HG10003456 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTTTGTTTGGTGAGAAAATGAGAGAAAATTGGTGGGTTGTTTATAGAAAAGAGGTGAAGAAAGTGAGCTTCATAGCAGCTCCAATGGCTGCCAGCGCCACTTTGCAATATGGAATGCAAATTGTTGCAGTGATTATGGTTGGACATCTTGGAGATGAGCTTTTGCTTTCTGGAGTTTCCATTGCTTCATCCGTCATCAATGTCACTGGATGTAGTGTTCTTGTAAGTCCTTTTCTTTTTAATAGTTCCTTCTTAGTTTATATCATTTTAAATGTGTAA ATGTGTTTGTTTGGTGAGAAAATGAGAGAAAATTGGTGGGTTGTTTATAGAAAAGAGGTGAAGAAAGTGAGCTTCATAGCAGCTCCAATGGCTGCCAGCGCCACTTTGCAATATGGAATGCAAATTGTTGCAGTGATTATGGTTGGACATCTTGGAGATGAGCTTTTGCTTTCTGGAGTTTCCATTGCTTCATCCGTCATCAATGTCACTGGATGTAGTGTTCTTGTAAGTCCTTTTCTTTTTAATAGTTCCTTCTTAGTTTATATCATTTTAAATGTGTAA ATGTGTTTGTTTGGTGAGAAAATGAGAGAAAATTGGTGGGTTGTTTATAGAAAAGAGGTGAAGAAAGTGAGCTTCATAGCAGCTCCAATGGCTGCCAGCGCCACTTTGCAATATGGAATGCAAATTGTTGCAGTGATTATGGTTGGACATCTTGGAGATGAGCTTTTGCTTTCTGGAGTTTCCATTGCTTCATCCGTCATCAATGTCACTGGATGTAGTGTTCTTGTAAGTCCTTTTCTTTTTAATAGTTCCTTCTTAGTTTATATCATTTTAAATGTGTAA MCLFGEKMRENWWVVYRKEVKKVSFIAAPMAASATLQYGMQIVAVIMVGHLGDELLLSGVSIASSVINVTGCSVLVSPFLFNSSFLVYIILNV Homology
BLAST of HG10003456 vs. NCBI nr
Match: XP_038889425.1 (protein DETOXIFICATION 3-like isoform X1 [Benincasa hispida]) HSP 1 Score: 131.0 bits (328), Expect = 5.5e-27 Identity = 68/76 (89.47%), Postives = 72/76 (94.74%), Query Frame = 0
BLAST of HG10003456 vs. NCBI nr
Match: KAA0039279.1 (protein DETOXIFICATION 12-like isoform X3 [Cucumis melo var. makuwa] >TYK00464.1 protein DETOXIFICATION 12-like isoform X3 [Cucumis melo var. makuwa]) HSP 1 Score: 107.5 bits (267), Expect = 6.5e-20 Identity = 61/81 (75.31%), Postives = 66/81 (81.48%), Query Frame = 0
BLAST of HG10003456 vs. NCBI nr
Match: XP_004141549.1 (protein DETOXIFICATION 12 isoform X2 [Cucumis sativus]) HSP 1 Score: 105.5 bits (262), Expect = 2.5e-19 Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 0
BLAST of HG10003456 vs. NCBI nr
Match: XP_022925515.1 (protein DETOXIFICATION 3-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 104.0 bits (258), Expect = 7.2e-19 Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 0
BLAST of HG10003456 vs. NCBI nr
Match: XP_022141870.1 (protein DETOXIFICATION 3-like isoform X4 [Momordica charantia]) HSP 1 Score: 103.6 bits (257), Expect = 9.4e-19 Identity = 56/69 (81.16%), Postives = 61/69 (88.41%), Query Frame = 0
BLAST of HG10003456 vs. ExPASy Swiss-Prot
Match: F4HQ05 (Protein DETOXIFICATION 8 OS=Arabidopsis thaliana OX=3702 GN=DTX8 PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.7e-08 Identity = 32/56 (57.14%), Postives = 45/56 (80.36%), Query Frame = 0
BLAST of HG10003456 vs. ExPASy Swiss-Prot
Match: Q9SIA1 (Protein DETOXIFICATION 5 OS=Arabidopsis thaliana OX=3702 GN=DTX5 PE=3 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 6.5e-07 Identity = 28/69 (40.58%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of HG10003456 vs. ExPASy Swiss-Prot
Match: Q1PFG9 (Protein DETOXIFICATION 7 OS=Arabidopsis thaliana OX=3702 GN=DTX7 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.1e-06 Identity = 30/57 (52.63%), Postives = 45/57 (78.95%), Query Frame = 0
BLAST of HG10003456 vs. ExPASy Swiss-Prot
Match: Q8L731 (Protein DETOXIFICATION 12 OS=Arabidopsis thaliana OX=3702 GN=DTX12 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 3.3e-06 Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of HG10003456 vs. ExPASy Swiss-Prot
Match: Q9C994 (Protein DETOXIFICATION 14 OS=Arabidopsis thaliana OX=3702 GN=DTX14 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 3.3e-06 Identity = 29/60 (48.33%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of HG10003456 vs. ExPASy TrEMBL
Match: A0A5A7TDD2 (Protein DETOXIFICATION 12-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00690 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 3.1e-20 Identity = 61/81 (75.31%), Postives = 66/81 (81.48%), Query Frame = 0
BLAST of HG10003456 vs. ExPASy TrEMBL
Match: A0A0A0KST7 (Protein DETOXIFICATION OS=Cucumis sativus OX=3659 GN=Csa_5G649880 PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.2e-19 Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 0
BLAST of HG10003456 vs. ExPASy TrEMBL
Match: A0A6J1EI79 (Protein DETOXIFICATION OS=Cucurbita moschata OX=3662 GN=LOC111432792 PE=3 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 3.5e-19 Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 0
BLAST of HG10003456 vs. ExPASy TrEMBL
Match: A0A6J1CJB5 (Protein DETOXIFICATION OS=Momordica charantia OX=3673 GN=LOC111012127 PE=3 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 4.5e-19 Identity = 56/69 (81.16%), Postives = 61/69 (88.41%), Query Frame = 0
BLAST of HG10003456 vs. ExPASy TrEMBL
Match: A0A6J1I8X8 (Protein DETOXIFICATION OS=Cucurbita maxima OX=3661 GN=LOC111472575 PE=3 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.3e-18 Identity = 53/69 (76.81%), Postives = 60/69 (86.96%), Query Frame = 0
BLAST of HG10003456 vs. TAIR 10
Match: AT1G66780.1 (MATE efflux family protein ) HSP 1 Score: 59.3 bits (142), Expect = 1.9e-09 Identity = 32/56 (57.14%), Postives = 45/56 (80.36%), Query Frame = 0
BLAST of HG10003456 vs. TAIR 10
Match: AT2G04090.1 (MATE efflux family protein ) HSP 1 Score: 54.7 bits (130), Expect = 4.7e-08 Identity = 28/69 (40.58%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of HG10003456 vs. TAIR 10
Match: AT1G64820.1 (MATE efflux family protein ) HSP 1 Score: 53.9 bits (128), Expect = 7.9e-08 Identity = 30/57 (52.63%), Postives = 45/57 (78.95%), Query Frame = 0
BLAST of HG10003456 vs. TAIR 10
Match: AT1G15170.1 (MATE efflux family protein ) HSP 1 Score: 52.4 bits (124), Expect = 2.3e-07 Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of HG10003456 vs. TAIR 10
Match: AT1G71140.1 (MATE efflux family protein ) HSP 1 Score: 52.4 bits (124), Expect = 2.3e-07 Identity = 29/60 (48.33%), Postives = 43/60 (71.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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