Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATCTTTAGAACAACTTTGTCTTTTGGTTTTCTTTTGTTGGTGGGTTTAGGCTTAGCTTCGGCAGCCAGAACTCTTCTCTCCTATGATCCTCCACATCACTCTGGATATGACAATTATGATCATCCTGTAAATAACCCAAAAATAGGATACGAACGTGACCATCATGATGGACCTTATGGTGGCGGTGCTGGTGGAGGATATGGAGGCGGAGCTGGCTCATCTCTTGGAGGCTCTGGATATGGAAGTGGTGGAGGTGGAGGTAGTGGCTCTGGATATGCCGGTGTAGGAGATCATGGGGTTGGTTATGGTAGTGGTGGAGGAGGTGGATATGGAGCTGGAGTTGGCTCTGACCTTGGTGGTAGTGGATATGGAAGCGGTGGCGGGGGAGGAAGTGGTGGAGGATATGGTGATCTAGGAGGACGTGGAAAAGGTTATGGTAGCGGTGGTGGTGGAGGAAGTGGATATGGAGGTAGAGGAGATCATGGAGTTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGGTGGTGCAGGATATGGTCCAGGAGGAGACCACGGTGTAGGTTATGGAAGTGGAGGAGGAGGTGGGTCTGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGTGGTGGTGGTGGTGGCGGAGCAGGTTATGGTGGTGGAGCACATGGAAGTGGTGGTGGAGCTGGAAGTGGCTACGGCGGCAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA
mRNA sequence
ATGGCTATCTTTAGAACAACTTTGTCTTTTGGTTTTCTTTTGTTGGTGGGTTTAGGCTTAGCTTCGGCAGCCAGAACTCTTCTCTCCTATGATCCTCCACATCACTCTGGATATGACAATTATGATCATCCTGTAAATAACCCAAAAATAGGATACGAACGTGACCATCATGATGGACCTTATGGTGGCGGTGCTGGTGGAGGATATGGAGGCGGAGCTGGCTCATCTCTTGGAGGCTCTGGATATGGAAGTGGTGGAGGTGGAGGTAGTGGCTCTGGATATGCCGGTGTAGGAGATCATGGGGTTGGTTATGGTAGTGGTGGAGGAGGTGGATATGGAGCTGGAGTTGGCTCTGACCTTGGTGGTAGTGGATATGGAAGCGGTGGCGGGGGAGGAAGTGGTGGAGGATATGGTGATCTAGGAGGACGTGGAAAAGGTTATGGTAGCGGTGGTGGTGGAGGAAGTGGATATGGAGGTAGAGGAGATCATGGAGTTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGGTGGTGCAGGATATGGTCCAGGAGGAGACCACGGTGTAGGTTATGGAAGTGGAGGAGGAGGTGGGTCTGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGTGGTGGTGGTGGTGGCGGAGCAGGTTATGGTGGTGGAGCACATGGAAGTGGTGGTGGAGCTGGAAGTGGCTACGGCGGCAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA
Coding sequence (CDS)
ATGGCTATCTTTAGAACAACTTTGTCTTTTGGTTTTCTTTTGTTGGTGGGTTTAGGCTTAGCTTCGGCAGCCAGAACTCTTCTCTCCTATGATCCTCCACATCACTCTGGATATGACAATTATGATCATCCTGTAAATAACCCAAAAATAGGATACGAACGTGACCATCATGATGGACCTTATGGTGGCGGTGCTGGTGGAGGATATGGAGGCGGAGCTGGCTCATCTCTTGGAGGCTCTGGATATGGAAGTGGTGGAGGTGGAGGTAGTGGCTCTGGATATGCCGGTGTAGGAGATCATGGGGTTGGTTATGGTAGTGGTGGAGGAGGTGGATATGGAGCTGGAGTTGGCTCTGACCTTGGTGGTAGTGGATATGGAAGCGGTGGCGGGGGAGGAAGTGGTGGAGGATATGGTGATCTAGGAGGACGTGGAAAAGGTTATGGTAGCGGTGGTGGTGGAGGAAGTGGATATGGAGGTAGAGGAGATCATGGAGTTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGGTGGTGCAGGATATGGTCCAGGAGGAGACCACGGTGTAGGTTATGGAAGTGGAGGAGGAGGTGGGTCTGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGTGGTGGTGGTGGTGGCGGAGCAGGTTATGGTGGTGGAGCACATGGAAGTGGTGGTGGAGCTGGAAGTGGCTACGGCGGCAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCTTAA
Protein sequence
MAIFRTTLSFGFLLLVGLGLASAARTLLSYDPPHHSGYDNYDHPVNNPKIGYERDHHDGPYGGGAGGGYGGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSGGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGGGAGYGGGAHGSGGGAGSGYGGSGEEGGYDGGYAP
Homology
BLAST of HG10003016 vs. NCBI nr
Match:
XP_038905926.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])
HSP 1 Score: 322.8 bits (826), Expect = 2.7e-84
Identity = 240/256 (93.75%), Postives = 243/256 (94.92%), Query Frame = 0
Query: 1 MAIFRTTLSFGFLLLVGLGLASAARTLLSYD-PPHHSGYDNYDHPVNNPKIGYERDHHDG 60
MAI R TLSFGFLLLVGLGLASA R LLSYD PPH SGYDNYDHPV+NPK+GYERDHHDG
Sbjct: 9 MAILR-TLSFGFLLLVGLGLASATRALLSYDIPPHRSGYDNYDHPVHNPKVGYERDHHDG 68
Query: 61 PYGGGAGGGYGGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSGGGGGYGAGVGSD 120
PYGGGAGGGYGGGAGSSLGGSGYGSGGGG GSGYAG GDHGVGYGSGGGGGYGAGVGSD
Sbjct: 69 PYGGGAGGGYGGGAGSSLGGSGYGSGGGG--GSGYAGAGDHGVGYGSGGGGGYGAGVGSD 128
Query: 121 LGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGG 180
LGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGG
Sbjct: 129 LGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGG 188
Query: 181 GAGYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGGGAGYGGGAHGSGGGAGSG 240
GAGYGPG +HGVGYGSGGGGGSGSGYGGSKGYGGGS GGGGGAGYGGGAHGSGGGAGSG
Sbjct: 189 GAGYGPGVEHGVGYGSGGGGGSGSGYGGSKGYGGGS--GGGGGAGYGGGAHGSGGGAGSG 248
Query: 241 YGGSGEEGGYDGGYAP 256
YGGSGEEGGYDGGYAP
Sbjct: 249 YGGSGEEGGYDGGYAP 259
BLAST of HG10003016 vs. NCBI nr
Match:
XP_038903617.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])
HSP 1 Score: 296.6 bits (758), Expect = 2.1e-76
Identity = 231/260 (88.85%), Postives = 235/260 (90.38%), Query Frame = 0
Query: 1 MAIFRTTLSFGFLLLVGLGLASAARTLLSYD-PPHHSGYDNYDHPVNNPKIGYERDHHDG 60
M IFR LSFG LLLVGLGLASA RTLLSYD PPH SGYDNYDHPV+NPK+GYERDHHDG
Sbjct: 1 MDIFR-NLSFGLLLLVGLGLASATRTLLSYDIPPHRSGYDNYDHPVHNPKVGYERDHHDG 60
Query: 61 PYGGGAGGGYGGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSGGGGGYGAGVGSD 120
PYGGGA GGYGGGAGSSLGGSGYGSGGGG GSGY GVGDHGVGYGSGGGGGYGAGVGSD
Sbjct: 61 PYGGGAAGGYGGGAGSSLGGSGYGSGGGG--GSGYTGVGDHGVGYGSGGGGGYGAGVGSD 120
Query: 121 LGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGG 180
LGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGY GRGDHGVGYGSGGGGGYGSGG
Sbjct: 121 LGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYEGRGDHGVGYGSGGGGGYGSGG 180
Query: 181 GAGYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGGGAGYGGGAH----GSGGG 240
G +GPG HG+GYGSGGGGGSG GYGGSKGY GGS GGGGGAGYGGGAH GSGGG
Sbjct: 181 GVEHGPGVGHGIGYGSGGGGGSGGGYGGSKGYEGGS--GGGGGAGYGGGAHGSGYGSGGG 240
Query: 241 AGSGYGGSGEEGGYDGGYAP 256
AGSGYGGSGEEGGYDGGYAP
Sbjct: 241 AGSGYGGSGEEGGYDGGYAP 255
BLAST of HG10003016 vs. NCBI nr
Match:
XP_011650342.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus])
HSP 1 Score: 265.4 bits (677), Expect = 5.1e-67
Identity = 226/268 (84.33%), Postives = 232/268 (86.57%), Query Frame = 0
Query: 1 MAIFRTTLSFGFLLLVGLGLASAARTLLSYD-PPHHSGYDNYDHPVNNPKIGYE------ 60
MAI + TLSFGFLLLV LGLASAAR+LLSYD PPH SGYDNYDHPV NPK+GYE
Sbjct: 1 MAISK-TLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDG 60
Query: 61 ----RDHHDGPYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSG 120
RDHHD PYGGGAGGGY G GAGSSLGGSGYGSGGGG GSGY GVG+H VGYGSG
Sbjct: 61 YYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGG--GSGYGGVGNHEVGYGSG 120
Query: 121 GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180
GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY
Sbjct: 121 GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180
Query: 181 GSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGGGAGYGG 240
GSGGGGGYGSG G G G DHGVGYGSGGGGG+GSGYGGSKGYGGGS GGGGGAGYGG
Sbjct: 181 GSGGGGGYGSGVGGGAGV-VDHGVGYGSGGGGGAGSGYGGSKGYGGGS--GGGGGAGYGG 240
Query: 241 GAHGSGGGAGSGYGGSGEEGGYDGGYAP 256
GAHGSG G+G G GSGEEGGYDGGYAP
Sbjct: 241 GAHGSGYGSGGG-AGSGEEGGYDGGYAP 261
BLAST of HG10003016 vs. NCBI nr
Match:
BAA34064.1 (glycine-rich protein-2, partial [Cucumis sativus])
HSP 1 Score: 264.2 bits (674), Expect = 1.1e-66
Identity = 225/268 (83.96%), Postives = 232/268 (86.57%), Query Frame = 0
Query: 1 MAIFRTTLSFGFLLLVGLGLASAARTLLSYD-PPHHSGYDNYDHPVNNPKIGYE------ 60
MAI + TLSFGFLLLV LGLASAAR+LLSYD PPH SGYDNYDHPV NPK+GYE
Sbjct: 1 MAISK-TLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDG 60
Query: 61 ----RDHHDGPYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSG 120
RDHHD PYGGGAGGGY G GAGSSLGGSGYGSGGGG GSGY GVG+H VGYGSG
Sbjct: 61 YYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGG--GSGYGGVGNHEVGYGSG 120
Query: 121 GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180
GGGGYGAGVGSDLGGSGYGSGGGGG+GGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY
Sbjct: 121 GGGGYGAGVGSDLGGSGYGSGGGGGTGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180
Query: 181 GSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGGGAGYGG 240
GSGGGGGYGSG G G G DHGVGYGSGGGGG+GSGYGGSKGYGGGS GGGGGAGYGG
Sbjct: 181 GSGGGGGYGSGVGGGAGV-VDHGVGYGSGGGGGAGSGYGGSKGYGGGS--GGGGGAGYGG 240
Query: 241 GAHGSGGGAGSGYGGSGEEGGYDGGYAP 256
GAHGSG G+G G GSGEEGGYDGGYAP
Sbjct: 241 GAHGSGYGSGGG-AGSGEEGGYDGGYAP 261
BLAST of HG10003016 vs. NCBI nr
Match:
KAE8650021.1 (hypothetical protein Csa_010076 [Cucumis sativus])
HSP 1 Score: 257.7 bits (657), Expect = 1.1e-64
Identity = 231/299 (77.26%), Postives = 237/299 (79.26%), Query Frame = 0
Query: 1 MAIFRTTLSFGFLLLVGLGLASAARTLLSYD-PPHHSGYDNYDHPVNNPKIGYE------ 60
MAI + TLSFGFLLLV LGLASAAR+LLSYD PPH SGYDNYDHPV NPK+GYE
Sbjct: 1 MAISK-TLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDG 60
Query: 61 ----RDHHDGPYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSG 120
RDHHD PYGGGAGGGY G GAGSSLGGSGYGSGGGG GSGY GVG+H VGYGSG
Sbjct: 61 YYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGG--GSGYGGVGNHEVGYGSG 120
Query: 121 GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180
GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY
Sbjct: 121 GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180
Query: 181 GSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGG-------- 240
GSGGGGGYGSG G G G DHGVGYGSGGGGG+GSGYGGSKGYGGGSGGGG
Sbjct: 181 GSGGGGGYGSGVGGGAGV-VDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGA 240
Query: 241 -----------------GGGAGYGGGA----HGSGGGA--GSGYGGSGEEGGYDGGYAP 256
GGGAGY GGA +GSGGGA GSGYGGSGEEGGYDGGYAP
Sbjct: 241 HGSGYGSGGGAGSGSGVGGGAGYSGGASGSGYGSGGGAGSGSGYGGSGEEGGYDGGYAP 295
BLAST of HG10003016 vs. ExPASy Swiss-Prot
Match:
P10496 (Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)
HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05
Identity = 143/303 (47.19%), Postives = 164/303 (54.13%), Query Frame = 0
Query: 1 MAIFRTTLSFGFLLLVGLGLASAARTLLSYDPPHHSG-------------YDNYDHPVNN 60
MA S FL+L+ LG+ SA R LL+ D + G Y +
Sbjct: 1 MATIHRLPSLVFLVLLALGVCSARRALLTLDAGYGLGHGTGGGYGGAAGSYGGGGGGGSG 60
Query: 61 PKIGYERDHHDGPYGGGAGG--------------GYGGGAGSSLGG----------SGYG 120
GY +H YGGG+GG GYGGG GS GG GYG
Sbjct: 61 GGGGYAGEHGVVGYGGGSGGGQGGGVGYGGDQGAGYGGGGGSGGGGGVAYGGGGERGGYG 120
Query: 121 SGGGGGSGSGYAGVGDHGVGYGSGGGGGYGAGVGSDLGGS---GYGSGGG-GGSGGGYGD 180
G GGG+G GY G+HG+GYG GGG G G G G + GG+ GYG+GGG GG GGG GD
Sbjct: 121 GGQGGGAGGGYGAGGEHGIGYGGGGGSGAGGGGGYNAGGAQGGGYGTGGGAGGGGGGGGD 180
Query: 181 L-GGRGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGGGAGYGPGGDHGVGYGSGGG 240
GG G G G+GGG G GYGG G+H G GGGGG G G G GYG GG+HG G G G G
Sbjct: 181 HGGGYGGGQGAGGGAGGGYGGGGEH----GGGGGGGQGGGAGGGYGAGGEHGGGAGGGQG 240
Query: 241 GGSGSGYGGSKGYGGGSGGGGGGGAG--------YGGGA-HGSGGGAGSGYGGSGEEGGY 253
GG+G GYG +GGG+GGG GGGAG +GGGA G GGGAG GYG GE GG
Sbjct: 241 GGAGGGYGAGGEHGGGAGGGQGGGAGGGYGAGGEHGGGAGGGQGGGAGGGYGAGGEHGGG 299
BLAST of HG10003016 vs. ExPASy TrEMBL
Match:
A0A0A0L1U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1)
HSP 1 Score: 265.4 bits (677), Expect = 2.5e-67
Identity = 226/268 (84.33%), Postives = 232/268 (86.57%), Query Frame = 0
Query: 1 MAIFRTTLSFGFLLLVGLGLASAARTLLSYD-PPHHSGYDNYDHPVNNPKIGYE------ 60
MAI + TLSFGFLLLV LGLASAAR+LLSYD PPH SGYDNYDHPV NPK+GYE
Sbjct: 1 MAISK-TLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDG 60
Query: 61 ----RDHHDGPYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSG 120
RDHHD PYGGGAGGGY G GAGSSLGGSGYGSGGGG GSGY GVG+H VGYGSG
Sbjct: 61 YYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGG--GSGYGGVGNHEVGYGSG 120
Query: 121 GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180
GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY
Sbjct: 121 GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180
Query: 181 GSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGGGAGYGG 240
GSGGGGGYGSG G G G DHGVGYGSGGGGG+GSGYGGSKGYGGGS GGGGGAGYGG
Sbjct: 181 GSGGGGGYGSGVGGGAGV-VDHGVGYGSGGGGGAGSGYGGSKGYGGGS--GGGGGAGYGG 240
Query: 241 GAHGSGGGAGSGYGGSGEEGGYDGGYAP 256
GAHGSG G+G G GSGEEGGYDGGYAP
Sbjct: 241 GAHGSGYGSGGG-AGSGEEGGYDGGYAP 261
BLAST of HG10003016 vs. ExPASy TrEMBL
Match:
Q9ZWM2 (Glycine-rich protein-2 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)
HSP 1 Score: 264.2 bits (674), Expect = 5.5e-67
Identity = 225/268 (83.96%), Postives = 232/268 (86.57%), Query Frame = 0
Query: 1 MAIFRTTLSFGFLLLVGLGLASAARTLLSYD-PPHHSGYDNYDHPVNNPKIGYE------ 60
MAI + TLSFGFLLLV LGLASAAR+LLSYD PPH SGYDNYDHPV NPK+GYE
Sbjct: 1 MAISK-TLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDG 60
Query: 61 ----RDHHDGPYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSG 120
RDHHD PYGGGAGGGY G GAGSSLGGSGYGSGGGG GSGY GVG+H VGYGSG
Sbjct: 61 YYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGG--GSGYGGVGNHEVGYGSG 120
Query: 121 GGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180
GGGGYGAGVGSDLGGSGYGSGGGGG+GGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY
Sbjct: 121 GGGGYGAGVGSDLGGSGYGSGGGGGTGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGY 180
Query: 181 GSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGGGAGYGG 240
GSGGGGGYGSG G G G DHGVGYGSGGGGG+GSGYGGSKGYGGGS GGGGGAGYGG
Sbjct: 181 GSGGGGGYGSGVGGGAGV-VDHGVGYGSGGGGGAGSGYGGSKGYGGGS--GGGGGAGYGG 240
Query: 241 GAHGSGGGAGSGYGGSGEEGGYDGGYAP 256
GAHGSG G+G G GSGEEGGYDGGYAP
Sbjct: 241 GAHGSGYGSGGG-AGSGEEGGYDGGYAP 261
BLAST of HG10003016 vs. ExPASy TrEMBL
Match:
A0A1S3BJM7 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490774 PE=4 SV=1)
HSP 1 Score: 255.8 bits (652), Expect = 2.0e-64
Identity = 225/271 (83.03%), Postives = 231/271 (85.24%), Query Frame = 0
Query: 1 MAIFRTTLSFGFLLLVGLGLASAARTLLSYD-PPHHSGYD-NYD-HPVNNPKIGYERDHH 60
MAI + TLSFGFLLLV LGLASAAR+LL YD PPH SGYD NYD HPV NPK+GYE DHH
Sbjct: 1 MAISK-TLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHH 60
Query: 61 DG----------PYGGGAGGGY--GGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYG 120
DG PYGGGAGGGY GGGAGSSLGGSGYGSGGGG GSGY GVG+HGVGYG
Sbjct: 61 DGYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGG--GSGYGGVGNHGVGYG 120
Query: 121 SGGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGV 180
SGGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGYGGRGDHGV
Sbjct: 121 SGGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGV 180
Query: 181 GYGSGGGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGGGAGY 240
GYGSGGGGGYGSG G G G DHGVGYGSGGGGG+G GYGGSKGYG GS GGGGGAGY
Sbjct: 181 GYGSGGGGGYGSGVG---GAGVDHGVGYGSGGGGGAGGGYGGSKGYGAGS--GGGGGAGY 240
Query: 241 GGGAHGSGGGAGSGYG-GSGEEGGYDGGYAP 256
GGGAHGSG G+G G G GSGEEGGYDGGYAP
Sbjct: 241 GGGAHGSGYGSGGGAGAGSGEEGGYDGGYAP 263
BLAST of HG10003016 vs. ExPASy TrEMBL
Match:
A0A6J1CWP3 (glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014911 PE=4 SV=1)
HSP 1 Score: 228.0 bits (580), Expect = 4.4e-56
Identity = 200/261 (76.63%), Postives = 215/261 (82.38%), Query Frame = 0
Query: 1 MAIFRTTLSFGFLLLVGLGLASAARTLLSYDPPHHSGYDNYDHPVNNPKIGYERDHHDGP 60
MAI + S FLLL+G GLASAARTLL ++P ++ YD ++GY+RDHHDG
Sbjct: 1 MAISK-AFSLSFLLLLGFGLASAARTLLGHEPDAYNPYDR--------RVGYDRDHHDGA 60
Query: 61 YGGGAGGGYGGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSGGGGGYGAGVGSDL 120
YGGG+GGGYG GAGSSLGGSGYGSGGGGG GSGY G GDHGVGYGSGGGGGYG G+GS L
Sbjct: 61 YGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYGGAGDHGVGYGSGGGGGYGGGMGSGL 120
Query: 121 GGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGS--G 180
GG+GYGSGGGGGSGGGYGD GGRGKGYGSGGGGGSGYGG GDHG GYGSGGGGGYGS G
Sbjct: 121 GGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGG 180
Query: 181 GGAGYGPGGDHGVGYGSGGGGGSGSGYGGSK-GYGGGSGGGGGGGAGYG-----GGAHGS 240
GGAGYGP G+HGVGYGSGGGGGSG GYGGSK GYGGGSGGG GGG GYG GG +G
Sbjct: 181 GGAGYGP-GEHGVGYGSGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGG 240
Query: 241 GGGAGSGYGGSGEEGGYDGGY 254
GGG+G GYG SGEEGGYDGGY
Sbjct: 241 GGGSGGGYGSSGEEGGYDGGY 251
BLAST of HG10003016 vs. ExPASy TrEMBL
Match:
A0A6J1KTC0 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 GN=LOC111498476 PE=4 SV=1)
HSP 1 Score: 209.1 bits (531), Expect = 2.1e-50
Identity = 206/265 (77.74%), Postives = 216/265 (81.51%), Query Frame = 0
Query: 1 MAIFRTTLSFGFLLLVGLGLASAARTLLSYDPPHHS--GYDNYDHPVNNPKIGYERDHHD 60
MAI + +LS FLLL+GLGLASAARTLLSYDPPHHS GY Y H NP++GY+ DHHD
Sbjct: 1 MAISK-SLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGY-GYQH---NPRVGYDHDHHD 60
Query: 61 GP---YGGGAGGGY--GGGAGSSLGGSGYGSGGGGGSGSGYAGVGD-HGVGYGSGGGGGY 120
GP YGGG+GGGY G GAGS+LGGSGYGSGGGGG GSGYAGVGD G GYGSGGGGG
Sbjct: 61 GPYGAYGGGSGGGYGAGAGAGSALGGSGYGSGGGGGGGSGYAGVGDLGGSGYGSGGGGGS 120
Query: 121 GAGVGSDLG--GSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180
G G G DLG G GYGSGGGGGSG GYGDL G GKGYGSGGGGGSGYGG DHGVGYGSG
Sbjct: 121 GVGYG-DLGGHGKGYGSGGGGGSGVGYGDLSGHGKGYGSGGGGGSGYGGGADHGVGYGSG 180
Query: 181 GGGGYGSGGGAGYGPGGDHGVGYGSGGGGGSGSGYGG-SKGYGGGSGGGGGGGAGYGGGA 240
GGGGYG+GGGAGYGPGGDHGVGYGSGGGGGSG GYGG KGYGGG G GGG G G
Sbjct: 181 GGGGYGAGGGAGYGPGGDHGVGYGSGGGGGSGGGYGGRDKGYGGGPKGYGGGAKGSG--- 240
Query: 241 HGSGGGAGSGYGG-SGEEGGYDGGY 254
+GSGGGAGSGYGG GEEGGYDGGY
Sbjct: 241 YGSGGGAGSGYGGVGGEEGGYDGGY 256
BLAST of HG10003016 vs. TAIR 10
Match:
AT5G46730.1 (glycine-rich protein )
HSP 1 Score: 43.5 bits (101), Expect = 2.9e-04
Identity = 117/194 (60.31%), Postives = 122/194 (62.89%), Query Frame = 0
Query: 62 GGGAGGGYGGGAGSSLGGSGYGSGGGGGSGSGYAGVGDHGVGYGSGGGGGYGAGVGSDLG 121
G G GGGYGG AG GG G GSGGGG GS Y G+H GYG+G G G GAG S G
Sbjct: 105 GEGGGGGYGGAAGGHAGGGGGGSGGGG--GSAYGAGGEHASGYGNGAGEGGGAG-ASGYG 164
Query: 122 GSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGGGA 181
G YG GGG G GGG G GG G G GGG G G GG G HG G GGGGG GSGGG
Sbjct: 165 GGAYGGGGGHGGGGGGGSAGGAHGGSGYGGGEGGGAGGGGSHGGAGGYGGGGGGGSGGGG 224
Query: 182 GYGPGGDHGVGYGSGGGGGSGSGYGGSKGYGGGSGGGGGGGAGYGGGAHGSGGGAGSGYG 241
YG GG HG GYGSGGG G G G G + GYGGG GGG GGG YGG GGG+G G+G
Sbjct: 225 AYGGGGAHGGGYGSGGGEGGGYGGGAAGGYGGGGGGGEGGGGSYGG---EHGGGSGGGHG 284
Query: 242 GSGEEGGYDGGYAP 256
G G GG GGYAP
Sbjct: 285 GGGGHGG--GGYAP 290
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038905926.1 | 2.7e-84 | 93.75 | glycine-rich cell wall structural protein 1.8-like [Benincasa hispida] | [more] |
XP_038903617.1 | 2.1e-76 | 88.85 | glycine-rich cell wall structural protein 1.8-like [Benincasa hispida] | [more] |
XP_011650342.1 | 5.1e-67 | 84.33 | glycine-rich cell wall structural protein 2 [Cucumis sativus] | [more] |
BAA34064.1 | 1.1e-66 | 83.96 | glycine-rich protein-2, partial [Cucumis sativus] | [more] |
KAE8650021.1 | 1.1e-64 | 77.26 | hypothetical protein Csa_010076 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
P10496 | 1.2e-05 | 47.19 | Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L1U7 | 2.5e-67 | 84.33 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1 | [more] |
Q9ZWM2 | 5.5e-67 | 83.96 | Glycine-rich protein-2 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1 | [more] |
A0A1S3BJM7 | 2.0e-64 | 83.03 | glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1... | [more] |
A0A6J1CWP3 | 4.4e-56 | 76.63 | glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Momordica chara... | [more] |
A0A6J1KTC0 | 2.1e-50 | 77.74 | glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 G... | [more] |
Match Name | E-value | Identity | Description | |
AT5G46730.1 | 2.9e-04 | 60.31 | glycine-rich protein | [more] |