HG10002892 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGCTCACCTTCCGCCGGAGCAAAACCACCTCGAAAAATTCGACGTCTTCAAGATCAAAGGCAGAGACAAACAAGGCCGCCGCATTCTACGCATCACCGGAAAATTCTTTCCAGGTTTCCTCTCTTTCTCTCTCATTCTTTTTGCTATTGAGTTTGAATGTGCTCAAGAAACATCTGTATATTTATCTTACTATGTTCTGATCTGATACTGTTTCTTGCTCTTTTCGTCGCGATGAAATTTATTTTCTATCGTCATCATCCTCGGCGCGGGCTGTGAATTTAAATTCGCTCAAGTAGCATCAGAATATTTAGCCCTAATCTGCTATGATTCAATTTTCTTGCTCTGCTCTGCTTTGATTTACTTGTTCTTTTTTATCAATTTGAATTTTCGTAGAGAAGTATGCTCTGATTCTGTTTTCTTGCTCTTTTCGATCGAATTGAATTTTCGTCGGGAAGCATCTGTGAATTAGCGTTACTATGCACTGGTTATATTTTAATTTCTTGCTATTTTCATGAGAGGAATTGAAATTGAGTTTGGACTGTGCTTAAGAAGTATCTGCATATTTGAACTGGCTGCTATGCTTCGATTCTAATTTCTTGCGGTTTTAAGCGATGAGATTGAATTTTCTGTTATCTGTTTTGAAAATCAGCGCGGATTGTGAGTTTAGATGTGCTGAAAAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTTCATACCGGTGTTCAAAGGAGCCAAAATTTTCCCGGAATCGCCGCCCTCCGGTCAATCTACGACGCAATTCCGGCCGCCGTCAAGGCTAATCTCGAAGCCGTGTATTTCGTTCACCCAGACCTCCAGGCCAGACTCTTCCTCGCCACTCTCGGCCGCATTTTCTTCACCAGCGAGTACTTTTTTCTAACCTTTCTCCTTTAATCAATTTCACTTTTCCCTATATTCTTCTTCTCAATATTCTTGAATATAGTAATAATTTTATATTCTTTTCAACATATAAAATACTGTAACCAAATTTGGTACAAGAATTTTAGAGAAAATTAGAATTTAGCTCAAAACCTTCCTATATTATTATGGTGATTTTATCAAACCTTTATAAAGTTGAAGATGTATTAAATACTTTTAAGGTTACTAAAATGTATTAAACTAAAATATAACTTAAAAAATTTAGGAACTAAATTTATAATTGAATTCTTTACTTTTAAGACGTAACGTTATGTATCAATTAAAAAGGTTAAAACATTAATAAACTGATAAGGATAGAAAAAGAAAAGATGGGAATAACAATTGATGAGATTAGTAATATTAATTTTGTGGTTAATGAGGGGGGAATGTTCGAATGTGGTAGGGTATATGGAAAGGTGAGGTACGTGAGTAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAATTCATATATGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTTGAGAGTGATCATCCTAGGGTCTACGGTGCACCCTCAGTCGAATCGCACGTGTACTCCATGAGGTGTATTTCATAA ATGGCCGCTCACCTTCCGCCGGAGCAAAACCACCTCGAAAAATTCGACGTCTTCAAGATCAAAGGCAGAGACAAACAAGGCCGCCGCATTCTACGCATCACCGGAAAATTCTTTCCAGCGCGGATTGTGAGTTTAGATGTGCTGAAAAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTTCATACCGGTGTTCAAAGGAGCCAAAATTTTCCCGGAATCGCCGCCCTCCGGTCAATCTACGACGCAATTCCGGCCGCCGTCAAGGCTAATCTCGAAGCCGTGTATTTCGTTCACCCAGACCTCCAGGCCAGACTCTTCCTCGCCACTCTCGGCCGCATTTTCTTCACCAGCGAGGTATATGGAAAGGTGAGGTACGTGAGTAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAATTCATATATGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTTGAGAGTGATCATCCTAGGGTCTACGGTGCACCCTCAGTCGAATCGCACGTGTACTCCATGAGGTGTATTTCATAA ATGGCCGCTCACCTTCCGCCGGAGCAAAACCACCTCGAAAAATTCGACGTCTTCAAGATCAAAGGCAGAGACAAACAAGGCCGCCGCATTCTACGCATCACCGGAAAATTCTTTCCAGCGCGGATTGTGAGTTTAGATGTGCTGAAAAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTTCATACCGGTGTTCAAAGGAGCCAAAATTTTCCCGGAATCGCCGCCCTCCGGTCAATCTACGACGCAATTCCGGCCGCCGTCAAGGCTAATCTCGAAGCCGTGTATTTCGTTCACCCAGACCTCCAGGCCAGACTCTTCCTCGCCACTCTCGGCCGCATTTTCTTCACCAGCGAGGTATATGGAAAGGTGAGGTACGTGAGTAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAATTCATATATGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTTGAGAGTGATCATCCTAGGGTCTACGGTGCACCCTCAGTCGAATCGCACGTGTACTCCATGAGGTGTATTTCATAA MAAHLPPEQNHLEKFDVFKIKGRDKQGRRILRITGKFFPARIVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS Homology
BLAST of HG10002892 vs. NCBI nr
Match: XP_004146166.1 (ganglioside-induced differentiation-associated protein 2 [Cucumis sativus] >KGN55625.1 hypothetical protein Csa_010698 [Cucumis sativus]) HSP 1 Score: 394.0 bits (1011), Expect = 7.4e-106 Identity = 195/201 (97.01%), Postives = 197/201 (98.01%), Query Frame = 0
BLAST of HG10002892 vs. NCBI nr
Match: XP_038905989.1 (ganglioside-induced differentiation-associated protein 2 [Benincasa hispida]) HSP 1 Score: 391.0 bits (1003), Expect = 6.3e-105 Identity = 191/193 (98.96%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of HG10002892 vs. NCBI nr
Match: XP_008448498.1 (PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis melo]) HSP 1 Score: 387.9 bits (995), Expect = 5.3e-104 Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of HG10002892 vs. NCBI nr
Match: XP_022923521.1 (ganglioside-induced differentiation-associated protein 2-like [Cucurbita moschata] >XP_023007626.1 ganglioside-induced differentiation-associated protein 2-like [Cucurbita maxima] >KAG6577807.1 Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015847.1 Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 375.9 bits (964), Expect = 2.1e-100 Identity = 181/193 (93.78%), Postives = 188/193 (97.41%), Query Frame = 0
BLAST of HG10002892 vs. NCBI nr
Match: XP_023553442.1 (ganglioside-induced differentiation-associated protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 373.6 bits (958), Expect = 1.0e-99 Identity = 180/193 (93.26%), Postives = 187/193 (96.89%), Query Frame = 0
BLAST of HG10002892 vs. ExPASy Swiss-Prot
Match: Q7JUR6 (Protein GDAP2 homolog OS=Drosophila melanogaster OX=7227 GN=Gdap2 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.3e-12 Identity = 40/140 (28.57%), Postives = 76/140 (54.29%), Query Frame = 0
BLAST of HG10002892 vs. ExPASy Swiss-Prot
Match: Q292F9 (Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA15091 PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.3e-12 Identity = 40/140 (28.57%), Postives = 76/140 (54.29%), Query Frame = 0
BLAST of HG10002892 vs. ExPASy Swiss-Prot
Match: A7T167 (Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.0e-09 Identity = 35/140 (25.00%), Postives = 72/140 (51.43%), Query Frame = 0
BLAST of HG10002892 vs. ExPASy Swiss-Prot
Match: Q0IHU9 (Protein prune homolog 2 OS=Xenopus tropicalis OX=8364 GN=Prune2 PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 3.4e-05 Identity = 30/100 (30.00%), Postives = 51/100 (51.00%), Query Frame = 0
BLAST of HG10002892 vs. ExPASy TrEMBL
Match: A0A0A0L0Z7 (CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002450 PE=4 SV=1) HSP 1 Score: 394.0 bits (1011), Expect = 3.6e-106 Identity = 195/201 (97.01%), Postives = 197/201 (98.01%), Query Frame = 0
BLAST of HG10002892 vs. ExPASy TrEMBL
Match: A0A1S3BJ81 (ganglioside-induced differentiation-associated protein 2 OS=Cucumis melo OX=3656 GN=LOC103490659 PE=4 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 2.6e-104 Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of HG10002892 vs. ExPASy TrEMBL
Match: A0A6J1L134 (ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111500201 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 1.0e-100 Identity = 181/193 (93.78%), Postives = 188/193 (97.41%), Query Frame = 0
BLAST of HG10002892 vs. ExPASy TrEMBL
Match: A0A6J1E710 (ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111431194 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 1.0e-100 Identity = 181/193 (93.78%), Postives = 188/193 (97.41%), Query Frame = 0
BLAST of HG10002892 vs. ExPASy TrEMBL
Match: A0A6J1I6H6 (ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111470075 PE=4 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 2.5e-99 Identity = 182/193 (94.30%), Postives = 185/193 (95.85%), Query Frame = 0
BLAST of HG10002892 vs. TAIR 10
Match: AT4G35750.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein ) HSP 1 Score: 285.8 bits (730), Expect = 2.6e-77 Identity = 134/193 (69.43%), Postives = 163/193 (84.46%), Query Frame = 0
BLAST of HG10002892 vs. TAIR 10
Match: AT3G10210.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein ) HSP 1 Score: 170.6 bits (431), Expect = 1.2e-42 Identity = 74/166 (44.58%), Postives = 115/166 (69.28%), Query Frame = 0
BLAST of HG10002892 vs. TAIR 10
Match: AT1G69340.1 (appr-1-p processing enzyme family protein ) HSP 1 Score: 64.3 bits (155), Expect = 1.3e-10 Identity = 35/140 (25.00%), Postives = 76/140 (54.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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