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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCTCTAAAGGTATTGCGTGGAAAAGATGCTCTCTGGAGAAAGGTTGTAGTGGTCAAATTTGGTCGTACTCACAATTTCTGGCTGGGGAAAGGTAATCTGGGCTCTTCTAAAGGCCCTTGGAAAGACATTTACTATCTCGAAAAGGATTTTGCTAAACGAATCAAAATCTTTGTTGGTTCGGACTTTTCCACAAGCTCTTGGAAGGATCATCGGATAGGGTTAGCCCCCTTTCCTGATCTCTTCCTAAAATTTATGCCCTGGCTAAGTGCAAATCTTTTTTGGCTGTTTGGTCTTTGCAGAAACCTTTTGGATGATTGA mRNA sequence ATGGCTCTAAAGGTATTGCGTGGAAAAGATGCTCTCTGGAGAAAGGTTGTAGTGGTCAAATTTGGTCGTACTCACAATTTCTGGCTGGGGAAAGGTAATCTGGGCTCTTCTAAAGGCCCTTGGAAAGACATTTACTATCTCGAAAAGGATTTTGCTAAACGAATCAAAATCTTTGTTGGTTCGGACTTTTCCACAAGCTCTTGGAAGGATCATCGGATAGGAAACCTTTTGGATGATTGA Coding sequence (CDS) ATGGCTCTAAAGGTATTGCGTGGAAAAGATGCTCTCTGGAGAAAGGTTGTAGTGGTCAAATTTGGTCGTACTCACAATTTCTGGCTGGGGAAAGGTAATCTGGGCTCTTCTAAAGGCCCTTGGAAAGACATTTACTATCTCGAAAAGGATTTTGCTAAACGAATCAAAATCTTTGTTGGTTCGGACTTTTCCACAAGCTCTTGGAAGGATCATCGGATAGGAAACCTTTTGGATGATTGA Protein sequence MALKVLRGKDALWRKVVVVKFGRTHNFWLGKGNLGSSKGPWKDIYYLEKDFAKRIKIFVGSDFSTSSWKDHRIGNLLDD
Homology
BLAST of HG10002857 vs. NCBI nr
Match: XP_026428977.1 (uncharacterized protein LOC113324916 [Papaver somniferum]) HSP 1 Score: 56.6 bits (135), Expect = 1.1e-04 Identity = 30/75 (40.00%), Postives = 41/75 (54.67%), Query Frame = 0
Query: 1 MALKVLRGKDALWRKVVVVKFGRTHNFWLGKGNLGSSKGP-WKDIYYLEKDFAKRIKIFV 60
M + + R +DALWRK +V KFG T W GS G W +IY +DF K I+ +
Sbjct: 1 MVVALWRREDALWRKTMVEKFGETFTDWETLQPKGSKGGSLWFNIYKELEDFNKSIRFKI 60
Query: 61 GSDFSTSSWKDHRIG 75
G+D T W+D +G
Sbjct: 61 GADKETRFWEDSWLG 75
BLAST of HG10002857 vs. NCBI nr
Match: XP_030479135.1 (uncharacterized protein LOC115696374 [Cannabis sativa]) HSP 1 Score: 53.5 bits (127), Expect = 9.5e-04 Identity = 23/67 (34.33%), Postives = 38/67 (56.72%), Query Frame = 0
Query: 10 DALWRKVVVVKFGRTHNFWLGK-GNLGSSKGPWKDIYYLEKDFAKRIKIFVGSDFSTSSW 69
++LW +V+ ++G +NFW K G S +GPWKDI L ++ + +K VG W
Sbjct: 12 ESLWHRVIESRYGLANNFWDSKRGERMSPRGPWKDIADLYDEYLRLVKFKVGKGDKIRFW 71
Query: 70 KDHRIGN 76
+D +G+
Sbjct: 72 EDEWLGD 78
BLAST of HG10002857 vs. ExPASy TrEMBL
Match: A0A803QQM3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.1e-05 Identity = 27/66 (40.91%), Postives = 38/66 (57.58%), Query Frame = 0
Query: 10 DALWRKVVVVKFGRTHNFWLGK-GNLGSSKGPWKDIYYLEKDFAKRIKIFVGSDFSTSSW 69
++LW KV+ ++GR NFW K G S +GPWKDI L ++ K +K VG+ W
Sbjct: 1804 NSLWHKVIKSRYGRADNFWDTKHGVRLSPRGPWKDISDLYDEYGKLVKFKVGNGACIRFW 1863
Query: 70 KDHRIG 75
+D IG
Sbjct: 1864 EDEWIG 1869
BLAST of HG10002857 vs. ExPASy TrEMBL
Match: A0A803QEA6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.7e-04 Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 0
Query: 10 DALWRKVVVVKFGRTHNFWLGK-GNLGSSKGPWKDIYYLEKDFAKRIKIFVGSDFSTSSW 69
++LW KV+ ++G+ NFW K G S +GPWKDI L ++ K +K VG+ W
Sbjct: 1231 NSLWHKVIKSRYGKADNFWDTKQGVRISPRGPWKDISDLYDEYGKLVKFKVGNGERIRFW 1290
Query: 70 KDHRIG 75
+D +G
Sbjct: 1291 EDEWVG 1296
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| XP_026428977.1 | 1.1e-04 | 40.00 | uncharacterized protein LOC113324916 [Papaver somniferum] | [more] |
| XP_030479135.1 | 9.5e-04 | 34.33 | uncharacterized protein LOC115696374 [Cannabis sativa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A803QQM3 | 7.1e-05 | 40.91 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
| A0A803QEA6 | 2.7e-04 | 37.88 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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