HG10003560 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10003560
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	WD_REPEATS_REGION domain-containing protein
Location	Chr08: 3278221 .. 3286922 (+)
RNA-Seq Expression	HG10003560
Synteny	HG10003560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGAAGAAGAAAATCTCGGCCCCTCCTAAAGGCGCAAAGAAGGGGAAGAATTTTCCACTCAGTAAGGACCCTTTCTTCAGTTCTGAATCAAGGAAACGAAGGAAGATTGTTGATGATGAGATTGAGAGCGGTGAGTCAGACGAGGATAATGCGTTAGTGGGCGTTGAGGATGAGGAGTTTGAGGAAGAAACTGTTGACGAGAAAAGGAAGAGAGTAGCAATCGAGTACTTGGAGAAAATTCGGGAAATTGCGAAAAGAGAAAAGGAGAGGGAGGATGAAGAGAAGGATGAGGATGAGAGTGGTGACGAAGGCGAAAAAGATTCACTTGTTGCACAAATTCTTCAGCAAGAGCAACTCGAAGATAGTGGAAGGCTTCGGAGAGAAATTGCATCAAGGTGTTGTTTTCTATTGGTTTAATTTTTTTTTGGAATTTTTTATTTGTATTTTTGCTGATTTACATTGTTTATATTCCCCTTTTTTTTCCAAATTCATAGCACTTCACCTCTCTCCCTCACTTACACACGCTTACACAATTTTTTTTTTCTCTCATGTAGTTTAGGTAATTCTTTTTTGAAATGGAAACAATACTTTTCATTGATATAATGAAAAGATTCTAGTGCTCCAAAATACAAGATACCAAGAACAAAAAAAGTAACGAAGATACATATCAAGTAATACAAAGGCATAGAAACATAAATTAAGCTGAATTCAGTATTTTAAAAAGCCCTTTCGGGCGCGTGCCTAGGCTCAAGGCGCAGGTCTGGTGCGCGCCTTTTGTGAAGCCCCAAGGCTCAAAGCCTTGAGCCTTGGGGCTTTTTCATTGTTTTAAAAAAATTGTAATAATTAAGGGTTTTCCTTCTTTATTAACTAAACGAATCAAGTTTACTAAGTCTAAATACAAAATTTCTTGTGTTTAGGGTTTTTTTTCTTCCATATTTCCACTTCAACTATGCTTTCTCTTTTTAATGTAATATTTTTATATATAGTGCGGCTCACAAAAAAAAAAAAGCCAGTGTCTTTTTGTATGCCTTGCGCCTAGGCTCCAGAGGGCCATTGCGCTTTAGTGGGTTTTGAGCATTTAAAACACTGGCTGAATTAATGAAAGCATTCCAGTTCAAACAAATGTCTTGAATGGAATAATTGACAAAAGTTTTAGATTGAGAACACCATCATGAAGGAAGAAGACATGTTGAACCCAACTAATCTGTCCAATCAAGCAGTTTGTCATGGAAAACCCCTGATTACGTTCGAATCAAATCTCAGATAGACGGATGTTAAGCTGAAAACCATCTGCTTATATGATTCTTTTTTTCTTTTTTCTCAATCGAACTCCATGTTGTTCTCTTGATTACAACAACACGTTTTTGTTTTAATAAGTTCATATAATTTTTTAAGTAACTTTCTTTAAGAACCAGGAAATATGTCCAAATAACAGTGGGATGTCAGGCACATTCTTGTGCTATTTGTTCAAGAAGAAAGGTTGAGGTGTACTTGTTATACTCATTATAGGTGGCTAATGTTTACTTGTGTGTTTGCTTCACTGTAAGTTTATAAAGAATTTTGGAGAGCATGTTCCTATGATATGCTTGTTTCTTAAACCCACTGTATGTGAGGGAAAAAAAAGGAGAGGCAAAGGAAAAATGTGAAAAACAACTTAAAAAAATTTATGACGGGTGATGGTGGTGTTAAATTATTAATGATTATACACCTTTCAGGGTTCAGAAGCCAGTAGCTAGAGATGAATTTCAATTCTTGATTAAGCACAGACAATCTGTTACAGCTGTGGCTCTATCTGAGGATGATTTGAAGGGGTTTTCATCGTCAAAGGATGGTACCATCTTACACTGGGATGTAGATAGTGGTAAAGGGGAAAAATATCAATGGCCTAGTGATGAAGTATTGAGATTGCATGGGGCTAAGGATCCCCAAGGTCGGGCGACAAGGCATAGTAAAGTCACTTTATCATTAGCTGTTAGTTCTGATGGTCGATATTTGGCAAGTGGAGGCTTAGACCGCCATGTGCATATATGGGATACTCGTACAAGAGAGCATATTCAGGTAATTGCTATTTATTGCTATAGCTTATTGCTTATTGTTACATTTCATGGCATGGTTGAAAACTCTTGAGATTAAATCTAAACCTAAAATAATTTGGGTTGGGTTAGTGTGGAATAAATATATGAGCCTTTTGAAATTATCCTTCTTTTGTTGTTGTATTCAATTGGGGATTTATTTTAGTTTTTTCTAATTTTAAATTTAACAGCCATTTTTATTGATATAAAGAAAAGAGATAGATGAAAAGCCCACATAAGCCAAAGAAGCTGCAAAAAGATCCTCCAAATGATCTAATAGAGGATATGTTTTAGTTGAGAAGAATACTGAGAAATTGTGGACAATGTTATCCCAAATTCTGTGTATCCCTTCTTAATTACTTTGATTAGGAAGCTTCCCTCTTCCACCTTTATGAAACCTACCCAAAAGAAAAATGAAGCGGAAAGCTTGACAAAAAATAAAGTATTATAGCTGTCGAAAGCTTTTCTCATTCATTTTATTGTGGCTTCTTACAGGCATTTCCTGGTCATAGAGGACCTGTTTCGTGTTTGACTTTCAGGCAAGGGACTTCAGAACTTTTTTCTGGTTCATATGATCGAACTGTCAAGATATGGAATGTGGACGACAGAGCTTATATAAATACATTGTTTGGTCACCAAAGCGAAGTATTAACTATTGATTGCCTACGTAAAGAAAGATTACTTACTGTTGGACGTGATCGGAGTATGCAATTATGGAAGGTAGACTCCGTTTTTGAGTACTTGCAGTTTTTAGCAATTCTCTCATTGGACTTACCGCATTTCCCTAATTTAAATTTGTGCAGCATGCTTGTGTTTTCATATACCTGCAATAGTCTTATTTTCCTTTTATTATTTTGACTAATTAATCCTTTTGATGCTTGAAACAGGTTCCAGAGGAGTCTCGTTTAGTATTTCGTGCTCCTGCATCATCCTTAGAATGTTGCTGTTTTATAAGCAATGATGAATTCTTATCTGGATCAGATGACGGCAGTATTGAGCTGTGGACTGCATTAAAAAAGAAGCCTGTTTTTATTGCACAAAATGCTCATCCTTCTTCATCATCTTCCATGAATTTGGAACTAAAGGAAAATGGTGCCGTCCCCAATGGTTGTATGGGTATGAGTTTCTTCAAACATTTTTTTCTCTTCAATCATTCTGCAAATTGTCACTGCATTGGAAATGCTCATTGGTGCTTATTTCTAAGCTTTAATGTTGCCACTAATGCACAAATCAATTCATAGTTGTCACTTGGTCAGTTGGTCTTTCTGTGTTTCCTTACAGGAATGGCTAGTTGTTGGTTTTATCTCTTCTAAATTTTTTCTAATTGTTCACTTTTCCACTAATAAAGAAATTAAAACGGTTGATTTAAGTAAAAAAGAAAGCAATTAATAGCTTTTCTTTTCTATCGATATGATTTTGTATAGCTGGAGTCCCTCCTTGTAGAGAGATTTCCTTTTTGTGGGCTTGATTTTTGTATGCCCGTGTATTCTTTCATTTTTTCTCAATGAAAGCATTTGTTCTTATAAAAAAAAAAAGAAAAAAAGAAAAACAAACAAACAAAAAAATAGCTTTTTCTTTGTGCCAATTATTAGTCAATATATTGTTAAATCGTGATTTTTTTTTTTCTTTGCAGGAAATGGGGACAGTTTGTCAGCATACTCTTGGGTAAGTTCAGTCTCAGTATGTAGAAATAGTGACCTTGCTGCATCGGGTGCTGGCAACGGTTCTGTTCGTTTATGGGCTCTCACAAGTGATAAGAAAGATGTGAAACCATTATATGACCTCCCTCTGGTATGCAAGATCCCCATTTATTTTACATTACTAGCTGTTCAATTTTACCTCTTGTTATTGAACTGACTTGAATGTGGCTTATATTGTGCATTCTTTTGTATATCATTGCTTGAATTTGTGCCCTCGCATATCTCCACCTCAACAAGAGCTTTTGGCACCTGCTGAGTTAGGCTTCCTCTTGATATAACCCTATTTCTACTTTCCATATCTTTTGCTTTTGGAAGTACTCAAATAGAAAATTTAAGGGCTTTAAGGACTTCTTCCATACCTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTAGTTTAGAGACAAGAAACATATGGATATGCGTTTGATGACCTTAAATCTTGAAGTTGTGACATTTTTAAAATTCTCTTAGAAAATAAACACGGAAAAATTTGCTTTTGGTGGCACAGGCAATTGTACCTCTTGCATTCTTTTACAGTACTAATTTCCCTCTCTTTTCTAAGGAAAACTTTATTTGTATAGTATACGTACGTACGTACATATATGTATATAGATACATACATAGATACATACATACATATGTGTGTATAGATATATGTATGTATCTATACACACATACATTTGTGTGTATACATACATATATACATATATGTGTGTGTATATACATACATACATACATATGTATATATATATATGCTGTACACATATTGGAATGAGTTCTATTTCTTGTTTTTCTTATCCAAAAGTATTTTCGGACGTCCATTATACTAAATGCATGTTTGGGAGTGATTTTGAAATGGTTAAAATCACTTTTGTCATGTTTAAATCACTCCGAAAGACACCATTAATCACTTAAAATCAATTCAATGTCCAATTATACACTTTTAAAAGTATCTTTCATACTGTTAAAATTGATTTTGAAAGCTTCTCTAAAAAAAATTGATTTTGAAAACATTTTAGAATCATTTCCAAACATGCTATAAAGCTATGTGCTCCTCACCTATTGTGCTGTTTGACAAGATCAATGTCTGAGTTACTTTTTTTCAAGAAAAAATAAATATTGTTGCTATTATTTCTTTTGGAGTTTCTTAGACATCAATTGTGCTTAAGATGATGTAGTTTAGTGTATTGCTTACATATGGCTAAATTTTTTATTTCAGGTTGGGTTTGTGAACTCCTTGACCTTTGCCAAATCTGGAAGGTTTGTGGTGGCTGGAGTTGGGCAGGTAATCGTGACACAAATTGAACTTTTATGCATGTTTAATTATTTTTTGTGGTAGAAGTTTGAAGTAGAGGACTACTACTACTGGTTTCTATATGTTTAACATTTATATATATGTATATAAAACAATCTAGAAGCTTCTGTTTTTCTAAAGGAACAAATTTTCACTAATCTAACTTCTAGAAAGTCTCTCAACTATGATCAGATTAATTACTCTCTATCTTCTTTTTTTGGGATAAGAAACAATTCCATTGGTGGTGTGAAATTACAAAAGAGAGATGACCCCAATAGGGAAATACCTCTCTAATCAGAAAGGAGGGAAGTAAAGCTATAGACTATAGTTGTGAAAAATGGGAGATTTATACCAAGTCACAGCCATATTAACTAAAGTATCAAGAAATCTGTTATAGGTGAATTCCTTATACTTGATTTTTTTCTTGCGAAATGTCCCAGCAGTAGGCTCGAACGAGTTTTCCAATAGGAGCTTTCTTTCCTTTTTTAAGGGGTGACCACCCAAAGTGTGTGGAAGAAACATCTTTGGGGCTTTGGGTAGGGCGTTTTGCCAACTTATAGGACATTAGTAGGTGGCACCAAAATTTCCTTGTACAATCACAAGTAATGAGGGAGATGATTCTGTGATTCTAGGTCTTGTTTGCAGATGATGCACCATTAAGGAGATAAGTTCCAGTGGGGTAGCTTTCTTTGAGCTTGCCATTTGTATTGATGGCCTAGTGTGATAGTTCCTAGAGGACCTGAGTTTTCCTAGGGAGTGTTCTTTCCAAATCCATTAAAAAAACTGTGGAGGAGGCTCTTTTTTGCGCTGGTGGAAAAAGATGCTCCAATTTCTAGATGCATTTGTCCTATCTTTGGGATAAAATGGTAGGTCCGAGGCTATTCAATGCACACTCTTCAATCTTCTCATCTCTGATATTTCTTCAAAGCGTAAGCTTCCATGAGTTTAAATCTGCAAGCCACATGTCCTTTACGGCCCCATCTTTTGAGTTTTGAGAGAGAGAGATAAGAGGAAGACTTCTTAAAGTGGTTCTTACTTCTTCCCCAAACCAAGTGTCTTTCCAGAAGGATATGCATGTTCCATCTCTGATTTGGTTGGCCATTCTGTCATGAATGGGAGGGGGCAGTGTTTCAGGATGGTCTTCCAAGGACCTTTGCTGGGTGCAAAGGTGGAGCTGTGTGCCAATTTATTGGATGTCCCCGAAGGGACAAAGGTGGAGCATGCGTTGAGGGGATTATACTCATATTTTGCATTAATCACCTTCCTTCATAGTGCTTTTTAATTACAAATGTGCTAGAATACACGCACCCAGGAACAACTTTGTATTGAGAAATATCCACTCTTACTCCTCTCTAGATATTTTCCTTCAAGATTCCTAGATTTCTTTCAAACCTAAATCTCCCTAATGATTGCTTTGATGATATTCACCCATATCACGTGGCTTTACTTTGGTGCTCTACTATGGATAAGGTTTGTAAACTATTGCATTTAGCACATGTATGTGTATCCAACACCCATGAAGCATCAAGACAATGGAGGAACAACTAAAAATTTCTAGTATAAGAACAATGAAAAATAAACAATCTTGATCTTCACCGTTCTTGCAGTTGAAACAAAGTATAGATACCGATGGCTGTAAAACAACAAAGGGTCATTTCCTCTGTAATTTTTCTGCTCTGTTTAATCCATCATCTTGAAAACTCCATAACAAAATATTTATCATCTTTGGCCAAATCTAGAAGCTTTTGTTTTTATATCTTGTAAAAGCTATTAACAACAATAGAGTAGCAGTTCACAGTAAGGAAAATAAATGCAAGGATGGGAAATTACCCTTTGTTAATCACTCTATTGTGCTAAAAATTAGGTTAATAAAGACTTTAAAATATTTCATGCAAGGTTTAGGAATTTGGTAGTTCGAGGTTCTGCCTTGTACAAAAGGTTCTTCCAATAAGCATCTCTTTGTTTTGTTATGATCCATTGGATTTCTTGCAACGTTGTTGGTGAATTGAATGTCGCATAACATTTTATCTAAATTATGAGTATCGATCTTTAGCTCCGTCAAAAGTTTTGGAATCTACATTCCTTCATAGATTCCAAAGAGCTTTGTATTCAGATTTTTGTGCTACTTCTTGCTATGACGACTTGTTCTTTACTAATCCAAGTGACCAAATTATCCCACATATAGGAGCGATATGTTACTATATATCTCCAGAAGACCAGAAGTTCTCTATCCCAATTAGCATCATTGTAGAGCTCTACAAGTCTGTTTGATGACTTTTTGAGTAACAGTCCATGACCTAGATTGCCTTTCAAGTATCTCAAAATCTTGTTTACAGCTCCCACGTTCATTTTGATTGTTAGCTAACAATGCTAGTAGAGTATGCAAGGTCAGATTTGGTAGGTGAAAGTTAAATTAACTTTCCCACAAGTCATCGATACGTGCCCTTGTTAATTGGAATAACCTCTTCACTTTTTAGTGTAAAGCTAGATTTGGATATGTGGGTGTTTGTGCTGGTCGACACCTAGATTTCTCGTCTATTTTAGTAAGTCTAGGATATATTTCCTAAGAGAAATTACAATGCTATTTTTGGATCATGCCACTTCCATGCCTAAAAAATATCTTAAACTTCCCATTTTTTGATTTCAAACTCAAGTTCTTAATTTGACATTGGTAATAGTTTTTGTTTTTTTTGTTTTTTTTAATAAGAACAACTGCTTTCATTGAGAAAAAGTGAAAGAATATACGGGCATACAAAAATCAAGCCCACAAAAAGTTACTTCTAACTAATGCTGTAGTGAATCTATCCAACCATGCACGTGGAGATTGCCTTAATCCATACAAAAACTTTCACAACTTCCACACAAAGTTGCTATTGGACCCGTCCCATCTTTTCGAATGCTAATGAACGGTTTCTCCTCCACCTAATGAGACCCCTCCGTTGCTAGCATCTCTGTCCTATGGAAACTTCCATAGATCTCTTTCCAGGATTTTCTCTGATCCTTGCAGGAATCTTTAAAATAGATAATAAAGTAAGCAAGTTTTACATAATAGAATTGGTTAAGTAGACGCATAGTCGATTTAAGCCAGCCTACTTCCTTTGGTGATGAAAGAAGCACATTGTAATCCTCTCAAAGAAAAATAAATTTTTTCTTAATCTCTCTCTGTTCAGTTGTAGATTGTAAATGCTTTTTGTCGAGTTCTTATATTTACACCCAGAGATAGCAAAACCTTCTTAACCAAATGGAAAAGTCTGATGATTCTTTGATTCTTTTTGTAGTTTTCAATGAAATTATTTCTTAAAAAAAAAAAAAAAACTCGCACCGGCATTGGTACTATGATGATTTGGATTCATATCTAGATTCCTGACTTCCTTTATTGACTTCTCTGATTGAATATATTTCTCTCTTCTACTTTTTTGGTTTGTGTTTATATGGCAAGATAGTTGTCAGTCAGTTGTCTTCTCCCTTCATAATTTTCGTACACTTGCTATGCCGAGAGCATAACAGCTTGCTCAGTGCTTGACACCAATAGTTGAACTTCATGACAGGAACCTCGTCTAGGAAGGTGGGGGCGAATCCCAGATGCTCGGAATGGAGTTGCAGTTCATCCCCTTAAGCTCTCATGA

mRNA sequence

ATGCCGAAGAAGAAAATCTCGGCCCCTCCTAAAGGCGCAAAGAAGGGGAAGAATTTTCCACTCAGTAAGGACCCTTTCTTCAGTTCTGAATCAAGGAAACGAAGGAAGATTGTTGATGATGAGATTGAGAGCGGTGAGTCAGACGAGGATAATGCGTTAGTGGGCGTTGAGGATGAGGAGTTTGAGGAAGAAACTGTTGACGAGAAAAGGAAGAGAGTAGCAATCGAGTACTTGGAGAAAATTCGGGAAATTGCGAAAAGAGAAAAGGAGAGGGAGGATGAAGAGAAGGATGAGGATGAGAGTGGTGACGAAGGCGAAAAAGATTCACTTGTTGCACAAATTCTTCAGCAAGAGCAACTCGAAGATAGTGGAAGGCTTCGGAGAGAAATTGCATCAAGGGTTCAGAAGCCAGTAGCTAGAGATGAATTTCAATTCTTGATTAAGCACAGACAATCTGTTACAGCTGTGGCTCTATCTGAGGATGATTTGAAGGGGTTTTCATCGTCAAAGGATGGTACCATCTTACACTGGGATGTAGATAGTGGTAAAGGGGAAAAATATCAATGGCCTAGTGATGAAGTATTGAGATTGCATGGGGCTAAGGATCCCCAAGGTCGGGCGACAAGGCATAGTAAAGTCACTTTATCATTAGCTGTTAGTTCTGATGGTCGATATTTGGCAAGTGGAGGCTTAGACCGCCATGTGCATATATGGGATACTCGTACAAGAGAGCATATTCAGGCATTTCCTGGTCATAGAGGACCTGTTTCGTGTTTGACTTTCAGGCAAGGGACTTCAGAACTTTTTTCTGGTTCATATGATCGAACTGTCAAGATATGGAATGTGGACGACAGAGCTTATATAAATACATTGTTTGGTCACCAAAGCGAAGTATTAACTATTGATTGCCTACGTAAAGAAAGATTACTTACTGTTGGACGTGATCGGAGTATGCAATTATGGAAGGTTCCAGAGGAGTCTCGTTTAGTATTTCGTGCTCCTGCATCATCCTTAGAATGTTGCTGTTTTATAAGCAATGATGAATTCTTATCTGGATCAGATGACGGCAGTATTGAGCTGTGGACTGCATTAAAAAAGAAGCCTGTTTTTATTGCACAAAATGCTCATCCTTCTTCATCATCTTCCATGAATTTGGAACTAAAGGAAAATGGTGCCGTCCCCAATGGTTGTATGGGAAATGGGGACAGTTTGTCAGCATACTCTTGGGTAAGTTCAGTCTCAGTATGTAGAAATAGTGACCTTGCTGCATCGGGTGCTGGCAACGGTTCTGTTCGTTTATGGGCTCTCACAAGTGATAAGAAAGATGTGAAACCATTATATGACCTCCCTCTGGTTGGGTTTGTGAACTCCTTGACCTTTGCCAAATCTGGAAGGTTTGTGGTGGCTGGAGTTGGGCAGGAACCTCGTCTAGGAAGGTGGGGGCGAATCCCAGATGCTCGGAATGGAGTTGCAGTTCATCCCCTTAAGCTCTCATGA

Coding sequence (CDS)

ATGCCGAAGAAGAAAATCTCGGCCCCTCCTAAAGGCGCAAAGAAGGGGAAGAATTTTCCACTCAGTAAGGACCCTTTCTTCAGTTCTGAATCAAGGAAACGAAGGAAGATTGTTGATGATGAGATTGAGAGCGGTGAGTCAGACGAGGATAATGCGTTAGTGGGCGTTGAGGATGAGGAGTTTGAGGAAGAAACTGTTGACGAGAAAAGGAAGAGAGTAGCAATCGAGTACTTGGAGAAAATTCGGGAAATTGCGAAAAGAGAAAAGGAGAGGGAGGATGAAGAGAAGGATGAGGATGAGAGTGGTGACGAAGGCGAAAAAGATTCACTTGTTGCACAAATTCTTCAGCAAGAGCAACTCGAAGATAGTGGAAGGCTTCGGAGAGAAATTGCATCAAGGGTTCAGAAGCCAGTAGCTAGAGATGAATTTCAATTCTTGATTAAGCACAGACAATCTGTTACAGCTGTGGCTCTATCTGAGGATGATTTGAAGGGGTTTTCATCGTCAAAGGATGGTACCATCTTACACTGGGATGTAGATAGTGGTAAAGGGGAAAAATATCAATGGCCTAGTGATGAAGTATTGAGATTGCATGGGGCTAAGGATCCCCAAGGTCGGGCGACAAGGCATAGTAAAGTCACTTTATCATTAGCTGTTAGTTCTGATGGTCGATATTTGGCAAGTGGAGGCTTAGACCGCCATGTGCATATATGGGATACTCGTACAAGAGAGCATATTCAGGCATTTCCTGGTCATAGAGGACCTGTTTCGTGTTTGACTTTCAGGCAAGGGACTTCAGAACTTTTTTCTGGTTCATATGATCGAACTGTCAAGATATGGAATGTGGACGACAGAGCTTATATAAATACATTGTTTGGTCACCAAAGCGAAGTATTAACTATTGATTGCCTACGTAAAGAAAGATTACTTACTGTTGGACGTGATCGGAGTATGCAATTATGGAAGGTTCCAGAGGAGTCTCGTTTAGTATTTCGTGCTCCTGCATCATCCTTAGAATGTTGCTGTTTTATAAGCAATGATGAATTCTTATCTGGATCAGATGACGGCAGTATTGAGCTGTGGACTGCATTAAAAAAGAAGCCTGTTTTTATTGCACAAAATGCTCATCCTTCTTCATCATCTTCCATGAATTTGGAACTAAAGGAAAATGGTGCCGTCCCCAATGGTTGTATGGGAAATGGGGACAGTTTGTCAGCATACTCTTGGGTAAGTTCAGTCTCAGTATGTAGAAATAGTGACCTTGCTGCATCGGGTGCTGGCAACGGTTCTGTTCGTTTATGGGCTCTCACAAGTGATAAGAAAGATGTGAAACCATTATATGACCTCCCTCTGGTTGGGTTTGTGAACTCCTTGACCTTTGCCAAATCTGGAAGGTTTGTGGTGGCTGGAGTTGGGCAGGAACCTCGTCTAGGAAGGTGGGGGCGAATCCCAGATGCTCGGAATGGAGTTGCAGTTCATCCCCTTAAGCTCTCATGA

Protein sequence

MPKKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNALVGVEDEEFEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQLEDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVDSGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGDSLSAYSWVSSVSVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQEPRLGRWGRIPDARNGVAVHPLKLS

Homology

[Close]

BLAST of HG10003560 vs. NCBI nr
Match: XP_011656049.1 (U3 snoRNP-associated protein-like YAO [Cucumis sativus] >KGN52615.1 hypothetical protein Csa_007926 [Cucumis sativus])

HSP 1 Score: 927.5 bits (2396), Expect = 4.7e-266
Identity = 473/505 (93.66%), Postives = 485/505 (96.04%), Query Frame = 0


Query: 1   MPKKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNALVGVEDEE 60
           M KKK SAPP GAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDN L+GVEDEE
Sbjct: 1   MTKKKTSAPPNGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNGLMGVEDEE 60

Query: 61  FEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQL 120
           FEEETVDEKRKRVA+EYLEKIREIAKREKER DEEKDEDES DEGEKDSLVA+ILQQEQL
Sbjct: 61  FEEETVDEKRKRVAVEYLEKIREIAKREKERGDEEKDEDESDDEGEKDSLVAKILQQEQL 120

Query: 121 EDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVD 180
           EDSGRLRREIASRVQKPVARDEFQ LIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDV+
Sbjct: 121 EDSGRLRREIASRVQKPVARDEFQLLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVE 180

Query: 181 SGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT 240
           SGKGEKY+WPSDEVLRLHGAKDPQGRAT+HSKVT SLAVSSDGRYLASGGLDRHVHIWDT
Sbjct: 181 SGKGEKYRWPSDEVLRLHGAKDPQGRATKHSKVTFSLAVSSDGRYLASGGLDRHVHIWDT 240

Query: 241 RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLT 300
           RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQS+VLT
Sbjct: 241 RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSDVLT 300

Query: 301 IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL 360
           IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL
Sbjct: 301 IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL 360

Query: 361 WTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD-------SLSAYSWVSSV 420
           WTALKKKPVFI +NAH SSSSS NLELKENGA+PNGCMGNGD       +LSAYSW+SSV
Sbjct: 361 WTALKKKPVFIVRNAHSSSSSSTNLELKENGAIPNGCMGNGDANHNTSHNLSAYSWISSV 420

Query: 421 SVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQ 480
           SVCRNSDLAASGAGNGSVRLWALTSDKKDV+PLYDLPLVGFVNSLTFA SGRFVVAGVGQ
Sbjct: 421 SVCRNSDLAASGAGNGSVRLWALTSDKKDVRPLYDLPLVGFVNSLTFANSGRFVVAGVGQ 480

Query: 481 EPRLGRWGRIPDARNGVAVHPLKLS 499
           EPRLGRWGRIP ARNGVAVHPLKLS
Sbjct: 481 EPRLGRWGRIPAARNGVAVHPLKLS 505

[Close]

BLAST of HG10003560 vs. NCBI nr
Match: XP_038890586.1 (U3 snoRNP-associated protein-like EMB2271 [Benincasa hispida])

HSP 1 Score: 926.0 bits (2392), Expect = 1.4e-265
Identity = 471/505 (93.27%), Postives = 485/505 (96.04%), Query Frame = 0


Query: 1   MPKKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNALVGVEDEE 60
           M KKK  APPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDN LVGVEDEE
Sbjct: 1   MTKKKSLAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNGLVGVEDEE 60

Query: 61  FEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQL 120
           FEEETVDEKRKRVAIEYLEKIREIAK+EKEREDEEKDEDE+GDEGEKDSLVAQILQQEQL
Sbjct: 61  FEEETVDEKRKRVAIEYLEKIREIAKKEKEREDEEKDEDETGDEGEKDSLVAQILQQEQL 120

Query: 121 EDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVD 180
           EDSGRLRREIAS+VQKPVA+D FQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVD
Sbjct: 121 EDSGRLRREIASKVQKPVAKDGFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVD 180

Query: 181 SGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT 240
           SGKGEKY WPSDE+LR HGAKDPQGRAT+HSKVTLSLAVSSDGRYLASGGLDRHVHIWDT
Sbjct: 181 SGKGEKYHWPSDEILRSHGAKDPQGRATKHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT 240

Query: 241 RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLT 300
           R+REHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQS+VLT
Sbjct: 241 RSREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSDVLT 300

Query: 301 IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL 360
           IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL
Sbjct: 301 IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL 360

Query: 361 WTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD-------SLSAYSWVSSV 420
           WT LKKKP+FI +NAH SSSSS NLELKENG +PNGCMGNGD       SLSAYSWVSSV
Sbjct: 361 WTVLKKKPIFIVRNAHSSSSSSTNLELKENGTIPNGCMGNGDVNHNTSHSLSAYSWVSSV 420

Query: 421 SVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQ 480
           SVCRNSDLAASGAGNGSVRLWALTSDKKDV+PLYDLPLVGF+NSLTFAKSGRFVVAGVGQ
Sbjct: 421 SVCRNSDLAASGAGNGSVRLWALTSDKKDVRPLYDLPLVGFLNSLTFAKSGRFVVAGVGQ 480

Query: 481 EPRLGRWGRIPDARNGVAVHPLKLS 499
           EPRLGRWGRIP A+NGVAVHPLKLS
Sbjct: 481 EPRLGRWGRIPAAQNGVAVHPLKLS 505

[Close]

BLAST of HG10003560 vs. NCBI nr
Match: KAA0039341.1 (U3 snoRNP-associated protein-like YAO [Cucumis melo var. makuwa] >TYK00524.1 U3 snoRNP-associated protein-like YAO [Cucumis melo var. makuwa])

HSP 1 Score: 924.9 bits (2389), Expect = 3.0e-265
Identity = 473/503 (94.04%), Postives = 482/503 (95.83%), Query Frame = 0


Query: 3   KKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNALVGVEDEEFE 62
           KKK SAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDN LVGVEDEEFE
Sbjct: 2   KKKSSAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNGLVGVEDEEFE 61

Query: 63  EETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQLED 122
           EETVDEKRKRVA+EYLEKIREIA REKER DEEKDEDES DEGEKDSLVAQILQQEQLED
Sbjct: 62  EETVDEKRKRVAVEYLEKIREIANREKERGDEEKDEDESDDEGEKDSLVAQILQQEQLED 121

Query: 123 SGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVDSG 182
           SGRLRREIASRVQKPVA+DEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDV+SG
Sbjct: 122 SGRLRREIASRVQKPVAKDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVESG 181

Query: 183 KGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRT 242
           KGEKYQWPSDEVLRLHGAKDPQGRAT+HSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRT
Sbjct: 182 KGEKYQWPSDEVLRLHGAKDPQGRATKHSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRT 241

Query: 243 REHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLTID 302
           REHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVL ID
Sbjct: 242 REHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLAID 301

Query: 303 CLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWT 362
           CLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLE CCFISNDEFLSGSDDGSIELWT
Sbjct: 302 CLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLESCCFISNDEFLSGSDDGSIELWT 361

Query: 363 ALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD-------SLSAYSWVSSVSV 422
            LKKKPVFI +NAH SSSSS NLELKENG +PNGCMGNGD       +LSAYSW+SSVSV
Sbjct: 362 VLKKKPVFIVRNAHSSSSSSTNLELKENGVIPNGCMGNGDTNHNTSHNLSAYSWISSVSV 421

Query: 423 CRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQEP 482
           CRNSDLAASGAGNGSVRLWALTSDKKDV+PLYDLPLVGFVNSLTFA SGRFVVAGVGQEP
Sbjct: 422 CRNSDLAASGAGNGSVRLWALTSDKKDVRPLYDLPLVGFVNSLTFANSGRFVVAGVGQEP 481

Query: 483 RLGRWGRIPDARNGVAVHPLKLS 499
           RLGRWGRIP ARNGVAVHPLKLS
Sbjct: 482 RLGRWGRIPAARNGVAVHPLKLS 504

[Close]

BLAST of HG10003560 vs. NCBI nr
Match: XP_008459515.1 (PREDICTED: U3 snoRNP-associated protein-like YAO [Cucumis melo] >XP_008459516.1 PREDICTED: U3 snoRNP-associated protein-like YAO [Cucumis melo])

HSP 1 Score: 920.2 bits (2377), Expect = 7.5e-264
Identity = 471/503 (93.64%), Postives = 480/503 (95.43%), Query Frame = 0


Query: 3   KKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNALVGVEDEEFE 62
           KKK SAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDN LVGVEDEEFE
Sbjct: 2   KKKSSAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNGLVGVEDEEFE 61

Query: 63  EETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQLED 122
           EETVDEKRKRVA+EYLEKIREIA REKER DEEKDED S DEGEKD LVAQILQQEQLED
Sbjct: 62  EETVDEKRKRVAVEYLEKIREIANREKERGDEEKDEDASDDEGEKDLLVAQILQQEQLED 121

Query: 123 SGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVDSG 182
           SGRLRREIASRVQKPVA+DEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDV+SG
Sbjct: 122 SGRLRREIASRVQKPVAKDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVESG 181

Query: 183 KGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRT 242
           KGEKYQWPSDEVLRLHGAKDPQGRAT+HSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRT
Sbjct: 182 KGEKYQWPSDEVLRLHGAKDPQGRATKHSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRT 241

Query: 243 REHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLTID 302
           REHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVL ID
Sbjct: 242 REHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLAID 301

Query: 303 CLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWT 362
           CLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLE CCFISNDEFLSGSDDGSIELWT
Sbjct: 302 CLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLESCCFISNDEFLSGSDDGSIELWT 361

Query: 363 ALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD-------SLSAYSWVSSVSV 422
            LKKKPVFI +NAH SSSSS NLELKENG +PNGCMGNGD       +LSAYSW+SSVSV
Sbjct: 362 VLKKKPVFIVRNAHSSSSSSTNLELKENGVIPNGCMGNGDTNHNTSHNLSAYSWISSVSV 421

Query: 423 CRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQEP 482
           CRNSDLAASGAGNGSVRLWALTSDKKDV+PLYDLPLVGFVNSLTFA SGRFVVAGVGQEP
Sbjct: 422 CRNSDLAASGAGNGSVRLWALTSDKKDVRPLYDLPLVGFVNSLTFANSGRFVVAGVGQEP 481

Query: 483 RLGRWGRIPDARNGVAVHPLKLS 499
           RLGRWGRIP ARNGVAVHPLKLS
Sbjct: 482 RLGRWGRIPAARNGVAVHPLKLS 504

[Close]

BLAST of HG10003560 vs. NCBI nr
Match: KAG7029820.1 (U3 snoRNP-associated protein-like YAO, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 907.9 bits (2345), Expect = 3.8e-260
Identity = 465/505 (92.08%), Postives = 475/505 (94.06%), Query Frame = 0


Query: 1   MPKKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNALVGVEDEE 60
           M KKK  APPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDN  VG ED E
Sbjct: 1   MAKKKTLAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNGFVGAEDVE 60

Query: 61  FEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQL 120
           FEEET DEKRKRVA EYLEKIREIA+REKERED+EKDEDES DEGEKDSLVAQILQQEQL
Sbjct: 61  FEEETADEKRKRVASEYLEKIREIARREKEREDKEKDEDESDDEGEKDSLVAQILQQEQL 120

Query: 121 EDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVD 180
           EDSGR+RREIASRVQ PVA DEFQ L+KHRQSVTAVALSEDD KGFSSSKDGTIL WDVD
Sbjct: 121 EDSGRVRREIASRVQNPVASDEFQLLVKHRQSVTAVALSEDDSKGFSSSKDGTILRWDVD 180

Query: 181 SGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT 240
           SGKGEKYQWPSDE LRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT
Sbjct: 181 SGKGEKYQWPSDEALRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT 240

Query: 241 RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLT 300
           RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNV+DRAYINTLFGHQSEVLT
Sbjct: 241 RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVEDRAYINTLFGHQSEVLT 300

Query: 301 IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL 360
           IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGS DGSIEL
Sbjct: 301 IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSSDGSIEL 360

Query: 361 WTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD-------SLSAYSWVSSV 420
           WTALKKKPV+I +NAHPSS S  +LELKENGA+PNGCMGNGD       S SAYSWVSSV
Sbjct: 361 WTALKKKPVYIVRNAHPSSLSCSHLELKENGAIPNGCMGNGDANHNTSHSSSAYSWVSSV 420

Query: 421 SVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQ 480
           SVCRNSDLAASGAGNGSVRLWALTSDKKDV+PLYDLPLVGFVNSLTFAKSGRFVVAGVGQ
Sbjct: 421 SVCRNSDLAASGAGNGSVRLWALTSDKKDVRPLYDLPLVGFVNSLTFAKSGRFVVAGVGQ 480

Query: 481 EPRLGRWGRIPDARNGVAVHPLKLS 499
           EPRLGRWGRIP ARNGVAVHPLKLS
Sbjct: 481 EPRLGRWGRIPAARNGVAVHPLKLS 505

[Close]

BLAST of HG10003560 vs. ExPASy Swiss-Prot
Match: Q9M0V4 (U3 snoRNP-associated protein-like YAO OS=Arabidopsis thaliana OX=3702 GN=YAO PE=2 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 1.1e-156
Identity = 299/517 (57.83%), Postives = 378/517 (73.11%), Query Frame = 0


Query: 3   KKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIV--DDEIESGESD-EDNALVG---- 62
           KKK  +  +G KKG N    +DPFF  E +KRRK+   DD+IES +SD E+N   G    
Sbjct: 7   KKKGGSFKRGGKKGSN---ERDPFFEEEPKKRRKVSYDDDDIESVDSDAEENGFTGGDED 66

Query: 63  -------VEDE-EFEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEK 122
                  VEDE EF +ET  EKRKR+A E L + RE  +RE+E  D + D+DE  DE  K
Sbjct: 67  GRRVDGEVEDEDEFADETAGEKRKRLAEEMLNRRREAMRREREEADNDDDDDEDDDETIK 126

Query: 123 DSLVAQILQQEQLEDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFS 182
            SL+     Q+Q EDSGR+RR IASRVQ+P++ D F  ++KHR+SV +VALS+DD +GFS
Sbjct: 127 KSLM-----QKQQEDSGRIRRLIASRVQEPLSTDGFSVIVKHRRSVVSVALSDDDSRGFS 186

Query: 183 SSKDGTILHWDVDSGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLA 242
           +SKDGTI+HWDV SGK +KY WPSDE+L+ HG K  + R   HS+ +L+LAVSSDGRYLA
Sbjct: 187 ASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLA 246

Query: 243 SGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAY 302
           +GG+DRHVHIWD RTREH+QAFPGHR  VSCL FR GTSEL+SGS+DRTVK+WNV+D+A+
Sbjct: 247 TGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAF 306

Query: 303 INTLFGHQSEVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISND 362
           I    GHQ E+L ID LRKER LTVGRDR+M   KVPE +R+++RAPASSLE CCFIS++
Sbjct: 307 ITENHGHQGEILAIDALRKERALTVGRDRTMLYHKVPESTRMIYRAPASSLESCCFISDN 366

Query: 363 EFLSGSDDGSIELWTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD----- 422
           E+LSGSD+G++ LW  LKKKPVF+ +NAH             +G   NG + NGD     
Sbjct: 367 EYLSGSDNGTVALWGMLKKKPVFVFKNAHQDI---------PDGITTNGILENGDHEPVN 426

Query: 423 -SLSAYSWVSSVSVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFA 482
            + SA SWV++V+  R SDLAASGAGNG VRLWA+ ++   ++PLY+LPL GFVNSL FA
Sbjct: 427 NNCSANSWVNAVATSRGSDLAASGAGNGFVRLWAVETNA--IRPLYELPLTGFVNSLAFA 486

Query: 483 KSGRFVVAGVGQEPRLGRWGRIPDARNGVAVHPLKLS 499
           KSG+F++AGVGQE R GRWG +  A+NGVA+HPL+L+
Sbjct: 487 KSGKFLIAGVGQETRFGRWGCLKSAQNGVAIHPLRLA 504

[Close]

BLAST of HG10003560 vs. ExPASy Swiss-Prot
Match: Q3MKM6 (U3 snoRNP-associated protein-like EMB2271 OS=Arabidopsis thaliana OX=3702 GN=EMB2271 PE=2 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 2.3e-154
Identity = 287/491 (58.45%), Postives = 364/491 (74.13%), Query Frame = 0


Query: 12  GAK-KGKNFPLSKDPFFSSESRKRRKI---VDDEIESGESDEDNALVGVEDEEFEEETVD 71
           GAK +GK   +  DPF   E+ KRRK     DD+IES ES+E+  +    ++EF  ETV 
Sbjct: 10  GAKRRGKKSSIDHDPFLEEETEKRRKFNYDDDDDIESVESEEEGKVGEEVEDEFAHETVG 69

Query: 72  EKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQLEDSGRLR 131
           EKRKR+A + L +I E  +RE E ++EE       D+  +DSLVA+ L QEQLE SGR+R
Sbjct: 70  EKRKRLAEDTLNRIEEAKQREHEEDNEE-------DDDFRDSLVAKTLMQEQLEKSGRVR 129

Query: 132 REIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVDSGKGEKY 191
           R  A RVQ   + D+F+ ++KH+ SVT VALS+DD +GFS SKDGTILHWDV SGK ++Y
Sbjct: 130 RANALRVQDLQSSDKFRVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGKSDEY 189

Query: 192 QWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRTREHIQ 251
           +WPSDEVL+ HG K  +   TRH+K +L+LAVSSDGRYLA+GG+D HVH+WD RTREH+Q
Sbjct: 190 KWPSDEVLKSHGLKFQESWYTRHNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHVQ 249

Query: 252 AFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLTIDCLRKE 311
           AF GH G VS L FR+GT+ELFSGSYD T+ IWN + R YI + FGHQSE+L+ID L +E
Sbjct: 250 AFTGHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSIDALGRE 309

Query: 312 RLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWTALKKK 371
           R+L+VGRDR+MQL+KVPE +RL++RA  S+ ECCCF+++DEFLSGSD+GSI LW+ LKKK
Sbjct: 310 RVLSVGRDRTMQLYKVPESTRLIYRASESNFECCCFVNSDEFLSGSDNGSIALWSILKKK 369

Query: 372 PVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGDSLSAYSWVSSVSVCRNSDLAASGAG 431
           PVFI  NAH          + ++ +V + C        A SWVSSV+VCR S+LAASGAG
Sbjct: 370 PVFIVNNAHH--------VIADHDSVNHNC------TPACSWVSSVAVCRGSELAASGAG 429

Query: 432 NGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQEPRLGRWGRIPDAR 491
           NG VRLW + S    ++PLY+LPL GFVNSL FAKSGRF++AGVGQEPRLGRWG +  A+
Sbjct: 430 NGCVRLWGVESGSSAIQPLYELPLPGFVNSLAFAKSGRFLIAGVGQEPRLGRWGCLKSAQ 479

Query: 492 NGVAVHPLKLS 499
           NGVA+HPL+LS
Sbjct: 490 NGVAIHPLRLS 479

[Close]

BLAST of HG10003560 vs. ExPASy Swiss-Prot
Match: Q75LV5 (U3 snoRNP-associated protein-like YAOH OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0625900 PE=2 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 7.0e-148
Identity = 283/510 (55.49%), Postives = 366/510 (71.76%), Query Frame = 0


Query: 2   PKKKISAP-PKGAKKGKNFPLSKDPFFSSESRKRR-KIVDDEIESGESDEDN----ALVG 61
           P+K++S P P+   +G+     +DPFF SE ++RR    D++IES +SD +     A  G
Sbjct: 5   PRKRVSRPKPRATSRGRGGG-DEDPFFESEPKRRRGGGRDEDIESEDSDLEGVAAAAAGG 64

Query: 62  V-------EDEEFEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKD 121
           V       E+EE E+ET  EK+ R+A E L+K+ + A+R   R ++++DEDE  + G + 
Sbjct: 65  VGDDGEEEEEEEEEQETAGEKKMRIAKELLKKVTDAARR---RREDDEDEDEGEEAGRR- 124

Query: 122 SLVAQILQQEQLEDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSS 181
             VA IL + Q E+SGR R E+A R+ +P   D F+ L+KHRQ VTAV LS+D  KGFS+
Sbjct: 125 -RVADILLKRQFEESGRKRMELADRILQPDPEDGFKMLVKHRQPVTAVVLSKDSDKGFSA 184

Query: 182 SKDGTILHWDVDSGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLAS 241
           SKDG I+HWDV++GK EKY WPS+ VL  H AK P   + + SK  L+LAVS+DGRYLAS
Sbjct: 185 SKDGVIVHWDVETGKSEKYLWPSENVLVSHHAKPP--LSAKRSKQVLALAVSADGRYLAS 244

Query: 242 GGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYI 301
           GGLDRH+H+WD R+REHIQAF GHRG +SCL+F   +SELFSGS+DR +  WN +DR Y+
Sbjct: 245 GGLDRHIHLWDVRSREHIQAFSGHRGAISCLSFGPDSSELFSGSFDRKIMQWNAEDRTYM 304

Query: 302 NTLFGHQSEVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPA-SSLECCCFISND 361
           N LFGHQ+EVLT+D L K+RLLTV RDR+M LWK+PEES+L+FRAPA +SLECCCFI + 
Sbjct: 305 NCLFGHQNEVLTMDALSKDRLLTVARDRTMHLWKIPEESQLLFRAPATASLECCCFIDDK 364

Query: 362 EFLSGSDDGSIELWTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGDSLSAY 421
           EFL+GSDDGS+ELW+ ++KKP  I +NAHP   +  NL   EN    NG        SA 
Sbjct: 365 EFLTGSDDGSVELWSIMRKKPTHIIRNAHPVFRN--NLNSLENNVEENGIHKPESVSSAQ 424

Query: 422 SWVSSVSVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFV 481
           SWVS+++  R SDLAASGA NGSVRLWA+  D K ++PL+ L L GFVNSL   KSGRF+
Sbjct: 425 SWVSAIAARRGSDLAASGAANGSVRLWAIEPDSKGIRPLFSLRLDGFVNSLAIPKSGRFI 484

Query: 482 VAGVGQEPRLGRWGRIPDARNGVAVHPLKL 498
           VAGVGQEPRLGRWGR+  A+NGV +HP++L
Sbjct: 485 VAGVGQEPRLGRWGRVRSAQNGVVIHPIRL 504

[Close]

BLAST of HG10003560 vs. ExPASy Swiss-Prot
Match: Q91WM3 (U3 small nucleolar RNA-interacting protein 2 OS=Mus musculus OX=10090 GN=Rrp9 PE=1 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 9.3e-84
Identity = 186/466 (39.91%), Postives = 274/466 (58.80%), Query Frame = 0


Query: 38  VDDEIESGESDEDNALVGVEDEEFE--EETVDEKRKRVAIEYLEKIREIAKREKEREDEE 97
           +++EI S    E  A    E+EE E  EET  EK+ R+A  YLE++R+        ++EE
Sbjct: 45  MNEEISSDSESESLAPRKTEEEEEEELEETAQEKKLRLAKLYLEQLRQ--------QEEE 104

Query: 98  KDEDESGDEGEKDSLVAQILQQEQLEDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTA 157
           K E  + +E +    VA  L+++ LE  GRL++ +A  +Q P   D  + L  H+ S+T 
Sbjct: 105 KAEARAFEEDQ----VAGRLKEDVLEQRGRLQKSVAKEIQAPAPTD-IRVLRGHQLSITC 164

Query: 158 VALSEDDLKGFSSSKDGTILHWDVDSGKGEKYQWPSDEVLRLH----GAKDPQGRATRHS 217
           + ++ DDL  FS++KD TI+ W V++G+            +LH      K  QG+   HS
Sbjct: 165 LVITPDDLAIFSAAKDCTIIKWSVETGR------------KLHVIPRAKKGAQGQPAGHS 224

Query: 218 KVTLSLAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSG 277
              L +A+SSDG+YLASG   + + IW+ ++ +H+  F GHR  VS L FR+GT +L+S 
Sbjct: 225 SHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRKGTHQLYST 284

Query: 278 SYDRTVKIWNVDDRAYINTLFGHQSEVLTIDCLRKERLLTV-GRDRSMQLWKVPEESRLV 337
           S+DR+VK+WN  + +Y+ TLFGHQ  V  +D L +E  +T  GRD ++++WK+PEES+LV
Sbjct: 285 SHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQLV 344

Query: 338 FRAPASSLECCCFISNDEFLSGSDDGSIELWTALKKKPVFIAQNAHPSSSSSMNLELKEN 397
           F     S++C   I+ +  +SG+DDGS+ LW   KK+P+ + + AH              
Sbjct: 345 FYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQREAH-------------- 404

Query: 398 GAVPNGCMGNGDSLSAYSWVSSVSVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLP 457
                G  G    L    WVSSV+   N+DL A+G+ N  VRLW      + + PL D+P
Sbjct: 405 -----GLHGE-PGLEQPFWVSSVAALLNTDLVATGSHNARVRLWQCGEGFRQLDPLCDIP 464

Query: 458 LVGFVNSLTFAKSGRFVVAGVGQEPRLGRWGRIPDARNGVAVHPLK 497
           LVGF+NSL F+ +G F+VAGVGQE RLGRW RI +ARN V + PL+
Sbjct: 465 LVGFINSLKFSSAGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLR 465

[Close]

BLAST of HG10003560 vs. ExPASy Swiss-Prot
Match: O43818 (U3 small nucleolar RNA-interacting protein 2 OS=Homo sapiens OX=9606 GN=RRP9 PE=1 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 2.8e-80
Identity = 191/503 (37.97%), Postives = 286/503 (56.86%), Query Frame = 0


Query: 4   KKISAPPKGAKKGKNFPLSKDPFFSSESRKRRK---IVDDEIESGESDEDNALVGVEDEE 63
           +K   P  GA  G      +    S+  R + K    +++EI S    E  A    E+EE
Sbjct: 8   RKRGKPASGAGAGAGAGKRRRKADSAGDRGKSKGGGKMNEEISSDSESESLAPRKPEEEE 67

Query: 64  FE--EETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQE 123
            E  EET  EK+ R+A  YLE++R+        ++EEK E  + +E +    VA  L+++
Sbjct: 68  EEELEETAQEKKLRLAKLYLEQLRQ--------QEEEKAEARAFEEDQ----VAGRLKED 127

Query: 124 QLEDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWD 183
            LE  GRL++ +A  +Q P + D  + L  H+ S+T + ++ DD   FS++KD +I+ W 
Sbjct: 128 VLEQRGRLQKLVAKEIQAPASAD-IRVLRGHQLSITCLVVTPDDSAIFSAAKDCSIIKWS 187

Query: 184 VDSGKGEKYQWPSDEVLRLH----GAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRH 243
           V+SG+            +LH      K  +G+   HS   L +A+SSDG+YLASG   + 
Sbjct: 188 VESGR------------KLHVIPRAKKGAEGKPPGHSSHVLCMAISSDGKYLASGDRSKL 247

Query: 244 VHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGH 303
           + IW+ ++ +H+  F GHR  VS L FR+GT +L+S S+DR+VK+WNV + +Y+ TLFGH
Sbjct: 248 ILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGH 307

Query: 304 QSEVLTIDCLRKERLLTV-GRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGS 363
           Q  V  +D L +E  +T  GRD ++++WK+PEES+LVF     S++C   I+ +  +SG+
Sbjct: 308 QDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQLVFYGHQGSIDCIHLINEEHMVSGA 367

Query: 364 DDGSIELWTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGDSLSAYSWVSSV 423
           DDGS+ LW   KK+P+ + + AH                   G  G    L    W+SSV
Sbjct: 368 DDGSVALWGLSKKRPLALQREAH-------------------GLRGE-PGLEQPFWISSV 427

Query: 424 SVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQ 483
           +   N+DL A+G+ +  VRLW      + +  L D+PLVGF+NSL F+ SG F+VAGVGQ
Sbjct: 428 AALLNTDLVATGSHSSCVRLWQCGEGFRQLDLLCDIPLVGFINSLKFSSSGDFLVAGVGQ 465

Query: 484 EPRLGRWGRIPDARNGVAVHPLK 497
           E RLGRW RI +ARN V + PL+
Sbjct: 488 EHRLGRWWRIKEARNSVCIIPLR 465

[Close]

BLAST of HG10003560 vs. ExPASy TrEMBL
Match: A0A0A0KSP4 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G647380 PE=4 SV=1)

HSP 1 Score: 927.5 bits (2396), Expect = 2.3e-266
Identity = 473/505 (93.66%), Postives = 485/505 (96.04%), Query Frame = 0


Query: 1   MPKKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNALVGVEDEE 60
           M KKK SAPP GAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDN L+GVEDEE
Sbjct: 1   MTKKKTSAPPNGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNGLMGVEDEE 60

Query: 61  FEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQL 120
           FEEETVDEKRKRVA+EYLEKIREIAKREKER DEEKDEDES DEGEKDSLVA+ILQQEQL
Sbjct: 61  FEEETVDEKRKRVAVEYLEKIREIAKREKERGDEEKDEDESDDEGEKDSLVAKILQQEQL 120

Query: 121 EDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVD 180
           EDSGRLRREIASRVQKPVARDEFQ LIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDV+
Sbjct: 121 EDSGRLRREIASRVQKPVARDEFQLLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVE 180

Query: 181 SGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT 240
           SGKGEKY+WPSDEVLRLHGAKDPQGRAT+HSKVT SLAVSSDGRYLASGGLDRHVHIWDT
Sbjct: 181 SGKGEKYRWPSDEVLRLHGAKDPQGRATKHSKVTFSLAVSSDGRYLASGGLDRHVHIWDT 240

Query: 241 RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLT 300
           RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQS+VLT
Sbjct: 241 RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSDVLT 300

Query: 301 IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL 360
           IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL
Sbjct: 301 IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL 360

Query: 361 WTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD-------SLSAYSWVSSV 420
           WTALKKKPVFI +NAH SSSSS NLELKENGA+PNGCMGNGD       +LSAYSW+SSV
Sbjct: 361 WTALKKKPVFIVRNAHSSSSSSTNLELKENGAIPNGCMGNGDANHNTSHNLSAYSWISSV 420

Query: 421 SVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQ 480
           SVCRNSDLAASGAGNGSVRLWALTSDKKDV+PLYDLPLVGFVNSLTFA SGRFVVAGVGQ
Sbjct: 421 SVCRNSDLAASGAGNGSVRLWALTSDKKDVRPLYDLPLVGFVNSLTFANSGRFVVAGVGQ 480

Query: 481 EPRLGRWGRIPDARNGVAVHPLKLS 499
           EPRLGRWGRIP ARNGVAVHPLKLS
Sbjct: 481 EPRLGRWGRIPAARNGVAVHPLKLS 505

[Close]

BLAST of HG10003560 vs. ExPASy TrEMBL
Match: A0A5D3BMM6 (U3 snoRNP-associated protein-like YAO OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001340 PE=4 SV=1)

HSP 1 Score: 924.9 bits (2389), Expect = 1.5e-265
Identity = 473/503 (94.04%), Postives = 482/503 (95.83%), Query Frame = 0


Query: 3   KKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNALVGVEDEEFE 62
           KKK SAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDN LVGVEDEEFE
Sbjct: 2   KKKSSAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNGLVGVEDEEFE 61

Query: 63  EETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQLED 122
           EETVDEKRKRVA+EYLEKIREIA REKER DEEKDEDES DEGEKDSLVAQILQQEQLED
Sbjct: 62  EETVDEKRKRVAVEYLEKIREIANREKERGDEEKDEDESDDEGEKDSLVAQILQQEQLED 121

Query: 123 SGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVDSG 182
           SGRLRREIASRVQKPVA+DEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDV+SG
Sbjct: 122 SGRLRREIASRVQKPVAKDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVESG 181

Query: 183 KGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRT 242
           KGEKYQWPSDEVLRLHGAKDPQGRAT+HSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRT
Sbjct: 182 KGEKYQWPSDEVLRLHGAKDPQGRATKHSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRT 241

Query: 243 REHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLTID 302
           REHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVL ID
Sbjct: 242 REHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLAID 301

Query: 303 CLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWT 362
           CLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLE CCFISNDEFLSGSDDGSIELWT
Sbjct: 302 CLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLESCCFISNDEFLSGSDDGSIELWT 361

Query: 363 ALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD-------SLSAYSWVSSVSV 422
            LKKKPVFI +NAH SSSSS NLELKENG +PNGCMGNGD       +LSAYSW+SSVSV
Sbjct: 362 VLKKKPVFIVRNAHSSSSSSTNLELKENGVIPNGCMGNGDTNHNTSHNLSAYSWISSVSV 421

Query: 423 CRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQEP 482
           CRNSDLAASGAGNGSVRLWALTSDKKDV+PLYDLPLVGFVNSLTFA SGRFVVAGVGQEP
Sbjct: 422 CRNSDLAASGAGNGSVRLWALTSDKKDVRPLYDLPLVGFVNSLTFANSGRFVVAGVGQEP 481

Query: 483 RLGRWGRIPDARNGVAVHPLKLS 499
           RLGRWGRIP ARNGVAVHPLKLS
Sbjct: 482 RLGRWGRIPAARNGVAVHPLKLS 504

[Close]

BLAST of HG10003560 vs. ExPASy TrEMBL
Match: A0A1S3CAG2 (U3 snoRNP-associated protein-like YAO OS=Cucumis melo OX=3656 GN=LOC103498631 PE=4 SV=1)

HSP 1 Score: 920.2 bits (2377), Expect = 3.6e-264
Identity = 471/503 (93.64%), Postives = 480/503 (95.43%), Query Frame = 0


Query: 3   KKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNALVGVEDEEFE 62
           KKK SAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDN LVGVEDEEFE
Sbjct: 2   KKKSSAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNGLVGVEDEEFE 61

Query: 63  EETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQLED 122
           EETVDEKRKRVA+EYLEKIREIA REKER DEEKDED S DEGEKD LVAQILQQEQLED
Sbjct: 62  EETVDEKRKRVAVEYLEKIREIANREKERGDEEKDEDASDDEGEKDLLVAQILQQEQLED 121

Query: 123 SGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVDSG 182
           SGRLRREIASRVQKPVA+DEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDV+SG
Sbjct: 122 SGRLRREIASRVQKPVAKDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVESG 181

Query: 183 KGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRT 242
           KGEKYQWPSDEVLRLHGAKDPQGRAT+HSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRT
Sbjct: 182 KGEKYQWPSDEVLRLHGAKDPQGRATKHSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRT 241

Query: 243 REHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLTID 302
           REHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVL ID
Sbjct: 242 REHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLAID 301

Query: 303 CLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWT 362
           CLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLE CCFISNDEFLSGSDDGSIELWT
Sbjct: 302 CLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLESCCFISNDEFLSGSDDGSIELWT 361

Query: 363 ALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD-------SLSAYSWVSSVSV 422
            LKKKPVFI +NAH SSSSS NLELKENG +PNGCMGNGD       +LSAYSW+SSVSV
Sbjct: 362 VLKKKPVFIVRNAHSSSSSSTNLELKENGVIPNGCMGNGDTNHNTSHNLSAYSWISSVSV 421

Query: 423 CRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQEP 482
           CRNSDLAASGAGNGSVRLWALTSDKKDV+PLYDLPLVGFVNSLTFA SGRFVVAGVGQEP
Sbjct: 422 CRNSDLAASGAGNGSVRLWALTSDKKDVRPLYDLPLVGFVNSLTFANSGRFVVAGVGQEP 481

Query: 483 RLGRWGRIPDARNGVAVHPLKLS 499
           RLGRWGRIP ARNGVAVHPLKLS
Sbjct: 482 RLGRWGRIPAARNGVAVHPLKLS 504

[Close]

BLAST of HG10003560 vs. ExPASy TrEMBL
Match: A0A6J1EP44 (U3 snoRNP-associated protein-like YAO OS=Cucurbita moschata OX=3662 GN=LOC111436269 PE=4 SV=1)

HSP 1 Score: 905.6 bits (2339), Expect = 9.2e-260
Identity = 464/505 (91.88%), Postives = 474/505 (93.86%), Query Frame = 0


Query: 1   MPKKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNALVGVEDEE 60
           M KKK  APPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDN  VG ED E
Sbjct: 1   MAKKKTLAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNGFVGAEDVE 60

Query: 61  FEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQL 120
           FEEET DEKRKRVA EYLEKIREIA+REKERED+EKDEDES DEGEKDSLVAQILQQEQL
Sbjct: 61  FEEETADEKRKRVASEYLEKIREIARREKEREDKEKDEDESDDEGEKDSLVAQILQQEQL 120

Query: 121 EDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVD 180
           EDSGR+RREIASRVQ PVA DEFQ L+KHRQSVTAVALSEDD KGFSSSKDGTIL WDVD
Sbjct: 121 EDSGRVRREIASRVQNPVASDEFQLLVKHRQSVTAVALSEDDSKGFSSSKDGTILCWDVD 180

Query: 181 SGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT 240
           SGKGEKYQWPSDE LRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT
Sbjct: 181 SGKGEKYQWPSDEALRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT 240

Query: 241 RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLT 300
           RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNV+DRAYINTLFGHQSEVLT
Sbjct: 241 RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVEDRAYINTLFGHQSEVLT 300

Query: 301 IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL 360
           IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGS DGSIEL
Sbjct: 301 IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSSDGSIEL 360

Query: 361 WTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD-------SLSAYSWVSSV 420
           W ALKKKPV+I +NAHPSS S  NLELKENGA+PNGCMGNGD       S SAYSWVSSV
Sbjct: 361 WIALKKKPVYIVRNAHPSSLSCSNLELKENGAIPNGCMGNGDANHNTSHSSSAYSWVSSV 420

Query: 421 SVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQ 480
           SVCRNSDLAASGAGNGSVRLWALTSDKKDV+PLYDLPLVGFVNS+TFAKSGRFVVAGVGQ
Sbjct: 421 SVCRNSDLAASGAGNGSVRLWALTSDKKDVRPLYDLPLVGFVNSMTFAKSGRFVVAGVGQ 480

Query: 481 EPRLGRWGRIPDARNGVAVHPLKLS 499
           EPRLGRWGRIP ARNGVAVHPLKLS
Sbjct: 481 EPRLGRWGRIPAARNGVAVHPLKLS 505

[Close]

BLAST of HG10003560 vs. ExPASy TrEMBL
Match: A0A6J1KB32 (U3 snoRNP-associated protein-like EMB2271 OS=Cucurbita maxima OX=3661 GN=LOC111492261 PE=4 SV=1)

HSP 1 Score: 898.7 bits (2321), Expect = 1.1e-257
Identity = 460/505 (91.09%), Postives = 471/505 (93.27%), Query Frame = 0


Query: 1   MPKKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNALVGVEDEE 60
           M K K  APPKGAKKGKNFPLSKDPFFSSE RKRRKIVDDEIESGESDEDN  V  ED E
Sbjct: 1   MAKNKTLAPPKGAKKGKNFPLSKDPFFSSEPRKRRKIVDDEIESGESDEDNGFVSAEDVE 60

Query: 61  FEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQL 120
           FEEET DEKRKRVA EYLEKIREIA+REKERED+EKDEDESGDEGEKDSLVAQILQQEQL
Sbjct: 61  FEEETADEKRKRVASEYLEKIREIARREKEREDKEKDEDESGDEGEKDSLVAQILQQEQL 120

Query: 121 EDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVD 180
           EDSGR+RREIASRVQ PVA DEFQ L+KHRQSVTAVALSEDD KGFSSSKDGTIL WDVD
Sbjct: 121 EDSGRVRREIASRVQNPVASDEFQLLVKHRQSVTAVALSEDDSKGFSSSKDGTILRWDVD 180

Query: 181 SGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT 240
           SGKGEKYQWPSDE LRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWD 
Sbjct: 181 SGKGEKYQWPSDEALRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDI 240

Query: 241 RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLT 300
           RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNV+DRAYINTLFGHQSEVLT
Sbjct: 241 RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVEDRAYINTLFGHQSEVLT 300

Query: 301 IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL 360
           IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGS +GSIEL
Sbjct: 301 IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSSNGSIEL 360

Query: 361 WTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD-------SLSAYSWVSSV 420
           WTALKKKPV+I +NAHPSS S  NLELKENGA+PNGCMGNGD       S SA+SWVSSV
Sbjct: 361 WTALKKKPVYIVRNAHPSSLSCSNLELKENGAIPNGCMGNGDVNHNTSPSSSAHSWVSSV 420

Query: 421 SVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQ 480
           SVCRNSDL ASGAGNGSVRLWALTSDKKDV+PLYDLPLVGFVNSLTFAKSGRFVVAGVGQ
Sbjct: 421 SVCRNSDLTASGAGNGSVRLWALTSDKKDVRPLYDLPLVGFVNSLTFAKSGRFVVAGVGQ 480

Query: 481 EPRLGRWGRIPDARNGVAVHPLKLS 499
           EPRLGRWGRIP ARNGVAVHPLKLS
Sbjct: 481 EPRLGRWGRIPAARNGVAVHPLKLS 505

[Close]

BLAST of HG10003560 vs. TAIR 10
Match: AT4G05410.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 554.7 bits (1428), Expect = 7.7e-158
Identity = 299/517 (57.83%), Postives = 378/517 (73.11%), Query Frame = 0


Query: 3   KKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIV--DDEIESGESD-EDNALVG---- 62
           KKK  +  +G KKG N    +DPFF  E +KRRK+   DD+IES +SD E+N   G    
Sbjct: 7   KKKGGSFKRGGKKGSN---ERDPFFEEEPKKRRKVSYDDDDIESVDSDAEENGFTGGDED 66

Query: 63  -------VEDE-EFEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEK 122
                  VEDE EF +ET  EKRKR+A E L + RE  +RE+E  D + D+DE  DE  K
Sbjct: 67  GRRVDGEVEDEDEFADETAGEKRKRLAEEMLNRRREAMRREREEADNDDDDDEDDDETIK 126

Query: 123 DSLVAQILQQEQLEDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFS 182
            SL+     Q+Q EDSGR+RR IASRVQ+P++ D F  ++KHR+SV +VALS+DD +GFS
Sbjct: 127 KSLM-----QKQQEDSGRIRRLIASRVQEPLSTDGFSVIVKHRRSVVSVALSDDDSRGFS 186

Query: 183 SSKDGTILHWDVDSGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLA 242
           +SKDGTI+HWDV SGK +KY WPSDE+L+ HG K  + R   HS+ +L+LAVSSDGRYLA
Sbjct: 187 ASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLA 246

Query: 243 SGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAY 302
           +GG+DRHVHIWD RTREH+QAFPGHR  VSCL FR GTSEL+SGS+DRTVK+WNV+D+A+
Sbjct: 247 TGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAF 306

Query: 303 INTLFGHQSEVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISND 362
           I    GHQ E+L ID LRKER LTVGRDR+M   KVPE +R+++RAPASSLE CCFIS++
Sbjct: 307 ITENHGHQGEILAIDALRKERALTVGRDRTMLYHKVPESTRMIYRAPASSLESCCFISDN 366

Query: 363 EFLSGSDDGSIELWTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD----- 422
           E+LSGSD+G++ LW  LKKKPVF+ +NAH             +G   NG + NGD     
Sbjct: 367 EYLSGSDNGTVALWGMLKKKPVFVFKNAHQDI---------PDGITTNGILENGDHEPVN 426

Query: 423 -SLSAYSWVSSVSVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFA 482
            + SA SWV++V+  R SDLAASGAGNG VRLWA+ ++   ++PLY+LPL GFVNSL FA
Sbjct: 427 NNCSANSWVNAVATSRGSDLAASGAGNGFVRLWAVETNA--IRPLYELPLTGFVNSLAFA 486

Query: 483 KSGRFVVAGVGQEPRLGRWGRIPDARNGVAVHPLKLS 499
           KSG+F++AGVGQE R GRWG +  A+NGVA+HPL+L+
Sbjct: 487 KSGKFLIAGVGQETRFGRWGCLKSAQNGVAIHPLRLA 504

[Close]

BLAST of HG10003560 vs. TAIR 10
Match: AT4G21130.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 547.0 bits (1408), Expect = 1.6e-155
Identity = 287/491 (58.45%), Postives = 364/491 (74.13%), Query Frame = 0


Query: 12  GAK-KGKNFPLSKDPFFSSESRKRRKI---VDDEIESGESDEDNALVGVEDEEFEEETVD 71
           GAK +GK   +  DPF   E+ KRRK     DD+IES ES+E+  +    ++EF  ETV 
Sbjct: 10  GAKRRGKKSSIDHDPFLEEETEKRRKFNYDDDDDIESVESEEEGKVGEEVEDEFAHETVG 69

Query: 72  EKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQLEDSGRLR 131
           EKRKR+A + L +I E  +RE E ++EE       D+  +DSLVA+ L QEQLE SGR+R
Sbjct: 70  EKRKRLAEDTLNRIEEAKQREHEEDNEE-------DDDFRDSLVAKTLMQEQLEKSGRVR 129

Query: 132 REIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVDSGKGEKY 191
           R  A RVQ   + D+F+ ++KH+ SVT VALS+DD +GFS SKDGTILHWDV SGK ++Y
Sbjct: 130 RANALRVQDLQSSDKFRVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGKSDEY 189

Query: 192 QWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRTREHIQ 251
           +WPSDEVL+ HG K  +   TRH+K +L+LAVSSDGRYLA+GG+D HVH+WD RTREH+Q
Sbjct: 190 KWPSDEVLKSHGLKFQESWYTRHNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHVQ 249

Query: 252 AFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLTIDCLRKE 311
           AF GH G VS L FR+GT+ELFSGSYD T+ IWN + R YI + FGHQSE+L+ID L +E
Sbjct: 250 AFTGHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSIDALGRE 309

Query: 312 RLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWTALKKK 371
           R+L+VGRDR+MQL+KVPE +RL++RA  S+ ECCCF+++DEFLSGSD+GSI LW+ LKKK
Sbjct: 310 RVLSVGRDRTMQLYKVPESTRLIYRASESNFECCCFVNSDEFLSGSDNGSIALWSILKKK 369

Query: 372 PVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGDSLSAYSWVSSVSVCRNSDLAASGAG 431
           PVFI  NAH          + ++ +V + C        A SWVSSV+VCR S+LAASGAG
Sbjct: 370 PVFIVNNAHH--------VIADHDSVNHNC------TPACSWVSSVAVCRGSELAASGAG 429

Query: 432 NGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQEPRLGRWGRIPDAR 491
           NG VRLW + S    ++PLY+LPL GFVNSL FAKSGRF++AGVGQEPRLGRWG +  A+
Sbjct: 430 NGCVRLWGVESGSSAIQPLYELPLPGFVNSLAFAKSGRFLIAGVGQEPRLGRWGCLKSAQ 479

Query: 492 NGVAVHPLKLS 499
           NGVA+HPL+LS
Sbjct: 490 NGVAIHPLRLS 479

[Close]

BLAST of HG10003560 vs. TAIR 10
Match: AT1G48630.1 (receptor for activated C kinase 1B )

HSP 1 Score: 104.0 bits (258), Expect = 3.6e-22
Identity = 77/293 (26.28%), Postives = 125/293 (42.66%), Query Frame = 0


Query: 149 HRQSVTAVALSEDDLKGFSSSKDGTILHWDVDSGKGEKYQWPSDEVLRLHGAKDPQGRAT 208
           H   V  V LS D     S S DG +  WD+ +G+  +                   R  
Sbjct: 62  HSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTR-------------------RFV 121

Query: 209 RHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT--RTREHIQAFPGHRGPVSCLTFRQGT- 268
            H+K  LS+A S+D R + S   DR + +W+T    +  I    GH+  VSC+ F   T 
Sbjct: 122 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTL 181

Query: 269 -SELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLTIDCLRKERL-LTVGRDRSMQLWKV 328
              + S S+D+TVK+WN+ +    NTL GH   + T+       L  + G+D  + LW +
Sbjct: 182 VPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL 241

Query: 329 PEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWTALKKKPVFIAQNAHPSSSSSM 388
            E  +L      S +   CF  N  +L  + + SI +W    K  V             +
Sbjct: 242 AEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVV-----------EDL 301

Query: 389 NLELKENGAVPNGCMGNGDSLSAYSWVSSVSVCRNSDLAASGAGNGSVRLWAL 437
            ++LK      +G  G G+      + +S++   + +   SG  +G +R+W +
Sbjct: 302 KVDLKAEAEKTDGSTGIGNKTKVI-YCTSLNWSADGNTLFSGYTDGVIRVWGI 323

[Close]

BLAST of HG10003560 vs. TAIR 10
Match: AT3G18130.1 (receptor for activated C kinase 1C )

HSP 1 Score: 102.1 bits (253), Expect = 1.4e-21
Identity = 78/296 (26.35%), Postives = 125/296 (42.23%), Query Frame = 0


Query: 146 LIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVDSGKGEKYQWPSDEVLRLHGAKDPQG 205
           L  H   V  V LS D     S S DG +  WD+ +G+  +                   
Sbjct: 59  LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTR------------------- 118

Query: 206 RATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT--RTREHIQAFPGHRGPVSCLTFRQ 265
           R   H+K  LS+A S+D R + S   DR + +W+T    +  I    GH+  VSC+ F  
Sbjct: 119 RFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSP 178

Query: 266 GT--SELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLTIDCLRKERL-LTVGRDRSMQL 325
            T    + S S+D+TVK+WN+ +    N+L GH   + T+       L  + G+D  + L
Sbjct: 179 NTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILL 238

Query: 326 WKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWTALKKKPVFIAQNAHPSSS 385
           W + E  +L      S +   CF  N  +L  + + SI +W    K  V           
Sbjct: 239 WDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVV----------- 298

Query: 386 SSMNLELKENGAVPNGCMGNGDSLSAYSWVSSVSVCRNSDLAASGAGNGSVRLWAL 437
             + ++LK       G +G G+      + +S++   +     SG  +G VR+W +
Sbjct: 299 EDLKVDLKSEAEKNEGGVGTGNQKKVI-YCTSLNWSADGSTLFSGYTDGVVRVWGI 323

[Close]

BLAST of HG10003560 vs. TAIR 10
Match: AT1G18080.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 89.7 bits (221), Expect = 7.0e-18
Identity = 75/297 (25.25%), Postives = 121/297 (40.74%), Query Frame = 0


Query: 146 LIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVDSGKGEKYQWPSDEVLRLHGAKDPQG 205
           L  H   V  V LS D     S S DG +  WD+ +G   +                   
Sbjct: 59  LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTR------------------- 118

Query: 206 RATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRTR---EHIQAFPGHRGPVSCLTFR 265
           R   H+K  LS+A S D R + S   DR + +W+T         +   GHR  VSC+ F 
Sbjct: 119 RFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFS 178

Query: 266 QGTSE--LFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLTIDCLRKERL-LTVGRDRSMQ 325
             T +  + S S+D+TVK+WN+ +    +TL GH   V T+       L  + G+D  + 
Sbjct: 179 PNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVL 238

Query: 326 LWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWTALKKKPVFIAQNAHPSS 385
           LW + E  +L      S +   CF  N  +L  + +  I++W    K  V          
Sbjct: 239 LWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIV---------- 298

Query: 386 SSSMNLELKENGAVPNGCMGNGDSLSAYSWVSSVSVCRNSDLAASGAGNGSVRLWAL 437
              + ++LK      +   G   +     + +S++   +     SG  +G +R+W +
Sbjct: 299 -EDLKVDLKAEAEKADN-SGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 324

The following BLAST results are available for this feature:

BLAST of HG10003560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656049.1	4.7e-266	93.66	U3 snoRNP-associated protein-like YAO [Cucumis sativus] >KGN52615.1 hypothetical...	[more]
XP_038890586.1	1.4e-265	93.27	U3 snoRNP-associated protein-like EMB2271 [Benincasa hispida]	[more]
KAA0039341.1	3.0e-265	94.04	U3 snoRNP-associated protein-like YAO [Cucumis melo var. makuwa] >TYK00524.1 U3 ...	[more]
XP_008459515.1	7.5e-264	93.64	PREDICTED: U3 snoRNP-associated protein-like YAO [Cucumis melo] >XP_008459516.1 ...	[more]
KAG7029820.1	3.8e-260	92.08	U3 snoRNP-associated protein-like YAO, partial [Cucurbita argyrosperma subsp. ar...	[more]

BLAST of HG10003560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0V4	1.1e-156	57.83	U3 snoRNP-associated protein-like YAO OS=Arabidopsis thaliana OX=3702 GN=YAO PE=...	[more]
Q3MKM6	2.3e-154	58.45	U3 snoRNP-associated protein-like EMB2271 OS=Arabidopsis thaliana OX=3702 GN=EMB...	[more]
Q75LV5	7.0e-148	55.49	U3 snoRNP-associated protein-like YAOH OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q91WM3	9.3e-84	39.91	U3 small nucleolar RNA-interacting protein 2 OS=Mus musculus OX=10090 GN=Rrp9 PE...	[more]
O43818	2.8e-80	37.97	U3 small nucleolar RNA-interacting protein 2 OS=Homo sapiens OX=9606 GN=RRP9 PE=...	[more]

BLAST of HG10003560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSP4	2.3e-266	93.66	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G...	[more]
A0A5D3BMM6	1.5e-265	94.04	U3 snoRNP-associated protein-like YAO OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CAG2	3.6e-264	93.64	U3 snoRNP-associated protein-like YAO OS=Cucumis melo OX=3656 GN=LOC103498631 PE...	[more]
A0A6J1EP44	9.2e-260	91.88	U3 snoRNP-associated protein-like YAO OS=Cucurbita moschata OX=3662 GN=LOC111436...	[more]
A0A6J1KB32	1.1e-257	91.09	U3 snoRNP-associated protein-like EMB2271 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of HG10003560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G05410.1	7.7e-158	57.83	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G21130.1	1.6e-155	58.45	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G48630.1	3.6e-22	26.28	receptor for activated C kinase 1B	[more]
AT3G18130.1	1.4e-21	26.35	receptor for activated C kinase 1C	[more]
AT1G18080.1	7.0e-18	25.25	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 75..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..42
None	No IPR available	PANTHER	PTHR19865:SF0	U3 SMALL NUCLEOLAR RNA-INTERACTING PROTEIN 2	coord: 5..496
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 146..183 score: 8.992876
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 249..283 score: 11.312864
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 207..242 score: 10.311051
None	No IPR available	CDD	cd00200	WD40	coord: 210..470 e-value: 1.99059E-39 score: 142.474
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 349..363 score: 34.92 coord: 226..240 score: 35.06 coord: 268..282 score: 41.55
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 140..178 e-value: 0.016 score: 24.4 coord: 200..239 e-value: 2.0E-5 score: 34.1 coord: 242..281 e-value: 1.7E-8 score: 44.3 coord: 324..362 e-value: 0.026 score: 23.7 coord: 284..322 e-value: 0.059 score: 22.5 coord: 400..435 e-value: 0.3 score: 20.2
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 210..239 e-value: 1.3E-5 score: 25.8 coord: 404..434 e-value: 0.086 score: 13.7 coord: 331..361 e-value: 0.0081 score: 17.0 coord: 245..281 e-value: 6.1E-6 score: 26.9
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 249..290 score: 14.61889
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 146..187 score: 11.043142
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 207..248 score: 13.516088
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 139..498 e-value: 1.2E-110 score: 371.4
IPR039241	Ribosomal RNA-processing protein Rrp9-like	PANTHER	PTHR19865	U3 SMALL NUCLEOLAR RNA INTERACTING PROTEIN 2	coord: 5..496
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 226..240
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 268..282
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 142..470

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10003560.1	HG10003560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0034511	U3 snoRNA binding