HG10003016 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10003016
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionglycine-rich cell wall structural protein 1.8-like
LocationChr11: 16398862 .. 16399629 (+)
RNA-Seq ExpressionHG10003016
SyntenyHG10003016
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATCTTTAGAACAACTTTGTCTTTTGGTTTTCTTTTGTTGGTGGGTTTAGGCTTAGCTTCGGCAGCCAGAACTCTTCTCTCCTATGATCCTCCACATCACTCTGGATATGACAATTATGATCATCCTGTAAATAACCCAAAAATAGGATACGAACGTGACCATCATGATGGACCTTATGGTGGCGGTGCTGGTGGAGGATATGGAGGCGGAGCTGGCTCATCTCTTGGAGGCTCTGGATATGGAAGTGGTGGAGGTGGAGGTAGTGGCTCTGGATATGCCGGTGTAGGAGATCATGGGGTTGGTTATGGTAGTGGTGGAGGAGGTGGATATGGAGCTGGAGTTGGCTCTGACCTTGGTGGTAGTGGATATGGAAGCGGTGGCGGGGGAGGAAGTGGTGGAGGATATGGTGATCTAGGAGGACGTGGAAAAGGTTATGGTAGCGGTGGTGGTGGAGGAAGTGGATATGGAGGTAGAGGAGATCATGGAGTTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGGTGGTGCAGGATATGGTCCAGGAGGAGACCACGGTGTAGGTTATGGAAGTGGAGGAGGAGGTGGGTCTGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGTGGTGGTGGTGGTGGCGGAGCAGGTTATGGTGGTGGAGCACATGGAAGTGGTGGTGGAGCTGGAAGTGGCTACGGCGGCAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA

mRNA sequence

ATGGCTATCTTTAGAACAACTTTGTCTTTTGGTTTTCTTTTGTTGGTGGGTTTAGGCTTAGCTTCGGCAGCCAGAACTCTTCTCTCCTATGATCCTCCACATCACTCTGGATATGACAATTATGATCATCCTGTAAATAACCCAAAAATAGGATACGAACGTGACCATCATGATGGACCTTATGGTGGCGGTGCTGGTGGAGGATATGGAGGCGGAGCTGGCTCATCTCTTGGAGGCTCTGGATATGGAAGTGGTGGAGGTGGAGGTAGTGGCTCTGGATATGCCGGTGTAGGAGATCATGGGGTTGGTTATGGTAGTGGTGGAGGAGGTGGATATGGAGCTGGAGTTGGCTCTGACCTTGGTGGTAGTGGATATGGAAGCGGTGGCGGGGGAGGAAGTGGTGGAGGATATGGTGATCTAGGAGGACGTGGAAAAGGTTATGGTAGCGGTGGTGGTGGAGGAAGTGGATATGGAGGTAGAGGAGATCATGGAGTTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGGTGGTGCAGGATATGGTCCAGGAGGAGACCACGGTGTAGGTTATGGAAGTGGAGGAGGAGGTGGGTCTGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGTGGTGGTGGTGGTGGCGGAGCAGGTTATGGTGGTGGAGCACATGGAAGTGGTGGTGGAGCTGGAAGTGGCTACGGCGGCAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA

Coding sequence (CDS)

ATGGCTATCTTTAGAACAACTTTGTCTTTTGGTTTTCTTTTGTTGGTGGGTTTAGGCTTAGCTTCGGCAGCCAGAACTCTTCTCTCCTATGATCCTCCACATCACTCTGGATATGACAATTATGATCATCCTGTAAATAACCCAAAAATAGGATACGAACGTGACCATCATGATGGACCTTATGGTGGCGGTGCTGGTGGAGGATATGGAGGCGGAGCTGGCTCATCTCTTGGAGGCTCTGGATATGGAAGTGGTGGAGGTGGAGGTAGTGGCTCTGGATATGCCGGTGTAGGAGATCATGGGGTTGGTTATGGTAGTGGTGGAGGAGGTGGATATGGAGCTGGAGTTGGCTCTGACCTTGGTGGTAGTGGATATGGAAGCGGTGGCGGGGGAGGAAGTGGTGGAGGATATGGTGATCTAGGAGGACGTGGAAAAGGTTATGGTAGCGGTGGTGGTGGAGGAAGTGGATATGGAGGTAGAGGAGATCATGGAGTTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGGTGGTGCAGGATATGGTCCAGGAGGAGACCACGGTGTAGGTTATGGAAGTGGAGGAGGAGGTGGGTCTGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGTGGTGGTGGTGGTGGCGGAGCAGGTTATGGTGGTGGAGCACATGGAAGTGGTGGTGGAGCTGGAAGTGGCTACGGCGGCAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA

Protein sequence

MAIFRTTLSFGFLLLVGLGLASAARTLLSYDPPHHSGYDNYDHPVNNPKIGYERDHHDGPYGGGAGGGYGGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSGGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGGGAGYGGGAHGSGGGAGSGYGGSGEEGGYDGGYAP
Homology
BLAST of HG10003016 vs. NCBI nr
Match: XP_038905926.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])

HSP 1 Score: 322.8 bits (826), Expect = 2.7e-84
Identity = 240/256 (93.75%), Postives = 243/256 (94.92%), Query Frame = 0

Query: 1   MAIFRTTLSFGFLLLVGLGLASAARTLLSYD-PPHHSGYDNYDHPVNNPKIGYERDHHDG 60
           MAI R TLSFGFLLLVGLGLASA R LLSYD PPH SGYDNYDHPV+NPK+GYERDHHDG
Sbjct: 9   MAILR-TLSFGFLLLVGLGLASATRALLSYDIPPHRSGYDNYDHPVHNPKVGYERDHHDG 68

Query: 61  PYGGGAGGGYGGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSGGGGGYGAGVGSD 120
           PYGGGAGGGYGGGAGSSLGGSGYGSGGGG  GSGYAG GDHGVGYGSGGGGGYGAGVGSD
Sbjct: 69  PYGGGAGGGYGGGAGSSLGGSGYGSGGGG--GSGYAGAGDHGVGYGSGGGGGYGAGVGSD 128

Query: 121 LGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGG 180
           LGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGG
Sbjct: 129 LGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGG 188

Query: 181 GAGYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGGGAGYGGGAHGSGGGAGSG 240
           GAGYGPG +HGVGYGSGGGGGSGSGYGGSKGYGGGS  GGGGGAGYGGGAHGSGGGAGSG
Sbjct: 189 GAGYGPGVEHGVGYGSGGGGGSGSGYGGSKGYGGGS--GGGGGAGYGGGAHGSGGGAGSG 248

Query: 241 YGGSGEEGGYDGGYAP 256
           YGGSGEEGGYDGGYAP
Sbjct: 249 YGGSGEEGGYDGGYAP 259

BLAST of HG10003016 vs. NCBI nr
Match: XP_038903617.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])

HSP 1 Score: 296.6 bits (758), Expect = 2.1e-76
Identity = 231/260 (88.85%), Postives = 235/260 (90.38%), Query Frame = 0

Query: 1   MAIFRTTLSFGFLLLVGLGLASAARTLLSYD-PPHHSGYDNYDHPVNNPKIGYERDHHDG 60
           M IFR  LSFG LLLVGLGLASA RTLLSYD PPH SGYDNYDHPV+NPK+GYERDHHDG
Sbjct: 1   MDIFR-NLSFGLLLLVGLGLASATRTLLSYDIPPHRSGYDNYDHPVHNPKVGYERDHHDG 60

Query: 61  PYGGGAGGGYGGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSGGGGGYGAGVGSD 120
           PYGGGA GGYGGGAGSSLGGSGYGSGGGG  GSGY GVGDHGVGYGSGGGGGYGAGVGSD
Sbjct: 61  PYGGGAAGGYGGGAGSSLGGSGYGSGGGG--GSGYTGVGDHGVGYGSGGGGGYGAGVGSD 120

Query: 121 LGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGG 180
           LGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGY GRGDHGVGYGSGGGGGYGSGG
Sbjct: 121 LGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYEGRGDHGVGYGSGGGGGYGSGG 180

Query: 181 GAGYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGGGAGYGGGAH----GSGGG 240
           G  +GPG  HG+GYGSGGGGGSG GYGGSKGY GGS  GGGGGAGYGGGAH    GSGGG
Sbjct: 181 GVEHGPGVGHGIGYGSGGGGGSGGGYGGSKGYEGGS--GGGGGAGYGGGAHGSGYGSGGG 240

Query: 241 AGSGYGGSGEEGGYDGGYAP 256
           AGSGYGGSGEEGGYDGGYAP
Sbjct: 241 AGSGYGGSGEEGGYDGGYAP 255

BLAST of HG10003016 vs. NCBI nr
Match: XP_011650342.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus])

HSP 1 Score: 265.4 bits (677), Expect = 5.1e-67
Identity = 226/268 (84.33%), Postives = 232/268 (86.57%), Query Frame = 0

Query: 1   MAIFRTTLSFGFLLLVGLGLASAARTLLSYD-PPHHSGYDNYDHPVNNPKIGYE------ 60
           MAI + TLSFGFLLLV LGLASAAR+LLSYD PPH SGYDNYDHPV NPK+GYE      
Sbjct: 1   MAISK-TLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDG 60

Query: 61  ----RDHHDGPYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSG 120
               RDHHD PYGGGAGGGY  G GAGSSLGGSGYGSGGGG  GSGY GVG+H VGYGSG
Sbjct: 61  YYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGG--GSGYGGVGNHEVGYGSG 120

Query: 121 GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180
           GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY
Sbjct: 121 GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180

Query: 181 GSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGGGAGYGG 240
           GSGGGGGYGSG G G G   DHGVGYGSGGGGG+GSGYGGSKGYGGGS  GGGGGAGYGG
Sbjct: 181 GSGGGGGYGSGVGGGAGV-VDHGVGYGSGGGGGAGSGYGGSKGYGGGS--GGGGGAGYGG 240

Query: 241 GAHGSGGGAGSGYGGSGEEGGYDGGYAP 256
           GAHGSG G+G G  GSGEEGGYDGGYAP
Sbjct: 241 GAHGSGYGSGGG-AGSGEEGGYDGGYAP 261

BLAST of HG10003016 vs. NCBI nr
Match: BAA34064.1 (glycine-rich protein-2, partial [Cucumis sativus])

HSP 1 Score: 264.2 bits (674), Expect = 1.1e-66
Identity = 225/268 (83.96%), Postives = 232/268 (86.57%), Query Frame = 0

Query: 1   MAIFRTTLSFGFLLLVGLGLASAARTLLSYD-PPHHSGYDNYDHPVNNPKIGYE------ 60
           MAI + TLSFGFLLLV LGLASAAR+LLSYD PPH SGYDNYDHPV NPK+GYE      
Sbjct: 1   MAISK-TLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDG 60

Query: 61  ----RDHHDGPYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSG 120
               RDHHD PYGGGAGGGY  G GAGSSLGGSGYGSGGGG  GSGY GVG+H VGYGSG
Sbjct: 61  YYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGG--GSGYGGVGNHEVGYGSG 120

Query: 121 GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180
           GGGGYGAGVGSDLGGSGYGSGGGGG+GGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY
Sbjct: 121 GGGGYGAGVGSDLGGSGYGSGGGGGTGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180

Query: 181 GSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGGGAGYGG 240
           GSGGGGGYGSG G G G   DHGVGYGSGGGGG+GSGYGGSKGYGGGS  GGGGGAGYGG
Sbjct: 181 GSGGGGGYGSGVGGGAGV-VDHGVGYGSGGGGGAGSGYGGSKGYGGGS--GGGGGAGYGG 240

Query: 241 GAHGSGGGAGSGYGGSGEEGGYDGGYAP 256
           GAHGSG G+G G  GSGEEGGYDGGYAP
Sbjct: 241 GAHGSGYGSGGG-AGSGEEGGYDGGYAP 261

BLAST of HG10003016 vs. NCBI nr
Match: KAE8650021.1 (hypothetical protein Csa_010076 [Cucumis sativus])

HSP 1 Score: 257.7 bits (657), Expect = 1.1e-64
Identity = 231/299 (77.26%), Postives = 237/299 (79.26%), Query Frame = 0

Query: 1   MAIFRTTLSFGFLLLVGLGLASAARTLLSYD-PPHHSGYDNYDHPVNNPKIGYE------ 60
           MAI + TLSFGFLLLV LGLASAAR+LLSYD PPH SGYDNYDHPV NPK+GYE      
Sbjct: 1   MAISK-TLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDG 60

Query: 61  ----RDHHDGPYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSG 120
               RDHHD PYGGGAGGGY  G GAGSSLGGSGYGSGGGG  GSGY GVG+H VGYGSG
Sbjct: 61  YYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGG--GSGYGGVGNHEVGYGSG 120

Query: 121 GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180
           GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY
Sbjct: 121 GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180

Query: 181 GSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGG-------- 240
           GSGGGGGYGSG G G G   DHGVGYGSGGGGG+GSGYGGSKGYGGGSGGGG        
Sbjct: 181 GSGGGGGYGSGVGGGAGV-VDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGA 240

Query: 241 -----------------GGGAGYGGGA----HGSGGGA--GSGYGGSGEEGGYDGGYAP 256
                            GGGAGY GGA    +GSGGGA  GSGYGGSGEEGGYDGGYAP
Sbjct: 241 HGSGYGSGGGAGSGSGVGGGAGYSGGASGSGYGSGGGAGSGSGYGGSGEEGGYDGGYAP 295

BLAST of HG10003016 vs. ExPASy Swiss-Prot
Match: P10496 (Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05
Identity = 143/303 (47.19%), Postives = 164/303 (54.13%), Query Frame = 0

Query: 1   MAIFRTTLSFGFLLLVGLGLASAARTLLSYDPPHHSG-------------YDNYDHPVNN 60
           MA      S  FL+L+ LG+ SA R LL+ D  +  G             Y       + 
Sbjct: 1   MATIHRLPSLVFLVLLALGVCSARRALLTLDAGYGLGHGTGGGYGGAAGSYGGGGGGGSG 60

Query: 61  PKIGYERDHHDGPYGGGAGG--------------GYGGGAGSSLGG----------SGYG 120
              GY  +H    YGGG+GG              GYGGG GS  GG           GYG
Sbjct: 61  GGGGYAGEHGVVGYGGGSGGGQGGGVGYGGDQGAGYGGGGGSGGGGGVAYGGGGERGGYG 120

Query: 121 SGGGGGSGSGYAGVGDHGVGYGSGGGGGYGAGVGSDLGGS---GYGSGGG-GGSGGGYGD 180
            G GGG+G GY   G+HG+GYG GGG G G G G + GG+   GYG+GGG GG GGG GD
Sbjct: 121 GGQGGGAGGGYGAGGEHGIGYGGGGGSGAGGGGGYNAGGAQGGGYGTGGGAGGGGGGGGD 180

Query: 181 L-GGRGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGGGAGYGPGGDHGVGYGSGGG 240
             GG G G G+GGG G GYGG G+H    G GGGGG G G G GYG GG+HG G G G G
Sbjct: 181 HGGGYGGGQGAGGGAGGGYGGGGEH----GGGGGGGQGGGAGGGYGAGGEHGGGAGGGQG 240

Query: 241 GGSGSGYGGSKGYGGGSGGGGGGGAG--------YGGGA-HGSGGGAGSGYGGSGEEGGY 253
           GG+G GYG    +GGG+GGG GGGAG        +GGGA  G GGGAG GYG  GE GG 
Sbjct: 241 GGAGGGYGAGGEHGGGAGGGQGGGAGGGYGAGGEHGGGAGGGQGGGAGGGYGAGGEHGGG 299

BLAST of HG10003016 vs. ExPASy TrEMBL
Match: A0A0A0L1U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 2.5e-67
Identity = 226/268 (84.33%), Postives = 232/268 (86.57%), Query Frame = 0

Query: 1   MAIFRTTLSFGFLLLVGLGLASAARTLLSYD-PPHHSGYDNYDHPVNNPKIGYE------ 60
           MAI + TLSFGFLLLV LGLASAAR+LLSYD PPH SGYDNYDHPV NPK+GYE      
Sbjct: 1   MAISK-TLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDG 60

Query: 61  ----RDHHDGPYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSG 120
               RDHHD PYGGGAGGGY  G GAGSSLGGSGYGSGGGG  GSGY GVG+H VGYGSG
Sbjct: 61  YYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGG--GSGYGGVGNHEVGYGSG 120

Query: 121 GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180
           GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY
Sbjct: 121 GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180

Query: 181 GSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGGGAGYGG 240
           GSGGGGGYGSG G G G   DHGVGYGSGGGGG+GSGYGGSKGYGGGS  GGGGGAGYGG
Sbjct: 181 GSGGGGGYGSGVGGGAGV-VDHGVGYGSGGGGGAGSGYGGSKGYGGGS--GGGGGAGYGG 240

Query: 241 GAHGSGGGAGSGYGGSGEEGGYDGGYAP 256
           GAHGSG G+G G  GSGEEGGYDGGYAP
Sbjct: 241 GAHGSGYGSGGG-AGSGEEGGYDGGYAP 261

BLAST of HG10003016 vs. ExPASy TrEMBL
Match: Q9ZWM2 (Glycine-rich protein-2 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 5.5e-67
Identity = 225/268 (83.96%), Postives = 232/268 (86.57%), Query Frame = 0

Query: 1   MAIFRTTLSFGFLLLVGLGLASAARTLLSYD-PPHHSGYDNYDHPVNNPKIGYE------ 60
           MAI + TLSFGFLLLV LGLASAAR+LLSYD PPH SGYDNYDHPV NPK+GYE      
Sbjct: 1   MAISK-TLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDG 60

Query: 61  ----RDHHDGPYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSG 120
               RDHHD PYGGGAGGGY  G GAGSSLGGSGYGSGGGG  GSGY GVG+H VGYGSG
Sbjct: 61  YYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGG--GSGYGGVGNHEVGYGSG 120

Query: 121 GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180
           GGGGYGAGVGSDLGGSGYGSGGGGG+GGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY
Sbjct: 121 GGGGYGAGVGSDLGGSGYGSGGGGGTGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180

Query: 181 GSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGGGAGYGG 240
           GSGGGGGYGSG G G G   DHGVGYGSGGGGG+GSGYGGSKGYGGGS  GGGGGAGYGG
Sbjct: 181 GSGGGGGYGSGVGGGAGV-VDHGVGYGSGGGGGAGSGYGGSKGYGGGS--GGGGGAGYGG 240

Query: 241 GAHGSGGGAGSGYGGSGEEGGYDGGYAP 256
           GAHGSG G+G G  GSGEEGGYDGGYAP
Sbjct: 241 GAHGSGYGSGGG-AGSGEEGGYDGGYAP 261

BLAST of HG10003016 vs. ExPASy TrEMBL
Match: A0A1S3BJM7 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490774 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 2.0e-64
Identity = 225/271 (83.03%), Postives = 231/271 (85.24%), Query Frame = 0

Query: 1   MAIFRTTLSFGFLLLVGLGLASAARTLLSYD-PPHHSGYD-NYD-HPVNNPKIGYERDHH 60
           MAI + TLSFGFLLLV LGLASAAR+LL YD PPH SGYD NYD HPV NPK+GYE DHH
Sbjct: 1   MAISK-TLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHH 60

Query: 61  DG----------PYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYG 120
           DG          PYGGGAGGGY  GGGAGSSLGGSGYGSGGGG  GSGY GVG+HGVGYG
Sbjct: 61  DGYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGG--GSGYGGVGNHGVGYG 120

Query: 121 SGGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGV 180
           SGGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGYGGRGDHGV
Sbjct: 121 SGGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGV 180

Query: 181 GYGSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGGGAGY 240
           GYGSGGGGGYGSG G   G G DHGVGYGSGGGGG+G GYGGSKGYG GS  GGGGGAGY
Sbjct: 181 GYGSGGGGGYGSGVG---GAGVDHGVGYGSGGGGGAGGGYGGSKGYGAGS--GGGGGAGY 240

Query: 241 GGGAHGSGGGAGSGYG-GSGEEGGYDGGYAP 256
           GGGAHGSG G+G G G GSGEEGGYDGGYAP
Sbjct: 241 GGGAHGSGYGSGGGAGAGSGEEGGYDGGYAP 263

BLAST of HG10003016 vs. ExPASy TrEMBL
Match: A0A6J1CWP3 (glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014911 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 4.4e-56
Identity = 200/261 (76.63%), Postives = 215/261 (82.38%), Query Frame = 0

Query: 1   MAIFRTTLSFGFLLLVGLGLASAARTLLSYDPPHHSGYDNYDHPVNNPKIGYERDHHDGP 60
           MAI +   S  FLLL+G GLASAARTLL ++P  ++ YD         ++GY+RDHHDG 
Sbjct: 1   MAISK-AFSLSFLLLLGFGLASAARTLLGHEPDAYNPYDR--------RVGYDRDHHDGA 60

Query: 61  YGGGAGGGYGGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSGGGGGYGAGVGSDL 120
           YGGG+GGGYG GAGSSLGGSGYGSGGGGG GSGY G GDHGVGYGSGGGGGYG G+GS L
Sbjct: 61  YGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYGGAGDHGVGYGSGGGGGYGGGMGSGL 120

Query: 121 GGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGS--G 180
           GG+GYGSGGGGGSGGGYGD GGRGKGYGSGGGGGSGYGG GDHG GYGSGGGGGYGS  G
Sbjct: 121 GGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGG 180

Query: 181 GGAGYGPGGDHGVGYGSGGGGGSGSGYGGSK-GYGGGSGGGGGGGAGYG-----GGAHGS 240
           GGAGYGP G+HGVGYGSGGGGGSG GYGGSK GYGGGSGGG GGG GYG     GG +G 
Sbjct: 181 GGAGYGP-GEHGVGYGSGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGG 240

Query: 241 GGGAGSGYGGSGEEGGYDGGY 254
           GGG+G GYG SGEEGGYDGGY
Sbjct: 241 GGGSGGGYGSSGEEGGYDGGY 251

BLAST of HG10003016 vs. ExPASy TrEMBL
Match: A0A6J1KTC0 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 GN=LOC111498476 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.1e-50
Identity = 206/265 (77.74%), Postives = 216/265 (81.51%), Query Frame = 0

Query: 1   MAIFRTTLSFGFLLLVGLGLASAARTLLSYDPPHHS--GYDNYDHPVNNPKIGYERDHHD 60
           MAI + +LS  FLLL+GLGLASAARTLLSYDPPHHS  GY  Y H   NP++GY+ DHHD
Sbjct: 1   MAISK-SLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGY-GYQH---NPRVGYDHDHHD 60

Query: 61  GP---YGGGAGGGY--GGGAGSSLGGSGYGSGGGGGSGSGYAGVGD-HGVGYGSGGGGGY 120
           GP   YGGG+GGGY  G GAGS+LGGSGYGSGGGGG GSGYAGVGD  G GYGSGGGGG 
Sbjct: 61  GPYGAYGGGSGGGYGAGAGAGSALGGSGYGSGGGGGGGSGYAGVGDLGGSGYGSGGGGGS 120

Query: 121 GAGVGSDLG--GSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180
           G G G DLG  G GYGSGGGGGSG GYGDL G GKGYGSGGGGGSGYGG  DHGVGYGSG
Sbjct: 121 GVGYG-DLGGHGKGYGSGGGGGSGVGYGDLSGHGKGYGSGGGGGSGYGGGADHGVGYGSG 180

Query: 181 GGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGG-SKGYGGGSGGGGGGGAGYGGGA 240
           GGGGYG+GGGAGYGPGGDHGVGYGSGGGGGSG GYGG  KGYGGG  G GGG  G G   
Sbjct: 181 GGGGYGAGGGAGYGPGGDHGVGYGSGGGGGSGGGYGGRDKGYGGGPKGYGGGAKGSG--- 240

Query: 241 HGSGGGAGSGYGG-SGEEGGYDGGY 254
           +GSGGGAGSGYGG  GEEGGYDGGY
Sbjct: 241 YGSGGGAGSGYGGVGGEEGGYDGGY 256

BLAST of HG10003016 vs. TAIR 10
Match: AT5G46730.1 (glycine-rich protein )

HSP 1 Score: 43.5 bits (101), Expect = 2.9e-04
Identity = 117/194 (60.31%), Postives = 122/194 (62.89%), Query Frame = 0

Query: 62  GGGAGGGYGGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSGGGGGYGAGVGSDLG 121
           G G GGGYGG AG   GG G GSGGGG  GS Y   G+H  GYG+G G G GAG  S  G
Sbjct: 105 GEGGGGGYGGAAGGHAGGGGGGSGGGG--GSAYGAGGEHASGYGNGAGEGGGAG-ASGYG 164

Query: 122 GSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGGGA 181
           G  YG GGG G GGG G  GG   G G GGG G G GG G HG   G GGGGG GSGGG 
Sbjct: 165 GGAYGGGGGHGGGGGGGSAGGAHGGSGYGGGEGGGAGGGGSHGGAGGYGGGGGGGSGGGG 224

Query: 182 GYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGGGAGYGGGAHGSGGGAGSGYG 241
            YG GG HG GYGSGGG G G G G + GYGGG GGG GGG  YGG     GGG+G G+G
Sbjct: 225 AYGGGGAHGGGYGSGGGEGGGYGGGAAGGYGGGGGGGEGGGGSYGG---EHGGGSGGGHG 284

Query: 242 GSGEEGGYDGGYAP 256
           G G  GG  GGYAP
Sbjct: 285 GGGGHGG--GGYAP 290

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038905926.12.7e-8493.75glycine-rich cell wall structural protein 1.8-like [Benincasa hispida][more]
XP_038903617.12.1e-7688.85glycine-rich cell wall structural protein 1.8-like [Benincasa hispida][more]
XP_011650342.15.1e-6784.33glycine-rich cell wall structural protein 2 [Cucumis sativus][more]
BAA34064.11.1e-6683.96glycine-rich protein-2, partial [Cucumis sativus][more]
KAE8650021.11.1e-6477.26hypothetical protein Csa_010076 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
P104961.2e-0547.19Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2... [more]
Match NameE-valueIdentityDescription
A0A0A0L1U72.5e-6784.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1[more]
Q9ZWM25.5e-6783.96Glycine-rich protein-2 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1[more]
A0A1S3BJM72.0e-6483.03glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1CWP34.4e-5676.63glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Momordica chara... [more]
A0A6J1KTC02.1e-5077.74glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 G... [more]
Match NameE-valueIdentityDescription
AT5G46730.12.9e-0460.31glycine-rich protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 192..210
score: 45.39
coord: 150..160
score: 35.23
coord: 124..139
score: 50.0
coord: 5..21
score: 30.15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..255

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10003016.1HG10003016.1mRNA