HG10003328 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10003328
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein transport protein Sec61 subunit gamma
Location	Chr11: 20245431 .. 20245731 (-)
RNA-Seq Expression	HG10003328
Synteny	HG10003328

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCCATTGATTCCGCTTTCGATCCACTCCGGGAGTTTGCTAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCCGATCGCAAAGGTACAATTTCCGAATCCCTTTTCATCTCTTTGTTTTAATCTTTGGCGGAGATCTTTTAACCATTTTTCTCTGTTTCGCGAGATTTTTGTAGAGTTCACAAAGGTTGCGGTTCGTACAGCGATTGGCTTCGTCGTTAGGGGATTCGTCGGTTTCTTCGTCAAGCTCATCTTTATTCCCATCAATAACATCATCGTCGGATCTGGCTAG

mRNA sequence

ATGGACGCCATTGATTCCGCTTTCGATCCACTCCGGGAGTTTGCTAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCCGATCGCAAAGAGTTCACAAAGGTTGCGGTTCGTACAGCGATTGGCTTCGTCGTTAGGGGATTCGTCGGTTTCTTCGTCAAGCTCATCTTTATTCCCATCAATAACATCATCGTCGGATCTGGCTAG

Coding sequence (CDS)

ATGGACGCCATTGATTCCGCTTTCGATCCACTCCGGGAGTTTGCTAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCCGATCGCAAAGAGTTCACAAAGGTTGCGGTTCGTACAGCGATTGGCTTCGTCGTTAGGGGATTCGTCGGTTTCTTCGTCAAGCTCATCTTTATTCCCATCAATAACATCATCGTCGGATCTGGCTAG

Protein sequence

MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIPINNIIVGSG

Homology

[Close]

BLAST of HG10003328 vs. NCBI nr
Match: XP_004145664.1 (protein transport protein Sec61 subunit gamma [Cucumis sativus] >XP_008450108.1 PREDICTED: protein transport protein Sec61 subunit gamma-like [Cucumis melo] >XP_012460780.1 PREDICTED: protein transport protein Sec61 subunit gamma [Gossypium raimondii] >XP_012460781.1 PREDICTED: protein transport protein Sec61 subunit gamma [Gossypium raimondii] >XP_012460782.1 PREDICTED: protein transport protein Sec61 subunit gamma [Gossypium raimondii] >XP_016681000.1 protein transport protein Sec61 subunit gamma [Gossypium hirsutum] >XP_016681001.1 protein transport protein Sec61 subunit gamma [Gossypium hirsutum] >XP_022156520.1 protein transport protein Sec61 subunit gamma [Momordica charantia] >XP_022934076.1 protein transport protein Sec61 subunit gamma-like [Cucurbita moschata] >XP_022983556.1 protein transport protein Sec61 subunit gamma-like [Cucurbita maxima] >XP_023526351.1 protein transport protein Sec61 subunit gamma-like [Cucurbita pepo subsp. pepo] >XP_038876188.1 protein transport protein Sec61 subunit gamma-like [Benincasa hispida] >KAA3464170.1 protein transport protein Sec61 subunit gamma [Gossypium australe] >KAB2034429.1 hypothetical protein ES319_D04G085300v1 [Gossypium barbadense] >KAG6581101.1 Protein transport protein Sec61 subunit gamma, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017832.1 Protein transport protein Sec61 subunit gamma [Cucurbita argyrosperma subsp. argyrosperma] >MBA0572089.1 hypothetical protein [Gossypium lobatum] >MBA0630508.1 hypothetical protein [Gossypium davidsonii] >MBA0666224.1 hypothetical protein [Gossypium klotzschianum] >MBA0750649.1 hypothetical protein [Gossypium gossypioides] >MBA0842256.1 hypothetical protein [Gossypium armourianum] >MBA0872547.1 hypothetical protein [Gossypium schwendimanii] >TYG73313.1 hypothetical protein ES288_D04G091500v1 [Gossypium darwinii] >TYH76504.1 hypothetical protein ES332_D04G091100v1 [Gossypium tomentosum] >TYI86738.1 hypothetical protein E1A91_D04G086100v1 [Gossypium mustelinum])

HSP 1 Score: 133.3 bits (334), Expect = 8.2e-28
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIP 60
          MDAIDS FDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of HG10003328 vs. NCBI nr
Match: XP_028063760.1 (protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063762.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063763.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063764.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063765.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063766.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063767.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099424.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099425.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099426.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099427.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099428.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099430.1 protein transport protein Sec61 subunit gamma [Camellia sinensis])

HSP 1 Score: 132.5 bits (332), Expect = 1.4e-27
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIP 60
          MDA+DS FDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIP
Sbjct: 1  MDALDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of HG10003328 vs. NCBI nr
Match: XP_007215225.2 (uncharacterized protein LOC18784392 [Prunus persica] >ONI19949.1 hypothetical protein PRUPE_3G307000 [Prunus persica] >ONI19950.1 hypothetical protein PRUPE_3G307000 [Prunus persica])

HSP 1 Score: 132.1 bits (331), Expect = 1.8e-27
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1   MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIP 60
           MDAIDS FDPLREF+KDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIP
Sbjct: 75  MDAIDSVFDPLREFSKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 134

Query: 61  INNIIVGSG 70
           INNIIVGSG
Sbjct: 135 INNIIVGSG 143

[Close]

BLAST of HG10003328 vs. NCBI nr
Match: XP_012489479.1 (PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimondii] >XP_012489480.1 PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimondii] >XP_012489481.1 PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimondii] >XP_016686809.1 protein transport protein Sec61 subunit gamma [Gossypium hirsutum] >XP_016695151.1 protein transport protein Sec61 subunit gamma-like [Gossypium hirsutum] >XP_016695152.1 protein transport protein Sec61 subunit gamma-like [Gossypium hirsutum] >KAB2002517.1 hypothetical protein ES319_D11G071700v1 [Gossypium barbadense] >TYG44137.1 hypothetical protein ES288_D11G074400v1 [Gossypium darwinii] >TYH42588.1 hypothetical protein ES332_D11G073800v1 [Gossypium tomentosum] >TYI54418.1 hypothetical protein E1A91_D11G073600v1 [Gossypium mustelinum] >KAB2002518.1 hypothetical protein ES319_D11G071700v1 [Gossypium barbadense])

HSP 1 Score: 132.1 bits (331), Expect = 1.8e-27
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIP 60
          MDAIDS FDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVV GFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVALRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of HG10003328 vs. NCBI nr
Match: XP_008231108.1 (PREDICTED: protein transport protein Sec61 subunit gamma [Prunus mume] >XP_016649155.1 PREDICTED: protein transport protein Sec61 subunit gamma [Prunus mume] >XP_021823017.1 protein transport protein Sec61 subunit gamma [Prunus avium] >XP_038698211.1 protein transport protein Sec61 subunit gamma isoform X2 [Tripterygium wilfordii] >PQP94489.1 uncharacterized protein Pyn_35397 [Prunus yedoensis var. nudiflora] >CAB4275454.1 unnamed protein product [Prunus armeniaca] >PQP96178.1 uncharacterized protein Pyn_36215 [Prunus yedoensis var. nudiflora] >CAB4305825.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 132.1 bits (331), Expect = 1.8e-27
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIP 60
          MDAIDS FDPLREF+KDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFSKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of HG10003328 vs. ExPASy Swiss-Prot
Match: P38385 (Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0178400 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.6e-29
Identity = 64/69 (92.75%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 1  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIP 60
          MDA+DS  DPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVV GFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAARTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of HG10003328 vs. ExPASy Swiss-Prot
Match: P0DI74 (Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana OX=3702 GN=SEC61G1 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 2.2e-28
Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIP 60
          MDAIDS  DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]

BLAST of HG10003328 vs. ExPASy Swiss-Prot
Match: P0DI75 (Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana OX=3702 GN=SEC61G2 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 2.2e-28
Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIP 60
          MDAIDS  DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]

BLAST of HG10003328 vs. ExPASy Swiss-Prot
Match: Q9SMP2 (Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana OX=3702 GN=SEC61G3 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.1e-27
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIP 60
          M+AIDSA DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKL+FIP
Sbjct: 1  MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLVFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]

BLAST of HG10003328 vs. ExPASy Swiss-Prot
Match: Q7Z1B8 (Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis OX=213494 GN=SEC61G PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 5.9e-21
Identity = 49/68 (72.06%), Postives = 56/68 (82.35%), Query Frame = 0


Query: 1  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIP 60
          MD +    +P R+FAKDS+RLVKRC KPDRKEF K+AV TAIGF + GF+GFFVKLI IP
Sbjct: 1  MDQVTKFIEPGRQFAKDSIRLVKRCTKPDRKEFQKIAVATAIGFCIMGFIGFFVKLIHIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]

BLAST of HG10003328 vs. ExPASy TrEMBL
Match: A0A1U8ISF2 (protein transport protein Sec61 subunit gamma OS=Gossypium hirsutum OX=3635 GN=LOC107899725 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.0e-28
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIP 60
          MDAIDS FDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of HG10003328 vs. ExPASy TrEMBL
Match: A0A5D2CZA3 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D04G091500v1 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.0e-28
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIP 60
          MDAIDS FDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of HG10003328 vs. ExPASy TrEMBL
Match: A0A0D2TL23 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G086400 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.0e-28
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIP 60
          MDAIDS FDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of HG10003328 vs. ExPASy TrEMBL
Match: A0A5D2VBP1 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D04G086100v1 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.0e-28
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIP 60
          MDAIDS FDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of HG10003328 vs. ExPASy TrEMBL
Match: A0A6J1J2N1 (protein transport protein Sec61 subunit gamma-like OS=Cucurbita maxima OX=3661 GN=LOC111482125 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.0e-28
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIP 60
          MDAIDS FDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]

BLAST of HG10003328 vs. TAIR 10
Match: AT4G24920.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 125.6 bits (314), Expect = 1.6e-29
Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIP 60
          MDAIDS  DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]

BLAST of HG10003328 vs. TAIR 10
Match: AT5G50460.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 125.6 bits (314), Expect = 1.6e-29
Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIP 60
          MDAIDS  DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]

BLAST of HG10003328 vs. TAIR 10
Match: AT3G48570.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 123.2 bits (308), Expect = 7.9e-29
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MDAIDSAFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVRGFVGFFVKLIFIP 60
          M+AIDSA DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVV GFVGFFVKL+FIP
Sbjct: 1  MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLVFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

The following BLAST results are available for this feature:

BLAST of HG10003328 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145664.1	8.2e-28	97.10	protein transport protein Sec61 subunit gamma [Cucumis sativus] >XP_008450108.1 ...	[more]
XP_028063760.1	1.4e-27	95.65	protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063762....	[more]
XP_007215225.2	1.8e-27	95.65	uncharacterized protein LOC18784392 [Prunus persica] >ONI19949.1 hypothetical pr...	[more]
XP_012489479.1	1.8e-27	95.65	PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimond...	[more]
XP_008231108.1	1.8e-27	95.65	PREDICTED: protein transport protein Sec61 subunit gamma [Prunus mume] >XP_01664...	[more]

BLAST of HG10003328 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P38385	2.6e-29	92.75	Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica OX...	[more]
P0DI74	2.2e-28	91.18	Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana OX=3702 ...	[more]
P0DI75	2.2e-28	91.18	Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SMP2	1.1e-27	89.71	Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q7Z1B8	5.9e-21	72.06	Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis OX=21349...	[more]

BLAST of HG10003328 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1U8ISF2	4.0e-28	97.10	protein transport protein Sec61 subunit gamma OS=Gossypium hirsutum OX=3635 GN=L...	[more]
A0A5D2CZA3	4.0e-28	97.10	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D04G091500v1 PE=...	[more]
A0A0D2TL23	4.0e-28	97.10	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G086400 PE=3 ...	[more]
A0A5D2VBP1	4.0e-28	97.10	Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D04G086100v1 P...	[more]
A0A6J1J2N1	4.0e-28	97.10	protein transport protein Sec61 subunit gamma-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of HG10003328 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24920.1	1.6e-29	91.18	secE/sec61-gamma protein transport protein	[more]
AT5G50460.1	1.6e-29	91.18	secE/sec61-gamma protein transport protein	[more]
AT3G48570.1	7.9e-29	89.71	secE/sec61-gamma protein transport protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008158	Protein translocase SEC61 complex, gamma subunit	TIGRFAM	TIGR00327	TIGR00327	coord: 11..66 e-value: 1.5E-15 score: 54.7
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	PFAM	PF00584	SecE	coord: 13..65 e-value: 8.3E-13 score: 48.0
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	PROSITE	PS01067	SECE_SEC61G	coord: 14..42
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	HAMAP	MF_00422	SecE	coord: 9..64 score: 12.263852
IPR023391	Protein translocase SecE domain superfamily	GENE3D	1.20.5.820	Preprotein translocase SecE subunit	coord: 8..68 e-value: 5.9E-30 score: 104.8
IPR023391	Protein translocase SecE domain superfamily	SUPERFAMILY	103456	Preprotein translocase SecE subunit	coord: 5..65
None	No IPR available	PANTHER	PTHR12309:SF24	PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA-3	coord: 1..69
None	No IPR available	PANTHER	PTHR12309	SEC61 GAMMA SUBUNIT	coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10003328.1	HG10003328.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031204	posttranslational protein targeting to membrane, translocation
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006605	protein targeting
biological_process	GO:0015031	protein transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0071261	Ssh1 translocon complex
cellular_component	GO:0016020	membrane
molecular_function	GO:0008320	protein transmembrane transporter activity