HG10003471 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10003471
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr08: 1863393 .. 1865423 (-)
RNA-Seq ExpressionHG10003471
SyntenyHG10003471
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGATTCTATTTTTTCTTCCCTTAAAAACTTTGCCTCTCATGGTCAATTGTCTAAAACATTTGAAGCCTTCTCCCTCATTCAATTGCGCACTAGTTATAATGATTCATTTGACCTCATCTTGCAATCTATCTCCATTCTTCTTGTATCATGCACCAATTGTAGCTCACTCCCATCAGGTAAGCAACTTCATGGTCACATTATCTCATCAGGTCTTGAGGAAGACTCCATTTTGGTCCCCAAGCTTGTCACGTTCTACTCAAGCTTTAAACTTCTGCCTGAGGCTCATACTCTTGTTGAGAATTCTAATTTATTTCACCCCTGTCCTTGGAATCTACTCATTACATCATATGTTAGAAATGAACTTCATGATGCAGCCATTTTAGCCTATAAACAGATGCTGAGTAAAGGGGTCAGACCAGATAATTTCACTTTTCCCTCCATTTTAAAGGCTTGTGGTGAAACACAGAATTTGGAATTTGGTTTAGAGGTTCACAAGTCTATTAATGCTTGGTCAACGAAATGGAGTTTGTTTGTTCAGAACGCTCTGATATCTATGTATGGAAGATGTGGAGAGGTGGACACTGCACGTAACTTGTTTGACAATATGCTTGAACGGGATGCAGTATCTTGGAATTCAATGATATCTTGTTATGCCTCCAAGGCTATGTGGAAGGAGGCATTTGAACTATTTGACAGCATGCAGAGTAAGTGTGTCGAAATTAATGTTGTAACTTGGAATATTATAGCTGGAGGTTGCTCACGGGTTGGTAATTTTACTCGAGCACTTAAGTTACTGTCTCAAATGAGAAATTTTGGTATTCATTTGGACAGTGTAGCAATGATAATTGGTTTAGGTGCTTGTTCACACATTGGTGCCATTAGATTGGGAAAGGAAATCCATGGCTTTACTATCAGACATTATTATCATAAGTTATCCACTGTTCAAAATGCTTTAGTTACCATGTATGCTCGTTGTAAAGACATTATGCATGCATATAAGTTATTTCGATTAAATGATGACAAAAGTATAATCACGTGGAATTCCATGCTTTCTGGTCTCACACACTTGGACCGGGTTAAGGATGCGTTGCATCTGTTTAGAGAATTGTTACAGTTTGGTGTAGAACCGAACTATGTGACATTTGCTAGCATTCTCCCTCTTTGTGCTCGAGTTGCAGATTTACAACATGGGAGAGAATTTCATTGCTACATTACTAAACGTCAAGATTTTAGGGATTATTTGTTATTGTGGAATGCTTTGGTGGATATGTACGCAAGGTCGGGCAAGGTTTTAGAAGCAAAAAGAGTTTTTGATTCATTAAGCAAGAAGGATGAAGTGACGTATACTTCCCTGATTGCAGGTTACGGTATGCAAGGAGAGGGGGGCAAAGCCCTAAGACTATTCAAAGAGATGAAAAGGTTCCAGATCAAACCAGATCATATAACTATGGTTGCTGTACTGTCAGCTTGCAGCCATTCAGGTCTCGTGAAACAAGGTGAACTCTTATTTGCAGAGATGCAAAGTTTGCATGGTCTAAGGCCCCATTTGGAACACTATGCTTGCATGGCAGACCTGTTTGGGAGGGTTGGTTTGTTGAACAAAGCAAAGGAAATTATCACTAGAATGCCTTACAGACCAACGTCTGCTATGTGGGCCACCCTTATTGGAGCATGTTGCATTCATGGAAACACAGATATCGGGGAATGGGCAGCAGAGAAACTTCTGGAAATGCGGCCCGAACATTCTGGTTACTATGTCTTGATTGCTAACATGTATGCTGCTGCAGGTTCTTGGAGTAAGTTGGCAAAAATAAGGACTCTTATGAGAGATTCTGGTGTTGCAAAAGTTCCTGGTTGTTCTTGGGTTGACGTTGGCTCTGAATTCGTCTCATTCTTGGTTGGGGATACATCTAATCCTCAAGCCCTTGAGTCTAAGCTCTTGTTAGACAGTTTGAACGATGTAATGAAACATGGTAGTCTAATGACGACAGATAGTTACGACGATATTGGCGATGACATTTTTTGA

mRNA sequence

ATGATTGATTCTATTTTTTCTTCCCTTAAAAACTTTGCCTCTCATGGTCAATTGTCTAAAACATTTGAAGCCTTCTCCCTCATTCAATTGCGCACTAGTTATAATGATTCATTTGACCTCATCTTGCAATCTATCTCCATTCTTCTTGTATCATGCACCAATTGTAGCTCACTCCCATCAGGTAAGCAACTTCATGGTCACATTATCTCATCAGGTCTTGAGGAAGACTCCATTTTGGTCCCCAAGCTTGTCACGTTCTACTCAAGCTTTAAACTTCTGCCTGAGGCTCATACTCTTGTTGAGAATTCTAATTTATTTCACCCCTGTCCTTGGAATCTACTCATTACATCATATGTTAGAAATGAACTTCATGATGCAGCCATTTTAGCCTATAAACAGATGCTGAGTAAAGGGGTCAGACCAGATAATTTCACTTTTCCCTCCATTTTAAAGGCTTGTGGTGAAACACAGAATTTGGAATTTGGTTTAGAGGTTCACAAGTCTATTAATGCTTGGTCAACGAAATGGAGTTTGTTTGTTCAGAACGCTCTGATATCTATGTATGGAAGATGTGGAGAGGTGGACACTGCACGTAACTTGTTTGACAATATGCTTGAACGGGATGCAGTATCTTGGAATTCAATGATATCTTGTTATGCCTCCAAGGCTATGTGGAAGGAGGCATTTGAACTATTTGACAGCATGCAGAGTAAGTGTGTCGAAATTAATGTTGTAACTTGGAATATTATAGCTGGAGGTTGCTCACGGGTTGGTAATTTTACTCGAGCACTTAAGTTACTGTCTCAAATGAGAAATTTTGGTATTCATTTGGACAGTGTAGCAATGATAATTGGTTTAGGTGCTTGTTCACACATTGGTGCCATTAGATTGGGAAAGGAAATCCATGGCTTTACTATCAGACATTATTATCATAAGTTATCCACTGTTCAAAATGCTTTAGTTACCATGTATGCTCGTTGTAAAGACATTATGCATGCATATAAGTTATTTCGATTAAATGATGACAAAAGTATAATCACGTGGAATTCCATGCTTTCTGGTCTCACACACTTGGACCGGGTTAAGGATGCGTTGCATCTGTTTAGAGAATTGTTACAGTTTGGTGTAGAACCGAACTATGTGACATTTGCTAGCATTCTCCCTCTTTGTGCTCGAGTTGCAGATTTACAACATGGGAGAGAATTTCATTGCTACATTACTAAACGTCAAGATTTTAGGGATTATTTGTTATTGTGGAATGCTTTGGTGGATATGTACGCAAGGTCGGGCAAGGTTTTAGAAGCAAAAAGAGTTTTTGATTCATTAAGCAAGAAGGATGAAGTGACGTATACTTCCCTGATTGCAGGTTACGGTATGCAAGGAGAGGGGGGCAAAGCCCTAAGACTATTCAAAGAGATGAAAAGGTTCCAGATCAAACCAGATCATATAACTATGGTTGCTGTACTGTCAGCTTGCAGCCATTCAGGTCTCGTGAAACAAGGTGAACTCTTATTTGCAGAGATGCAAAGTTTGCATGGTCTAAGGCCCCATTTGGAACACTATGCTTGCATGGCAGACCTGTTTGGGAGGGTTGGTTTGTTGAACAAAGCAAAGGAAATTATCACTAGAATGCCTTACAGACCAACGTCTGCTATGTGGGCCACCCTTATTGGAGCATGTTGCATTCATGGAAACACAGATATCGGGGAATGGGCAGCAGAGAAACTTCTGGAAATGCGGCCCGAACATTCTGGTTACTATGTCTTGATTGCTAACATGTATGCTGCTGCAGGTTCTTGGAGTAAGTTGGCAAAAATAAGGACTCTTATGAGAGATTCTGGTGTTGCAAAAGTTCCTGGTTGTTCTTGGGTTGACGTTGGCTCTGAATTCGTCTCATTCTTGGTTGGGGATACATCTAATCCTCAAGCCCTTGAGTCTAAGCTCTTGTTAGACAGTTTGAACGATGTAATGAAACATGGTAGTCTAATGACGACAGATAGTTACGACGATATTGGCGATGACATTTTTTGA

Coding sequence (CDS)

ATGATTGATTCTATTTTTTCTTCCCTTAAAAACTTTGCCTCTCATGGTCAATTGTCTAAAACATTTGAAGCCTTCTCCCTCATTCAATTGCGCACTAGTTATAATGATTCATTTGACCTCATCTTGCAATCTATCTCCATTCTTCTTGTATCATGCACCAATTGTAGCTCACTCCCATCAGGTAAGCAACTTCATGGTCACATTATCTCATCAGGTCTTGAGGAAGACTCCATTTTGGTCCCCAAGCTTGTCACGTTCTACTCAAGCTTTAAACTTCTGCCTGAGGCTCATACTCTTGTTGAGAATTCTAATTTATTTCACCCCTGTCCTTGGAATCTACTCATTACATCATATGTTAGAAATGAACTTCATGATGCAGCCATTTTAGCCTATAAACAGATGCTGAGTAAAGGGGTCAGACCAGATAATTTCACTTTTCCCTCCATTTTAAAGGCTTGTGGTGAAACACAGAATTTGGAATTTGGTTTAGAGGTTCACAAGTCTATTAATGCTTGGTCAACGAAATGGAGTTTGTTTGTTCAGAACGCTCTGATATCTATGTATGGAAGATGTGGAGAGGTGGACACTGCACGTAACTTGTTTGACAATATGCTTGAACGGGATGCAGTATCTTGGAATTCAATGATATCTTGTTATGCCTCCAAGGCTATGTGGAAGGAGGCATTTGAACTATTTGACAGCATGCAGAGTAAGTGTGTCGAAATTAATGTTGTAACTTGGAATATTATAGCTGGAGGTTGCTCACGGGTTGGTAATTTTACTCGAGCACTTAAGTTACTGTCTCAAATGAGAAATTTTGGTATTCATTTGGACAGTGTAGCAATGATAATTGGTTTAGGTGCTTGTTCACACATTGGTGCCATTAGATTGGGAAAGGAAATCCATGGCTTTACTATCAGACATTATTATCATAAGTTATCCACTGTTCAAAATGCTTTAGTTACCATGTATGCTCGTTGTAAAGACATTATGCATGCATATAAGTTATTTCGATTAAATGATGACAAAAGTATAATCACGTGGAATTCCATGCTTTCTGGTCTCACACACTTGGACCGGGTTAAGGATGCGTTGCATCTGTTTAGAGAATTGTTACAGTTTGGTGTAGAACCGAACTATGTGACATTTGCTAGCATTCTCCCTCTTTGTGCTCGAGTTGCAGATTTACAACATGGGAGAGAATTTCATTGCTACATTACTAAACGTCAAGATTTTAGGGATTATTTGTTATTGTGGAATGCTTTGGTGGATATGTACGCAAGGTCGGGCAAGGTTTTAGAAGCAAAAAGAGTTTTTGATTCATTAAGCAAGAAGGATGAAGTGACGTATACTTCCCTGATTGCAGGTTACGGTATGCAAGGAGAGGGGGGCAAAGCCCTAAGACTATTCAAAGAGATGAAAAGGTTCCAGATCAAACCAGATCATATAACTATGGTTGCTGTACTGTCAGCTTGCAGCCATTCAGGTCTCGTGAAACAAGGTGAACTCTTATTTGCAGAGATGCAAAGTTTGCATGGTCTAAGGCCCCATTTGGAACACTATGCTTGCATGGCAGACCTGTTTGGGAGGGTTGGTTTGTTGAACAAAGCAAAGGAAATTATCACTAGAATGCCTTACAGACCAACGTCTGCTATGTGGGCCACCCTTATTGGAGCATGTTGCATTCATGGAAACACAGATATCGGGGAATGGGCAGCAGAGAAACTTCTGGAAATGCGGCCCGAACATTCTGGTTACTATGTCTTGATTGCTAACATGTATGCTGCTGCAGGTTCTTGGAGTAAGTTGGCAAAAATAAGGACTCTTATGAGAGATTCTGGTGTTGCAAAAGTTCCTGGTTGTTCTTGGGTTGACGTTGGCTCTGAATTCGTCTCATTCTTGGTTGGGGATACATCTAATCCTCAAGCCCTTGAGTCTAAGCTCTTGTTAGACAGTTTGAACGATGTAATGAAACATGGTAGTCTAATGACGACAGATAGTTACGACGATATTGGCGATGACATTTTTTGA

Protein sequence

MIDSIFSSLKNFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTNCSSLPSGKQLHGHIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVRNELHDAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTKWSLFVQNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSMQSKCVEINVVTWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKEIHGFTIRHYYHKLSTVQNALVTMYARCKDIMHAYKLFRLNDDKSIITWNSMLSGLTHLDRVKDALHLFRELLQFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWNALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKPDHITMVAVLSACSHSGLVKQGELLFAEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEIITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDSGVAKVPGCSWVDVGSEFVSFLVGDTSNPQALESKLLLDSLNDVMKHGSLMTTDSYDDIGDDIF
Homology
[Close]
BLAST of HG10003471 vs. NCBI nr
Match: XP_038890628.1 (pentatricopeptide repeat-containing protein At1g71490 [Benincasa hispida] >XP_038890630.1 pentatricopeptide repeat-containing protein At1g71490 [Benincasa hispida])

HSP 1 Score: 1275.8 bits (3300), Expect = 0.0e+00
Identity = 623/658 (94.68%), Postives = 641/658 (97.42%), Query Frame = 0 

Query: 1   MIDSIFSSLKNFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTNCSSLPS 60
           MIDSIFSSLKNFAS+GQLSKTFEAFSLI+LR SYNDSFDLILQSISILLVSCTNCSSLP 
Sbjct: 38  MIDSIFSSLKNFASNGQLSKTFEAFSLIRLRASYNDSFDLILQSISILLVSCTNCSSLPP 97

Query: 61  GKQLHGHIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVR 120
           GKQLHGHII+SGLEEDS LVPKLVTFYSSFKLLPEAHTLVE SNLFHPC WNLLI SYVR
Sbjct: 98  GKQLHGHIITSGLEEDSFLVPKLVTFYSSFKLLPEAHTLVETSNLFHPCAWNLLIISYVR 157

Query: 121 NELHDAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTKWSLFV 180
           NELH+AAILAYKQMLSKGVRPDNFTFPSILKACGET+NLEFGLEVHKSINAWSTKWSLFV
Sbjct: 158 NELHEAAILAYKQMLSKGVRPDNFTFPSILKACGETRNLEFGLEVHKSINAWSTKWSLFV 217

Query: 181 QNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSMQSKCV 240
           QNAL+SMYGRCGEVDTARNLFDNMLE DAVSWNSMISCYASK MWKEAFELFD MQSKCV
Sbjct: 218 QNALVSMYGRCGEVDTARNLFDNMLEWDAVSWNSMISCYASKGMWKEAFELFDGMQSKCV 277

Query: 241 EINVVTWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKE 300
            INVVTWNIIAGGC RVGNFTRALKLLSQMRN GI+LD+VAM+IGLGACSHIGAIRLGKE
Sbjct: 278 GINVVTWNIIAGGCLRVGNFTRALKLLSQMRNLGIYLDNVAMVIGLGACSHIGAIRLGKE 337

Query: 301 IHGFTIRHYYHKLSTVQNALVTMYARCKDIMHAYKLFRLNDDKSIITWNSMLSGLTHLDR 360
           IHGFTIRHYYHKLST+QNALVTMYARCKDIMHAY LFRLNDDKSIITWNSMLSGLTHLDR
Sbjct: 338 IHGFTIRHYYHKLSTIQNALVTMYARCKDIMHAYMLFRLNDDKSIITWNSMLSGLTHLDR 397

Query: 361 VKDALHLFRELLQFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWN 420
           V+DALHLFRELL FGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWN
Sbjct: 398 VEDALHLFRELLLFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWN 457

Query: 421 ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKP 480
           ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLI+GYGMQGEG KALRLF+EMKRF+IKP
Sbjct: 458 ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLISGYGMQGEGAKALRLFEEMKRFEIKP 517

Query: 481 DHITMVAVLSACSHSGLVKQGELLFAEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEI 540
           DHITMVAVLSACSHSGL++QGELLFAEMQS+HGLRPHLEHYACMADLFGRVGLLNKAKEI
Sbjct: 518 DHITMVAVLSACSHSGLLEQGELLFAEMQSVHGLRPHLEHYACMADLFGRVGLLNKAKEI 577

Query: 541 ITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSW 600
           ITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEM PEHSGYYVLIANMYAAAGSW
Sbjct: 578 ITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMWPEHSGYYVLIANMYAAAGSW 637

Query: 601 SKLAKIRTLMRDSGVAKVPGCSWVDVGSEFVSFLVGDTSNPQALESKLLLDSLNDVMK 659
           SKLAKIRTLMRDSGVAKVPGCSWVDVGS FVSFLVGDTSNPQALESKL+LDSLNDVMK
Sbjct: 638 SKLAKIRTLMRDSGVAKVPGCSWVDVGSGFVSFLVGDTSNPQALESKLVLDSLNDVMK 695

[Close]
BLAST of HG10003471 vs. NCBI nr
Match: XP_022973516.1 (pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita maxima] >XP_022973518.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita maxima] >XP_022973519.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita maxima] >XP_022973520.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1252.3 bits (3239), Expect = 0.0e+00
Identity = 612/676 (90.53%), Postives = 642/676 (94.97%), Query Frame = 0 

Query: 1   MIDSIFSSLKNFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTNCSSLPS 60
           MI+SIF SLK+FASHGQLSK FEAFSL+QLR SYNDSFDLI+QSISILLVSCT CSSLPS
Sbjct: 38  MINSIFYSLKSFASHGQLSKAFEAFSLVQLRRSYNDSFDLIVQSISILLVSCTTCSSLPS 97

Query: 61  GKQLHGHIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVR 120
           GKQLHG IISSGLEEDSILVPKLVTFYSSFKLL EAHTLVENSNLFHPCPWNLLITSYVR
Sbjct: 98  GKQLHGRIISSGLEEDSILVPKLVTFYSSFKLLAEAHTLVENSNLFHPCPWNLLITSYVR 157

Query: 121 NELHDAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTKWSLFV 180
           NELH++AILAYKQMLSKGVRPDNFTFPSILKACGETQNL FGLEVHK IN+WS +WSLFV
Sbjct: 158 NELHESAILAYKQMLSKGVRPDNFTFPSILKACGETQNLGFGLEVHKCINSWSNQWSLFV 217

Query: 181 QNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSMQSKCV 240
           QNALISMYGRCGE+DTARNLFDNML+RDAVSWNSMISCYASK MWKEAFELFD MQSKC+
Sbjct: 218 QNALISMYGRCGELDTARNLFDNMLDRDAVSWNSMISCYASKGMWKEAFELFDIMQSKCL 277

Query: 241 EINVVTWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKE 300
           EIN+VTWNIIAGGC R+G FTRALKLLSQMRNFGIHLD VAMIIGLGACSHIGAIRLGKE
Sbjct: 278 EINIVTWNIIAGGCLRLGKFTRALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKE 337

Query: 301 IHGFTIRHYYHKLSTVQNALVTMYARCKDIMHAYKLFRLNDDKSIITWNSMLSGLTHLDR 360
           IHGFTIRH YHK STVQNAL+TMYARCKDIM AY LFRLNDDKSIITWNSMLSGL+H+DR
Sbjct: 338 IHGFTIRHCYHKSSTVQNALLTMYARCKDIMRAYILFRLNDDKSIITWNSMLSGLSHVDR 397

Query: 361 VKDALHLFRELLQFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWN 420
           V+DAL LFRE L FGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDF+DYLLLWN
Sbjct: 398 VEDALRLFREFLLFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFQDYLLLWN 457

Query: 421 ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKP 480
           ALVDMYARSGKV+EAKRVFDSLSKKDEVTYTSLIAGYGMQGEG KALRLF+EMK   IKP
Sbjct: 458 ALVDMYARSGKVIEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGRKALRLFEEMKSVDIKP 517

Query: 481 DHITMVAVLSACSHSGLVKQGELLFAEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEI 540
           DHITMVAVLSACSHSGLVKQGE+LFAEMQS+HGL PHLEHYACMADLFGRVGLL++AKEI
Sbjct: 518 DHITMVAVLSACSHSGLVKQGEVLFAEMQSVHGLSPHLEHYACMADLFGRVGLLDRAKEI 577

Query: 541 ITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSW 600
           ITRMPYRPTSAMWATLIGACCIH NTDIGEWAAEKLLEM+PEHSGYYVLIANMYAAAGSW
Sbjct: 578 ITRMPYRPTSAMWATLIGACCIHRNTDIGEWAAEKLLEMKPEHSGYYVLIANMYAAAGSW 637

Query: 601 SKLAKIRTLMRDSGVAKVPGCSWVDVGSEFVSFLVGDTSNPQALESKLLLDSLNDVMKHG 660
           SKLAKIRTLMRD GVAK PGCSWV+VGSEFVSFLVGDTSNPQALESK LLD LNDVMKHG
Sbjct: 638 SKLAKIRTLMRDYGVAKAPGCSWVEVGSEFVSFLVGDTSNPQALESKHLLDDLNDVMKHG 697

Query: 661 SLMTTDSYDDIGDDIF 677
           +L+ TD Y DIG+D+F
Sbjct: 698 TLVMTDDY-DIGNDVF 712

[Close]
BLAST of HG10003471 vs. NCBI nr
Match: KAG7025166.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1249.2 bits (3231), Expect = 0.0e+00
Identity = 612/676 (90.53%), Postives = 640/676 (94.67%), Query Frame = 0 

Query: 1   MIDSIFSSLKNFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTNCSSLPS 60
           MI SIF SLK+FASHGQLSK FEAFSL+QLR+SYNDSFDLI+QSISILLVSCT CSSLPS
Sbjct: 38  MITSIFDSLKSFASHGQLSKAFEAFSLVQLRSSYNDSFDLIVQSISILLVSCTTCSSLPS 97

Query: 61  GKQLHGHIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVR 120
           GKQLHG II SGLEEDSILVPKLVTFYSSFKLL EAHTLVENSNLFHPCPWNLLITSYVR
Sbjct: 98  GKQLHGRIILSGLEEDSILVPKLVTFYSSFKLLAEAHTLVENSNLFHPCPWNLLITSYVR 157

Query: 121 NELHDAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTKWSLFV 180
           NELH++AILAYKQMLSKGVRPDNFTFPSILKACGETQNL FGLEVHK IN+WS +WSLFV
Sbjct: 158 NELHESAILAYKQMLSKGVRPDNFTFPSILKACGETQNLGFGLEVHKCINSWSNQWSLFV 217

Query: 181 QNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSMQSKCV 240
           QNALISMYGRCGE+DTARNLFDNML+RDAVSWNSMISCYASK MWKEAFELFD MQSKC+
Sbjct: 218 QNALISMYGRCGELDTARNLFDNMLDRDAVSWNSMISCYASKGMWKEAFELFDIMQSKCL 277

Query: 241 EINVVTWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKE 300
           EIN+VTWNIIAGGC R+G FTRALKLLSQMRNFGIHLD VAMIIGLGACSHIGAIRLGKE
Sbjct: 278 EINIVTWNIIAGGCLRLGKFTRALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKE 337

Query: 301 IHGFTIRHYYHKLSTVQNALVTMYARCKDIMHAYKLFRLNDDKSIITWNSMLSGLTHLDR 360
           IHGFTIRH YHK STVQNAL+TMYARCKDI  AY LFR+NDDKSIITWNSMLSGL+H+DR
Sbjct: 338 IHGFTIRHCYHKSSTVQNALLTMYARCKDITRAYILFRINDDKSIITWNSMLSGLSHVDR 397

Query: 361 VKDALHLFRELLQFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWN 420
           V+DAL LFRELL FGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDF+DYLLLWN
Sbjct: 398 VEDALRLFRELLLFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFQDYLLLWN 457

Query: 421 ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKP 480
           ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEG KALRLF+EMK   IKP
Sbjct: 458 ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGRKALRLFEEMKSVDIKP 517

Query: 481 DHITMVAVLSACSHSGLVKQGELLFAEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEI 540
           DHITMVAVLSACSHSGLVKQGE+LFAEMQS+HGL P LEHYACMADLFGRVGLL++AKEI
Sbjct: 518 DHITMVAVLSACSHSGLVKQGEVLFAEMQSVHGLSPRLEHYACMADLFGRVGLLDRAKEI 577

Query: 541 ITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSW 600
           ITRMPYRPTSAMWATLIGACCIH NTDIGEWAAEKLLEM+PEHSGYYVLIANMYAAAGSW
Sbjct: 578 ITRMPYRPTSAMWATLIGACCIHRNTDIGEWAAEKLLEMKPEHSGYYVLIANMYAAAGSW 637

Query: 601 SKLAKIRTLMRDSGVAKVPGCSWVDVGSEFVSFLVGDTSNPQALESKLLLDSLNDVMKHG 660
           SKLAKIRTLMRD GVAK PGCSWV+VGSEFVSFLVGDTSNPQALESK LLD LNDVMKHG
Sbjct: 638 SKLAKIRTLMRDYGVAKAPGCSWVEVGSEFVSFLVGDTSNPQALESKHLLDGLNDVMKHG 697

Query: 661 SLMTTDSYDDIGDDIF 677
           +L+ TD Y DIGDDIF
Sbjct: 698 TLVMTDDY-DIGDDIF 712

[Close]
BLAST of HG10003471 vs. NCBI nr
Match: XP_022925519.1 (pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita moschata] >XP_022925520.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita moschata] >XP_022925521.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita moschata] >XP_022925522.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1246.5 bits (3224), Expect = 0.0e+00
Identity = 611/676 (90.38%), Postives = 639/676 (94.53%), Query Frame = 0 

Query: 1   MIDSIFSSLKNFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTNCSSLPS 60
           MI SIF SLK+FASHGQLSK FEAFSL+QLR SYNDSFDLI+QSISILLVSCT CSSLPS
Sbjct: 38  MITSIFDSLKSFASHGQLSKAFEAFSLVQLRGSYNDSFDLIVQSISILLVSCTTCSSLPS 97

Query: 61  GKQLHGHIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVR 120
           GKQLHG IISSGLEEDSILVPKLVTFYSSFKLL EAHTLVENSNLFHPCPWNLLITSYVR
Sbjct: 98  GKQLHGRIISSGLEEDSILVPKLVTFYSSFKLLAEAHTLVENSNLFHPCPWNLLITSYVR 157

Query: 121 NELHDAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTKWSLFV 180
           NELH++AILAYKQMLSKGVRPDNFTFPSILKACGETQNL FGLEVHK IN+WS +WSLFV
Sbjct: 158 NELHESAILAYKQMLSKGVRPDNFTFPSILKACGETQNLGFGLEVHKCINSWSNQWSLFV 217

Query: 181 QNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSMQSKCV 240
           QNALISMYGRCGE+DTARNLFDNML+RDAVSWNSMISCYAS  MWKEAFELFD MQSKC+
Sbjct: 218 QNALISMYGRCGELDTARNLFDNMLDRDAVSWNSMISCYASNGMWKEAFELFDIMQSKCL 277

Query: 241 EINVVTWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKE 300
           EIN+VTWNIIAGGC R+G FT+ALKLLSQMRNFGIHLD VAMIIGLGACSHIGAIRLGKE
Sbjct: 278 EINIVTWNIIAGGCLRLGKFTQALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKE 337

Query: 301 IHGFTIRHYYHKLSTVQNALVTMYARCKDIMHAYKLFRLNDDKSIITWNSMLSGLTHLDR 360
           IHGFTIRH YHK STVQNAL+TMYARCKDIM AY LFRLNDDKSIITWNSMLSGL+H+DR
Sbjct: 338 IHGFTIRHCYHKSSTVQNALLTMYARCKDIMRAYILFRLNDDKSIITWNSMLSGLSHVDR 397

Query: 361 VKDALHLFRELLQFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWN 420
           V+DAL LFRELL +GVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDF+DYLLLWN
Sbjct: 398 VEDALRLFRELLLYGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFQDYLLLWN 457

Query: 421 ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKP 480
           ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEG KALRLF+EMK   IKP
Sbjct: 458 ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGRKALRLFEEMKSVDIKP 517

Query: 481 DHITMVAVLSACSHSGLVKQGELLFAEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEI 540
           DHITMVAVLSACSHSGLVKQGE+LFAEMQS+HGL P LEHYACMADLFGRVGLL++AKEI
Sbjct: 518 DHITMVAVLSACSHSGLVKQGEVLFAEMQSVHGLSPRLEHYACMADLFGRVGLLDRAKEI 577

Query: 541 ITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSW 600
           ITRMPYRPTSAMWATLIGACCIH NTDIGEWAAEKLLEM+PEHSGYYVLIANMYAAAGSW
Sbjct: 578 ITRMPYRPTSAMWATLIGACCIHRNTDIGEWAAEKLLEMKPEHSGYYVLIANMYAAAGSW 637

Query: 601 SKLAKIRTLMRDSGVAKVPGCSWVDVGSEFVSFLVGDTSNPQALESKLLLDSLNDVMKHG 660
           SKLAKIRTLMRD GVAK PGCSWV+VGSEFVSFLVGDTSNPQALESK LLD LNDVMKHG
Sbjct: 638 SKLAKIRTLMRDYGVAKAPGCSWVEVGSEFVSFLVGDTSNPQALESKHLLDGLNDVMKHG 697

Query: 661 SLMTTDSYDDIGDDIF 677
           +L+  D Y DIGDDIF
Sbjct: 698 TLVMIDDY-DIGDDIF 712

[Close]
BLAST of HG10003471 vs. NCBI nr
Match: XP_023535485.1 (pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023535486.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023535487.1 pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1245.3 bits (3221), Expect = 0.0e+00
Identity = 612/676 (90.53%), Postives = 640/676 (94.67%), Query Frame = 0 

Query: 1   MIDSIFSSLKNFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTNCSSLPS 60
           MI+SIF SLK+FASHGQLSK FEAFSL+QLR SYNDSFDLI+QSISILLVSCT CSSLPS
Sbjct: 38  MINSIFDSLKSFASHGQLSKAFEAFSLVQLRRSYNDSFDLIVQSISILLVSCTTCSSLPS 97

Query: 61  GKQLHGHIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVR 120
           GKQLHG IISSGLEEDSILVPKLVTFYSSFKLL EAHTLVENSNLFHPCPWNLLITSYVR
Sbjct: 98  GKQLHGCIISSGLEEDSILVPKLVTFYSSFKLLAEAHTLVENSNLFHPCPWNLLITSYVR 157

Query: 121 NELHDAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTKWSLFV 180
           NELH++AILAYKQMLSKGVRPDNFTFPSILKACGETQNL FGLEVHK IN+WS +WSLFV
Sbjct: 158 NELHESAILAYKQMLSKGVRPDNFTFPSILKACGETQNLGFGLEVHKCINSWSNQWSLFV 217

Query: 181 QNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSMQSKCV 240
           QNALISMYGRCGE+DTARNLFDNML+RDAVSWNSMISCYASK MWKEAFELFD MQSKC+
Sbjct: 218 QNALISMYGRCGELDTARNLFDNMLDRDAVSWNSMISCYASKGMWKEAFELFDIMQSKCL 277

Query: 241 EINVVTWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKE 300
           EIN+VTWNIIAGGC R+G FT+ALKLLSQMRNFGIHLD VAMIIGLGACSHIGAIRLGKE
Sbjct: 278 EINIVTWNIIAGGCLRLGKFTQALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKE 337

Query: 301 IHGFTIRHYYHKLSTVQNALVTMYARCKDIMHAYKLFRLNDDKSIITWNSMLSGLTHLDR 360
           IHGFTIRH YHK STVQNAL+TMYARCKDI  AY LFRLNDDKSIITWNSMLSGL+H+DR
Sbjct: 338 IHGFTIRHCYHKSSTVQNALLTMYARCKDITRAYILFRLNDDKSIITWNSMLSGLSHVDR 397

Query: 361 VKDALHLFRELLQFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWN 420
           V+DAL LFRELL FGVEPNYVT ASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWN
Sbjct: 398 VEDALRLFRELLLFGVEPNYVTCASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWN 457

Query: 421 ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKP 480
           ALVDMYARSGKV+EAKRVFDSLSKKDEVTYTSLIAGYGMQGEG KALRLF+EMK   IKP
Sbjct: 458 ALVDMYARSGKVIEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGRKALRLFEEMKSVDIKP 517

Query: 481 DHITMVAVLSACSHSGLVKQGELLFAEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEI 540
           DHITMVAVLSACSHSGLVKQGE+LFAEMQS+HGL P LEHYACMADLFGRVGLL++AKEI
Sbjct: 518 DHITMVAVLSACSHSGLVKQGEVLFAEMQSVHGLSPRLEHYACMADLFGRVGLLDRAKEI 577

Query: 541 ITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSW 600
           ITRMP RPTSAMWATLIGACCIH NTDIGEWAAEKLLEM+PEHSGYYVLIANMYAAAGSW
Sbjct: 578 ITRMPCRPTSAMWATLIGACCIHRNTDIGEWAAEKLLEMKPEHSGYYVLIANMYAAAGSW 637

Query: 601 SKLAKIRTLMRDSGVAKVPGCSWVDVGSEFVSFLVGDTSNPQALESKLLLDSLNDVMKHG 660
           SKLAKIRTLMRD GVAK PGCSWV+VGSEFVSFLVGDTSNPQALESK LLDSLNDVMKHG
Sbjct: 638 SKLAKIRTLMRDYGVAKAPGCSWVEVGSEFVSFLVGDTSNPQALESKHLLDSLNDVMKHG 697

Query: 661 SLMTTDSYDDIGDDIF 677
           +L+ TD Y DIGDDIF
Sbjct: 698 TLVMTDDY-DIGDDIF 712

[Close]
BLAST of HG10003471 vs. ExPASy Swiss-Prot
Match: Q9C9I6 (Pentatricopeptide repeat-containing protein At1g71490 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E67 PE=2 SV=1)

HSP 1 Score: 828.9 bits (2140), Expect = 4.0e-239
Identity = 397/656 (60.52%), Postives = 504/656 (76.83%), Query Frame = 0 

Query: 3   DSIFSSLKNFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTNCSSLPSGK 62
           +S+F SL + ASHG L   F+ FSL++L++S   S DL+L S + LL +C +  +  +G 
Sbjct: 4   ESLFKSLGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGV 63

Query: 63  QLHGHIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVRNE 122
           Q+H H ISSG+E  S+LVPKLVTFYS+F L  EA +++ENS++ HP PWN+LI SY +NE
Sbjct: 64  QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNE 123

Query: 123 LHDAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTKWSLFVQN 182
           L +  I AYK+M+SKG+RPD FT+PS+LKACGET ++ FG  VH SI   S K SL+V N
Sbjct: 124 LFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCN 183

Query: 183 ALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSMQSKCVEI 242
           ALISMY R   +  AR LFD M ERDAVSWN++I+CYAS+ MW EAFELFD M    VE+
Sbjct: 184 ALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEV 243

Query: 243 NVVTWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKEIH 302
           +V+TWNII+GGC + GN+  AL L+S+MRNF   LD VAMIIGL ACS IGAIRLGKEIH
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIH 303

Query: 303 GFTIRHYYHKLSTVQNALVTMYARCKDIMHAYKLFRLNDDKSIITWNSMLSGLTHLDRVK 362
           G  I   Y  +  V+N L+TMY++CKD+ HA  +FR  ++ S+ TWNS++SG   L++ +
Sbjct: 304 GLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSE 363

Query: 363 DALHLFRELLQFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWNAL 422
           +A HL RE+L  G +PN +T ASILPLCAR+A+LQHG+EFHCYI +R+ F+DY +LWN+L
Sbjct: 364 EASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSL 423

Query: 423 VDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKPDH 482
           VD+YA+SGK++ AK+V D +SK+DEVTYTSLI GYG QGEGG AL LFKEM R  IKPDH
Sbjct: 424 VDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDH 483

Query: 483 ITMVAVLSACSHSGLVKQGELLFAEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEIIT 542
           +T+VAVLSACSHS LV +GE LF +MQ  +G+RP L+H++CM DL+GR G L KAK+II 
Sbjct: 484 VTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIH 543

Query: 543 RMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSK 602
            MPY+P+ A WATL+ AC IHGNT IG+WAAEKLLEM+PE+ GYYVLIANMYAAAGSWSK
Sbjct: 544 NMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSK 603

Query: 603 LAKIRTLMRDSGVAKVPGCSWVDVGSEFVSFLVGDTSNPQALESKLLLDSLNDVMK 659
           LA++RT+MRD GV K PGC+W+D  S F  F VGDTS+P+A  +  LLD LN +MK
Sbjct: 604 LAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMK 659

[Close]
BLAST of HG10003471 vs. ExPASy Swiss-Prot
Match: Q4V389 (Pentatricopeptide repeat-containing protein At1g22830 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E24 PE=2 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 6.5e-197
Identity = 338/654 (51.68%), Postives = 459/654 (70.18%), Query Frame = 0 

Query: 5   IFSSLKNFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTNCSSLPSGKQL 64
           +F+S ++  SHGQL + F  FSL++ ++    S + +L S + LL +C   +    G+QL
Sbjct: 49  LFNSFRHCISHGQLYEAFRTFSLLRYQSG---SHEFVLYSSASLLSTCVGFNEFVPGQQL 108

Query: 65  HGHIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVRNELH 124
           H H ISSGLE DS+LVPKLVTFYS+F LL EA T+ ENS + HP PWN+LI SY+RN+  
Sbjct: 109 HAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRF 168

Query: 125 DAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTKWSLFVQNAL 184
             ++  YK+M+SKG+R D FT+PS++KAC    +  +G  VH SI   S + +L+V NAL
Sbjct: 169 QESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNAL 228

Query: 185 ISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSMQSKCVEINV 244
           ISMY R G+VD AR LFD M ERDAVSWN++I+CY S+    EAF+L D M    VE ++
Sbjct: 229 ISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASI 288

Query: 245 VTWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKEIHGF 304
           VTWN IAGGC   GN+  AL  +  MRN  + + SVAMI GL ACSHIGA++ GK  H  
Sbjct: 289 VTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCL 348

Query: 305 TIR--HYYHKLSTVQNALVTMYARCKDIMHAYKLFRLNDDKSIITWNSMLSGLTHLDRVK 364
            IR   + H +  V+N+L+TMY+RC D+ HA+ +F+  +  S+ TWNS++SG  + +R +
Sbjct: 349 VIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSE 408

Query: 365 DALHLFRELLQFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWNAL 424
           +   L +E+L  G  PN++T ASILPL ARV +LQHG+EFHCYI +RQ ++D L+LWN+L
Sbjct: 409 ETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 468

Query: 425 VDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKPDH 484
           VDMYA+SG+++ AKRVFDS+ K+D+VTYTSLI GYG  G+G  AL  FK+M R  IKPDH
Sbjct: 469 VDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDH 528

Query: 485 ITMVAVLSACSHSGLVKQGELLFAEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEIIT 544
           +TMVAVLSACSHS LV++G  LF +M+ + G+R  LEHY+CM DL+ R G L+KA++I  
Sbjct: 529 VTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFH 588

Query: 545 RMPYRPTSAMWATLIGACCIHGNTDIGEWAAEK-LLEMRPEHSGYYVLIANMYAAAGSWS 604
            +PY P+SAM ATL+ AC IHGNT+IGEWAA+K LLE +PEH G+Y+L+A+MYA  GSWS
Sbjct: 589 TIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 648

Query: 605 KLAKIRTLMRDSGVAKVPGCSWVDVGSEFVSFLVGDTSNPQALESKLLLDSLND 656
           KL  ++TL+ D GV K    + ++  SE    L G+ + P   +S +  +  +D
Sbjct: 649 KLVTVKTLLSDLGVQKAHEFALMETDSE----LDGENNKPMNDDSVINQEQSSD 695

[Close]
BLAST of HG10003471 vs. ExPASy Swiss-Prot
Match: Q9LFL5 (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 6.7e-117
Identity = 229/682 (33.58%), Postives = 370/682 (54.25%), Query Frame = 0 

Query: 7   SSLKNFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTNCSSLPSGKQLHG 66
           S ++++  +G  +K    F L+   +   D++     +   +  +C   SS+  G+  H 
Sbjct: 97  SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNY-----TFPFVFKACGEISSVRCGESAHA 156

Query: 67  HIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVRNELHDA 126
             + +G   +  +   LV  YS  + L +A  + +  +++    WN +I SY +      
Sbjct: 157 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 216

Query: 127 AILAYKQMLSK-GVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTKWSLFVQNALI 186
           A+  + +M ++ G RPDN T  ++L  C        G ++H          ++FV N L+
Sbjct: 217 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 276

Query: 187 SMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSMQSKCVEINVV 246
            MY +CG +D A  +F NM  +D VSWN+M++ Y+    +++A  LF+ MQ + ++++VV
Sbjct: 277 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 336

Query: 247 TWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKEIHGFT 306
           TW+    G ++ G    AL +  QM + GI  + V +I  L  C+ +GA+  GKEIH + 
Sbjct: 337 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 396

Query: 307 IRH-------YYHKLSTVQNALVTMYARCKDIMHAYKLF--RLNDDKSIITWNSMLSGLT 366
           I++        +   + V N L+ MYA+CK +  A  +F      ++ ++TW  M+ G +
Sbjct: 397 IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 456

Query: 367 HLDRVKDALHLFRELLQFGVE--PNYVTFASILPLCARVADLQHGREFHCYITKRQDFRD 426
                  AL L  E+ +   +  PN  T +  L  CA +A L+ G++ H Y  + Q    
Sbjct: 457 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 516

Query: 427 YLLLWNALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMK 486
            L + N L+DMYA+ G + +A+ VFD++  K+EVT+TSL+ GYGM G G +AL +F EM+
Sbjct: 517 PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 576

Query: 487 RFQIKPDHITMVAVLSACSHSGLVKQGELLFAEMQSLHGLRPHLEHYACMADLFGRVGLL 546
           R   K D +T++ VL ACSHSG++ QG   F  M+++ G+ P  EHYAC+ DL GR G L
Sbjct: 577 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 636

Query: 547 NKAKEIITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMY 606
           N A  +I  MP  P   +W   +  C IHG  ++GE+AAEK+ E+   H G Y L++N+Y
Sbjct: 637 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 696

Query: 607 AAAGSWSKLAKIRTLMRDSGVAKVPGCSWVDVGSEFVSFLVGDTSNPQALE-SKLLLDSL 666
           A AG W  + +IR+LMR  GV K PGCSWV+      +F VGD ++P A E  ++LLD +
Sbjct: 697 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHM 756

Query: 667 NDVMKHGSLMTTD-SYDDIGDD 675
             +   G +  T  +  D+ D+
Sbjct: 757 QRIKDIGYVPETGFALHDVDDE 773

[Close]
BLAST of HG10003471 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.3e-115
Identity = 219/642 (34.11%), Postives = 364/642 (56.70%), Query Frame = 0 

Query: 30  LRTSYNDSFDLILQSISILLVSCTNCSSLPSGKQLHGHIISSGLEEDSILVPKLVTF--- 89
           L +S +  +D I    S+ L+   NC +L S + +H  +I  GL   +  + KL+ F   
Sbjct: 20  LPSSSDPPYDSIRNHPSLSLLH--NCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCIL 79

Query: 90  YSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVRNELHDAAILAYKQMLSKGVRPDNFTF 149
              F+ LP A ++ +     +   WN +   +  +    +A+  Y  M+S G+ P+++TF
Sbjct: 80  SPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTF 139

Query: 150 PSILKACGETQNLEFGLEVHKSINAWSTKWSLFVQNALISMYGRCGEVDTARNLFDNMLE 209
           P +LK+C +++  + G ++H  +        L+V  +LISMY + G ++ A  +FD    
Sbjct: 140 PFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPH 199

Query: 210 RDAVSWNSMISCYASKAMWKEAFELFDSMQSKCVEINVVTWNIIAGGCSRVGNFTRALKL 269
           RD VS+ ++I  YAS+   + A +LFD +  K    +VV+WN +  G +  GN+  AL+L
Sbjct: 200 RDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALEL 259

Query: 270 LSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKEIHGFTIRHYYHKLSTVQNALVTMYAR 329
              M    +  D   M+  + AC+  G+I LG+++H +   H +     + NAL+ +Y++
Sbjct: 260 FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 319

Query: 330 CKDIMHAYKLFRLNDDKSIITWNSMLSGLTHLDRVKDALHLFRELLQFGVEPNYVTFASI 389
           C ++  A  LF     K +I+WN+++ G TH++  K+AL LF+E+L+ G  PN VT  SI
Sbjct: 320 CGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 379

Query: 390 LPLCARVADLQHGREFHCYITKR-QDFRDYLLLWNALVDMYARSGKVLEAKRVFDSLSKK 449
           LP CA +  +  GR  H YI KR +   +   L  +L+DMYA+ G +  A +VF+S+  K
Sbjct: 380 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 439

Query: 450 DEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKPDHITMVAVLSACSHSGLVKQGELLF 509
              ++ ++I G+ M G    +  LF  M++  I+PD IT V +LSACSHSG++  G  +F
Sbjct: 440 SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIF 499

Query: 510 AEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEIITRMPYRPTSAMWATLIGACCIHGN 569
             M   + + P LEHY CM DL G  GL  +A+E+I  M   P   +W +L+ AC +HGN
Sbjct: 500 RTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGN 559

Query: 570 TDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDSGVAKVPGCSWVD 629
            ++GE  AE L+++ PE+ G YVL++N+YA+AG W+++AK R L+ D G+ KVPGCS ++
Sbjct: 560 VELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIE 619

Query: 630 VGSEFVSFLVGDTSNPQALESKLLLDSLNDVMKHGSLMTTDS 668
           + S    F++GD  +P+  E   +L+ +  +++    +   S
Sbjct: 620 IDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTS 655

[Close]
BLAST of HG10003471 vs. ExPASy Swiss-Prot
Match: Q9LNU6 (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H21 PE=2 SV=2)

HSP 1 Score: 377.5 bits (968), Expect = 3.2e-103
Identity = 195/638 (30.56%), Postives = 335/638 (52.51%), Query Frame = 0 

Query: 56  SSLPSGKQLHGHIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLI 115
           SSL    Q H  I+ SG + D  +  KL+  YS++    +A  ++++        ++ LI
Sbjct: 29  SSLSKTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLI 88

Query: 116 TSYVRNELHDAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTK 175
            +  + +L   +I  + +M S G+ PD+   P++ K C E    + G ++H         
Sbjct: 89  YALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLD 148

Query: 176 WSLFVQNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSM 235
              FVQ ++  MY RCG +  AR +FD M ++D V+ ++++  YA K   +E   +   M
Sbjct: 149 MDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM 208

Query: 236 QSKCVEINVVTWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAI 295
           +S  +E N+V+WN I  G +R G    A+ +  ++ + G   D V +   L +      +
Sbjct: 209 ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEML 268

Query: 296 RLGKEIHGFTIRHYYHKLSTVQNALVTMYARCKDI------------------------- 355
            +G+ IHG+ I+    K   V +A++ MY +   +                         
Sbjct: 269 NMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328

Query: 356 ---------MHAYKLFRLND-DKSIITWNSMLSGLTHLDRVKDALHLFRELLQFGVEPNY 415
                    +  ++LF+    + ++++W S+++G     +  +AL LFRE+   GV+PN+
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNH 388

Query: 416 VTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWNALVDMYARSGKVLEAKRVFD 475
           VT  S+LP C  +A L HGR  H +   R    D + + +AL+DMYA+ G++  ++ VF+
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAV-RVHLLDNVHVGSALIDMYAKCGRINLSQIVFN 448

Query: 476 SLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKPDHITMVAVLSACSHSGLVKQ 535
            +  K+ V + SL+ G+ M G+  + + +F+ + R ++KPD I+  ++LSAC   GL  +
Sbjct: 449 MMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDE 508

Query: 536 GELLFAEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEIITRMPYRPTSAMWATLIGAC 595
           G   F  M   +G++P LEHY+CM +L GR G L +A ++I  MP+ P S +W  L+ +C
Sbjct: 509 GWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSC 568

Query: 596 CIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDSGVAKVPG 655
            +  N D+ E AAEKL  + PE+ G YVL++N+YAA G W+++  IR  M   G+ K PG
Sbjct: 569 RLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPG 628

Query: 656 CSWVDVGSEFVSFLVGDTSNPQALESKLLLDSLNDVMK 659
           CSW+ V +   + L GD S+PQ  +    +D ++  M+
Sbjct: 629 CSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMR 665

[Close]
BLAST of HG10003471 vs. ExPASy TrEMBL
Match: A0A6J1I8V4 (pentatricopeptide repeat-containing protein At1g71490 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472055 PE=4 SV=1)

HSP 1 Score: 1252.3 bits (3239), Expect = 0.0e+00
Identity = 612/676 (90.53%), Postives = 642/676 (94.97%), Query Frame = 0 

Query: 1   MIDSIFSSLKNFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTNCSSLPS 60
           MI+SIF SLK+FASHGQLSK FEAFSL+QLR SYNDSFDLI+QSISILLVSCT CSSLPS
Sbjct: 38  MINSIFYSLKSFASHGQLSKAFEAFSLVQLRRSYNDSFDLIVQSISILLVSCTTCSSLPS 97

Query: 61  GKQLHGHIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVR 120
           GKQLHG IISSGLEEDSILVPKLVTFYSSFKLL EAHTLVENSNLFHPCPWNLLITSYVR
Sbjct: 98  GKQLHGRIISSGLEEDSILVPKLVTFYSSFKLLAEAHTLVENSNLFHPCPWNLLITSYVR 157

Query: 121 NELHDAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTKWSLFV 180
           NELH++AILAYKQMLSKGVRPDNFTFPSILKACGETQNL FGLEVHK IN+WS +WSLFV
Sbjct: 158 NELHESAILAYKQMLSKGVRPDNFTFPSILKACGETQNLGFGLEVHKCINSWSNQWSLFV 217

Query: 181 QNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSMQSKCV 240
           QNALISMYGRCGE+DTARNLFDNML+RDAVSWNSMISCYASK MWKEAFELFD MQSKC+
Sbjct: 218 QNALISMYGRCGELDTARNLFDNMLDRDAVSWNSMISCYASKGMWKEAFELFDIMQSKCL 277

Query: 241 EINVVTWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKE 300
           EIN+VTWNIIAGGC R+G FTRALKLLSQMRNFGIHLD VAMIIGLGACSHIGAIRLGKE
Sbjct: 278 EINIVTWNIIAGGCLRLGKFTRALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKE 337

Query: 301 IHGFTIRHYYHKLSTVQNALVTMYARCKDIMHAYKLFRLNDDKSIITWNSMLSGLTHLDR 360
           IHGFTIRH YHK STVQNAL+TMYARCKDIM AY LFRLNDDKSIITWNSMLSGL+H+DR
Sbjct: 338 IHGFTIRHCYHKSSTVQNALLTMYARCKDIMRAYILFRLNDDKSIITWNSMLSGLSHVDR 397

Query: 361 VKDALHLFRELLQFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWN 420
           V+DAL LFRE L FGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDF+DYLLLWN
Sbjct: 398 VEDALRLFREFLLFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFQDYLLLWN 457

Query: 421 ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKP 480
           ALVDMYARSGKV+EAKRVFDSLSKKDEVTYTSLIAGYGMQGEG KALRLF+EMK   IKP
Sbjct: 458 ALVDMYARSGKVIEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGRKALRLFEEMKSVDIKP 517

Query: 481 DHITMVAVLSACSHSGLVKQGELLFAEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEI 540
           DHITMVAVLSACSHSGLVKQGE+LFAEMQS+HGL PHLEHYACMADLFGRVGLL++AKEI
Sbjct: 518 DHITMVAVLSACSHSGLVKQGEVLFAEMQSVHGLSPHLEHYACMADLFGRVGLLDRAKEI 577

Query: 541 ITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSW 600
           ITRMPYRPTSAMWATLIGACCIH NTDIGEWAAEKLLEM+PEHSGYYVLIANMYAAAGSW
Sbjct: 578 ITRMPYRPTSAMWATLIGACCIHRNTDIGEWAAEKLLEMKPEHSGYYVLIANMYAAAGSW 637

Query: 601 SKLAKIRTLMRDSGVAKVPGCSWVDVGSEFVSFLVGDTSNPQALESKLLLDSLNDVMKHG 660
           SKLAKIRTLMRD GVAK PGCSWV+VGSEFVSFLVGDTSNPQALESK LLD LNDVMKHG
Sbjct: 638 SKLAKIRTLMRDYGVAKAPGCSWVEVGSEFVSFLVGDTSNPQALESKHLLDDLNDVMKHG 697

Query: 661 SLMTTDSYDDIGDDIF 677
           +L+ TD Y DIG+D+F
Sbjct: 698 TLVMTDDY-DIGNDVF 712

[Close]
BLAST of HG10003471 vs. ExPASy TrEMBL
Match: A0A6J1EI84 (pentatricopeptide repeat-containing protein At1g71490 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432795 PE=4 SV=1)

HSP 1 Score: 1246.5 bits (3224), Expect = 0.0e+00
Identity = 611/676 (90.38%), Postives = 639/676 (94.53%), Query Frame = 0 

Query: 1   MIDSIFSSLKNFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTNCSSLPS 60
           MI SIF SLK+FASHGQLSK FEAFSL+QLR SYNDSFDLI+QSISILLVSCT CSSLPS
Sbjct: 38  MITSIFDSLKSFASHGQLSKAFEAFSLVQLRGSYNDSFDLIVQSISILLVSCTTCSSLPS 97

Query: 61  GKQLHGHIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVR 120
           GKQLHG IISSGLEEDSILVPKLVTFYSSFKLL EAHTLVENSNLFHPCPWNLLITSYVR
Sbjct: 98  GKQLHGRIISSGLEEDSILVPKLVTFYSSFKLLAEAHTLVENSNLFHPCPWNLLITSYVR 157

Query: 121 NELHDAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTKWSLFV 180
           NELH++AILAYKQMLSKGVRPDNFTFPSILKACGETQNL FGLEVHK IN+WS +WSLFV
Sbjct: 158 NELHESAILAYKQMLSKGVRPDNFTFPSILKACGETQNLGFGLEVHKCINSWSNQWSLFV 217

Query: 181 QNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSMQSKCV 240
           QNALISMYGRCGE+DTARNLFDNML+RDAVSWNSMISCYAS  MWKEAFELFD MQSKC+
Sbjct: 218 QNALISMYGRCGELDTARNLFDNMLDRDAVSWNSMISCYASNGMWKEAFELFDIMQSKCL 277

Query: 241 EINVVTWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKE 300
           EIN+VTWNIIAGGC R+G FT+ALKLLSQMRNFGIHLD VAMIIGLGACSHIGAIRLGKE
Sbjct: 278 EINIVTWNIIAGGCLRLGKFTQALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKE 337

Query: 301 IHGFTIRHYYHKLSTVQNALVTMYARCKDIMHAYKLFRLNDDKSIITWNSMLSGLTHLDR 360
           IHGFTIRH YHK STVQNAL+TMYARCKDIM AY LFRLNDDKSIITWNSMLSGL+H+DR
Sbjct: 338 IHGFTIRHCYHKSSTVQNALLTMYARCKDIMRAYILFRLNDDKSIITWNSMLSGLSHVDR 397

Query: 361 VKDALHLFRELLQFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWN 420
           V+DAL LFRELL +GVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDF+DYLLLWN
Sbjct: 398 VEDALRLFRELLLYGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFQDYLLLWN 457

Query: 421 ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKP 480
           ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEG KALRLF+EMK   IKP
Sbjct: 458 ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGRKALRLFEEMKSVDIKP 517

Query: 481 DHITMVAVLSACSHSGLVKQGELLFAEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEI 540
           DHITMVAVLSACSHSGLVKQGE+LFAEMQS+HGL P LEHYACMADLFGRVGLL++AKEI
Sbjct: 518 DHITMVAVLSACSHSGLVKQGEVLFAEMQSVHGLSPRLEHYACMADLFGRVGLLDRAKEI 577

Query: 541 ITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSW 600
           ITRMPYRPTSAMWATLIGACCIH NTDIGEWAAEKLLEM+PEHSGYYVLIANMYAAAGSW
Sbjct: 578 ITRMPYRPTSAMWATLIGACCIHRNTDIGEWAAEKLLEMKPEHSGYYVLIANMYAAAGSW 637

Query: 601 SKLAKIRTLMRDSGVAKVPGCSWVDVGSEFVSFLVGDTSNPQALESKLLLDSLNDVMKHG 660
           SKLAKIRTLMRD GVAK PGCSWV+VGSEFVSFLVGDTSNPQALESK LLD LNDVMKHG
Sbjct: 638 SKLAKIRTLMRDYGVAKAPGCSWVEVGSEFVSFLVGDTSNPQALESKHLLDGLNDVMKHG 697

Query: 661 SLMTTDSYDDIGDDIF 677
           +L+  D Y DIGDDIF
Sbjct: 698 TLVMIDDY-DIGDDIF 712

[Close]
BLAST of HG10003471 vs. ExPASy TrEMBL
Match: A0A6J1CJU8 (pentatricopeptide repeat-containing protein At1g71490-like OS=Momordica charantia OX=3673 GN=LOC111012088 PE=4 SV=1)

HSP 1 Score: 1232.6 bits (3188), Expect = 0.0e+00
Identity = 605/676 (89.50%), Postives = 634/676 (93.79%), Query Frame = 0 

Query: 1   MIDSIFSSLKNFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTNCSSLPS 60
           MI  +FSSLK+FA HGQLSK FEAFSLIQLRT YNDSFDLILQS SILLVSCTN SSLP 
Sbjct: 38  MIGPVFSSLKSFACHGQLSKAFEAFSLIQLRTGYNDSFDLILQSFSILLVSCTNASSLPP 97

Query: 61  GKQLHGHIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVR 120
           G+QLHG II SGLE+DSILVPKLVTFYSSFKLL EAHTLVENSN+FHPCPWNLLITSYVR
Sbjct: 98  GRQLHGRIILSGLEQDSILVPKLVTFYSSFKLLAEAHTLVENSNIFHPCPWNLLITSYVR 157

Query: 121 NELHDAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTKWSLFV 180
           N LH+AAIL YKQMLS+G+RPDNFTFPSILKACGETQNL FGLEVHK INAWST+WSLFV
Sbjct: 158 NGLHEAAILVYKQMLSRGIRPDNFTFPSILKACGETQNLGFGLEVHKYINAWSTEWSLFV 217

Query: 181 QNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSMQSKCV 240
           QNALISMYGRCGEVDTARNLFDNML+RDAVSWNSMISCYASK MWKEAFELFD+MQSKC+
Sbjct: 218 QNALISMYGRCGEVDTARNLFDNMLDRDAVSWNSMISCYASKGMWKEAFELFDNMQSKCI 277

Query: 241 EINVVTWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKE 300
           EIN+VTWNIIAGGC RVGNF  ALKLLSQMRNFG HLD VAMIIGLGACSHIGAIRLGKE
Sbjct: 278 EINIVTWNIIAGGCLRVGNFVGALKLLSQMRNFGAHLDYVAMIIGLGACSHIGAIRLGKE 337

Query: 301 IHGFTIRHYYHKLSTVQNALVTMYARCKDIMHAYKLFRLNDDKSIITWNSMLSGLTHLDR 360
           IHGFTIRH YH+LS VQNALVTMYARCKDIM+AY LFRLN DKSIITWNSMLSG THLDR
Sbjct: 338 IHGFTIRHCYHRLSIVQNALVTMYARCKDIMNAYILFRLNSDKSIITWNSMLSGYTHLDR 397

Query: 361 VKDALHLFRELLQFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWN 420
           V++AL LFRELL  GVEPNYVT ASILPLCARVADLQHGREFHCYITKR+D  DYLLLWN
Sbjct: 398 VEEALFLFRELLLSGVEPNYVTIASILPLCARVADLQHGREFHCYITKREDLGDYLLLWN 457

Query: 421 ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKP 480
           ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEG KALRLF+EMKRFQIKP
Sbjct: 458 ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGSKALRLFQEMKRFQIKP 517

Query: 481 DHITMVAVLSACSHSGLVKQGELLFAEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEI 540
           DHITMVAVLSACSHSGL+KQGELLFAEMQS+HGL PHLEHYACMADLFGRVGLLNKAK I
Sbjct: 518 DHITMVAVLSACSHSGLLKQGELLFAEMQSVHGLSPHLEHYACMADLFGRVGLLNKAKGI 577

Query: 541 ITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSW 600
           ITRMPYRPTSAMWATLIGACCIHGNT+IGEWAAEKLLEM+PEHSGYYVLIANMYAAAGSW
Sbjct: 578 ITRMPYRPTSAMWATLIGACCIHGNTNIGEWAAEKLLEMQPEHSGYYVLIANMYAAAGSW 637

Query: 601 SKLAKIRTLMRDSGVAKVPGCSWVDVGSEFVSFLVGDTSNPQALESKLLLDSLNDVMKHG 660
           SKLAKIRTLMRDSGVAK PGCSWVDVGS FVSFLVGDTSNPQALE+ LLLD+LN+VMKHG
Sbjct: 638 SKLAKIRTLMRDSGVAKAPGCSWVDVGSGFVSFLVGDTSNPQALEANLLLDNLNNVMKHG 697

Query: 661 SLMTTDSYDDIGDDIF 677
           SL+T DS+ DI +D F
Sbjct: 698 SLVTKDSH-DIDNDSF 712

[Close]
BLAST of HG10003471 vs. ExPASy TrEMBL
Match: A0A1S3CB12 (pentatricopeptide repeat-containing protein At1g71490 OS=Cucumis melo OX=3656 GN=LOC103498667 PE=4 SV=1)

HSP 1 Score: 1231.5 bits (3185), Expect = 0.0e+00
Identity = 609/676 (90.09%), Postives = 637/676 (94.23%), Query Frame = 0 

Query: 1   MIDSIFSSLKNFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTNCSSLPS 60
           MI SIFSSLK+FASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCT CSSLP 
Sbjct: 38  MIGSIFSSLKDFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTKCSSLPP 97

Query: 61  GKQLHGHIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVR 120
           GKQLHGHIISSGL EDS LV KLV FYSS + LPEAHTLVE SNLF PC WN+L+TSYVR
Sbjct: 98  GKQLHGHIISSGLVEDSFLVSKLVMFYSSLECLPEAHTLVETSNLFRPCSWNILMTSYVR 157

Query: 121 NELHDAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTKWSLFV 180
           N+L++AAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINA ST WSLFV
Sbjct: 158 NKLYEAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINACSTNWSLFV 217

Query: 181 QNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSMQSKCV 240
            NALISMYGRCGEVDTAR LFD MLERD VSWNSMISCY+S+ MW+EAFELF+SMQSK +
Sbjct: 218 HNALISMYGRCGEVDTARYLFDIMLERDGVSWNSMISCYSSRGMWREAFELFESMQSKSL 277

Query: 241 EINVVTWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKE 300
           EINVVTWNIIAGGC RVGNFTRAL LLSQMRNFGIHLD VAMIIGLGACSHIGAIRLGKE
Sbjct: 278 EINVVTWNIIAGGCLRVGNFTRALNLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKE 337

Query: 301 IHGFTIRHYYHKLSTVQNALVTMYARCKDIMHAYKLFRLNDDKSIITWNSMLSGLTHLDR 360
           IHGFTIRHY+H LSTVQNALVTMYARCKDI HAY LFRLNDDKSIITWNSMLSGLTHLDR
Sbjct: 338 IHGFTIRHYHHMLSTVQNALVTMYARCKDIRHAYMLFRLNDDKSIITWNSMLSGLTHLDR 397

Query: 361 VKDALHLFRELLQFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWN 420
           V+DAL LFRELL FGVEPNYVTFASILPLCARVA+LQHGREFHCYITKR DFRD+LLLWN
Sbjct: 398 VEDALCLFRELLLFGVEPNYVTFASILPLCARVANLQHGREFHCYITKRHDFRDHLLLWN 457

Query: 421 ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKP 480
           ALVDMYARSGKV EAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLF+EMKRFQIKP
Sbjct: 458 ALVDMYARSGKVSEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFEEMKRFQIKP 517

Query: 481 DHITMVAVLSACSHSGLVKQGELLFAEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEI 540
           DHITMVAVLSACSHSGL+ QGELLFAEMQS+HGL P LEHY+CMADLFGRVGLLNKAKEI
Sbjct: 518 DHITMVAVLSACSHSGLLNQGELLFAEMQSVHGLSPRLEHYSCMADLFGRVGLLNKAKEI 577

Query: 541 ITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSW 600
           ITRMPYRPTSA+WATLIGACCIHGNTDIGEWAAEKLLEM+PEHSGYYVLIANMYAAAGSW
Sbjct: 578 ITRMPYRPTSAIWATLIGACCIHGNTDIGEWAAEKLLEMQPEHSGYYVLIANMYAAAGSW 637

Query: 601 SKLAKIRTLMRDSGVAKVPGCSWVDVGSEFVSFLVGDTSNPQALESKLLLDSLNDVMKHG 660
           SKLA+IRT MRDSGVAKVPGCSWVDVGSEFVSF VGDTS+PQALESKLLLDSL DV+KH 
Sbjct: 638 SKLAEIRTRMRDSGVAKVPGCSWVDVGSEFVSFSVGDTSSPQALESKLLLDSLYDVIKHD 697

Query: 661 SLMTTDSYDDIGDDIF 677
           SL+TTD+Y D GD+IF
Sbjct: 698 SLITTDNY-DTGDNIF 712

[Close]
BLAST of HG10003471 vs. ExPASy TrEMBL
Match: A0A5D3BN10 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00830 PE=4 SV=1)

HSP 1 Score: 1231.5 bits (3185), Expect = 0.0e+00
Identity = 609/676 (90.09%), Postives = 637/676 (94.23%), Query Frame = 0 

Query: 1   MIDSIFSSLKNFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTNCSSLPS 60
           MI SIFSSLK+FASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCT CSSLP 
Sbjct: 38  MIGSIFSSLKDFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTKCSSLPP 97

Query: 61  GKQLHGHIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVR 120
           GKQLHGHIISSGL EDS LV KLV FYSS + LPEAHTLVE SNLF PC WN+L+TSYVR
Sbjct: 98  GKQLHGHIISSGLVEDSFLVSKLVMFYSSLECLPEAHTLVETSNLFRPCSWNILMTSYVR 157

Query: 121 NELHDAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTKWSLFV 180
           N+L++AAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINA ST WSLFV
Sbjct: 158 NKLYEAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINACSTNWSLFV 217

Query: 181 QNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSMQSKCV 240
            NALISMYGRCGEVDTAR LFD MLERD VSWNSMISCY+S+ MW+EAFELF+SMQSK +
Sbjct: 218 HNALISMYGRCGEVDTARYLFDIMLERDGVSWNSMISCYSSRGMWREAFELFESMQSKSL 277

Query: 241 EINVVTWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKE 300
           EINVVTWNIIAGGC RVGNFTRAL LLSQMRNFGIHLD VAMIIGLGACSHIGAIRLGKE
Sbjct: 278 EINVVTWNIIAGGCLRVGNFTRALNLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKE 337

Query: 301 IHGFTIRHYYHKLSTVQNALVTMYARCKDIMHAYKLFRLNDDKSIITWNSMLSGLTHLDR 360
           IHGFTIRHY+H LSTVQNALVTMYARCKDI HAY LFRLNDDKSIITWNSMLSGLTHLDR
Sbjct: 338 IHGFTIRHYHHMLSTVQNALVTMYARCKDIRHAYMLFRLNDDKSIITWNSMLSGLTHLDR 397

Query: 361 VKDALHLFRELLQFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWN 420
           V+DAL LFRELL FGVEPNYVTFASILPLCARVA+LQHGREFHCYITKR DFRD+LLLWN
Sbjct: 398 VEDALCLFRELLLFGVEPNYVTFASILPLCARVANLQHGREFHCYITKRHDFRDHLLLWN 457

Query: 421 ALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKP 480
           ALVDMYARSGKV EAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLF+EMKRFQIKP
Sbjct: 458 ALVDMYARSGKVSEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFEEMKRFQIKP 517

Query: 481 DHITMVAVLSACSHSGLVKQGELLFAEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEI 540
           DHITMVAVLSACSHSGL+ QGELLFAEMQS+HGL P LEHY+CMADLFGRVGLLNKAKEI
Sbjct: 518 DHITMVAVLSACSHSGLLNQGELLFAEMQSVHGLSPRLEHYSCMADLFGRVGLLNKAKEI 577

Query: 541 ITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSW 600
           ITRMPYRPTSA+WATLIGACCIHGNTDIGEWAAEKLLEM+PEHSGYYVLIANMYAAAGSW
Sbjct: 578 ITRMPYRPTSAIWATLIGACCIHGNTDIGEWAAEKLLEMQPEHSGYYVLIANMYAAAGSW 637

Query: 601 SKLAKIRTLMRDSGVAKVPGCSWVDVGSEFVSFLVGDTSNPQALESKLLLDSLNDVMKHG 660
           SKLA+IRT MRDSGVAKVPGCSWVDVGSEFVSF VGDTS+PQALESKLLLDSL DV+KH 
Sbjct: 638 SKLAEIRTRMRDSGVAKVPGCSWVDVGSEFVSFSVGDTSSPQALESKLLLDSLYDVIKHD 697

Query: 661 SLMTTDSYDDIGDDIF 677
           SL+TTD+Y D GD+IF
Sbjct: 698 SLITTDNY-DTGDNIF 712

[Close]
BLAST of HG10003471 vs. TAIR 10
Match: AT1G71490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 828.9 bits (2140), Expect = 2.9e-240
Identity = 397/656 (60.52%), Postives = 504/656 (76.83%), Query Frame = 0 

Query: 3   DSIFSSLKNFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTNCSSLPSGK 62
           +S+F SL + ASHG L   F+ FSL++L++S   S DL+L S + LL +C +  +  +G 
Sbjct: 4   ESLFKSLGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGV 63

Query: 63  QLHGHIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVRNE 122
           Q+H H ISSG+E  S+LVPKLVTFYS+F L  EA +++ENS++ HP PWN+LI SY +NE
Sbjct: 64  QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNE 123

Query: 123 LHDAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTKWSLFVQN 182
           L +  I AYK+M+SKG+RPD FT+PS+LKACGET ++ FG  VH SI   S K SL+V N
Sbjct: 124 LFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCN 183

Query: 183 ALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSMQSKCVEI 242
           ALISMY R   +  AR LFD M ERDAVSWN++I+CYAS+ MW EAFELFD M    VE+
Sbjct: 184 ALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEV 243

Query: 243 NVVTWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKEIH 302
           +V+TWNII+GGC + GN+  AL L+S+MRNF   LD VAMIIGL ACS IGAIRLGKEIH
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIH 303

Query: 303 GFTIRHYYHKLSTVQNALVTMYARCKDIMHAYKLFRLNDDKSIITWNSMLSGLTHLDRVK 362
           G  I   Y  +  V+N L+TMY++CKD+ HA  +FR  ++ S+ TWNS++SG   L++ +
Sbjct: 304 GLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSE 363

Query: 363 DALHLFRELLQFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWNAL 422
           +A HL RE+L  G +PN +T ASILPLCAR+A+LQHG+EFHCYI +R+ F+DY +LWN+L
Sbjct: 364 EASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSL 423

Query: 423 VDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKPDH 482
           VD+YA+SGK++ AK+V D +SK+DEVTYTSLI GYG QGEGG AL LFKEM R  IKPDH
Sbjct: 424 VDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDH 483

Query: 483 ITMVAVLSACSHSGLVKQGELLFAEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEIIT 542
           +T+VAVLSACSHS LV +GE LF +MQ  +G+RP L+H++CM DL+GR G L KAK+II 
Sbjct: 484 VTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIH 543

Query: 543 RMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSK 602
            MPY+P+ A WATL+ AC IHGNT IG+WAAEKLLEM+PE+ GYYVLIANMYAAAGSWSK
Sbjct: 544 NMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSK 603

Query: 603 LAKIRTLMRDSGVAKVPGCSWVDVGSEFVSFLVGDTSNPQALESKLLLDSLNDVMK 659
           LA++RT+MRD GV K PGC+W+D  S F  F VGDTS+P+A  +  LLD LN +MK
Sbjct: 604 LAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMK 659

[Close]
BLAST of HG10003471 vs. TAIR 10
Match: AT1G22830.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 688.7 bits (1776), Expect = 4.6e-198
Identity = 338/654 (51.68%), Postives = 459/654 (70.18%), Query Frame = 0 

Query: 5   IFSSLKNFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTNCSSLPSGKQL 64
           +F+S ++  SHGQL + F  FSL++ ++    S + +L S + LL +C   +    G+QL
Sbjct: 49  LFNSFRHCISHGQLYEAFRTFSLLRYQSG---SHEFVLYSSASLLSTCVGFNEFVPGQQL 108

Query: 65  HGHIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVRNELH 124
           H H ISSGLE DS+LVPKLVTFYS+F LL EA T+ ENS + HP PWN+LI SY+RN+  
Sbjct: 109 HAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRF 168

Query: 125 DAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTKWSLFVQNAL 184
             ++  YK+M+SKG+R D FT+PS++KAC    +  +G  VH SI   S + +L+V NAL
Sbjct: 169 QESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNAL 228

Query: 185 ISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSMQSKCVEINV 244
           ISMY R G+VD AR LFD M ERDAVSWN++I+CY S+    EAF+L D M    VE ++
Sbjct: 229 ISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASI 288

Query: 245 VTWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKEIHGF 304
           VTWN IAGGC   GN+  AL  +  MRN  + + SVAMI GL ACSHIGA++ GK  H  
Sbjct: 289 VTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCL 348

Query: 305 TIR--HYYHKLSTVQNALVTMYARCKDIMHAYKLFRLNDDKSIITWNSMLSGLTHLDRVK 364
            IR   + H +  V+N+L+TMY+RC D+ HA+ +F+  +  S+ TWNS++SG  + +R +
Sbjct: 349 VIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSE 408

Query: 365 DALHLFRELLQFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWNAL 424
           +   L +E+L  G  PN++T ASILPL ARV +LQHG+EFHCYI +RQ ++D L+LWN+L
Sbjct: 409 ETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 468

Query: 425 VDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKPDH 484
           VDMYA+SG+++ AKRVFDS+ K+D+VTYTSLI GYG  G+G  AL  FK+M R  IKPDH
Sbjct: 469 VDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDH 528

Query: 485 ITMVAVLSACSHSGLVKQGELLFAEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEIIT 544
           +TMVAVLSACSHS LV++G  LF +M+ + G+R  LEHY+CM DL+ R G L+KA++I  
Sbjct: 529 VTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFH 588

Query: 545 RMPYRPTSAMWATLIGACCIHGNTDIGEWAAEK-LLEMRPEHSGYYVLIANMYAAAGSWS 604
            +PY P+SAM ATL+ AC IHGNT+IGEWAA+K LLE +PEH G+Y+L+A+MYA  GSWS
Sbjct: 589 TIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 648

Query: 605 KLAKIRTLMRDSGVAKVPGCSWVDVGSEFVSFLVGDTSNPQALESKLLLDSLND 656
           KL  ++TL+ D GV K    + ++  SE    L G+ + P   +S +  +  +D
Sbjct: 649 KLVTVKTLLSDLGVQKAHEFALMETDSE----LDGENNKPMNDDSVINQEQSSD 695

[Close]
BLAST of HG10003471 vs. TAIR 10
Match: AT1G22830.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 688.7 bits (1776), Expect = 4.6e-198
Identity = 338/654 (51.68%), Postives = 459/654 (70.18%), Query Frame = 0 

Query: 5   IFSSLKNFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTNCSSLPSGKQL 64
           +F+S ++  SHGQL + F  FSL++ ++    S + +L S + LL +C   +    G+QL
Sbjct: 49  LFNSFRHCISHGQLYEAFRTFSLLRYQSG---SHEFVLYSSASLLSTCVGFNEFVPGQQL 108

Query: 65  HGHIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVRNELH 124
           H H ISSGLE DS+LVPKLVTFYS+F LL EA T+ ENS + HP PWN+LI SY+RN+  
Sbjct: 109 HAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRF 168

Query: 125 DAAILAYKQMLSKGVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTKWSLFVQNAL 184
             ++  YK+M+SKG+R D FT+PS++KAC    +  +G  VH SI   S + +L+V NAL
Sbjct: 169 QESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNAL 228

Query: 185 ISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSMQSKCVEINV 244
           ISMY R G+VD AR LFD M ERDAVSWN++I+CY S+    EAF+L D M    VE ++
Sbjct: 229 ISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASI 288

Query: 245 VTWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKEIHGF 304
           VTWN IAGGC   GN+  AL  +  MRN  + + SVAMI GL ACSHIGA++ GK  H  
Sbjct: 289 VTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCL 348

Query: 305 TIR--HYYHKLSTVQNALVTMYARCKDIMHAYKLFRLNDDKSIITWNSMLSGLTHLDRVK 364
            IR   + H +  V+N+L+TMY+RC D+ HA+ +F+  +  S+ TWNS++SG  + +R +
Sbjct: 349 VIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSE 408

Query: 365 DALHLFRELLQFGVEPNYVTFASILPLCARVADLQHGREFHCYITKRQDFRDYLLLWNAL 424
           +   L +E+L  G  PN++T ASILPL ARV +LQHG+EFHCYI +RQ ++D L+LWN+L
Sbjct: 409 ETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 468

Query: 425 VDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKPDH 484
           VDMYA+SG+++ AKRVFDS+ K+D+VTYTSLI GYG  G+G  AL  FK+M R  IKPDH
Sbjct: 469 VDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDH 528

Query: 485 ITMVAVLSACSHSGLVKQGELLFAEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEIIT 544
           +TMVAVLSACSHS LV++G  LF +M+ + G+R  LEHY+CM DL+ R G L+KA++I  
Sbjct: 529 VTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFH 588

Query: 545 RMPYRPTSAMWATLIGACCIHGNTDIGEWAAEK-LLEMRPEHSGYYVLIANMYAAAGSWS 604
            +PY P+SAM ATL+ AC IHGNT+IGEWAA+K LLE +PEH G+Y+L+A+MYA  GSWS
Sbjct: 589 TIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 648

Query: 605 KLAKIRTLMRDSGVAKVPGCSWVDVGSEFVSFLVGDTSNPQALESKLLLDSLND 656
           KL  ++TL+ D GV K    + ++  SE    L G+ + P   +S +  +  +D
Sbjct: 649 KLVTVKTLLSDLGVQKAHEFALMETDSE----LDGENNKPMNDDSVINQEQSSD 695

[Close]
BLAST of HG10003471 vs. TAIR 10
Match: AT5G16860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 422.9 bits (1086), Expect = 4.7e-118
Identity = 229/682 (33.58%), Postives = 370/682 (54.25%), Query Frame = 0 

Query: 7   SSLKNFASHGQLSKTFEAFSLIQLRTSYNDSFDLILQSISILLVSCTNCSSLPSGKQLHG 66
           S ++++  +G  +K    F L+   +   D++     +   +  +C   SS+  G+  H 
Sbjct: 97  SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNY-----TFPFVFKACGEISSVRCGESAHA 156

Query: 67  HIISSGLEEDSILVPKLVTFYSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVRNELHDA 126
             + +G   +  +   LV  YS  + L +A  + +  +++    WN +I SY +      
Sbjct: 157 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 216

Query: 127 AILAYKQMLSK-GVRPDNFTFPSILKACGETQNLEFGLEVHKSINAWSTKWSLFVQNALI 186
           A+  + +M ++ G RPDN T  ++L  C        G ++H          ++FV N L+
Sbjct: 217 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 276

Query: 187 SMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYASKAMWKEAFELFDSMQSKCVEINVV 246
            MY +CG +D A  +F NM  +D VSWN+M++ Y+    +++A  LF+ MQ + ++++VV
Sbjct: 277 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 336

Query: 247 TWNIIAGGCSRVGNFTRALKLLSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKEIHGFT 306
           TW+    G ++ G    AL +  QM + GI  + V +I  L  C+ +GA+  GKEIH + 
Sbjct: 337 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 396

Query: 307 IRH-------YYHKLSTVQNALVTMYARCKDIMHAYKLF--RLNDDKSIITWNSMLSGLT 366
           I++        +   + V N L+ MYA+CK +  A  +F      ++ ++TW  M+ G +
Sbjct: 397 IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 456

Query: 367 HLDRVKDALHLFRELLQFGVE--PNYVTFASILPLCARVADLQHGREFHCYITKRQDFRD 426
                  AL L  E+ +   +  PN  T +  L  CA +A L+ G++ H Y  + Q    
Sbjct: 457 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 516

Query: 427 YLLLWNALVDMYARSGKVLEAKRVFDSLSKKDEVTYTSLIAGYGMQGEGGKALRLFKEMK 486
            L + N L+DMYA+ G + +A+ VFD++  K+EVT+TSL+ GYGM G G +AL +F EM+
Sbjct: 517 PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 576

Query: 487 RFQIKPDHITMVAVLSACSHSGLVKQGELLFAEMQSLHGLRPHLEHYACMADLFGRVGLL 546
           R   K D +T++ VL ACSHSG++ QG   F  M+++ G+ P  EHYAC+ DL GR G L
Sbjct: 577 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 636

Query: 547 NKAKEIITRMPYRPTSAMWATLIGACCIHGNTDIGEWAAEKLLEMRPEHSGYYVLIANMY 606
           N A  +I  MP  P   +W   +  C IHG  ++GE+AAEK+ E+   H G Y L++N+Y
Sbjct: 637 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 696

Query: 607 AAAGSWSKLAKIRTLMRDSGVAKVPGCSWVDVGSEFVSFLVGDTSNPQALE-SKLLLDSL 666
           A AG W  + +IR+LMR  GV K PGCSWV+      +F VGD ++P A E  ++LLD +
Sbjct: 697 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHM 756

Query: 667 NDVMKHGSLMTTD-SYDDIGDD 675
             +   G +  T  +  D+ D+
Sbjct: 757 QRIKDIGYVPETGFALHDVDDE 773

[Close]
BLAST of HG10003471 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 418.7 bits (1075), Expect = 8.9e-117
Identity = 219/642 (34.11%), Postives = 364/642 (56.70%), Query Frame = 0 

Query: 30  LRTSYNDSFDLILQSISILLVSCTNCSSLPSGKQLHGHIISSGLEEDSILVPKLVTF--- 89
           L +S +  +D I    S+ L+   NC +L S + +H  +I  GL   +  + KL+ F   
Sbjct: 20  LPSSSDPPYDSIRNHPSLSLLH--NCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCIL 79

Query: 90  YSSFKLLPEAHTLVENSNLFHPCPWNLLITSYVRNELHDAAILAYKQMLSKGVRPDNFTF 149
              F+ LP A ++ +     +   WN +   +  +    +A+  Y  M+S G+ P+++TF
Sbjct: 80  SPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTF 139

Query: 150 PSILKACGETQNLEFGLEVHKSINAWSTKWSLFVQNALISMYGRCGEVDTARNLFDNMLE 209
           P +LK+C +++  + G ++H  +        L+V  +LISMY + G ++ A  +FD    
Sbjct: 140 PFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPH 199

Query: 210 RDAVSWNSMISCYASKAMWKEAFELFDSMQSKCVEINVVTWNIIAGGCSRVGNFTRALKL 269
           RD VS+ ++I  YAS+   + A +LFD +  K    +VV+WN +  G +  GN+  AL+L
Sbjct: 200 RDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALEL 259

Query: 270 LSQMRNFGIHLDSVAMIIGLGACSHIGAIRLGKEIHGFTIRHYYHKLSTVQNALVTMYAR 329
              M    +  D   M+  + AC+  G+I LG+++H +   H +     + NAL+ +Y++
Sbjct: 260 FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 319

Query: 330 CKDIMHAYKLFRLNDDKSIITWNSMLSGLTHLDRVKDALHLFRELLQFGVEPNYVTFASI 389
           C ++  A  LF     K +I+WN+++ G TH++  K+AL LF+E+L+ G  PN VT  SI
Sbjct: 320 CGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 379

Query: 390 LPLCARVADLQHGREFHCYITKR-QDFRDYLLLWNALVDMYARSGKVLEAKRVFDSLSKK 449
           LP CA +  +  GR  H YI KR +   +   L  +L+DMYA+ G +  A +VF+S+  K
Sbjct: 380 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 439

Query: 450 DEVTYTSLIAGYGMQGEGGKALRLFKEMKRFQIKPDHITMVAVLSACSHSGLVKQGELLF 509
              ++ ++I G+ M G    +  LF  M++  I+PD IT V +LSACSHSG++  G  +F
Sbjct: 440 SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIF 499

Query: 510 AEMQSLHGLRPHLEHYACMADLFGRVGLLNKAKEIITRMPYRPTSAMWATLIGACCIHGN 569
             M   + + P LEHY CM DL G  GL  +A+E+I  M   P   +W +L+ AC +HGN
Sbjct: 500 RTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGN 559

Query: 570 TDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSKLAKIRTLMRDSGVAKVPGCSWVD 629
            ++GE  AE L+++ PE+ G YVL++N+YA+AG W+++AK R L+ D G+ KVPGCS ++
Sbjct: 560 VELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIE 619

Query: 630 VGSEFVSFLVGDTSNPQALESKLLLDSLNDVMKHGSLMTTDS 668
           + S    F++GD  +P+  E   +L+ +  +++    +   S
Sbjct: 620 IDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTS 655

The following BLAST results are available for this feature:
BLAST of HG10003471 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038890628.10.0e+0094.68pentatricopeptide repeat-containing protein At1g71490 [Benincasa hispida] >XP_03... [more]
XP_022973516.10.0e+0090.53pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita maxi... [more]
KAG7025166.10.0e+0090.53Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022925519.10.0e+0090.38pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita mosc... [more]
XP_023535485.10.0e+0090.53pentatricopeptide repeat-containing protein At1g71490 isoform X1 [Cucurbita pepo... [more]
BLAST of HG10003471 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C9I64.0e-23960.52Pentatricopeptide repeat-containing protein At1g71490 OS=Arabidopsis thaliana OX... [more]
Q4V3896.5e-19751.68Pentatricopeptide repeat-containing protein At1g22830 OS=Arabidopsis thaliana OX... [more]
Q9LFL56.7e-11733.58Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX... [more]
Q9LN011.3e-11534.11Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Q9LNU63.2e-10330.56Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX... [more]
BLAST of HG10003471 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I8V40.0e+0090.53pentatricopeptide repeat-containing protein At1g71490 isoform X1 OS=Cucurbita ma... [more]
A0A6J1EI840.0e+0090.38pentatricopeptide repeat-containing protein At1g71490 isoform X1 OS=Cucurbita mo... [more]
A0A6J1CJU80.0e+0089.50pentatricopeptide repeat-containing protein At1g71490-like OS=Momordica charanti... [more]
A0A1S3CB120.0e+0090.09pentatricopeptide repeat-containing protein At1g71490 OS=Cucumis melo OX=3656 GN... [more]
A0A5D3BN100.0e+0090.09Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
BLAST of HG10003471 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G71490.12.9e-24060.52Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G22830.14.6e-19851.68Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G22830.24.6e-19851.68Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G16860.14.7e-11833.58Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G08070.18.9e-11734.11Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 182..207
e-value: 3.5E-4
score: 20.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 445..493
e-value: 8.9E-11
score: 41.8
coord: 111..153
e-value: 5.0E-8
score: 33.0
coord: 344..389
e-value: 2.5E-8
score: 34.0
coord: 208..255
e-value: 3.1E-12
score: 46.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 346..379
e-value: 8.2E-7
score: 26.8
coord: 419..445
e-value: 5.5E-4
score: 17.9
coord: 111..142
e-value: 1.6E-5
score: 22.7
coord: 448..481
e-value: 1.6E-8
score: 32.2
coord: 180..208
e-value: 7.6E-5
score: 20.6
coord: 245..278
e-value: 2.9E-6
score: 25.1
coord: 210..243
e-value: 4.3E-8
score: 30.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 177..207
score: 9.076014
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 208..242
score: 11.542307
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 446..480
score: 12.254791
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 344..378
score: 11.783455
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 243..277
score: 11.038087
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 107..141
score: 9.777537
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 158..304
e-value: 2.0E-31
score: 110.8
coord: 305..399
e-value: 7.4E-16
score: 60.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 5..157
e-value: 8.5E-13
score: 50.4
coord: 409..633
e-value: 1.6E-38
score: 134.8
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 1..663
NoneNo IPR availablePANTHERPTHR47924:SF43PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 1..663

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10003471.1HG10003471.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0005515 protein binding