HG10003088 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10003088
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	Chr11: 17247265 .. 17250517 (+)
RNA-Seq Expression	HG10003088
Synteny	HG10003088

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTCGCCACTACTGCCTCCAGCTTCGCGTTTACCAAGCGAATATCGCCATTAATTACTTCTTCCGATAATGGAAAATCGAACCGGATCTTTTCCTTCTCGTCCTCCTCTCTCAGAACGGCTCCGCTTTCCACTAATTTTCTCATCCCATTCGCCGGTGGCAGCGTCTCCGGGGACTTTTCCGGCGTGAAACTCCGGCCGTCTTTGCTTAATCCGGATTCGTCCCGTGGATCCAAGGGCAAACGGGGCGTTGTTACTATGGTAAATACCTGAGATTTTCTGTTCTTCCGGTGTTTTTGGGATATTGGTTCGAAATTCTGTTGCTTGTTTGTTCCTTCGACTACTTGGGTTAACTAAATTGTAGTTTATGAGTCCTCTTGGGGGAAATATTGCGATATTGGTTTGAAATTTTGCTGCTTGTTTGTTCATATATATATATATATGTATGTATGTATGTAGGTATGTATATGTATGTATATAACTCTCAATGTGGTTCCCTTATAATGTGCATCTCTTAATATGTCTTGGTGCACATGAATCCTCGTAACTCTTTTGATTTGGGCATATGCCCTTCTTTTGTAAATTCATACATCACTTAAATTTGTTTCTTATAAAAATTAAAAAAAAAATTGTTGCTTATTTGTTCTTTTACTACTTTGGTTCACTGTATTGTAGTTTCATAGTCCTATTTTGGAGAATTGTTGCTATGCTTTGTGGAAATTTGATAGCTGTTTACTTAGTGGTGTGATCAAATACTTACAAACGAAAGAGTCTCAATCTCAAATAGGCCGGGAGATTATAATGGAGTCTAAAAGGCAGACCCTTTTGGGAAAACTAATTTGTGACTTTAGCTACCTACAATGTACATGTGGGTTTGAATGAGCCTCTTTTCTAAATTTAAACGATGATTCTTACAGTTAACGGCCTCCCTTGTACTCTAAATGTTCTTTTCAGCACCACTCTACATTCCTGCTGGCCTCTTGTGTCTCATCTACCTGATTTCTTTGAACAGGTTATTCCATTTTCAAGGGGAAGTGCATGGGAGCAACCTCCTCCAGATTTGGCATCTTATTTATACAAGAATCGAATTGTATACTTGGGCATGTCTCTTGTCCCTTCTGTCACAGAGTTGATACTTGCTGAATTTCTTTACCTTCAGTATGAGGATGAAGCAAAGCCTATTTATCTTTACATTAACTCCACGGGGACAACAAAGGTCCACGGGGACAACAAAGGTTTTTTTGATCTCACATTTTATATAGCTTAAACTTTAAGGTGATACCTTGGTTTTTTAATGATCGTGATGTAAGCAACTGGCAGAGGCCTTTGTTGTGTTAAGCACTTCCGTCAACTGTCTATAGTGATGAAAATAACATAAGGAGTAAGAAAAGGTTTCAATTTTCATAGCCGTTCTAATAGTAAAGCAGCATTTCAGCTTTTTTCTTGACCCCAAAAAAAAAAAAAAGGAAAGAAAGAAAGAGAAAACACCCATAATCCCTTCATCCTCCCCTTCCTGTTTTATATGCTCTTGCTAAAAGTAAAACATCTAAAAGTTCAACACGGCTTACCATTTTGAAAGAAACTGTTTGTCGACTTCAACTTACGTGCAGAAAAATGATTATTAACCTTTTGATCTTTTCCATGTTATAGTAGATCATAATGAGTGCTTGCATTTTCCAGGGTGGCGAGAAGTTGGGCTATGAGACTGAAGCATTTGCGATATATGATGTTATGAGGTTGTGATGTGAATGTTTATTTAATGGGTTTGGTATTCTGTTCTTTAGAATCTTGTTCTTTTATTGGGCATTCAAGACATGTTCAGGACCCAACGAAAGTTGTTTTCTTCATCACTTAGTATTCTTTCACTGTAGGTATGTTAAGCCTCCTATATTCACATTATGCGTTGGTAATGCTTGGGGAGAAGCAGCACTTCTTTTGGCAGCTGGTGCTCAGGGAAACCGTTCTGCATTGCCCTCATCAACAATAATGATAAAGCAGGTGTTCTAATCATCAACGGATATCTTTAGAATTTTTTTTCCTCCTTATTCTTCTACTCACTTCCTAACTTCAGAAAGGTGGTTGTATCTTGCATAGACTTGTCACGCTACATGTAAGCTGGTCTTTTGATATACTTTTGTGGAGTTACAGAATTTTTTGTTTTTTCTCTTTCAATTTGCAGCCAATTGCAAGGTTTCAGGGTCAAGCAAACGACATTGAGCTTGCTAGAAAAGAAGTACGGAATGTGAAGGCAGAACTGGTAAGATCATGGTTGAAATTTGTGTACTGGAATAACCTTCTCTTCATTCCCATACTCTTCTCTTTGTTTTCTTCATTCCTGAAATGAGAGGTAGGGATGTGCATTTGCTATTGTTCACTGGAGTTCTCAAATGGCTGGGATTTTTTTTGGGTAAGAAACTTAAACCATGTATAAAATAAAGATAGAGGTGATAACCACTTGGGTTCAAGCTATGGTGGCAGCCTACACATGAGTTATCATAGTAACTAAACCTAGTAAAGTTAGGTGGTTGTTCTGTGAGAATTATCAAGATGTGCGTAAGCTGGTTCAAACACTAATTTATAAATAAATTTTTTATAAAAATAAAGGCGAGTGCGAAGGACAGGGAGGTGTCTTCCTAGTTCAGATTAGGATTTACAGGCAGAAAGTTTCCCTAATTAGATCACCAAGAAGTAGTTACAAAAATGCTGTCAGGAGAGGTACAAGAAGTGGCTACAAAAATGAACAAACCAAAAAATCCTCTCAATGTCTAGAATAGTGTTGAAAAGTAATACTTATTTCTAGCATAAATTCCATGACAAGCTCACTTTCCACCAAAGAACAGCAGCTTGGTTCAGGAGTGTGCCATCAAAATAATTATTGGTGTATAGGGTTGTTTTTAGAAAGTTGAAATTTTACATTGTTCCTTCTAAACAAGCATAGGTAAACAAACTCACAGTTTCTTCCTTTTTAAAATCGATATTGAAGGTTAAGCTCTATGCCAAGCATATCGGAAAGTCGACTGAGGAGATTGAAGCTGATATCAGGCGGCCAAAATCTTTTAGTCCCAGTGAAGCAGTTGAATATGGTATCATAGATAAGGTACCTGAATTGCAAAGTGTACGAATTTATCACATGTTATTGTGGCAATGCATTAAATTGAATATCATTTACTTTCATCAGGTACTATACAACGAAAGAACAACTGAGGACCGGGGAGTTGTATCTGACCTGAAAAAGGCACAACTTATTTAG

mRNA sequence

ATGGAGGTCGCCACTACTGCCTCCAGCTTCGCGTTTACCAAGCGAATATCGCCATTAATTACTTCTTCCGATAATGGAAAATCGAACCGGATCTTTTCCTTCTCGTCCTCCTCTCTCAGAACGGCTCCGCTTTCCACTAATTTTCTCATCCCATTCGCCGGTGGCAGCGTCTCCGGGGACTTTTCCGGCGTGAAACTCCGGCCGTCTTTGCTTAATCCGGATTCGTCCCGTGGATCCAAGGGCAAACGGGGCGTTGTTACTATGGTTATTCCATTTTCAAGGGGAAGTGCATGGGAGCAACCTCCTCCAGATTTGGCATCTTATTTATACAAGAATCGAATTGTATACTTGGGCATGTCTCTTGTCCCTTCTGTCACAGAGTTGATACTTGCTGAATTTCTTTACCTTCAGTATGAGGATGAAGCAAAGCCTATTTATCTTTACATTAACTCCACGGGGACAACAAAGATCATAATGAGTGCTTGCATTTTCCAGGGTGGCGAGAAGTTGGGCTATGAGACTGAAGCATTTGCGATATATGATGTTATGAGGTATGTTAAGCCTCCTATATTCACATTATGCGTTGGTAATGCTTGGGGAGAAGCAGCACTTCTTTTGGCAGCTGGTGCTCAGGGAAACCGTTCTGCATTGCCCTCATCAACAATAATGATAAAGCAGCCAATTGCAAGGTTTCAGGGTCAAGCAAACGACATTGAGCTTGCTAGAAAAGAAGTACGGAATGTGAAGGCAGAACTGGTTAAGCTCTATGCCAAGCATATCGGAAAGTCGACTGAGGAGATTGAAGCTGATATCAGGCGGCCAAAATCTTTTAGTCCCAGTGAAGCAGTTGAATATGGTATCATAGATAAGGTACTATACAACGAAAGAACAACTGAGGACCGGGGAGTTGTATCTGACCTGAAAAAGGCACAACTTATTTAG

Coding sequence (CDS)

ATGGAGGTCGCCACTACTGCCTCCAGCTTCGCGTTTACCAAGCGAATATCGCCATTAATTACTTCTTCCGATAATGGAAAATCGAACCGGATCTTTTCCTTCTCGTCCTCCTCTCTCAGAACGGCTCCGCTTTCCACTAATTTTCTCATCCCATTCGCCGGTGGCAGCGTCTCCGGGGACTTTTCCGGCGTGAAACTCCGGCCGTCTTTGCTTAATCCGGATTCGTCCCGTGGATCCAAGGGCAAACGGGGCGTTGTTACTATGGTTATTCCATTTTCAAGGGGAAGTGCATGGGAGCAACCTCCTCCAGATTTGGCATCTTATTTATACAAGAATCGAATTGTATACTTGGGCATGTCTCTTGTCCCTTCTGTCACAGAGTTGATACTTGCTGAATTTCTTTACCTTCAGTATGAGGATGAAGCAAAGCCTATTTATCTTTACATTAACTCCACGGGGACAACAAAGATCATAATGAGTGCTTGCATTTTCCAGGGTGGCGAGAAGTTGGGCTATGAGACTGAAGCATTTGCGATATATGATGTTATGAGGTATGTTAAGCCTCCTATATTCACATTATGCGTTGGTAATGCTTGGGGAGAAGCAGCACTTCTTTTGGCAGCTGGTGCTCAGGGAAACCGTTCTGCATTGCCCTCATCAACAATAATGATAAAGCAGCCAATTGCAAGGTTTCAGGGTCAAGCAAACGACATTGAGCTTGCTAGAAAAGAAGTACGGAATGTGAAGGCAGAACTGGTTAAGCTCTATGCCAAGCATATCGGAAAGTCGACTGAGGAGATTGAAGCTGATATCAGGCGGCCAAAATCTTTTAGTCCCAGTGAAGCAGTTGAATATGGTATCATAGATAAGGTACTATACAACGAAAGAACAACTGAGGACCGGGGAGTTGTATCTGACCTGAAAAAGGCACAACTTATTTAG

Protein sequence

MEVATTASSFAFTKRISPLITSSDNGKSNRIFSFSSSSLRTAPLSTNFLIPFAGGSVSGDFSGVKLRPSLLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKIIMSACIFQGGEKLGYETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQANDIELARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKSFSPSEAVEYGIIDKVLYNERTTEDRGVVSDLKKAQLI

Homology

[Close]

BLAST of HG10003088 vs. NCBI nr
Match: XP_038902969.1 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 550.4 bits (1417), Expect = 9.8e-153
Identity = 291/313 (92.97%), Postives = 292/313 (93.29%), Query Frame = 0


Query: 1   MEVATTASSFAFTKRISPLITSSDNGKSNRIFSFSSSSLRTAPLSTNFLIPFAGGSVSGD 60
           MEVATTASSFA TKRISPLITSS + KSNR  S SSSSLRT PLSTNFLIPFAGGSVSGD
Sbjct: 1   MEVATTASSFALTKRISPLITSSHDRKSNRALSLSSSSLRTPPLSTNFLIPFAGGSVSGD 60

Query: 61  FSGVKLRPSLLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRPS LN DSS GSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPSSLNTDSSPGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKIIMSACIFQGGEKLGYETEAFAIY 180
           LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTK         GGEKLGYETEAFAIY
Sbjct: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTK---------GGEKLGYETEAFAIY 180

Query: 181 DVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQANDIEL 240
           DVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQA DIEL
Sbjct: 181 DVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDIEL 240

Query: 241 ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKSFSPSEAVEYGIIDKVLYNERTTED 300
           ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPK FSPSEAVEYGIIDKVLYNERTTED
Sbjct: 241 ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERTTED 300

Query: 301 RGVVSDLKKAQLI 314
           RGVVSDLKKAQLI
Sbjct: 301 RGVVSDLKKAQLI 304

[Close]

BLAST of HG10003088 vs. NCBI nr
Match: XP_022155521.1 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Momordica charantia])

HSP 1 Score: 545.4 bits (1404), Expect = 3.1e-151
Identity = 286/313 (91.37%), Postives = 291/313 (92.97%), Query Frame = 0


Query: 1   MEVATTASSFAFTKRISPLITSSDNGKSNRIFSFSSSSLRTAPLSTNFLIPFAGGSVSGD 60
           MEVATTAS+FA TKRISP ITSS N KSNR  SFSSSSLR  PLSTNFL PFAGGSVSGD
Sbjct: 1   MEVATTASTFALTKRISPSITSSHNPKSNRALSFSSSSLRPTPLSTNFLAPFAGGSVSGD 60

Query: 61  FSGVKLRPSLLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           F+GVKLRPS LNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FAGVKLRPSSLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKIIMSACIFQGGEKLGYETEAFAIY 180
           LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTK         GGEKLGYETEAFAIY
Sbjct: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTK---------GGEKLGYETEAFAIY 180

Query: 181 DVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQANDIEL 240
           DVMRYVKPPIFTLCVGNAWGEAALLLAAGA+GNRSALPSSTIM+KQPIARFQGQA DIEL
Sbjct: 181 DVMRYVKPPIFTLCVGNAWGEAALLLAAGARGNRSALPSSTIMMKQPIARFQGQATDIEL 240

Query: 241 ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKSFSPSEAVEYGIIDKVLYNERTTED 300
           ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPK FSPSEAVEYGIIDKVLYNER+ ED
Sbjct: 241 ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERSPED 300

Query: 301 RGVVSDLKKAQLI 314
           RGVVSDLKKAQLI
Sbjct: 301 RGVVSDLKKAQLI 304

[Close]

BLAST of HG10003088 vs. NCBI nr
Match: XP_008448778.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Cucumis melo] >KAA0041047.1 ATP-dependent Clp protease proteolytic subunit-related protein 4 [Cucumis melo var. makuwa] >TYK12057.1 ATP-dependent Clp protease proteolytic subunit-related protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 540.0 bits (1390), Expect = 1.3e-149
Identity = 282/313 (90.10%), Postives = 289/313 (92.33%), Query Frame = 0


Query: 1   MEVATTASSFAFTKRISPLITSSDNGKSNRIFSFSSSSLRTAPLSTNFLIPFAGGSVSGD 60
           MEVATTASSFA TKRISPL  SS+ GKSNR  S SSSS+RTAPLSTNFLIPFAGGSVSGD
Sbjct: 1   MEVATTASSFALTKRISPLFASSNYGKSNRTLSLSSSSVRTAPLSTNFLIPFAGGSVSGD 60

Query: 61  FSGVKLRPSLLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRP  LNP+   GSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPYSLNPNCFPGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKIIMSACIFQGGEKLGYETEAFAIY 180
           LVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTK         GGEKLGYETEAFAIY
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYINSTGTTK---------GGEKLGYETEAFAIY 180

Query: 181 DVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQANDIEL 240
           DVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQA D+EL
Sbjct: 181 DVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDVEL 240

Query: 241 ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKSFSPSEAVEYGIIDKVLYNERTTED 300
           ARKEVRNVKAELVKL+AKH+GKSTEEIEADIRRPK F+PSEAVEYGIIDKVLYNERTTED
Sbjct: 241 ARKEVRNVKAELVKLFAKHVGKSTEEIEADIRRPKYFTPSEAVEYGIIDKVLYNERTTED 300

Query: 301 RGVVSDLKKAQLI 314
           RGVVSDLKKAQLI
Sbjct: 301 RGVVSDLKKAQLI 304

[Close]

BLAST of HG10003088 vs. NCBI nr
Match: XP_004147236.1 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Cucumis sativus] >KGN55823.1 hypothetical protein Csa_011232 [Cucumis sativus])

HSP 1 Score: 538.9 bits (1387), Expect = 2.9e-149
Identity = 280/313 (89.46%), Postives = 289/313 (92.33%), Query Frame = 0


Query: 1   MEVATTASSFAFTKRISPLITSSDNGKSNRIFSFSSSSLRTAPLSTNFLIPFAGGSVSGD 60
           MEVATTASSFA TKRISPLITSS NGKSNR  S SSSS+R APLSTNFLIPFAGGSVSG+
Sbjct: 1   MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGE 60

Query: 61  FSGVKLRPSLLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRPS LNP+ S GSKGKRGVVTMVIPF+RGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKIIMSACIFQGGEKLGYETEAFAIY 180
           LVPSVTELILAEFLYLQYEDE KPIYLY+NSTGTTK         GGEKLGYETEAFA+Y
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTK---------GGEKLGYETEAFAVY 180

Query: 181 DVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQANDIEL 240
           DVM YVKPPIFTLCVGNAWGEAALLLAAGA GNRSALPSSTIMIK+PIARFQGQA D+E+
Sbjct: 181 DVMSYVKPPIFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEI 240

Query: 241 ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKSFSPSEAVEYGIIDKVLYNERTTED 300
           ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPK FSPSEAVEYGIIDKVLYNER TED
Sbjct: 241 ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATED 300

Query: 301 RGVVSDLKKAQLI 314
           RGVVSDLKKAQLI
Sbjct: 301 RGVVSDLKKAQLI 304

[Close]

BLAST of HG10003088 vs. NCBI nr
Match: XP_022934823.1 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Cucurbita moschata])

HSP 1 Score: 530.4 bits (1365), Expect = 1.0e-146
Identity = 273/313 (87.22%), Postives = 287/313 (91.69%), Query Frame = 0


Query: 1   MEVATTASSFAFTKRISPLITSSDNGKSNRIFSFSSSSLRTAPLSTNFLIPFAGGSVSGD 60
           MEVATTAS+F+ TKRISPLI SS + KS R  SFS SSLRT PLSTNFLIPF GGSVSGD
Sbjct: 1   MEVATTASTFSLTKRISPLIASSHHRKSTRTMSFSPSSLRTKPLSTNFLIPFVGGSVSGD 60

Query: 61  FSGVKLRPSLLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSG+KLRPS LNPDS RGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGLKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKIIMSACIFQGGEKLGYETEAFAIY 180
           LVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTK         GGEKLGYETEAFA+Y
Sbjct: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK---------GGEKLGYETEAFAVY 180

Query: 181 DVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQANDIEL 240
           DVMRY+KPPIFTLCVGNAWGEA+LLL+AGA+GNRSALPSSTIM+KQPIARFQGQA D+EL
Sbjct: 181 DVMRYIKPPIFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVEL 240

Query: 241 ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKSFSPSEAVEYGIIDKVLYNERTTED 300
           ARKE+RNVK ELVKLYAKHIGKS EEIEADIRRPK FSPSEAVEYGIIDKV+YNER+TED
Sbjct: 241 ARKEIRNVKVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTED 300

Query: 301 RGVVSDLKKAQLI 314
           RGVVSDLKKAQLI
Sbjct: 301 RGVVSDLKKAQLI 304

[Close]

BLAST of HG10003088 vs. ExPASy Swiss-Prot
Match: Q8LB10 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR4 PE=1 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 6.6e-120
Identity = 233/315 (73.97%), Postives = 260/315 (82.54%), Query Frame = 0


Query: 1   MEV-ATTASSFAFTK-RISPLITSSDNGKSNRIFSFSSSSLRTAPLSTNFLIPFAGGSVS 60
           MEV A TA+SF   + R S +I SS     ++    SSSSLR A LS  FL P+ GGS+S
Sbjct: 1   MEVAAATATSFTTLRARTSAIIPSSTRNLRSKPRFSSSSSLR-ASLSNGFLSPYTGGSIS 60

Query: 61  GDFSGVKLRPSLLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLG 120
            D  G KLR   LNP +   SK KRGVVTMVIPFS+GSA EQPPPDLASYL+KNRIVYLG
Sbjct: 61  SDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLG 120

Query: 121 MSLVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKIIMSACIFQGGEKLGYETEAFA 180
           MSLVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTK          GEKLGY+TEAFA
Sbjct: 121 MSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK---------NGEKLGYDTEAFA 180

Query: 181 IYDVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQANDI 240
           IYDVM YVKPPIFTLCVGNAWGEAALLL AGA+GNRSALPSSTIMIKQPIARFQGQA D+
Sbjct: 181 IYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQATDV 240

Query: 241 ELARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKSFSPSEAVEYGIIDKVLYNERTT 300
           E+ARKE++++K E+VKLY+KHIGKS E+IEAD++RPK FSP+EAVEYGIIDKV+YNER +
Sbjct: 241 EIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGS 300

Query: 301 EDRGVVSDLKKAQLI 314
           +DRGVVSDLKKAQLI
Sbjct: 301 QDRGVVSDLKKAQLI 305

[Close]

BLAST of HG10003088 vs. ExPASy Swiss-Prot
Match: Q9L4P4 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=clpR PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.0e-47
Identity = 96/212 (45.28%), Postives = 140/212 (66.04%), Query Frame = 0


Query: 91  PFSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPS----------VTELILAEFLYLQYED 150
           P+    ++  PPPDL S L K RI+YLGM L  S          VTELI+A+ LYL++++
Sbjct: 11  PYYGDVSYRTPPPDLPSLLLKERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDN 70

Query: 151 EAKPIYLYINSTGTTKIIMSACIFQGGEKLGYETEAFAIYDVMRYVKPPIFTLCVGNAWG 210
             KPIY YINSTGT+        +  G+ +GYETEAFAI D MRY+KPP+ T+C+G A G
Sbjct: 71  PEKPIYFYINSTGTS--------WYTGDAIGYETEAFAICDTMRYIKPPVHTICIGQAMG 130

Query: 211 EAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQANDIELARKEVRNVKAELVKLYAKHI 270
            AA++L+ G  GNR++LP +TI++ QP    QGQA+DI++  KEV   K  +++++A++ 
Sbjct: 131 TAAMILSGGTPGNRASLPHATIVLNQPRTGAQGQASDIQIRAKEVLANKRTMLEIFARNT 190

Query: 271 GKSTEEIEADIRRPKSFSPSEAVEYGIIDKVL 293
           G+  + +  D  R    +P++AVEYG+ID+VL
Sbjct: 191 GQDPDRLARDTDRMLYMTPAQAVEYGLIDRVL 214

[Close]

BLAST of HG10003088 vs. ExPASy Swiss-Prot
Match: P74466 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=clpR PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 7.7e-44
Identity = 92/206 (44.66%), Postives = 138/206 (66.99%), Query Frame = 0


Query: 97  AWEQPPPDLASYLYKNRIVYLGMSLVPS----------VTELILAEFLYLQYEDEAKPIY 156
           A++ PPPDL S L K RIVYLGM L  S          VT+LI+A+ LYLQ++D  KPIY
Sbjct: 15  AFKTPPPDLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIY 74

Query: 157 LYINSTGTTKIIMSACIFQGGEKLGYETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLL 216
            YINSTGT+        +  G+ +G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L
Sbjct: 75  FYINSTGTS--------WYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMIL 134

Query: 217 AAGAQGNRSALPSSTIMIKQPIARFQGQANDIELARKEVRNVKAELVKLYAKHIGKSTEE 276
           ++G +G R++LP +TI++ Q     QGQA DI++  KEV + K  ++++ + + G++ E+
Sbjct: 135 SSGTKGYRASLPHATIVLNQNRTGAQGQATDIQIRAKEVISNKQTMLEILSLNTGQTQEK 194

Query: 277 IEADIRRPKSFSPSEAVEYGIIDKVL 293
           +  D+ R    +P++A EYG+ID+VL
Sbjct: 195 LAKDMDRTFYLTPAQAKEYGLIDRVL 212

[Close]

BLAST of HG10003088 vs. ExPASy Swiss-Prot
Match: Q7NEW1 (ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.1e-41
Identity = 92/201 (45.77%), Postives = 123/201 (61.19%), Query Frame = 0


Query: 92  FSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEAKPIYLYINS 151
           +S    +  PPPDL S L   RIVYLG  +   V EL++A+ LYL+ ED AKPI +YINS
Sbjct: 16  YSGDYGFRTPPPDLPSLLLNERIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINS 75

Query: 152 TGTTKIIMSACIFQGGEKLGYETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLAAGAQ 211
            G                 G+ET AFA+YD MR+V+ PI T+C+G A G +ALL+AAG +
Sbjct: 76  PGVA---------------GFETSAFAVYDTMRHVRMPIKTICLGLAGGFSALLMAAGTK 135

Query: 212 GNRSALPSSTIMIKQPIARFQGQANDIELARKEVRNVKAELVKLYAKHIGKSTEEIEADI 271
           G R +LP+S I++ QP    +GQA DI +  +E+   K  L +L + H GK+ E+I+ D 
Sbjct: 136 GQRMSLPNSRIILYQPYGGARGQATDINIRAQELLTTKRTLNQLLSIHTGKTVEQIDKDT 195

Query: 272 RRPKSFSPSEAVEYGIIDKVL 293
            R    SP EAV YG+IDKVL
Sbjct: 196 ERLFYMSPQEAVSYGLIDKVL 201

[Close]

BLAST of HG10003088 vs. ExPASy Swiss-Prot
Match: Q8L770 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR3 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.8e-40
Identity = 90/195 (46.15%), Postives = 125/195 (64.10%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKIIMS 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D  +PIY+YINSTGTT+    
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTR---- 177

Query: 161 ACIFQGGEKLGYETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSS 220
                 GE +G E+E FAIYD +  +K  + T+CVG A G+A LLL+AG +G R  +P +
Sbjct: 178 ----DDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHA 237

Query: 221 TIMIKQPIARFQG--QANDIELARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKSFS 280
             MI+QP     G   A+D+ +  KEV   +  LV+L +KH G S E +   +RRP    
Sbjct: 238 KAMIQQPRVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMD 297

Query: 281 PSEAVEYGIIDKVLY 294
             +A E+G+ID++L+
Sbjct: 298 APKAKEFGVIDRILW 304

[Close]

BLAST of HG10003088 vs. ExPASy TrEMBL
Match: A0A6J1DRW9 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111022646 PE=3 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.5e-151
Identity = 286/313 (91.37%), Postives = 291/313 (92.97%), Query Frame = 0


Query: 1   MEVATTASSFAFTKRISPLITSSDNGKSNRIFSFSSSSLRTAPLSTNFLIPFAGGSVSGD 60
           MEVATTAS+FA TKRISP ITSS N KSNR  SFSSSSLR  PLSTNFL PFAGGSVSGD
Sbjct: 1   MEVATTASTFALTKRISPSITSSHNPKSNRALSFSSSSLRPTPLSTNFLAPFAGGSVSGD 60

Query: 61  FSGVKLRPSLLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           F+GVKLRPS LNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FAGVKLRPSSLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKIIMSACIFQGGEKLGYETEAFAIY 180
           LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTK         GGEKLGYETEAFAIY
Sbjct: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTK---------GGEKLGYETEAFAIY 180

Query: 181 DVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQANDIEL 240
           DVMRYVKPPIFTLCVGNAWGEAALLLAAGA+GNRSALPSSTIM+KQPIARFQGQA DIEL
Sbjct: 181 DVMRYVKPPIFTLCVGNAWGEAALLLAAGARGNRSALPSSTIMMKQPIARFQGQATDIEL 240

Query: 241 ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKSFSPSEAVEYGIIDKVLYNERTTED 300
           ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPK FSPSEAVEYGIIDKVLYNER+ ED
Sbjct: 241 ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERSPED 300

Query: 301 RGVVSDLKKAQLI 314
           RGVVSDLKKAQLI
Sbjct: 301 RGVVSDLKKAQLI 304

[Close]

BLAST of HG10003088 vs. ExPASy TrEMBL
Match: A0A5A7THF6 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00710 PE=3 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 6.4e-150
Identity = 282/313 (90.10%), Postives = 289/313 (92.33%), Query Frame = 0


Query: 1   MEVATTASSFAFTKRISPLITSSDNGKSNRIFSFSSSSLRTAPLSTNFLIPFAGGSVSGD 60
           MEVATTASSFA TKRISPL  SS+ GKSNR  S SSSS+RTAPLSTNFLIPFAGGSVSGD
Sbjct: 1   MEVATTASSFALTKRISPLFASSNYGKSNRTLSLSSSSVRTAPLSTNFLIPFAGGSVSGD 60

Query: 61  FSGVKLRPSLLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRP  LNP+   GSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPYSLNPNCFPGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKIIMSACIFQGGEKLGYETEAFAIY 180
           LVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTK         GGEKLGYETEAFAIY
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYINSTGTTK---------GGEKLGYETEAFAIY 180

Query: 181 DVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQANDIEL 240
           DVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQA D+EL
Sbjct: 181 DVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDVEL 240

Query: 241 ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKSFSPSEAVEYGIIDKVLYNERTTED 300
           ARKEVRNVKAELVKL+AKH+GKSTEEIEADIRRPK F+PSEAVEYGIIDKVLYNERTTED
Sbjct: 241 ARKEVRNVKAELVKLFAKHVGKSTEEIEADIRRPKYFTPSEAVEYGIIDKVLYNERTTED 300

Query: 301 RGVVSDLKKAQLI 314
           RGVVSDLKKAQLI
Sbjct: 301 RGVVSDLKKAQLI 304

[Close]

BLAST of HG10003088 vs. ExPASy TrEMBL
Match: A0A1S3BJW8 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103490843 PE=3 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 6.4e-150
Identity = 282/313 (90.10%), Postives = 289/313 (92.33%), Query Frame = 0


Query: 1   MEVATTASSFAFTKRISPLITSSDNGKSNRIFSFSSSSLRTAPLSTNFLIPFAGGSVSGD 60
           MEVATTASSFA TKRISPL  SS+ GKSNR  S SSSS+RTAPLSTNFLIPFAGGSVSGD
Sbjct: 1   MEVATTASSFALTKRISPLFASSNYGKSNRTLSLSSSSVRTAPLSTNFLIPFAGGSVSGD 60

Query: 61  FSGVKLRPSLLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRP  LNP+   GSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPYSLNPNCFPGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKIIMSACIFQGGEKLGYETEAFAIY 180
           LVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTK         GGEKLGYETEAFAIY
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYINSTGTTK---------GGEKLGYETEAFAIY 180

Query: 181 DVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQANDIEL 240
           DVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQA D+EL
Sbjct: 181 DVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQATDVEL 240

Query: 241 ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKSFSPSEAVEYGIIDKVLYNERTTED 300
           ARKEVRNVKAELVKL+AKH+GKSTEEIEADIRRPK F+PSEAVEYGIIDKVLYNERTTED
Sbjct: 241 ARKEVRNVKAELVKLFAKHVGKSTEEIEADIRRPKYFTPSEAVEYGIIDKVLYNERTTED 300

Query: 301 RGVVSDLKKAQLI 314
           RGVVSDLKKAQLI
Sbjct: 301 RGVVSDLKKAQLI 304

[Close]

BLAST of HG10003088 vs. ExPASy TrEMBL
Match: A0A0A0L232 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_3G017170 PE=3 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.4e-149
Identity = 280/313 (89.46%), Postives = 289/313 (92.33%), Query Frame = 0


Query: 1   MEVATTASSFAFTKRISPLITSSDNGKSNRIFSFSSSSLRTAPLSTNFLIPFAGGSVSGD 60
           MEVATTASSFA TKRISPLITSS NGKSNR  S SSSS+R APLSTNFLIPFAGGSVSG+
Sbjct: 1   MEVATTASSFALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSGE 60

Query: 61  FSGVKLRPSLLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSGVKLRPS LNP+ S GSKGKRGVVTMVIPF+RGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKIIMSACIFQGGEKLGYETEAFAIY 180
           LVPSVTELILAEFLYLQYEDE KPIYLY+NSTGTTK         GGEKLGYETEAFA+Y
Sbjct: 121 LVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTK---------GGEKLGYETEAFAVY 180

Query: 181 DVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQANDIEL 240
           DVM YVKPPIFTLCVGNAWGEAALLLAAGA GNRSALPSSTIMIK+PIARFQGQA D+E+
Sbjct: 181 DVMSYVKPPIFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEI 240

Query: 241 ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKSFSPSEAVEYGIIDKVLYNERTTED 300
           ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPK FSPSEAVEYGIIDKVLYNER TED
Sbjct: 241 ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATED 300

Query: 301 RGVVSDLKKAQLI 314
           RGVVSDLKKAQLI
Sbjct: 301 RGVVSDLKKAQLI 304

[Close]

BLAST of HG10003088 vs. ExPASy TrEMBL
Match: A0A6J1F8U0 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111441877 PE=3 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 5.1e-147
Identity = 273/313 (87.22%), Postives = 287/313 (91.69%), Query Frame = 0


Query: 1   MEVATTASSFAFTKRISPLITSSDNGKSNRIFSFSSSSLRTAPLSTNFLIPFAGGSVSGD 60
           MEVATTAS+F+ TKRISPLI SS + KS R  SFS SSLRT PLSTNFLIPF GGSVSGD
Sbjct: 1   MEVATTASTFSLTKRISPLIASSHHRKSTRTMSFSPSSLRTKPLSTNFLIPFVGGSVSGD 60

Query: 61  FSGVKLRPSLLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120
           FSG+KLRPS LNPDS RGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS
Sbjct: 61  FSGLKLRPSSLNPDSFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMS 120

Query: 121 LVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKIIMSACIFQGGEKLGYETEAFAIY 180
           LVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTK         GGEKLGYETEAFA+Y
Sbjct: 121 LVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK---------GGEKLGYETEAFAVY 180

Query: 181 DVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQANDIEL 240
           DVMRY+KPPIFTLCVGNAWGEA+LLL+AGA+GNRSALPSSTIM+KQPIARFQGQA D+EL
Sbjct: 181 DVMRYIKPPIFTLCVGNAWGEASLLLSAGAKGNRSALPSSTIMMKQPIARFQGQATDVEL 240

Query: 241 ARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKSFSPSEAVEYGIIDKVLYNERTTED 300
           ARKE+RNVK ELVKLYAKHIGKS EEIEADIRRPK FSPSEAVEYGIIDKV+YNER+TED
Sbjct: 241 ARKEIRNVKVELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVIYNERSTED 300

Query: 301 RGVVSDLKKAQLI 314
           RGVVSDLKKAQLI
Sbjct: 301 RGVVSDLKKAQLI 304

[Close]

BLAST of HG10003088 vs. TAIR 10
Match: AT4G17040.1 (CLP protease R subunit 4 )

HSP 1 Score: 431.8 bits (1109), Expect = 4.7e-121
Identity = 233/315 (73.97%), Postives = 260/315 (82.54%), Query Frame = 0


Query: 1   MEV-ATTASSFAFTK-RISPLITSSDNGKSNRIFSFSSSSLRTAPLSTNFLIPFAGGSVS 60
           MEV A TA+SF   + R S +I SS     ++    SSSSLR A LS  FL P+ GGS+S
Sbjct: 1   MEVAAATATSFTTLRARTSAIIPSSTRNLRSKPRFSSSSSLR-ASLSNGFLSPYTGGSIS 60

Query: 61  GDFSGVKLRPSLLNPDSSRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLG 120
            D  G KLR   LNP +   SK KRGVVTMVIPFS+GSA EQPPPDLASYL+KNRIVYLG
Sbjct: 61  SDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLG 120

Query: 121 MSLVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKIIMSACIFQGGEKLGYETEAFA 180
           MSLVPSVTELILAEFLYLQYEDE KPIYLYINSTGTTK          GEKLGY+TEAFA
Sbjct: 121 MSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK---------NGEKLGYDTEAFA 180

Query: 181 IYDVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSSTIMIKQPIARFQGQANDI 240
           IYDVM YVKPPIFTLCVGNAWGEAALLL AGA+GNRSALPSSTIMIKQPIARFQGQA D+
Sbjct: 181 IYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQATDV 240

Query: 241 ELARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKSFSPSEAVEYGIIDKVLYNERTT 300
           E+ARKE++++K E+VKLY+KHIGKS E+IEAD++RPK FSP+EAVEYGIIDKV+YNER +
Sbjct: 241 EIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGS 300

Query: 301 EDRGVVSDLKKAQLI 314
           +DRGVVSDLKKAQLI
Sbjct: 301 QDRGVVSDLKKAQLI 305

[Close]

BLAST of HG10003088 vs. TAIR 10
Match: AT1G09130.1 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 167.9 bits (424), Expect = 1.3e-41
Identity = 90/195 (46.15%), Postives = 125/195 (64.10%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKIIMS 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D  +PIY+YINSTGTT+    
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTR---- 177

Query: 161 ACIFQGGEKLGYETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSS 220
                 GE +G E+E FAIYD +  +K  + T+CVG A G+A LLL+AG +G R  +P +
Sbjct: 178 ----DDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHA 237

Query: 221 TIMIKQPIARFQG--QANDIELARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKSFS 280
             MI+QP     G   A+D+ +  KEV   +  LV+L +KH G S E +   +RRP    
Sbjct: 238 KAMIQQPRVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMD 297

Query: 281 PSEAVEYGIIDKVLY 294
             +A E+G+ID++L+
Sbjct: 298 APKAKEFGVIDRILW 304

[Close]

BLAST of HG10003088 vs. TAIR 10
Match: AT1G09130.2 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 167.9 bits (424), Expect = 1.3e-41
Identity = 90/195 (46.15%), Postives = 125/195 (64.10%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKIIMS 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D  +PIY+YINSTGTT+    
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTR---- 177

Query: 161 ACIFQGGEKLGYETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSS 220
                 GE +G E+E FAIYD +  +K  + T+CVG A G+A LLL+AG +G R  +P +
Sbjct: 178 ----DDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHA 237

Query: 221 TIMIKQPIARFQG--QANDIELARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKSFS 280
             MI+QP     G   A+D+ +  KEV   +  LV+L +KH G S E +   +RRP    
Sbjct: 238 KAMIQQPRVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMD 297

Query: 281 PSEAVEYGIIDKVLY 294
             +A E+G+ID++L+
Sbjct: 298 APKAKEFGVIDRILW 304

[Close]

BLAST of HG10003088 vs. TAIR 10
Match: AT1G09130.3 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 167.9 bits (424), Expect = 1.3e-41
Identity = 90/195 (46.15%), Postives = 125/195 (64.10%), Query Frame = 0


Query: 101 PPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEAKPIYLYINSTGTTKIIMS 160
           PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D  +PIY+YINSTGTT+    
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTR---- 177

Query: 161 ACIFQGGEKLGYETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLAAGAQGNRSALPSS 220
                 GE +G E+E FAIYD +  +K  + T+CVG A G+A LLL+AG +G R  +P +
Sbjct: 178 ----DDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHA 237

Query: 221 TIMIKQPIARFQG--QANDIELARKEVRNVKAELVKLYAKHIGKSTEEIEADIRRPKSFS 280
             MI+QP     G   A+D+ +  KEV   +  LV+L +KH G S E +   +RRP    
Sbjct: 238 KAMIQQPRVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMD 297

Query: 281 PSEAVEYGIIDKVLY 294
             +A E+G+ID++L+
Sbjct: 298 APKAKEFGVIDRILW 304

[Close]

BLAST of HG10003088 vs. TAIR 10
Match: AT1G49970.1 (CLP protease proteolytic subunit 1 )

HSP 1 Score: 152.5 bits (384), Expect = 5.5e-37
Identity = 88/201 (43.78%), Postives = 122/201 (60.70%), Query Frame = 0


Query: 95  GSAWEQP---PPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEAKPIYLYINS 154
           G   E+P   PPDL S L   RI YLGM +VP+VTEL++A+F++L Y++  KPIYLYINS
Sbjct: 159 GGGSERPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINS 218

Query: 155 TGTTKIIMSACIFQGGEKLGYETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLAAGAQ 214
            GT    M        E +G ETEA+AI D + Y K  ++T+  G A+G+AA+LL+ G +
Sbjct: 219 PGTQNEKM--------ETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKK 278

Query: 215 GNRSALP-SSTIMIKQPIARFQGQANDIELARKEVRNVKAELVKLYAKHIGKSTEEIEAD 274
           G R+  P SST +    + R  G A D+ +  KE+       ++L AK  GKS E+I  D
Sbjct: 279 GYRAVQPHSSTKLYLPKVNRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINED 338

Query: 275 IRRPKSFSPSEAVEYGIIDKV 292
           I+RPK      A++YGI DK+
Sbjct: 339 IKRPKYLQAQAAIDYGIADKI 351

The following BLAST results are available for this feature:

BLAST of HG10003088 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902969.1	9.8e-153	92.97	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
XP_022155521.1	3.1e-151	91.37	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
XP_008448778.1	1.3e-149	90.10	PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 4, chl...	[more]
XP_004147236.1	2.9e-149	89.46	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
XP_022934823.1	1.0e-146	87.22	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]

BLAST of HG10003088 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB10	6.6e-120	73.97	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
Q9L4P4	2.0e-47	45.28	Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus el...	[more]
P74466	7.7e-44	44.66	Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp...	[more]
Q7NEW1	6.1e-41	45.77	ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter violaceus (strai...	[more]
Q8L770	1.8e-40	46.15	ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ...	[more]

BLAST of HG10003088 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DRW9	1.5e-151	91.37	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A5A7THF6	6.4e-150	90.10	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BJW8	6.4e-150	90.10	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0L232	1.4e-149	89.46	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A6J1F8U0	5.1e-147	87.22	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of HG10003088 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17040.1	4.7e-121	73.97	CLP protease R subunit 4	[more]
AT1G09130.1	1.3e-41	46.15	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G09130.2	1.3e-41	46.15	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G09130.3	1.3e-41	46.15	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G49970.1	5.5e-37	43.78	CLP protease proteolytic subunit 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 238..258
None	No IPR available	GENE3D	3.90.226.10		coord: 74..300 e-value: 9.5E-66 score: 223.3
None	No IPR available	PANTHER	PTHR10381:SF65	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 13..312
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 192..209 score: 48.06 coord: 213..232 score: 42.75 coord: 104..119 score: 40.62 coord: 270..289 score: 43.75
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 104..291 e-value: 7.52353E-67 score: 204.983
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 104..153 e-value: 2.4E-7 score: 30.8 coord: 174..293 e-value: 4.5E-39 score: 134.2
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 13..312
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 99..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10003088.1	HG10003088.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009368	endopeptidase Clp complex
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity