HG10003126 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10003126
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr11: 17693009 .. 17693212 (-)
RNA-Seq ExpressionHG10003126
SyntenyHG10003126
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATAAAAAAGCTACTCACACTTCAAAAGAAAGTACAATATTTCATGTTAGAGGCCGGGAGAGGTGCAGCAGAGAATACCCTGAGAAAGCGCACGACAACTCCTCGAATTTGTGCTCAGACACGAAATCATTCTCGCTCCAGCAACCGCGTCGTGAAATGGCAAAAGTGATTGCACGCATCCCAGCTCCGAAGGAGACCTAA

mRNA sequence

ATGCATAAAAAAGCTACTCACACTTCAAAAGAAAGTACAATATTTCATGTTAGAGGCCGGGAGAGGTGCAGCAGAGAATACCCTGAGAAAGCGCACGACAACTCCTCGAATTTGTGCTCAGACACGAAATCATTCTCGCTCCAGCAACCGCGTCGTGAAATGGCAAAAGTGATTGCACGCATCCCAGCTCCGAAGGAGACCTAA

Coding sequence (CDS)

ATGCATAAAAAAGCTACTCACACTTCAAAAGAAAGTACAATATTTCATGTTAGAGGCCGGGAGAGGTGCAGCAGAGAATACCCTGAGAAAGCGCACGACAACTCCTCGAATTTGTGCTCAGACACGAAATCATTCTCGCTCCAGCAACCGCGTCGTGAAATGGCAAAAGTGATTGCACGCATCCCAGCTCCGAAGGAGACCTAA

Protein sequence

MHKKATHTSKESTIFHVRGRERCSREYPEKAHDNSSNLCSDTKSFSLQQPRREMAKVIARIPAPKET
Homology
The following BLAST results are available for this feature:
BLAST of HG10003126 vs.
Match NameE-valueIdentityDescription
BLAST of HG10003126 vs.
Match NameE-valueIdentityDescription
BLAST of HG10003126 vs.
Match NameE-valueIdentityDescription
BLAST of HG10003126 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10003126.1HG10003126.1mRNA