HG10002946 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTGAAGGTATATTTCTCTCTCATTCTTCTTCTGAAATCTCAATTTCTTTTAGTTATTAGCTTCCAATCTCTCCCTCTCTCTCTTTTTGCCATTTTCTTGTTCGATCAGCACTTGAATTCTTCGTTTAGAGTGGCTGATTCGATGCCGAACGATAATGCTTTAGCTTTTTCTTGGTGATGATTTTGGCGTTGAATTTAAGAACTTCTGCAGATCGCTGCATGTCTTCTGTTTAGCGCCATCGTCGCGCATTGCTAGTATGTTAGATTTTGTTACCCTTCCTTGGGATGCCTTTTGTTGGATTTATCTTTTCGGATCTGTTTTTGAGTCTATCTGTGTTGTCCTCAGAATTAACGACATCGACATCTGGTAGTTTCCAGATCGACAGCCGTGAAAATCTATGGAGATATGCTGTTATTCCTTGATTATATTATACAACTTCCTTCTCTCCCTGTTCATTGTTTTTCCTGGCTTGATTTGCATGGATGTACTGCGACGACGACGGCCAAAATTAGGTCAGGTTGAAACTTAGATCCGAGGTTGGAAATGGCATCATGGTCTTCGCTTTGCAATCTCCGCCATTCCTCCTTTTTTCGGAAAAAAGTGGAATGACAAAGCAAAAGTGGTTTTCCAACGAGAATATACCATTTAATGACTTTCAGTAATGATTGAGTCAGATCACGGATAAGTTGGAAAACGGAGACTGTAATAAAGTTATTTTGCAGTTATTAGAATGCTGACTCGATTTTATTCCTGTTTCTTTTTGTTGTTTCCAAATTGATTGCTTGATTGAACTTGTGCATGATCTCTGGGTTATTACCCTATAACAGGACTGTAGATGTTAGGGCAATAAGTGCTGAAAATTGTAAGAACACGATATCTTTGCTCTGTTCTACGGTACTAAAATATTGTAGTTTGTATCACAACTTGATGAGGCTGAGTTTTGCAGGAGGAGTTTGAGGAGTATGCTGAGAAAGCCAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAGGCCACTGTTGGAACCGTGAACACTAGTAAGTTCTTTCTTTCACTGAATGGAATTCCTAAAGAAAATTGTTTATAGTTAGAATTATGTGATCAAATTCTCCAATCTAACCTTTTATTGCAATTATGACTGATTTCTAGGCCGACCTGGAGTGTTCAACCAGAGGGACAGAGCCAAATGGGATGCCTGGAAGGCTGTTGAAGGTAATTTTTCTGAATGTTTAAGCATCTGTCAGAACAGTTTTGTCGATTGTTCTTTAGGGGAAAAGTGAGATTGAGAATTGATATTAATGAATTCAACACTATGAAATGGATCTTTTCTATTTTTGCGATGACATTGAAATACTCTTTACTGCAATCAACTCTATTAAGATTAAAGATTTACCTTAATCTAAAATGTACCAGAATGAGCTTAACTGAAGAGAATCAAATATTTTTGCAGCGAAATCCAAGGAAGATGCAATGAGCGACTACATCACCAAGGTGAAACAGTTGCAAGAGGCAGCTTCTGCTAGCTGA ATGGGTTTGAAGGAGGAGTTTGAGGAGTATGCTGAGAAAGCCAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAGGCCACTGTTGGAACCGTGAACACTAGCCGACCTGGAGTGTTCAACCAGAGGGACAGAGCCAAATGGGATGCCTGGAAGGCTGTTGAAGCGAAATCCAAGGAAGATGCAATGAGCGACTACATCACCAAGGTGAAACAGTTGCAAGAGGCAGCTTCTGCTAGCTGA ATGGGTTTGAAGGAGGAGTTTGAGGAGTATGCTGAGAAAGCCAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAGGCCACTGTTGGAACCGTGAACACTAGCCGACCTGGAGTGTTCAACCAGAGGGACAGAGCCAAATGGGATGCCTGGAAGGCTGTTGAAGCGAAATCCAAGGAAGATGCAATGAGCGACTACATCACCAAGGTGAAACAGTTGCAAGAGGCAGCTTCTGCTAGCTGA MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGTVNTSRPGVFNQRDRAKWDAWKAVEAKSKEDAMSDYITKVKQLQEAASAS Homology
BLAST of HG10002946 vs. NCBI nr
Match: XP_022923252.1 (acyl-CoA-binding protein [Cucurbita moschata] >XP_022965372.1 acyl-CoA-binding protein [Cucurbita maxima] >XP_023551848.1 acyl-CoA-binding protein [Cucurbita pepo subsp. pepo] >KAG6577760.1 hypothetical protein SDJN03_25334, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015799.1 hypothetical protein SDJN02_23437 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 169.5 bits (428), Expect = 1.3e-38 Identity = 85/89 (95.51%), Postives = 88/89 (98.88%), Query Frame = 0
BLAST of HG10002946 vs. NCBI nr
Match: XP_038876585.1 (acyl-CoA-binding protein [Benincasa hispida]) HSP 1 Score: 169.5 bits (428), Expect = 1.3e-38 Identity = 85/89 (95.51%), Postives = 88/89 (98.88%), Query Frame = 0
BLAST of HG10002946 vs. NCBI nr
Match: XP_022145449.1 (acyl-CoA-binding protein [Momordica charantia]) HSP 1 Score: 166.0 bits (419), Expect = 1.5e-37 Identity = 82/89 (92.13%), Postives = 88/89 (98.88%), Query Frame = 0
BLAST of HG10002946 vs. NCBI nr
Match: XP_023005811.1 (acyl-CoA-binding domain-containing protein 1-like [Cucurbita maxima]) HSP 1 Score: 165.6 bits (418), Expect = 1.9e-37 Identity = 83/89 (93.26%), Postives = 87/89 (97.75%), Query Frame = 0
BLAST of HG10002946 vs. NCBI nr
Match: XP_022937196.1 (acyl-CoA-binding domain-containing protein 1 [Cucurbita moschata] >XP_023540555.1 acyl-CoA-binding domain-containing protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 165.6 bits (418), Expect = 1.9e-37 Identity = 83/89 (93.26%), Postives = 87/89 (97.75%), Query Frame = 0
BLAST of HG10002946 vs. ExPASy Swiss-Prot
Match: Q75G87 (Acyl-CoA-binding domain-containing protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ACBP3 PE=2 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 7.6e-37 Identity = 76/88 (86.36%), Postives = 83/88 (94.32%), Query Frame = 0
BLAST of HG10002946 vs. ExPASy Swiss-Prot
Match: Q84SC3 (Acyl-CoA-binding domain-containing protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ACBP1 PE=1 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 2.2e-36 Identity = 75/89 (84.27%), Postives = 84/89 (94.38%), Query Frame = 0
BLAST of HG10002946 vs. ExPASy Swiss-Prot
Match: O04066 (Acyl-CoA-binding protein OS=Ricinus communis OX=3988 PE=3 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 3.8e-36 Identity = 76/89 (85.39%), Postives = 82/89 (92.13%), Query Frame = 0
BLAST of HG10002946 vs. ExPASy Swiss-Prot
Match: Q5VRM0 (Acyl-CoA-binding domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ACBP2 PE=1 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 3.0e-33 Identity = 70/89 (78.65%), Postives = 79/89 (88.76%), Query Frame = 0
BLAST of HG10002946 vs. ExPASy Swiss-Prot
Match: O22643 (Acyl-CoA-binding protein OS=Fritillaria agrestis OX=64177 GN=ACABP PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 4.3e-32 Identity = 68/87 (78.16%), Postives = 78/87 (89.66%), Query Frame = 0
BLAST of HG10002946 vs. ExPASy TrEMBL
Match: A0A6J1HK57 (acyl-CoA-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111465252 PE=3 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 6.4e-39 Identity = 85/89 (95.51%), Postives = 88/89 (98.88%), Query Frame = 0
BLAST of HG10002946 vs. ExPASy TrEMBL
Match: A0A6J1E5N1 (acyl-CoA-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111430996 PE=3 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 6.4e-39 Identity = 85/89 (95.51%), Postives = 88/89 (98.88%), Query Frame = 0
BLAST of HG10002946 vs. ExPASy TrEMBL
Match: A0A6J1CVA5 (acyl-CoA-binding protein OS=Momordica charantia OX=3673 GN=LOC111014892 PE=3 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 7.1e-38 Identity = 82/89 (92.13%), Postives = 88/89 (98.88%), Query Frame = 0
BLAST of HG10002946 vs. ExPASy TrEMBL
Match: A0A6J1KW16 (acyl-CoA-binding domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111498704 PE=3 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 9.3e-38 Identity = 83/89 (93.26%), Postives = 87/89 (97.75%), Query Frame = 0
BLAST of HG10002946 vs. ExPASy TrEMBL
Match: A0A6J1F9P6 (acyl-CoA-binding domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111443564 PE=3 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 9.3e-38 Identity = 83/89 (93.26%), Postives = 87/89 (97.75%), Query Frame = 0
BLAST of HG10002946 vs. TAIR 10
Match: AT1G31812.1 (acyl-CoA-binding protein 6 ) HSP 1 Score: 126.3 bits (316), Expect = 1.2e-29 Identity = 63/88 (71.59%), Postives = 74/88 (84.09%), Query Frame = 0
BLAST of HG10002946 vs. TAIR 10
Match: AT5G53470.1 (acyl-CoA binding protein 1 ) HSP 1 Score: 57.0 bits (136), Expect = 9.0e-09 Identity = 32/75 (42.67%), Postives = 39/75 (52.00%), Query Frame = 0
BLAST of HG10002946 vs. TAIR 10
Match: AT4G27780.1 (acyl-CoA binding protein 2 ) HSP 1 Score: 49.7 bits (117), Expect = 1.4e-06 Identity = 27/69 (39.13%), Postives = 35/69 (50.72%), Query Frame = 0
BLAST of HG10002946 vs. TAIR 10
Match: AT3G05420.1 (acyl-CoA binding protein 4 ) HSP 1 Score: 46.6 bits (109), Expect = 1.2e-05 Identity = 20/63 (31.75%), Postives = 36/63 (57.14%), Query Frame = 0
BLAST of HG10002946 vs. TAIR 10
Match: AT3G05420.2 (acyl-CoA binding protein 4 ) HSP 1 Score: 46.6 bits (109), Expect = 1.2e-05 Identity = 20/63 (31.75%), Postives = 36/63 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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