIRMRTSAAANNNNISTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120

Query: 121 KLQKIPSCGHVFHLDCIDHWLSNHNTCPLCRLSVFSPSSQPPHIQIDMGLESSNEPQCEE 180
           KLQKIP+CGHVFH+DCIDHWL+NHNTCPLCRLSV SPSSQPPHIQIDMG    +EPQCEE
Sbjct: 121 KLQKIPTCGHVFHMDCIDHWLANHNTCPLCRLSVLSPSSQPPHIQIDMG---HDEPQCEE 180

Query: 181 APPPQTTQACQHTTPPV 198
            PPP + QACQHTTPPV
Sbjct: 181 PPPPHSNQACQHTTPPV 194

[Close]

BLAST of HG10003576 vs. ExPASy TrEMBL
Match: A0A6J1EX46 (RING-H2 finger protein ATL7-like OS=Cucurbita moschata OX=3662 GN=LOC111438892 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.4e-89
Identity = 164/197 (83.25%), Postives = 176/197 (89.34%), Query Frame = 0


Query: 1   MAYDHLDPSKSYSVASGPGPISRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRRRA 60
           MAYDHLDPSK YSVASGPGP S+PA E+K+YQFFVFCIPI+ TFI+L LFYLLYLRRRRA
Sbjct: 1   MAYDHLDPSKGYSVASGPGPASKPASEMKIYQFFVFCIPIVVTFIILLLFYLLYLRRRRA 60

Query: 61  DWTSIRMRTSAAVNNNNNSTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120
           DW+SIRMRTS  VNNN+ ST+EVGLKKEFREMLPIIVYNE+FFVTDT CSVCLGEYKTED
Sbjct: 61  DWSSIRMRTSTTVNNNDISTAEVGLKKEFREMLPIIVYNESFFVTDTQCSVCLGEYKTED 120

Query: 121 KLQKIPSCGHVFHLDCIDHWLSNHNTCPLCRLSVFSPSSQPPHIQIDMGLESSNEPQCEE 180
           KLQKIPSCGHVFHL+CIDHWLSNH TCPLCR SV SP  Q PH+QIDMGLESSNE Q EE
Sbjct: 121 KLQKIPSCGHVFHLECIDHWLSNHTTCPLCRHSVLSPLPQTPHVQIDMGLESSNEQQHEE 180

Query: 181 APPPQTTQACQHTTPPV 198
           A PP + QACQHTT PV
Sbjct: 181 ATPPDSNQACQHTTSPV 197

[Close]

BLAST of HG10003576 vs. ExPASy TrEMBL
Match: A0A6J1I7H2 (RING-H2 finger protein ATL7-like OS=Cucurbita maxima OX=3661 GN=LOC111471970 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.3e-89
Identity = 164/197 (83.25%), Postives = 176/197 (89.34%), Query Frame = 0


Query: 1   MAYDHLDPSKSYSVASGPGPISRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRRRA 60
           MAYDHLDPSK YSVASGPGP S+PA E+K+YQFFVFCIPI+ TFI+L LFYLLYLRRRRA
Sbjct: 1   MAYDHLDPSKGYSVASGPGPASKPASEMKIYQFFVFCIPIVVTFIILLLFYLLYLRRRRA 60

Query: 61  DWTSIRMRTSAAVNNNNNSTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120
           DW+SIRMRTS AVNNN+ ST+EVGLKKEFREMLPIIVYNE+FFVTDT CSVCLGEYKTED
Sbjct: 61  DWSSIRMRTSTAVNNNDISTAEVGLKKEFREMLPIIVYNESFFVTDTQCSVCLGEYKTED 120

Query: 121 KLQKIPSCGHVFHLDCIDHWLSNHNTCPLCRLSVFSPSSQPPHIQIDMGLESSNEPQCEE 180
           KLQKIPSCGHVFHL+CIDHWLSNH TCPLCR SV SP  Q PH+QIDMGLES NE Q EE
Sbjct: 121 KLQKIPSCGHVFHLECIDHWLSNHTTCPLCRHSVLSPLPQTPHVQIDMGLESLNEQQHEE 180

Query: 181 APPPQTTQACQHTTPPV 198
           A PP + QACQHTT PV
Sbjct: 181 ATPPDSNQACQHTTSPV 197

[Close]

BLAST of HG10003576 vs. TAIR 10
Match: AT4G10150.1 (RING/U-box superfamily protein )

HSP 1 Score: 174.9 bits (442), Expect = 6.5e-44
Identity = 91/180 (50.56%), Postives = 125/180 (69.44%), Query Frame = 0


Query: 22  SRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRR---RADWTSIRMRTSAAVNNNNN 81
           S  + +LKLYQ F+F +PI FTFI+LF+ Y++YLRR      DW+S+ MR    V  NNN
Sbjct: 20  STESEKLKLYQAFIFSVPICFTFIVLFVLYVIYLRRNSTTNVDWSSLGMRGGTFVPTNNN 79

Query: 82  -STSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTEDKLQKIPSCGHVFHLDCI 141
            ST+E+GL K+ REMLP+++Y E+F V D+ CSVCLG+Y+ E+KLQ++PSCGH FH++CI
Sbjct: 80  LSTAELGLSKDIREMLPVVIYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECI 139

Query: 142 DHWLSNHNTCPLCRLSVF-SPSSQPPH--IQIDMGLESSNEPQCEEAPPPQT-TQACQHT 194
           D WL++H TCPLCRLS+   PS    H   +I   +E+SN  +    P  Q+ T+A  HT
Sbjct: 140 DLWLTSHTTCPLCRLSLIPKPSLDLSHQSTEIVSSIENSNGGEASTQPDSQSATEAISHT 199

[Close]

BLAST of HG10003576 vs. TAIR 10
Match: AT1G33480.1 (RING/U-box superfamily protein )

HSP 1 Score: 172.9 bits (437), Expect = 2.5e-43
Identity = 92/184 (50.00%), Postives = 127/184 (69.02%), Query Frame = 0


Query: 1   MAYDHLDPSKSYSVASGPGPISRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRRRA 60
           M+Y + +P ++YS A+        +PELKLYQ F+F +PI FTFI+LFLFYL+YLRR  +
Sbjct: 1   MSYSNSNP-ENYSAATS-------SPELKLYQAFIFSVPICFTFIILFLFYLIYLRRSSS 60

Query: 61  DWTSIRMRTSAAVNNNNNSTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTED 120
           D +S+ MRT+  +  N+ ST E+GL KE REMLPI+V+ E+F V D+ CSVCLG+Y+  D
Sbjct: 61  DLSSLGMRTT-FIPGNSLSTIELGLSKELREMLPIVVFKESFTVMDSQCSVCLGDYQPND 120

Query: 121 KLQKIPSCGHVFHLDCIDHWLSNHNTCPLCRLSVFSPSSQ-----PPHIQIDMGLESSNE 180
           KLQ+IP C H FH+DCID WL++H TCPLCRL++    S+     P    +    E S++
Sbjct: 121 KLQQIPVCKHTFHMDCIDLWLTSHTTCPLCRLALIPSRSRQSQDDPVPSLVSPDEEVSSQ 175

[Close]

BLAST of HG10003576 vs. TAIR 10
Match: AT4G10160.1 (RING/U-box superfamily protein )

HSP 1 Score: 142.5 bits (358), Expect = 3.6e-34
Identity = 77/167 (46.11%), Postives = 110/167 (65.87%), Query Frame = 0


Query: 34  FVFCIPILFTFILLFLFYLLYLRRRRA----DWTSIRMRTSAAVNNNNNSTSEVGLKKEF 93
           F+ C+PI    ++L +  +LY+ RR +    DW+S+         NNN ST+E+GL K+ 
Sbjct: 24  FIVCVPIC---VILIVLLVLYIMRRNSNTNVDWSSL---GGFVPTNNNLSTAELGLSKDI 83

Query: 94  REMLPIIVYNETFFVTDTLCSVCLGEYKTEDKLQKIPSCGHVFHLDCIDHWLSNHNTCPL 153
           REMLPI++Y E+F V DT CSVCLG+Y+ E+KLQ++PSCGH FH++CID WL++H TCPL
Sbjct: 84  REMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPL 143

Query: 154 CRLSVF-SPSSQPPH--IQIDMGLESSNEPQCEEAPPPQT-TQACQH 193
           CRLS+   PS    H  I+I   +E++N  +    P  Q+ T+A  H
Sbjct: 144 CRLSLIPKPSVDLSHQSIEIVSSIENTNGGEASTQPDSQSATEAIIH 184

[Close]

BLAST of HG10003576 vs. TAIR 10
Match: AT4G24015.1 (RING/U-box superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 5.0e-28
Identity = 62/141 (43.97%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 25  APELKLYQFFVFCIPILFTFILLFLFYLLYLRRRRADWTS-----IRMRTSAAVNNNNNS 84
           A +LKLYQ F+F IPILF+ IL  LFYL YL+RR +  +S     + + +S   +++  S
Sbjct: 16  AIQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPSPMILPVSSSHQTSSHLPS 75

Query: 85  TSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTEDKLQKIPSCGHVFHLDCIDH 144
              + +K E ++ L ++++NE     D+LC VCLGE++ +++L ++P C H+FHLDCI  
Sbjct: 76  VCLLDVKVELKDKLHVVLFNEELGTRDSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHL 135

Query: 145 WLSNHNTCPLCRLSVFSPSSQ 161
           WL +HNTCPLCR SV   S++
Sbjct: 136 WLYSHNTCPLCRSSVSISSTK 156

[Close]

BLAST of HG10003576 vs. TAIR 10
Match: AT4G30400.1 (RING/U-box superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-17
Identity = 44/111 (39.64%), Postives = 65/111 (58.56%), Query Frame = 0


Query: 84  GLKKEFREMLPIIVYNETFFVTDTL--CSVCLGEYKTEDKLQKIPSCGHVFHLDCIDHWL 143
           G+ + F + LP+  Y     + +    C+VCL E++TEDKL+ +P C H FH+DCID WL
Sbjct: 107 GVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWL 166

Query: 144 SNHNTCPLCRLSVFS--PSSQPPHIQIDMGLESSNEPQCEEAPPPQTTQAC 191
            +H+TCPLCR S+ S   S Q P     + LES+++    E    + + AC
Sbjct: 167 LSHSTCPLCRSSLLSDLSSHQDPRSSFLLVLESASDHSSREIGGDRDSAAC 217

The following BLAST results are available for this feature:

BLAST of HG10003576 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889575.1	6.9e-104	94.42	RING-H2 finger protein ATL7-like [Benincasa hispida]	[more]
KAA0039350.1	6.7e-99	90.86	RING-H2 finger protein ATL7 [Cucumis melo var. makuwa] >TYK00533.1 RING-H2 finge...	[more]
XP_008459509.1	3.3e-98	89.85	PREDICTED: RING-H2 finger protein ATL7 [Cucumis melo]	[more]
XP_004141521.1	2.8e-97	89.85	RING-H2 finger protein ATL58 [Cucumis sativus] >KGN52607.1 hypothetical protein ...	[more]
XP_022932489.1	2.8e-89	83.25	RING-H2 finger protein ATL7-like [Cucurbita moschata]	[more]

BLAST of HG10003576 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN28	9.2e-43	50.56	RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1	[more]
Q570X5	3.5e-42	50.00	RING-H2 finger protein ATL58 OS=Arabidopsis thaliana OX=3702 GN=ATL58 PE=2 SV=1	[more]
Q9SN27	5.1e-33	46.11	E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 ...	[more]
Q84TF5	7.1e-27	43.97	Probable E3 ubiquitin-protein ligase RHA4A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q940Q4	1.9e-16	39.64	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2	[more]

BLAST of HG10003576 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T7X7	3.2e-99	90.86	RING-H2 finger protein ATL7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3C9U6	1.6e-98	89.85	RING-H2 finger protein ATL7 OS=Cucumis melo OX=3656 GN=LOC103498626 PE=4 SV=1	[more]
A0A0A0KVZ9	1.4e-97	89.85	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G647300 P...	[more]
A0A6J1EX46	1.4e-89	83.25	RING-H2 finger protein ATL7-like OS=Cucurbita moschata OX=3662 GN=LOC111438892 P...	[more]
A0A6J1I7H2	2.3e-89	83.25	RING-H2 finger protein ATL7-like OS=Cucurbita maxima OX=3661 GN=LOC111471970 PE=...	[more]

BLAST of HG10003576 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10150.1	6.5e-44	50.56	RING/U-box superfamily protein	[more]
AT1G33480.1	2.5e-43	50.00	RING/U-box superfamily protein	[more]
AT4G10160.1	3.6e-34	46.11	RING/U-box superfamily protein	[more]
AT4G24015.1	5.0e-28	43.97	RING/U-box superfamily protein	[more]
AT4G30400.1	1.4e-17	39.64	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 109..150 e-value: 2.7E-6 score: 36.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 109..151 e-value: 2.2E-14 score: 53.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 109..151 score: 13.094151
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 70..156 e-value: 4.3E-20 score: 73.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..197
None	No IPR available	PANTHER	PTHR22765	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	coord: 22..159
None	No IPR available	PANTHER	PTHR22765:SF275	RING-H2 FINGER PROTEIN ATL7-LIKE	coord: 22..159
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 93..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10003576.1	HG10003576.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0061630	ubiquitin protein ligase activity