HG10002969 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002969
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	COBW domain-containing protein
Location	Chr11: 15920865 .. 15924963 (-)
RNA-Seq Expression	HG10002969
Synteny	HG10002969

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGGAAATTGGAATTATGATGCAGGCCTTGCTAAGCCAGCTCCAGTTATAGAAACATTTTGCACAGATGAGCTGGTTTCACGTTATGTCAAACTAGATGGAGTTGTAACTTTAGTAGACTCCAAACATGCCATGCAACACTTGAATGAAGTGAAACCAAGATTTGTGGTGAACGAGGCTGTAGAACAAGTTGCTTATGCTGATAGGATTATAATGAACAAGGTAATGAATTACTGTTCTGGACTTTGTGCCTCAGGCTTAACTTTTATTTTAATTCTTTTTTTTTATAAATAGAAACATTTCATTGAATAAATGAAATAAGGGAAGACCCCAATCACCTAAAGGTGATTACACAAGAGATTTCCAATTGGAAACTAAATAAGAAAGACTAATGTTCTTAAAAGGATGTTCAGTTTTGCACCAATAAAAAGCAATAGACAGAACCATATCAATAAAAGAATCCAATTACAAACCTACTTCGCCCTTTTAACCTCAAGTTATTGTTTCCACATTGTATTGACAGATTGATCTTGTAAGTCCAGAAGAATTGGAGCAACTGACACGGAAGATTAAGGTATCATTGCTTATCTTAATTTGAGATCATTGGTAAATATGTACAGATTAATTCTGATCAAATGGGGCTGGTTAGGATTCAATTAGAACAGCACTGGAAAAACGAAAACGAAAACGAATTATCTTCATTTGATGTCTTTTGATTCATGTTGATGATACATTGTTACATCTAAAACCATGTAAAATGCATTTTATGCTCCTTTTTACCCTAACTTCATGATTTGTAAATCGTATGTGTTACATCTATCTTGCAGCGAATAAATGCGATGGCCCAAGTTAAGCTGACTAAGTTTGGATCTGTTGACATCGACTTTGTATTAGGAGTGGGTGGATATGATCTTGACAGGTCATAGTCTGGTTGCATCAGATTTTTCTTTTCTTTTCCTTTTTTTTTTGTGTTGGGGGGGGGGGGGGGGGGGGGTTGAACTTTAAGGTCTATTTATTTGGTCCCTAAACTTTCAAATTTAGTCCCAACCTTTCAAATATTTTAAATTCACGGATCTACTCGACACAAAATTGAAAGTTTATGGTTTTATTAGACATGAAATTCAATTTTATATCTACTAGATTAGTTAATTCGGAAAAAAATTTCAGGGACCTATTAGATAGAAAATTTAAAGTTTAAGGCCTACTAAATATTATTTAAAGTTTAGGAATTAAATAAGCACAAACCTCAAAGTTTAGGGACTAAGCTTTTAATTTAACATTTTCTTTTTCGAGTTCAACAATTACAGGGATTGGCCAAAGTTTTCTCGTTTCTTACTTTATTGTTCCCATTTTAAGTATTACGACACATCCAAATTTAAAAATATTTTGAACCTTGCGTATGTTGTGCAGAATTGATTCTCAAGTTGAAGCCAACTCTTGTTCTGGAGACCACAAACATGAAGCTGAACATGGTACATTTGCCTTCTTTTTTCTGTTTTCTTCTTCTTTAGCGTGTTTCTGAAACAAAAATAACATGTCACAAAATAAATCCCATGAAAATGAAGGGCATATTTGGAAGTTATGTTTGAAAATATTTTTTGTATAAAAAAAACTTGTTTACTAGAATAATTTTTAAAAACAATTTTCAGAATAAAAAACAATAAATAGTAGAAAGAGTATTTTGTTGTTTTGATGTATTTTCTTGGACATTTTTAAAACAAGTAGTTCACATTAGATCATCAACTGTTTTTAAAGTATTATGTGCTTTAACATATGTTACTTTTAAAAATTACCATGGAGAAGAAAAAGGTAAAATTACAAGAACAAATTTCTTTTTAATTAATTTCATAATTTTATTATTTGGCCAATTTTTTAGAACACCACAAGGGACACGATCATCATCATCACCACCACCACGACCATGTACATGATTCTGCTGTGTCTAGTGTCAGCATTGTTTCTGAGGGATTACTTGACCTTGATGAGGTACTGGTATTTTTTATATATGTTGTATGCTGTTTTGTCATTTCACTTATGAGATTCCTAGCTGACAATTTCCATGCAAATGTTACAAAATTAACCAGGACCATCTAAGACCTATTTGAGTTCTTTTTGCTCAAGGTGAACTGCTGAGTTCTTGAGCTTGGAGTTTCAATGAGTTTGATGACTGTTAAATGTTTTTTTTTTTTTTTTTTTTTTTTGGAGAAGCGCTTATTAAGTGCTTTCTCAAATTTTTAAATGTTTTTAGAATTTTTTAAAACATTTTTTTTACCACTAGTATGAAACATGTGCGATGCATGTGAAAAATCATAGTTTAATTTAATTTTATAGAATAAAAGATGGTCATTGCAGACATGTATTTAATTTTTATGTACATTATATTTTAATTGTGAAATTTACATATTAATTTGTTCACAACATACTATTTAAATAAGAAAAAGTTTATAAATAAAAAACAAAAAATAAAATTTAACACGATTTTTTAATTTTCATTTATAATTAATTGGCAGTGAAGGAATGCCCATACAGACAATATAGATACACACATATTTATGTCCTCAAACATCAAAACCCTATTGCTCAAAAACCAAAAAACCCTATATCCCACCTTTTTCTTAATCCCTCTCCTTCTCATGTTGTCCAATGTCCATAGCCATCTGTCACTGGCACCCACATATTCTATTGCAGCCTCACATAAAGTCCACCAAGCCAGCTTTTTTGAAATTCAATCTTTTCATTCTTCTTCATTGCCATGACTGTTGCATCATCGTCATTGTCGTCATTATATTGAGGTCAAAGAGAAGTATCGTGAGCCTTTGATATGGAGGAGGCCTCTGCATTTTTTATATTGTACAAGCTAGAAGAAAATATATGTTTATATAGAAAAAGATAGGAAACGTTGAAGAATTGAGAAATGGGAAAGTCTGGAGATGATGTGGAGAGGTAACATTCTTATTCTAAGAAACTTAGGAGACCATGAGAAACGTTACATTTAAGTGGAAACTTAAATGTAATAATATATATTTTTTTTTTATATATCCGTGAGTGTCCGAGCCAGCTTACGCGCACCTCGACTAATCTCACGAGACAACCCGCCTGACCCTACAACATTTGGGTGTCAAGAAAACTCATAGGAAATTAATTTCTAGGTAGGTGGCCACCATGGATTGAACCCATGACCTTTTAGTCATTTATTGAGAAATGTTAATAATATCAATGCAATCAATATTAACATAACATAAGACTTTTAAATTTTCTTTTGAGTTATCATTTAAAAAATTTTGAATTTGACAAATCTACCACTAATGTACTAGTTAGAATGATTAAAATGGAAGGGGAAAAATGAGGAGAGAGAGTTTCTCCCCTATAGTTCCTTTTATATATAGTATAGATGTAGATGTAGATGTAGATGTAACCAAATACCATGAAAATTTTGGAGGGTGTTTATTGTTTAGTTAGCTAAATCAACCTTTTCTTTACTGCTATTCCGAACTCGCCTTCATTGAACTAATTTTACTGTCATCACTTCGGCTTTGCTATTGAAGTTCATTGGTGTGGATTTTACTACTTTAGTCGTCATCCAATGCTTGAAATGCACCCTGTAGGTTGACGATTGGCTCGAACGATTGATCGAAGAGAAAGGAGATGACTTGTATAGAATGAAAGGAGTGTTGAGTGTAAATGGTTATGAGCAGCGCTATGTCTTTCAGGTACTTCATTTCTTCTTCATTTACATACTTTTTTCATTTGTGCAGTTGGGATCGAACCATCGAAGTTAAAATGGTATCTTATCCACTAAGCTATACTTGAATTAACCACCAAAATCAATAGTCAATACACATAACAATCTCATTCTATGTGCAATGGAACTAGGGTTCAATTAGATGAAATCAAAAGTTTAATAGAATATTTTTCCAAAAATTAATCAATGGTTATTTTTGCTTGTTTCATCTTTCAGGGAGTGCACTCTATCTTGGATGGCTGCCCAGGAAAAGCATGGGGCTCTGATGAAAAGAGGATAAACAAGTTGGTTTTCATAGGAAAGAATTTGGACGAAACTGCCCTTAGAAAAGGTTTTAAAGGTTGTTTAATTTGA

mRNA sequence

ATGGTTGGAAATTGGAATTATGATGCAGGCCTTGCTAAGCCAGCTCCAGTTATAGAAACATTTTGCACAGATGAGCTGGTTTCACGTTATGTCAAACTAGATGGAGTTGTAACTTTAGTAGACTCCAAACATGCCATGCAACACTTGAATGAAGTGAAACCAAGATTTGTGGTGAACGAGGCTGTAGAACAAGTTGCTTATGCTGATAGGATTATAATGAACAAGATTGATCTTGTAAGTCCAGAAGAATTGGAGCAACTGACACGGAAGATTAAGCGAATAAATGCGATGGCCCAAGTTAAGCTGACTAAGTTTGGATCTGTTGACATCGACTTTGTATTAGGAGTGGGTGGATATGATCTTGACAGAATTGATTCTCAAGTTGAAGCCAACTCTTGTTCTGGAGACCACAAACATGAAGCTGAACATGAACACCACAAGGGACACGATCATCATCATCACCACCACCACGACCATGTACATGATTCTGCTGTGTCTAGTGTCAGCATTGTTTCTGAGGGATTACTTGACCTTGATGAGGTTGACGATTGGCTCGAACGATTGATCGAAGAGAAAGGAGATGACTTGTATAGAATGAAAGGAGTGTTGAGTGTAAATGGTTATGAGCAGCGCTATGTCTTTCAGGGAGTGCACTCTATCTTGGATGGCTGCCCAGGAAAAGCATGGGGCTCTGATGAAAAGAGGATAAACAAGTTGGTTTTCATAGGAAAGAATTTGGACGAAACTGCCCTTAGAAAAGGTTTTAAAGGTTGTTTAATTTGA

Coding sequence (CDS)

ATGGTTGGAAATTGGAATTATGATGCAGGCCTTGCTAAGCCAGCTCCAGTTATAGAAACATTTTGCACAGATGAGCTGGTTTCACGTTATGTCAAACTAGATGGAGTTGTAACTTTAGTAGACTCCAAACATGCCATGCAACACTTGAATGAAGTGAAACCAAGATTTGTGGTGAACGAGGCTGTAGAACAAGTTGCTTATGCTGATAGGATTATAATGAACAAGATTGATCTTGTAAGTCCAGAAGAATTGGAGCAACTGACACGGAAGATTAAGCGAATAAATGCGATGGCCCAAGTTAAGCTGACTAAGTTTGGATCTGTTGACATCGACTTTGTATTAGGAGTGGGTGGATATGATCTTGACAGAATTGATTCTCAAGTTGAAGCCAACTCTTGTTCTGGAGACCACAAACATGAAGCTGAACATGAACACCACAAGGGACACGATCATCATCATCACCACCACCACGACCATGTACATGATTCTGCTGTGTCTAGTGTCAGCATTGTTTCTGAGGGATTACTTGACCTTGATGAGGTTGACGATTGGCTCGAACGATTGATCGAAGAGAAAGGAGATGACTTGTATAGAATGAAAGGAGTGTTGAGTGTAAATGGTTATGAGCAGCGCTATGTCTTTCAGGGAGTGCACTCTATCTTGGATGGCTGCCCAGGAAAAGCATGGGGCTCTGATGAAAAGAGGATAAACAAGTTGGTTTTCATAGGAAAGAATTTGGACGAAACTGCCCTTAGAAAAGGTTTTAAAGGTTGTTTAATTTGA

Protein sequence

MVGNWNYDAGLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYADRIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVEANSCSGDHKHEAEHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLIEEKGDDLYRMKGVLSVNGYEQRYVFQGVHSILDGCPGKAWGSDEKRINKLVFIGKNLDETALRKGFKGCLI

Homology

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BLAST of HG10002969 vs. NCBI nr
Match: XP_004146192.1 (uncharacterized protein LOC101208167 [Cucumis sativus] >KGN55722.2 hypothetical protein Csa_011039 [Cucumis sativus])

HSP 1 Score: 490.0 bits (1260), Expect = 1.3e-134
Identity = 244/251 (97.21%), Postives = 250/251 (99.60%), Query Frame = 0


Query: 10  GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 69
           GLAKP PVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD
Sbjct: 174 GLAKPGPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 233

Query: 70  RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE 129
           RIIMNKIDLVSPEELEQLT+KIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE
Sbjct: 234 RIIMNKIDLVSPEELEQLTQKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE 293

Query: 130 ANSCSGDHKHEAEHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 189
           AN+CSGDHKHEA+HEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDE+DDWLERLI
Sbjct: 294 ANTCSGDHKHEAQHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDEIDDWLERLI 353

Query: 190 EEKGDDLYRMKGVLSVNGYEQRYVFQGVHSILDGCPGKAWGSDEKRINKLVFIGKNLDET 249
           EEKGDDLYRMKGVLSVNG++QRYVFQGVHSILDGCPGKAWGSDEKRINKLVFIGKNLDET
Sbjct: 354 EEKGDDLYRMKGVLSVNGHDQRYVFQGVHSILDGCPGKAWGSDEKRINKLVFIGKNLDET 413

Query: 250 ALRKGFKGCLI 261
           ALRKGFKGCLI
Sbjct: 414 ALRKGFKGCLI 424

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BLAST of HG10002969 vs. NCBI nr
Match: XP_016900579.1 (PREDICTED: COBW domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 484.6 bits (1246), Expect = 5.5e-133
Identity = 243/251 (96.81%), Postives = 248/251 (98.80%), Query Frame = 0


Query: 10  GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 69
           GLAKP PVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD
Sbjct: 39  GLAKPGPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 98

Query: 70  RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE 129
           RIIMNKIDLVSPEELEQLT+KIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE
Sbjct: 99  RIIMNKIDLVSPEELEQLTQKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE 158

Query: 130 ANSCSGDHKHEAEHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 189
           AN+CSGDHKHEA+HEHHKGHDH HHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI
Sbjct: 159 ANTCSGDHKHEAQHEHHKGHDHLHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 218

Query: 190 EEKGDDLYRMKGVLSVNGYEQRYVFQGVHSILDGCPGKAWGSDEKRINKLVFIGKNLDET 249
           EEKGDDLYRMKGVLSVNGY+QRYVFQGVHS LDGCPGKAWGSDE+RINKLVFIGKNLDET
Sbjct: 219 EEKGDDLYRMKGVLSVNGYDQRYVFQGVHSTLDGCPGKAWGSDEQRINKLVFIGKNLDET 278

Query: 250 ALRKGFKGCLI 261
           ALRKGFKGCLI
Sbjct: 279 ALRKGFKGCLI 289

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BLAST of HG10002969 vs. NCBI nr
Match: XP_038877154.1 (P-loop guanosine triphosphatase YjiA-like [Benincasa hispida])

HSP 1 Score: 479.9 bits (1234), Expect = 1.3e-131
Identity = 244/251 (97.21%), Postives = 246/251 (98.01%), Query Frame = 0


Query: 10  GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 69
           GLAKP PVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD
Sbjct: 176 GLAKPGPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 235

Query: 70  RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE 129
           RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDS VE
Sbjct: 236 RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSHVE 295

Query: 130 ANSCSGDHKHEAEHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 189
           ANSCSG+ KHEAEHEHHKGHD HHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI
Sbjct: 296 ANSCSGERKHEAEHEHHKGHD-HHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 355

Query: 190 EEKGDDLYRMKGVLSVNGYEQRYVFQGVHSILDGCPGKAWGSDEKRINKLVFIGKNLDET 249
           EEKGDDLYRMKGVLSVNGYEQRYVFQGVHSILDG PGKAWGSDEKRINKLVFIGKNLDET
Sbjct: 356 EEKGDDLYRMKGVLSVNGYEQRYVFQGVHSILDGSPGKAWGSDEKRINKLVFIGKNLDET 415

Query: 250 ALRKGFKGCLI 261
           ALRKGFKGCL+
Sbjct: 416 ALRKGFKGCLV 425

[Close]

BLAST of HG10002969 vs. NCBI nr
Match: TYK11456.1 (COBW domain-containing protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 473.4 bits (1217), Expect = 1.3e-129
Identity = 238/249 (95.58%), Postives = 243/249 (97.59%), Query Frame = 0


Query: 10  GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 69
           GLAKP PVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD
Sbjct: 173 GLAKPGPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 232

Query: 70  RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE 129
           RIIMNKIDLVSPEELEQLT+KIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE
Sbjct: 233 RIIMNKIDLVSPEELEQLTQKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE 292

Query: 130 ANSCSGDHKHEAEHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 189
           AN+CSGDHKHEA+HEHHKGHDH HHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI
Sbjct: 293 ANTCSGDHKHEAQHEHHKGHDHLHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 352

Query: 190 EEKGDDLYRMKGVLSVNGYEQRYVFQGVHSILDGCPGKAWGSDEKRINKLVFIGKNLDET 249
           EEKGDDLYRMKGVLSVNGY+QRYVFQGVHS LDGCPGKAWGSDE+RINKLVFIGKNLDET
Sbjct: 353 EEKGDDLYRMKGVLSVNGYDQRYVFQGVHSTLDGCPGKAWGSDEQRINKLVFIGKNLDET 412

Query: 250 ALRKGFKGC 259
           ALRKG   C
Sbjct: 413 ALRKGHFNC 421

[Close]

BLAST of HG10002969 vs. NCBI nr
Match: XP_022145260.1 (uncharacterized protein LOC111014757 [Momordica charantia])

HSP 1 Score: 459.5 bits (1181), Expect = 1.9e-125
Identity = 232/251 (92.43%), Postives = 239/251 (95.22%), Query Frame = 0


Query: 10  GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 69
           GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD
Sbjct: 172 GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 231

Query: 70  RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE 129
           RIIMNKIDLVS +ELE+L RKIKRINAMAQV L KFGSVD+DFVLGVGGYDLDRIDSQVE
Sbjct: 232 RIIMNKIDLVSQDELEELMRKIKRINAMAQVNLAKFGSVDVDFVLGVGGYDLDRIDSQVE 291

Query: 130 ANSCSGDHKHEAEHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 189
           AN+CSGDHKHE +HEHHKG     HHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI
Sbjct: 292 ANTCSGDHKHENKHEHHKG-----HHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 351

Query: 190 EEKGDDLYRMKGVLSVNGYEQRYVFQGVHSILDGCPGKAWGSDEKRINKLVFIGKNLDET 249
           EEKG+DLYRMKGVLSVNGYEQRYVFQGVHSILDGCPGKAW  DEKRINKLVFIGKNLDET
Sbjct: 352 EEKGEDLYRMKGVLSVNGYEQRYVFQGVHSILDGCPGKAWAPDEKRINKLVFIGKNLDET 411

Query: 250 ALRKGFKGCLI 261
           ALRKGFKGCL+
Sbjct: 412 ALRKGFKGCLL 417

[Close]

BLAST of HG10002969 vs. ExPASy Swiss-Prot
Match: Q9BRT8 (COBW domain-containing protein 1 OS=Homo sapiens OX=9606 GN=CBWD1 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.2e-27
Identity = 79/257 (30.74%), Postives = 133/257 (51.75%), Query Frame = 0


Query: 10  GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 69
           GLA P  V   F  D  +   + LDG++T+VDSK+ ++HL E KP  ++NEA  QVA AD
Sbjct: 139 GLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALAD 198

Query: 70  RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYD-LDRIDSQV 129
            I++NK DLV  E++++L   I+ IN + Q+  T+   VD+  VL +  +D L  I  Q 
Sbjct: 199 AILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQK 258

Query: 130 EANSCSGDHKHEAEHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERL 189
           +     G   H                      D ++ +++    G    + ++ +++ L
Sbjct: 259 KLQHVPGTQPH---------------------LDQSIVTITFEVPGNAKEEHLNMFIQNL 318

Query: 190 IEEKG--------DDLYRMKGVLSVNGYEQRYVFQGVHSI--LDGCPGKAWGSDEKRINK 249
           + EK          ++ R+KG++S+    Q+ + QGVH +  L+  P  +W  D +R N+
Sbjct: 319 LWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETP-VSWKDDTERTNR 373

Query: 250 LVFIGKNLDETALRKGF 256
           LV +G+NLD+  L++ F
Sbjct: 379 LVLLGRNLDKDILKQLF 373

[Close]

BLAST of HG10002969 vs. ExPASy Swiss-Prot
Match: Q5JTY5 (COBW domain-containing protein 3 OS=Homo sapiens OX=9606 GN=CBWD3 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.2e-27
Identity = 80/257 (31.13%), Postives = 133/257 (51.75%), Query Frame = 0


Query: 10  GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 69
           GLA P  V   F  D  +   + LDG++T+VDSK+ ++HL E KP  ++NEA  QVA AD
Sbjct: 139 GLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALAD 198

Query: 70  RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYD-LDRIDSQV 129
            I++NK DLV  E++++L   I+ IN + Q+  T+   VD+  VL +  +D L  I  Q 
Sbjct: 199 IILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQK 258

Query: 130 EANSCSGDHKHEAEHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERL 189
           +     G   H                      D ++ +++    G    + ++ +++ L
Sbjct: 259 KLQHVPGTQPH---------------------LDQSIVTITFEVPGNAKEEHLNMFIQNL 318

Query: 190 IEEKG--------DDLYRMKGVLSVNGYEQRYVFQGVHSI--LDGCPGKAWGSDEKRINK 249
           + EK          ++ R+KG++S+    Q+ + QGVH +  L+  P  +W  D +R N+
Sbjct: 319 LWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETP-VSWKDDTERTNR 373

Query: 250 LVFIGKNLDETALRKGF 256
           LV IG+NLD+  L++ F
Sbjct: 379 LVLIGRNLDKDILKQLF 373

[Close]

BLAST of HG10002969 vs. ExPASy Swiss-Prot
Match: Q5RIA9 (COBW domain-containing protein 5 OS=Homo sapiens OX=9606 GN=CBWD5 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.2e-27
Identity = 80/257 (31.13%), Postives = 133/257 (51.75%), Query Frame = 0


Query: 10  GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 69
           GLA P  V   F  D  +   + LDG++T+VDSK+ ++HL E KP  ++NEA  QVA AD
Sbjct: 139 GLADPGAVTSMFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALAD 198

Query: 70  RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYD-LDRIDSQV 129
            I++NK DLV  E++++L   I+ IN + Q+  T+   VD+  VL +  +D L  I  Q 
Sbjct: 199 IILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQK 258

Query: 130 EANSCSGDHKHEAEHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERL 189
           +     G   H                      D ++ +++    G    + ++ +++ L
Sbjct: 259 KLQHVPGTQPH---------------------LDQSIVTITFEVPGNAKEEHLNMFIQNL 318

Query: 190 IEEKG--------DDLYRMKGVLSVNGYEQRYVFQGVHSI--LDGCPGKAWGSDEKRINK 249
           + EK          ++ R+KG++S+    Q+ + QGVH +  L+  P  +W  D +R N+
Sbjct: 319 LWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETP-VSWKDDTERTNR 373

Query: 250 LVFIGKNLDETALRKGF 256
           LV IG+NLD+  L++ F
Sbjct: 379 LVLIGRNLDKDILKQLF 373

[Close]

BLAST of HG10002969 vs. ExPASy Swiss-Prot
Match: Q8IUF1 (COBW domain-containing protein 2 OS=Homo sapiens OX=9606 GN=CBWD2 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.2e-27
Identity = 79/257 (30.74%), Postives = 133/257 (51.75%), Query Frame = 0


Query: 10  GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 69
           GLA P  V   F  D  +   + LDG++T+VDSK+ ++HL E KP  ++NEA  QVA AD
Sbjct: 139 GLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLAEEKPDGLINEATRQVALAD 198

Query: 70  RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYD-LDRIDSQV 129
            I++NK DLV  E++++L   I+ IN + Q+  T+   VD+  VL +  +D L  I  Q 
Sbjct: 199 AILINKTDLVPEEDVKKLRATIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQK 258

Query: 130 EANSCSGDHKHEAEHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERL 189
           +     G   H                      D ++ +++    G    + ++ +++ L
Sbjct: 259 KLQHVPGTQPH---------------------LDQSIVTITFEVPGNAKEEHLNMFIQNL 318

Query: 190 IEEKG--------DDLYRMKGVLSVNGYEQRYVFQGVHSI--LDGCPGKAWGSDEKRINK 249
           + EK          ++ R+KG++S+    Q+ + QGVH +  L+  P  +W  D +R N+
Sbjct: 319 LWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETP-VSWKDDTERTNR 373

Query: 250 LVFIGKNLDETALRKGF 256
           LV +G+NLD+  L++ F
Sbjct: 379 LVLLGRNLDKDILKQLF 373

[Close]

BLAST of HG10002969 vs. ExPASy Swiss-Prot
Match: Q4V339 (COBW domain-containing protein 6 OS=Homo sapiens OX=9606 GN=CBWD6 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.3e-27
Identity = 79/257 (30.74%), Postives = 133/257 (51.75%), Query Frame = 0


Query: 10  GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 69
           GLA P  V   F  D  +   + LDG++T+VDSK+ ++HL E KP  ++NEA  QVA AD
Sbjct: 139 GLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALAD 198

Query: 70  RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYD-LDRIDSQV 129
            I++NK DLV  E++++L   ++ IN + Q+  T+   VD+  VL +  +D L  I  Q 
Sbjct: 199 IILINKTDLVPEEDVKKLRTTLRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQK 258

Query: 130 EANSCSGDHKHEAEHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERL 189
           +     G   H                      D ++ +++    G    + ++ +++ L
Sbjct: 259 KLQHVPGTQPH---------------------LDQSIVTITFDVPGNAKEEHLNMFIQNL 318

Query: 190 IEEKG--------DDLYRMKGVLSVNGYEQRYVFQGVHSI--LDGCPGKAWGSDEKRINK 249
           + EK          ++ R+KG++S+    Q+ + QGVH +  L+  P  +W  D +R N+
Sbjct: 319 LWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELCDLEETP-VSWKDDTERTNR 373

Query: 250 LVFIGKNLDETALRKGF 256
           LV IG+NLD+  L++ F
Sbjct: 379 LVLIGRNLDKDILKQLF 373

[Close]

BLAST of HG10002969 vs. ExPASy TrEMBL
Match: A0A1S4DX71 (COBW domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103491113 PE=3 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 2.6e-133
Identity = 243/251 (96.81%), Postives = 248/251 (98.80%), Query Frame = 0


Query: 10  GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 69
           GLAKP PVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD
Sbjct: 39  GLAKPGPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 98

Query: 70  RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE 129
           RIIMNKIDLVSPEELEQLT+KIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE
Sbjct: 99  RIIMNKIDLVSPEELEQLTQKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE 158

Query: 130 ANSCSGDHKHEAEHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 189
           AN+CSGDHKHEA+HEHHKGHDH HHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI
Sbjct: 159 ANTCSGDHKHEAQHEHHKGHDHLHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 218

Query: 190 EEKGDDLYRMKGVLSVNGYEQRYVFQGVHSILDGCPGKAWGSDEKRINKLVFIGKNLDET 249
           EEKGDDLYRMKGVLSVNGY+QRYVFQGVHS LDGCPGKAWGSDE+RINKLVFIGKNLDET
Sbjct: 219 EEKGDDLYRMKGVLSVNGYDQRYVFQGVHSTLDGCPGKAWGSDEQRINKLVFIGKNLDET 278

Query: 250 ALRKGFKGCLI 261
           ALRKGFKGCLI
Sbjct: 279 ALRKGFKGCLI 289

[Close]

BLAST of HG10002969 vs. ExPASy TrEMBL
Match: A0A5D3CM14 (COBW domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001130 PE=3 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 6.1e-130
Identity = 238/249 (95.58%), Postives = 243/249 (97.59%), Query Frame = 0


Query: 10  GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 69
           GLAKP PVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD
Sbjct: 173 GLAKPGPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 232

Query: 70  RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE 129
           RIIMNKIDLVSPEELEQLT+KIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE
Sbjct: 233 RIIMNKIDLVSPEELEQLTQKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE 292

Query: 130 ANSCSGDHKHEAEHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 189
           AN+CSGDHKHEA+HEHHKGHDH HHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI
Sbjct: 293 ANTCSGDHKHEAQHEHHKGHDHLHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 352

Query: 190 EEKGDDLYRMKGVLSVNGYEQRYVFQGVHSILDGCPGKAWGSDEKRINKLVFIGKNLDET 249
           EEKGDDLYRMKGVLSVNGY+QRYVFQGVHS LDGCPGKAWGSDE+RINKLVFIGKNLDET
Sbjct: 353 EEKGDDLYRMKGVLSVNGYDQRYVFQGVHSTLDGCPGKAWGSDEQRINKLVFIGKNLDET 412

Query: 250 ALRKGFKGC 259
           ALRKG   C
Sbjct: 413 ALRKGHFNC 421

[Close]

BLAST of HG10002969 vs. ExPASy TrEMBL
Match: A0A6J1CTY9 (uncharacterized protein LOC111014757 OS=Momordica charantia OX=3673 GN=LOC111014757 PE=3 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 9.1e-126
Identity = 232/251 (92.43%), Postives = 239/251 (95.22%), Query Frame = 0


Query: 10  GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 69
           GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD
Sbjct: 172 GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 231

Query: 70  RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE 129
           RIIMNKIDLVS +ELE+L RKIKRINAMAQV L KFGSVD+DFVLGVGGYDLDRIDSQVE
Sbjct: 232 RIIMNKIDLVSQDELEELMRKIKRINAMAQVNLAKFGSVDVDFVLGVGGYDLDRIDSQVE 291

Query: 130 ANSCSGDHKHEAEHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 189
           AN+CSGDHKHE +HEHHKG     HHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI
Sbjct: 292 ANTCSGDHKHENKHEHHKG-----HHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 351

Query: 190 EEKGDDLYRMKGVLSVNGYEQRYVFQGVHSILDGCPGKAWGSDEKRINKLVFIGKNLDET 249
           EEKG+DLYRMKGVLSVNGYEQRYVFQGVHSILDGCPGKAW  DEKRINKLVFIGKNLDET
Sbjct: 352 EEKGEDLYRMKGVLSVNGYEQRYVFQGVHSILDGCPGKAWAPDEKRINKLVFIGKNLDET 411

Query: 250 ALRKGFKGCLI 261
           ALRKGFKGCL+
Sbjct: 412 ALRKGFKGCLL 417

[Close]

BLAST of HG10002969 vs. ExPASy TrEMBL
Match: A0A6J1L061 (uncharacterized protein LOC111498658 OS=Cucurbita maxima OX=3661 GN=LOC111498658 PE=3 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 6.1e-122
Identity = 229/251 (91.24%), Postives = 237/251 (94.42%), Query Frame = 0


Query: 10  GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 69
           GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD
Sbjct: 173 GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 232

Query: 70  RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE 129
           RII+NKIDLVSP+ELE+LT KIKRINAMAQVKL KFG VD+DFVLGVGGYDLDRIDSQVE
Sbjct: 233 RIIINKIDLVSPDELEELTLKIKRINAMAQVKLAKFGDVDVDFVLGVGGYDLDRIDSQVE 292

Query: 130 ANSCSGDHKHEAEHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 189
           AN+    HKHE EHE HKGHD HHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI
Sbjct: 293 ANT----HKHETEHE-HKGHD-HHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 352

Query: 190 EEKGDDLYRMKGVLSVNGYEQRYVFQGVHSILDGCPGKAWGSDEKRINKLVFIGKNLDET 249
           EEKG+DLYRMKGVLSV GYEQRYVFQGVHSILDGCPGK WG DEKR+NKLVFIGKNLDET
Sbjct: 353 EEKGEDLYRMKGVLSVKGYEQRYVFQGVHSILDGCPGKEWGPDEKRVNKLVFIGKNLDET 412

Query: 250 ALRKGFKGCLI 261
           ALRKGFKGC +
Sbjct: 413 ALRKGFKGCFM 417

[Close]

BLAST of HG10002969 vs. ExPASy TrEMBL
Match: A0A6J1GBQ4 (uncharacterized protein LOC111452522 OS=Cucurbita moschata OX=3662 GN=LOC111452522 PE=3 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.3e-121
Identity = 228/251 (90.84%), Postives = 237/251 (94.42%), Query Frame = 0


Query: 10  GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 69
           GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD
Sbjct: 173 GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 232

Query: 70  RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE 129
           RIIMNKIDLVSP+ELE+LT KIKRINAMAQ+K  KFG VD+DFVLGVGGYDLDRIDSQVE
Sbjct: 233 RIIMNKIDLVSPDELEELTLKIKRINAMAQLKRAKFGDVDVDFVLGVGGYDLDRIDSQVE 292

Query: 130 ANSCSGDHKHEAEHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 189
           AN+    HKHE +HE HKGHD HHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI
Sbjct: 293 ANT----HKHETKHE-HKGHD-HHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLERLI 352

Query: 190 EEKGDDLYRMKGVLSVNGYEQRYVFQGVHSILDGCPGKAWGSDEKRINKLVFIGKNLDET 249
           EEKG+DLYRMKGVLSV GYEQRYVFQGVHSILDGCPGK WG DEKR+NKLVFIGKNLDET
Sbjct: 353 EEKGEDLYRMKGVLSVKGYEQRYVFQGVHSILDGCPGKEWGPDEKRVNKLVFIGKNLDET 412

Query: 250 ALRKGFKGCLI 261
           ALRKGFKGCL+
Sbjct: 413 ALRKGFKGCLM 417

[Close]

BLAST of HG10002969 vs. TAIR 10
Match: AT1G80480.1 (plastid transcriptionally active 17 )

HSP 1 Score: 297.4 bits (760), Expect = 1.2e-80
Identity = 151/261 (57.85%), Postives = 192/261 (73.56%), Query Frame = 0


Query: 10  GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 69
           GLA PAP+I+TF  +E +   VKLDGVVTLVD+KHA  HL+EVKP  VVNEAVEQ+AYAD
Sbjct: 185 GLANPAPIIQTFYAEEEIFNDVKLDGVVTLVDAKHARLHLDEVKPEGVVNEAVEQIAYAD 244

Query: 70  RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE 129
           RII+NK DLV   EL  + ++IK IN+MAQ+  TK+G+VD+D+VLG+GG+DL+RI+S V 
Sbjct: 245 RIIVNKTDLVGEAELGSVVQRIKTINSMAQMTRTKYGNVDLDYVLGIGGFDLERIESSVN 304

Query: 130 ANSCSG----------DHKHEAEHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLD 189
            +              DH H+ +H HH GHD HHHH HDH HD  VSSVSIV EG LDL+
Sbjct: 305 EDDKGDHHDHDHDHHHDHNHDHDHHHHDGHD-HHHHSHDHTHDPGVSSVSIVCEGSLDLE 364

Query: 190 EVDDWLERLIEEKGDDLYRMKGVLSVNGYEQRYVFQGVHSILDGCPGKAWGSDEKRINKL 249
           + + WL  L+ E+ +D+YRMKG+LSV+  E+R+VFQGVH I  G P + WG +E+R+NK+
Sbjct: 365 KANMWLGTLLMERSEDIYRMKGLLSVHTMEERFVFQGVHDIFQGSPDRLWGREEERVNKI 424

Query: 250 VFIGKNLDETALRKGFKGCLI 261
           VFIGKNL+   L KGFK CLI
Sbjct: 425 VFIGKNLNREELEKGFKACLI 444

[Close]

BLAST of HG10002969 vs. TAIR 10
Match: AT1G15730.1 (Cobalamin biosynthesis CobW-like protein )

HSP 1 Score: 275.4 bits (703), Expect = 4.7e-74
Identity = 141/261 (54.02%), Postives = 180/261 (68.97%), Query Frame = 0


Query: 10  GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 69
           GLA PAP+I+TF  ++ +   VKLDGVVTLVD+KHA  HL+EVKP   VNEAVEQ+AYAD
Sbjct: 188 GLANPAPIIQTFYAEDEIFNDVKLDGVVTLVDAKHARLHLDEVKPEGYVNEAVEQIAYAD 247

Query: 70  RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYDLDRIDSQVE 129
           RII+NK DLV   EL  + ++IK IN+MA +K TK+G VD+D+VLG+GG+DL+RI+S V 
Sbjct: 248 RIIVNKTDLVGEPELASVMQRIKTINSMAHMKRTKYGKVDLDYVLGIGGFDLERIESSVN 307

Query: 130 ANSCSGDHKHEAEHEHHKGHDHH----------HHHHHDHVHDSAVSSVSIVSEGLLDLD 189
                    H+  H  H  HDHH          HHH HDH HD  V SVSIV EG LDL+
Sbjct: 308 EEEKEDREGHDDHHHGHDCHDHHNEHEHEHEHEHHHSHDHTHDPGVGSVSIVCEGDLDLE 367

Query: 190 EVDDWLERLIEEKGDDLYRMKGVLSVNGYEQRYVFQGVHSILDGCPGKAWGSDEKRINKL 249
           + + WL  L+ ++ +D+YRMKG+LSV   ++R+VFQGVH I +G P + W  DE R NK+
Sbjct: 368 KANMWLGALLYQRSEDIYRMKGILSVQDMDERFVFQGVHEIFEGSPDRLWRKDETRTNKI 427

Query: 250 VFIGKNLDETALRKGFKGCLI 261
           VFIGKNL+   L  GF+ CLI
Sbjct: 428 VFIGKNLNREELEMGFRACLI 448

[Close]

BLAST of HG10002969 vs. TAIR 10
Match: AT1G26520.1 (Cobalamin biosynthesis CobW-like protein )

HSP 1 Score: 152.9 bits (385), Expect = 3.5e-37
Identity = 91/254 (35.83%), Postives = 135/254 (53.15%), Query Frame = 0


Query: 10  GLAKPAPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEAVEQVAYAD 69
           GLA PAP+      D+ +   VKLD +VT+VD+K+    LNE +      EA  Q+A+AD
Sbjct: 140 GLANPAPLASILWLDDQLESEVKLDCIVTVVDAKNLRFQLNERRDSSSFPEAFNQIAFAD 199

Query: 70  RIIMNKIDLVSPEELEQLTRKIKRINAMAQVKLTKFGSVDIDFVLGVGGYD---LDRIDS 129
            IIMNK+DL+S EE ++L ++I  IN++A V  +    VD+  +L    YD   + R++S
Sbjct: 200 TIIMNKVDLISQEESDELEKEIHSINSLANVIRSVRCQVDLSNILNCQAYDSTHVSRLES 259

Query: 130 QVEANSCSGDHKHEAEHEHHKGHDHHHHHHHDHVHDSAVSSVSIVSEGLLDLDEVDDWLE 189
            +EAN                            +HDS V ++ I     ++LD+V  WLE
Sbjct: 260 LLEANKSLTT---------------------TDLHDSGVRTLCISEPQPINLDKVRLWLE 319

Query: 190 RLIEEKGD--DLYRMKGVLSVNGYEQRYVFQGVHSILDGCPGKAWGSDEKRINKLVFIGK 249
            ++ +K    D+YR K VLS+   +Q ++ Q V  I +  P + W  +E R NK+VFIG 
Sbjct: 320 EILWDKKSEMDVYRCKAVLSIQNSDQMHILQAVRDIYEIVPARKWSEEENRTNKIVFIGH 372

Query: 250 NLDETALRKGFKGC 259
            LDE  LR G + C
Sbjct: 380 KLDEEVLRSGLRDC 372

The following BLAST results are available for this feature:

BLAST of HG10002969 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146192.1	1.3e-134	97.21	uncharacterized protein LOC101208167 [Cucumis sativus] >KGN55722.2 hypothetical ...	[more]
XP_016900579.1	5.5e-133	96.81	PREDICTED: COBW domain-containing protein 1-like [Cucumis melo]	[more]
XP_038877154.1	1.3e-131	97.21	P-loop guanosine triphosphatase YjiA-like [Benincasa hispida]	[more]
TYK11456.1	1.3e-129	95.58	COBW domain-containing protein 1-like [Cucumis melo var. makuwa]	[more]
XP_022145260.1	1.9e-125	92.43	uncharacterized protein LOC111014757 [Momordica charantia]	[more]

BLAST of HG10002969 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9BRT8	4.2e-27	30.74	COBW domain-containing protein 1 OS=Homo sapiens OX=9606 GN=CBWD1 PE=1 SV=1	[more]
Q5JTY5	4.2e-27	31.13	COBW domain-containing protein 3 OS=Homo sapiens OX=9606 GN=CBWD3 PE=1 SV=1	[more]
Q5RIA9	4.2e-27	31.13	COBW domain-containing protein 5 OS=Homo sapiens OX=9606 GN=CBWD5 PE=2 SV=1	[more]
Q8IUF1	7.2e-27	30.74	COBW domain-containing protein 2 OS=Homo sapiens OX=9606 GN=CBWD2 PE=2 SV=1	[more]
Q4V339	9.3e-27	30.74	COBW domain-containing protein 6 OS=Homo sapiens OX=9606 GN=CBWD6 PE=3 SV=1	[more]

BLAST of HG10002969 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DX71	2.6e-133	96.81	COBW domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103491113 PE...	[more]
A0A5D3CM14	6.1e-130	95.58	COBW domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1CTY9	9.1e-126	92.43	uncharacterized protein LOC111014757 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1L061	6.1e-122	91.24	uncharacterized protein LOC111498658 OS=Cucurbita maxima OX=3661 GN=LOC111498658...	[more]
A0A6J1GBQ4	2.3e-121	90.84	uncharacterized protein LOC111452522 OS=Cucurbita moschata OX=3662 GN=LOC1114525...	[more]

BLAST of HG10002969 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80480.1	1.2e-80	57.85	plastid transcriptionally active 17	[more]
AT1G15730.1	4.7e-74	54.02	Cobalamin biosynthesis CobW-like protein	[more]
AT1G26520.1	3.5e-37	35.83	Cobalamin biosynthesis CobW-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011629	Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal	SMART	SM00833	CobW_C_3	coord: 165..259 e-value: 5.6E-12 score: 55.8
IPR011629	Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal	PFAM	PF07683	CobW_C	coord: 165..259 e-value: 2.1E-21 score: 75.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 8..119 e-value: 4.3E-24 score: 87.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 27..128
IPR003495	CobW/HypB/UreG, nucleotide-binding domain	PFAM	PF02492	cobW	coord: 9..100 e-value: 3.0E-15 score: 56.2
IPR036627	CobW-like, C-terminal domain superfamily	GENE3D	3.30.1220.10		coord: 134..259 e-value: 9.5E-35 score: 120.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..147
None	No IPR available	PANTHER	PTHR13748	COBW-RELATED	coord: 9..260
None	No IPR available	PANTHER	PTHR13748:SF40	OSJNBA0083N12.6 PROTEIN	coord: 9..260
None	No IPR available	SUPERFAMILY	90002	Hypothetical protein YjiA, C-terminal domain	coord: 165..259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002969.1	HG10002969.1	mRNA