HG10003097 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10003097
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionGamma-glutamyl phosphate reductase
LocationChr11: 17347529 .. 17347843 (-)
RNA-Seq ExpressionHG10003097
SyntenyHG10003097
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGATCGTCGAGCGCCTCCATTGTCTCGGATAAGGGATTCGTAGGTCCATCGTTGTCGTCGTCGCAATCCGCAATCTTCAGATCTTCGAATGTGAGTTCCGGCTTGGAATCAGAGCCTTACCTGCCGACGTTCAATCCGTTCTCTCACGCGGCCGAGAAGAAACGTCGCCATCTTAAGCTCGCTAAGATTTTCGTCCACTCCATCCCTTTCATCGTCGTCTTTTGCGCCATCGTTCTGTGGTTATTCTCCGATCCAGGTACTGAAATTACTCGAGTCAAAGACGCTCGTAGATCGAGATCGACTATTTGA

mRNA sequence

ATGAAGAGATCGTCGAGCGCCTCCATTGTCTCGGATAAGGGATTCGTAGGTCCATCGTTGTCGTCGTCGCAATCCGCAATCTTCAGATCTTCGAATGTGAGTTCCGGCTTGGAATCAGAGCCTTACCTGCCGACGTTCAATCCGTTCTCTCACGCGGCCGAGAAGAAACGTCGCCATCTTAAGCTCGCTAAGATTTTCGTCCACTCCATCCCTTTCATCGTCGTCTTTTGCGCCATCGTTCTGTGGTTATTCTCCGATCCAGGTACTGAAATTACTCGAGTCAAAGACGCTCGTAGATCGAGATCGACTATTTGA

Coding sequence (CDS)

ATGAAGAGATCGTCGAGCGCCTCCATTGTCTCGGATAAGGGATTCGTAGGTCCATCGTTGTCGTCGTCGCAATCCGCAATCTTCAGATCTTCGAATGTGAGTTCCGGCTTGGAATCAGAGCCTTACCTGCCGACGTTCAATCCGTTCTCTCACGCGGCCGAGAAGAAACGTCGCCATCTTAAGCTCGCTAAGATTTTCGTCCACTCCATCCCTTTCATCGTCGTCTTTTGCGCCATCGTTCTGTGGTTATTCTCCGATCCAGGTACTGAAATTACTCGAGTCAAAGACGCTCGTAGATCGAGATCGACTATTTGA

Protein sequence

MKRSSSASIVSDKGFVGPSLSSSQSAIFRSSNVSSGLESEPYLPTFNPFSHAAEKKRRHLKLAKIFVHSIPFIVVFCAIVLWLFSDPGTEITRVKDARRSRSTI
Homology
BLAST of HG10003097 vs. NCBI nr
Match: KAA0041054.1 (Gamma-glutamyl phosphate reductase [Cucumis melo var. makuwa] >TYK12064.1 Gamma-glutamyl phosphate reductase [Cucumis melo var. makuwa])

HSP 1 Score: 174.5 bits (441), Expect = 4.8e-40
Identity = 94/106 (88.68%), Postives = 99/106 (93.40%), Query Frame = 0

Query: 1   MKRSSSASIVSDKGFVGPSLSS--SQSAIFRSSNVSSGLESEPYLPTFNPFSHAAEKKRR 60
           MKRSSSASIVSDK FV  S SS  SQSAIFRSS+VS GLESEPYLPTF+PFSHAAEKKRR
Sbjct: 1   MKRSSSASIVSDKRFVYSSSSSSLSQSAIFRSSSVSFGLESEPYLPTFSPFSHAAEKKRR 60

Query: 61  HLKLAKIFVHSIPFIVVFCAIVLWLFSDPGTEITRVKDARRSRSTI 105
           HLKLAKIF+HSIPFI++FCAIVLWLFSDPGTEITRVKDARRSRSTI
Sbjct: 61  HLKLAKIFIHSIPFIILFCAIVLWLFSDPGTEITRVKDARRSRSTI 106

BLAST of HG10003097 vs. NCBI nr
Match: KAG6577662.1 (hypothetical protein SDJN03_25236, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015699.1 hypothetical protein SDJN02_23336, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 162.9 bits (411), Expect = 1.5e-36
Identity = 84/104 (80.77%), Postives = 93/104 (89.42%), Query Frame = 0

Query: 1   MKRSSSASIVSDKGFVGPSLSSSQSAIFRSSNVSSGLESEPYLPTFNPFSHAAEKKRRHL 60
           M+RSSSA IVSDK  +  S SSSQSAIFRSS+VSSGLES+ +LPTFNPFSHAA KKRRHL
Sbjct: 1   MRRSSSACIVSDKRSLASSSSSSQSAIFRSSSVSSGLESDVFLPTFNPFSHAAAKKRRHL 60

Query: 61  KLAKIFVHSIPFIVVFCAIVLWLFSDPGTEITRVKDARRSRSTI 105
           KLA+IFVH IPF+V+FCA+VLW FSDPGTEITRVKDA RSRSTI
Sbjct: 61  KLARIFVHFIPFVVIFCAVVLWFFSDPGTEITRVKDAHRSRSTI 104

BLAST of HG10003097 vs. NCBI nr
Match: XP_008448788.1 (PREDICTED: uncharacterized protein LOC103490852 [Cucumis melo])

HSP 1 Score: 145.2 bits (365), Expect = 3.1e-31
Identity = 78/90 (86.67%), Postives = 83/90 (92.22%), Query Frame = 0

Query: 1  MKRSSSASIVSDKGFVGPSLSS--SQSAIFRSSNVSSGLESEPYLPTFNPFSHAAEKKRR 60
          MKRSSSASIVSDK FV  S SS  SQSAIFRSS+VS GLESEPYLPTF+PFSHAAEKKRR
Sbjct: 1  MKRSSSASIVSDKRFVYSSSSSSLSQSAIFRSSSVSFGLESEPYLPTFSPFSHAAEKKRR 60

Query: 61 HLKLAKIFVHSIPFIVVFCAIVLWLFSDPG 89
          HLKLAKIF+HSIPFI++FCAIVLWLFSDPG
Sbjct: 61 HLKLAKIFIHSIPFIILFCAIVLWLFSDPG 90

BLAST of HG10003097 vs. NCBI nr
Match: XP_011650378.1 (uncharacterized protein LOC101212731 isoform X3 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 7.0e-31
Identity = 74/88 (84.09%), Postives = 81/88 (92.05%), Query Frame = 0

Query: 1  MKRSSSASIVSDKGFVGPSLSSSQSAIFRSSNVSSGLESEPYLPTFNPFSHAAEKKRRHL 60
          MKRSSSASIVSD  FV  S S S S+IFRSS+VSSGLESEPYLPTF+PFSHAAEKKRRHL
Sbjct: 1  MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHL 60

Query: 61 KLAKIFVHSIPFIVVFCAIVLWLFSDPG 89
          KLAKIF+HSIPF+++FCAIVLWLFSDPG
Sbjct: 61 KLAKIFIHSIPFVILFCAIVLWLFSDPG 88

BLAST of HG10003097 vs. NCBI nr
Match: XP_031737621.1 (uncharacterized protein LOC101212731 isoform X1 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 7.0e-31
Identity = 74/88 (84.09%), Postives = 81/88 (92.05%), Query Frame = 0

Query: 1  MKRSSSASIVSDKGFVGPSLSSSQSAIFRSSNVSSGLESEPYLPTFNPFSHAAEKKRRHL 60
          MKRSSSASIVSD  FV  S S S S+IFRSS+VSSGLESEPYLPTF+PFSHAAEKKRRHL
Sbjct: 1  MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHL 60

Query: 61 KLAKIFVHSIPFIVVFCAIVLWLFSDPG 89
          KLAKIF+HSIPF+++FCAIVLWLFSDPG
Sbjct: 61 KLAKIFIHSIPFVILFCAIVLWLFSDPG 88

BLAST of HG10003097 vs. ExPASy TrEMBL
Match: A0A5D3CLM0 (Gamma-glutamyl phosphate reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00790 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.3e-40
Identity = 94/106 (88.68%), Postives = 99/106 (93.40%), Query Frame = 0

Query: 1   MKRSSSASIVSDKGFVGPSLSS--SQSAIFRSSNVSSGLESEPYLPTFNPFSHAAEKKRR 60
           MKRSSSASIVSDK FV  S SS  SQSAIFRSS+VS GLESEPYLPTF+PFSHAAEKKRR
Sbjct: 1   MKRSSSASIVSDKRFVYSSSSSSLSQSAIFRSSSVSFGLESEPYLPTFSPFSHAAEKKRR 60

Query: 61  HLKLAKIFVHSIPFIVVFCAIVLWLFSDPGTEITRVKDARRSRSTI 105
           HLKLAKIF+HSIPFI++FCAIVLWLFSDPGTEITRVKDARRSRSTI
Sbjct: 61  HLKLAKIFIHSIPFIILFCAIVLWLFSDPGTEITRVKDARRSRSTI 106

BLAST of HG10003097 vs. ExPASy TrEMBL
Match: A0A0A0L1G0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017240 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 5.2e-40
Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 0

Query: 1   MKRSSSASIVSDKGFVGPSLSSSQSAIFRSSNVSSGLESEPYLPTFNPFSHAAEKKRRHL 60
           MKRSSSASIVSD  FV  S S S S+IFRSS+VSSGLESEPYLPTF+PFSHAAEKKRRHL
Sbjct: 1   MKRSSSASIVSDNRFVCSSSSLSLSSIFRSSSVSSGLESEPYLPTFSPFSHAAEKKRRHL 60

Query: 61  KLAKIFVHSIPFIVVFCAIVLWLFSDPGTEITRVKDARRSRSTI 105
           KLAKIF+HSIPF+++FCAIVLWLFSDPGTEITRVKDARRSRSTI
Sbjct: 61  KLAKIFIHSIPFVILFCAIVLWLFSDPGTEITRVKDARRSRSTI 104

BLAST of HG10003097 vs. ExPASy TrEMBL
Match: A0A1S3BKI8 (uncharacterized protein LOC103490852 OS=Cucumis melo OX=3656 GN=LOC103490852 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.5e-31
Identity = 78/90 (86.67%), Postives = 83/90 (92.22%), Query Frame = 0

Query: 1  MKRSSSASIVSDKGFVGPSLSS--SQSAIFRSSNVSSGLESEPYLPTFNPFSHAAEKKRR 60
          MKRSSSASIVSDK FV  S SS  SQSAIFRSS+VS GLESEPYLPTF+PFSHAAEKKRR
Sbjct: 1  MKRSSSASIVSDKRFVYSSSSSSLSQSAIFRSSSVSFGLESEPYLPTFSPFSHAAEKKRR 60

Query: 61 HLKLAKIFVHSIPFIVVFCAIVLWLFSDPG 89
          HLKLAKIF+HSIPFI++FCAIVLWLFSDPG
Sbjct: 61 HLKLAKIFIHSIPFIILFCAIVLWLFSDPG 90

BLAST of HG10003097 vs. ExPASy TrEMBL
Match: A0A6J1E9H6 (uncharacterized protein LOC111431091 OS=Cucurbita moschata OX=3662 GN=LOC111431091 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.2e-29
Identity = 69/91 (75.82%), Postives = 81/91 (89.01%), Query Frame = 0

Query: 1  MKRSSSASIVSDKGFVGPSLSSSQSAIFRSSNVSSGLESEPYLPTFNPFSHAAEKKRRHL 60
          M+RSSSA IVSDK  +  S SSSQSAIFRSS+VSSGLES+ +LPTFNPFSHAA KKRRHL
Sbjct: 1  MRRSSSACIVSDKRSLASSSSSSQSAIFRSSSVSSGLESDVFLPTFNPFSHAAAKKRRHL 60

Query: 61 KLAKIFVHSIPFIVVFCAIVLWLFSDPGTEI 92
          KLA+IFVH IPF+V+FCA+VLW FSDPG+++
Sbjct: 61 KLARIFVHFIPFVVIFCAVVLWFFSDPGSQL 91

BLAST of HG10003097 vs. ExPASy TrEMBL
Match: A0A6J1FKB1 (uncharacterized protein LOC111444994 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444994 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.5e-26
Identity = 70/93 (75.27%), Postives = 80/93 (86.02%), Query Frame = 0

Query: 1  MKRSSSASIVSDKGFV-GPSLSSS-QSAIFRSSNVSSGLESEPYLPTFNPFSHAAEKKRR 60
          MKRS SAS VSDK  +  PSLSSS QSA+FRSS+VSSGL+SE YLPT+NPFSHAAEK+RR
Sbjct: 1  MKRSVSASRVSDKVLLSSPSLSSSLQSAVFRSSSVSSGLDSELYLPTYNPFSHAAEKERR 60

Query: 61 HLKLAKIFVHSIPFIVVFCAIVLWLFSDPGTEI 92
           LKLAKIF+H IP +VVFCA+VLW FSDPG +I
Sbjct: 61 RLKLAKIFIHFIPVVVVFCAVVLWFFSDPGQQI 93

BLAST of HG10003097 vs. TAIR 10
Match: AT2G35658.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 1.9e-10
Identity = 37/97 (38.14%), Postives = 59/97 (60.82%), Query Frame = 0

Query: 1  MKRSSSASIVSDK-GFVGPSLSSSQSAIFRSSNVSSGLESEPYLPTFNPFSHAAEKKRRH 60
          M+RS+SASIVSD+     PS S S   I  S++     +S   LP ++P SH  +K +  
Sbjct: 1  MRRSASASIVSDQLSANSPSPSPSPPRIKTSADSD---DSHLLLPRYDPNSHPGKKNKSR 60

Query: 61 LKLAKIFVHSIPFIVVFCAIVLWLFSDPGTEITRVKD 97
           + A+  +H IP +++ CA++LW+FS+PG +I  + D
Sbjct: 61 FRSAENAIHFIPIVLILCAVILWMFSNPGNQIQFLGD 94

BLAST of HG10003097 vs. TAIR 10
Match: AT2G35658.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 4.7e-09
Identity = 35/92 (38.04%), Postives = 56/92 (60.87%), Query Frame = 0

Query: 1  MKRSSSASIVSDK-GFVGPSLSSSQSAIFRSSNVSSGLESEPYLPTFNPFSHAAEKKRRH 60
          M+RS+SASIVSD+     PS S S   I  S++     +S   LP ++P SH  +K +  
Sbjct: 1  MRRSASASIVSDQLSANSPSPSPSPPRIKTSADSD---DSHLLLPRYDPNSHPGKKNKSR 60

Query: 61 LKLAKIFVHSIPFIVVFCAIVLWLFSDPGTEI 92
           + A+  +H IP +++ CA++LW+FS+P  +I
Sbjct: 61 FRSAENAIHFIPIVLILCAVILWMFSNPVAKI 89

BLAST of HG10003097 vs. TAIR 10
Match: AT2G35658.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 1.0e-08
Identity = 34/88 (38.64%), Postives = 54/88 (61.36%), Query Frame = 0

Query: 1  MKRSSSASIVSDK-GFVGPSLSSSQSAIFRSSNVSSGLESEPYLPTFNPFSHAAEKKRRH 60
          M+RS+SASIVSD+     PS S S   I  S++     +S   LP ++P SH  +K +  
Sbjct: 1  MRRSASASIVSDQLSANSPSPSPSPPRIKTSADSD---DSHLLLPRYDPNSHPGKKNKSR 60

Query: 61 LKLAKIFVHSIPFIVVFCAIVLWLFSDP 88
           + A+  +H IP +++ CA++LW+FS+P
Sbjct: 61 FRSAENAIHFIPIVLILCAVILWMFSNP 85

BLAST of HG10003097 vs. TAIR 10
Match: AT5G61630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 8.3e-06
Identity = 21/53 (39.62%), Postives = 35/53 (66.04%), Query Frame = 0

Query: 40 EPYLPTF-NPFSHAAEKKRRHLKLAKIFVHSIPFIVVFCAIVLWLFSDPGTEI 92
          E  LP++ NP     +K++   K A+  +H IPF+++ CA+VLWLFS+P  ++
Sbjct: 33 ENELPSYNNPPEEMVKKEKSRAKFAENAIHIIPFVLLACALVLWLFSNPDVDV 85

BLAST of HG10003097 vs. TAIR 10
Match: AT5G07490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G61630.1); Has 50 Blast hits to 50 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 7.0e-05
Identity = 21/54 (38.89%), Postives = 33/54 (61.11%), Query Frame = 0

Query: 38 ESEPYLPTFNPFSHAAEKKRRHLKLAKIFVHSIPFIVVFCAIVLWLFSDPGTEI 92
          E  PY PT    +   +K++   K A+  VH IPF+++ CA+VLW FS+P  ++
Sbjct: 32 EPAPYDPTGQEMT---KKEKSRTKFAENAVHIIPFVLLACALVLWFFSNPDVDV 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0041054.14.8e-4088.68Gamma-glutamyl phosphate reductase [Cucumis melo var. makuwa] >TYK12064.1 Gamma-... [more]
KAG6577662.11.5e-3680.77hypothetical protein SDJN03_25236, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_008448788.13.1e-3186.67PREDICTED: uncharacterized protein LOC103490852 [Cucumis melo][more]
XP_011650378.17.0e-3184.09uncharacterized protein LOC101212731 isoform X3 [Cucumis sativus][more]
XP_031737621.17.0e-3184.09uncharacterized protein LOC101212731 isoform X1 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CLM02.3e-4088.68Gamma-glutamyl phosphate reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A0A0L1G05.2e-4086.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017240 PE=4 SV=1[more]
A0A1S3BKI81.5e-3186.67uncharacterized protein LOC103490852 OS=Cucumis melo OX=3656 GN=LOC103490852 PE=... [more]
A0A6J1E9H63.2e-2975.82uncharacterized protein LOC111431091 OS=Cucurbita moschata OX=3662 GN=LOC1114310... [more]
A0A6J1FKB12.5e-2675.27uncharacterized protein LOC111444994 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
AT2G35658.21.9e-1038.14unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G35658.14.7e-0938.04unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G35658.31.0e-0838.64unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G61630.18.3e-0639.62unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G07490.17.0e-0538.89unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR34189TRANSMEMBRANE PROTEINcoord: 1..93
NoneNo IPR availablePANTHERPTHR34189:SF13TRANSMEMBRANE PROTEINcoord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10003097.1HG10003097.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane