HG10002421 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002421
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	17.4 kDa class III heat shock protein
Location	Chr11: 6569363 .. 6570877 (-)
RNA-Seq Expression	HG10002421
Synteny	HG10002421

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAGGGCCGCCGATTCGAATTCATCCAACGGACATTTGGTTCAAGCCGTGAGTACCCTCTTCCCTTTCCCTGAAACTCTTGAGAAATTTGTGTTCAATTCTGGTGCTCCCGATGCTCGTGATTCTAAACCCATCTCCACCATTCCAACTGATATCTTGGACACTCCCAACGAATACATCTTCTATATGGATGTCCCTGGCCTCTCCAAATCTGACATTCAGGTAATCTTCTACTTCCTTACTCTCACTTACACATTTCTTTTAATTGAAACCCGCGATTCATTTGGTTTTAGGGTAGCTGAACTAGAGATGGTATGTATTACTGCCCTGAATGCTCTGAATTTTTCATGATGTGATTCTGGAAGTAGACACTGCAACGGAATGTTTGAAGTGAGATTGATTGAGATGGTTAATTACAGAATAGTTGAATTGTTTATCTGAATCTGAACTGGGACATAAGCGAGAGTCTGTTTCAAATTTATGTTTGCCTGTGTTGAGGATCACACATTCAAAAAATTGAGGTTTATAAGATAGGTGGGCTACTTCTCTTAATGGTAATTGGTTTTTAGATGAAATTATTTAATATGGTATTTGAGATCATGAAGAATTTGAGGATTCTACATTACAAAAATCAAGGAACTCCCAATGTTTGTAATATAGAAGGGTTATCCCTCTAAACGAAACATCCCACATTCAGGATTTAGTAATTGATTATCAGTGTATAGATTTATAAAATATGTGTTGGGGAGCAAGTGATATGAGGTTTTATAAGAACATGTTTCAAAAGAGAACAAATACACTCTCACTAATTTTAATTAGTTGAGATCAGCTTTTGAATGTATATACTATATATTAAACTAGGAGGATCTGTTCATGTGTATTCATATGTCTTTTGTTATACCATCATGTTAAGAAGTTTATGATAAATTCACTTAGTTAGTGTGGATGGAATCCACATTTTTCTTAAGTAATGATCATGAAGTGGTAGTGGGTGATAATGAACAAGAATATAATGAGAGAGGACTACCACATTTCTTGACTCTATTTTTTGAATCACTGCAAGGGTCTTTTTTCAATGGAGATATATAAATTGTTCTTATAATATACCTTACCTTGGATGTTTCCCTTCTCTCCGTGATAATGTTGAGATGTGAATGATAGTGAATGAGAGGAATACCTTATAGTTGAAGTAGGTTATTTTCCCTTCACTTGGCTATGTGAATACTGGTGATGAAGAAATGGTTTTGATTACAGGTGACGGTGGAAGAGGAAAATACACTAGTGATTAGGAGTGGAGGAAAGAGGAAGAGGGAGGATGGTGAGGAAGAAGGGTGCAAATATCTGAGGCTTGAGAGGAAGGCACCGCAGAAGACGATGAGGAAGTTCAGACTGCCAGAAAATGCTGATGCGTCAGCCATTTCTGCCAAGTGTGAGAGTGGAGTGTTGATGGTGGTTGTGGGAAAGCTACCTCCACCACCAAAGCCCAAAACGGTGCAGGTCAGCATCGCCTGA

mRNA sequence

ATGAGCAGGGCCGCCGATTCGAATTCATCCAACGGACATTTGGTTCAAGCCGTGAGTACCCTCTTCCCTTTCCCTGAAACTCTTGAGAAATTTGTGTTCAATTCTGGTGCTCCCGATGCTCGTGATTCTAAACCCATCTCCACCATTCCAACTGATATCTTGGACACTCCCAACGAATACATCTTCTATATGGATGTCCCTGGCCTCTCCAAATCTGACATTCAGGTGACGGTGGAAGAGGAAAATACACTAGTGATTAGGAGTGGAGGAAAGAGGAAGAGGGAGGATGGTGAGGAAGAAGGGTGCAAATATCTGAGGCTTGAGAGGAAGGCACCGCAGAAGACGATGAGGAAGTTCAGACTGCCAGAAAATGCTGATGCGTCAGCCATTTCTGCCAAGTGTGAGAGTGGAGTGTTGATGGTGGTTGTGGGAAAGCTACCTCCACCACCAAAGCCCAAAACGGTGCAGGTCAGCATCGCCTGA

Coding sequence (CDS)

ATGAGCAGGGCCGCCGATTCGAATTCATCCAACGGACATTTGGTTCAAGCCGTGAGTACCCTCTTCCCTTTCCCTGAAACTCTTGAGAAATTTGTGTTCAATTCTGGTGCTCCCGATGCTCGTGATTCTAAACCCATCTCCACCATTCCAACTGATATCTTGGACACTCCCAACGAATACATCTTCTATATGGATGTCCCTGGCCTCTCCAAATCTGACATTCAGGTGACGGTGGAAGAGGAAAATACACTAGTGATTAGGAGTGGAGGAAAGAGGAAGAGGGAGGATGGTGAGGAAGAAGGGTGCAAATATCTGAGGCTTGAGAGGAAGGCACCGCAGAAGACGATGAGGAAGTTCAGACTGCCAGAAAATGCTGATGCGTCAGCCATTTCTGCCAAGTGTGAGAGTGGAGTGTTGATGGTGGTTGTGGGAAAGCTACCTCCACCACCAAAGCCCAAAACGGTGCAGGTCAGCATCGCCTGA

Protein sequence

MSRAADSNSSNGHLVQAVSTLFPFPETLEKFVFNSGAPDARDSKPISTIPTDILDTPNEYIFYMDVPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKTMRKFRLPENADASAISAKCESGVLMVVVGKLPPPPKPKTVQVSIA

Homology

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BLAST of HG10002421 vs. NCBI nr
Match: XP_038880524.1 (17.4 kDa class III heat shock protein [Benincasa hispida])

HSP 1 Score: 291.6 bits (745), Expect = 4.2e-75
Identity = 148/160 (92.50%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 1   MSRAADSNSSNGHLVQAVSTLFPFPETLEKFVFNSGAPDARDSKPISTIPTDILDTPNEY 60
           MSR ADSNSSNGHLVQAVSTLFPFPETLEKFVF+SGA DARD K ISTIPTDILDTP EY
Sbjct: 1   MSRVADSNSSNGHLVQAVSTLFPFPETLEKFVFSSGAHDARDPKSISTIPTDILDTPTEY 60

Query: 61  IFYMDVPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKTMRKFR 120
           IFYMD+PGLSKSD+QVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKTMRKFR
Sbjct: 61  IFYMDLPGLSKSDVQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKTMRKFR 120

Query: 121 LPENADASAISAKCESGVLMVVVGKLPPPPKPKTVQVSIA 161
           LPE+AD+SAISAKCESGVLMVVV KLPPPPKPKTVQV+IA
Sbjct: 121 LPEDADSSAISAKCESGVLMVVVRKLPPPPKPKTVQVTIA 160

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BLAST of HG10002421 vs. NCBI nr
Match: ADU55780.1 (HSP19 [Citrullus lanatus])

HSP 1 Score: 288.1 bits (736), Expect = 4.6e-74
Identity = 146/153 (95.42%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 1   MSRAADSNSSNGHLVQAVSTLFPFPETLEKFVFNSGAPDARDSKPISTIPTDILDTPNEY 60
           MSRAADSNSSNGHLVQAVSTLFPFPETLEKFVFNSGA DARD K ISTIPTDILDTP+EY
Sbjct: 1   MSRAADSNSSNGHLVQAVSTLFPFPETLEKFVFNSGAHDARDPKAISTIPTDILDTPSEY 60

Query: 61  IFYMDVPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKTMRKFR 120
           IFYMD+PGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQK MRKFR
Sbjct: 61  IFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKAMRKFR 120

Query: 121 LPENADASAISAKCESGVLMVVVGKLPPPPKPK 154
           LPENAD SAISAKCESGVLMVVVGKLPPPPKPK
Sbjct: 121 LPENADVSAISAKCESGVLMVVVGKLPPPPKPK 153

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BLAST of HG10002421 vs. NCBI nr
Match: XP_023527030.1 (17.4 kDa class III heat shock protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 269.2 bits (687), Expect = 2.2e-68
Identity = 136/160 (85.00%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 1   MSRAADSNSSNGHLVQAVSTLFPFPETLEKFVFNSGAPDARDSKPISTIPTDILDTPNEY 60
           MSRAADSNSSNGHLVQA+STLFPFPE LEK  F S   DAR+ K +S+IPTDILD P EY
Sbjct: 1   MSRAADSNSSNGHLVQAISTLFPFPEALEKLAFISN--DAREPKGMSSIPTDILDAPKEY 60

Query: 61  IFYMDVPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKTMRKFR 120
           +FYMD+PGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQK +RKFR
Sbjct: 61  VFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKMVRKFR 120

Query: 121 LPENADASAISAKCESGVLMVVVGKLPPPPKPKTVQVSIA 161
           LPENAD SA+SAKCESGVL+VVVGKLPPPPKPKTVQV++A
Sbjct: 121 LPENADTSAVSAKCESGVLVVVVGKLPPPPKPKTVQVAVA 158

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BLAST of HG10002421 vs. NCBI nr
Match: KAG6581781.1 (17.4 kDa class III heat shock protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 268.5 bits (685), Expect = 3.8e-68
Identity = 136/160 (85.00%), Postives = 147/160 (91.88%), Query Frame = 0


Query: 1   MSRAADSNSSNGHLVQAVSTLFPFPETLEKFVFNSGAPDARDSKPISTIPTDILDTPNEY 60
           MSRAADSNSSNGHLVQA+STLFPFPE LEK  F S   DAR+ K +S+IPTDILD P EY
Sbjct: 1   MSRAADSNSSNGHLVQAISTLFPFPEALEKLAFIS--DDAREPKGMSSIPTDILDAPKEY 60

Query: 61  IFYMDVPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKTMRKFR 120
           +FYMD+PGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQK +RKFR
Sbjct: 61  VFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKMVRKFR 120

Query: 121 LPENADASAISAKCESGVLMVVVGKLPPPPKPKTVQVSIA 161
           LPENAD SA+SAKCESGVL+VVVGKLPPPPKPKTVQV++A
Sbjct: 121 LPENADTSAVSAKCESGVLVVVVGKLPPPPKPKTVQVAVA 158

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BLAST of HG10002421 vs. NCBI nr
Match: XP_022980741.1 (17.4 kDa class III heat shock protein [Cucurbita maxima])

HSP 1 Score: 266.5 bits (680), Expect = 1.4e-67
Identity = 135/160 (84.38%), Postives = 146/160 (91.25%), Query Frame = 0


Query: 1   MSRAADSNSSNGHLVQAVSTLFPFPETLEKFVFNSGAPDARDSKPISTIPTDILDTPNEY 60
           MSRAADSNSSNGHLVQA+STLFPFPE LEK  F S   DAR+ K ++ IPTDILD P EY
Sbjct: 1   MSRAADSNSSNGHLVQAISTLFPFPEALEKLAFVS--DDAREPKGMACIPTDILDAPKEY 60

Query: 61  IFYMDVPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKTMRKFR 120
           +FYMD+PGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQK +RKFR
Sbjct: 61  VFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKMVRKFR 120

Query: 121 LPENADASAISAKCESGVLMVVVGKLPPPPKPKTVQVSIA 161
           LPENAD SA+SAKCESGVL+VVVGKLPPPPKPKTVQV++A
Sbjct: 121 LPENADTSAVSAKCESGVLVVVVGKLPPPPKPKTVQVAVA 158

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BLAST of HG10002421 vs. ExPASy Swiss-Prot
Match: Q9SYG1 (17.4 kDa class III heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4B PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.2e-38
Identity = 84/151 (55.63%), Postives = 113/151 (74.83%), Query Frame = 0


Query: 17  AVSTLFPFPETLEKFVF---NSGAP--DARDSKPISTIPTDILDTPNEYIFYMDVPGLSK 76
           A++  F  PE +EK +     SG    ++R     + IP DIL++P EYIFY+D+PG+SK
Sbjct: 5   AINHFFGLPEAIEKLILPISRSGESNNESRGRGSSNNIPIDILESPKEYIFYLDIPGISK 64

Query: 77  SDIQVTVEEENTLVIRSGGKRKREDGE-EEGCKYLRLERKAPQKTMRKFRLPENADASAI 136
           SDIQVTVEEE TLVI+S GKRKR+D E EEG KY+RLER+  Q  ++KFRLPE+AD +++
Sbjct: 65  SDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLERRLAQNLVKKFRLPEDADMASV 124

Query: 137 SAKCESGVLMVVVGKLPP-PPKPKTVQVSIA 161
           +AK + GVL VV+ KLPP PPKPKTVQ++++
Sbjct: 125 TAKYQEGVLTVVIKKLPPQPPKPKTVQIAVS 155

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BLAST of HG10002421 vs. ExPASy Swiss-Prot
Match: Q6K7E9 (18.6 kDa class III heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP18.6 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.8e-29
Identity = 84/166 (50.60%), Postives = 105/166 (63.25%), Query Frame = 0


Query: 17  AVSTLFPFPETLEKFVFNSG-----------APDARDSKPISTI----PTDILDTPNEYI 76
           AV++L   PE L++    +G           A        IS I    P DI++TP EY 
Sbjct: 8   AVTSLLHLPEVLDRLGAAAGDRRSAGDHAHHAAHGHGQHRISGIGGGAPVDIMETPGEYA 67

Query: 77  FYMDVPGLSKSDIQVTVEEENTLVIRS-----GGKRKREDGEEEGCKYLRLERKA-PQKT 136
           F +DVPGLSKSDIQVT+EE+  LV++S      GKRKRE+ EE  CKY+RLER+A P+  
Sbjct: 68  FVLDVPGLSKSDIQVTLEEDRVLVMKSSNGAGNGKRKREE-EEGECKYIRLERRASPRAF 127

Query: 137 MRKFRLPENADASAISAKCESGVLMVVVGKLPPP-PKPKTVQVSIA 161
            RKFRLPE+AD   ISA+CE+GVL V V K PPP  K K+VQV+IA
Sbjct: 128 ARKFRLPEDADTGGISARCENGVLTVTVKKRPPPEKKTKSVQVTIA 172

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BLAST of HG10002421 vs. ExPASy Swiss-Prot
Match: O82013 (17.3 kDa class II heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.7e-26
Identity = 65/122 (53.28%), Postives = 88/122 (72.13%), Query Frame = 0


Query: 41  RDSKPISTIPTDILDTPNEYIFYMDVPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEE 100
           RD+K ++  P D+ + PN Y+F +D+PGL   DI+V VEE+N L+I   G+RKRE+ E+E
Sbjct: 38  RDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLI--SGERKREE-EKE 97

Query: 101 GCKYLRLERKAPQKTMRKFRLPENADASAISAKCESGVLMVVVGKLPP--PPKPKTVQVS 160
           G K++R+ER+   K MRKF LPENA+  AISA C+ GVL V V KLPP  P KPKT++V 
Sbjct: 98  GAKFIRMERRV-GKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVK 155

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BLAST of HG10002421 vs. ExPASy Swiss-Prot
Match: O81822 (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.9e-26
Identity = 64/137 (46.72%), Postives = 90/137 (65.69%), Query Frame = 0


Query: 26  ETLEKFVFNSGAPDARDSKPISTIPTDILDTPNEYIFYMDVPGLSKSDIQVTVEEENTLV 85
           E  EK   N      RD+K ++  P D+++ P+ Y+F +D+PG+   +IQV +E EN LV
Sbjct: 23  EQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLV 82

Query: 86  IRSGGKRKREDGEEEGCKYLRLERKAPQKTMRKFRLPENADASAISAKCESGVLMVVVGK 145
           +   GKR+R++ E EG K++R+ER+   K MRKF+LP+NAD   ISA C  GVL V + K
Sbjct: 83  V--SGKRQRDNKENEGVKFVRMERRM-GKFMRKFQLPDNADLEKISAACNDGVLKVTIPK 142

Query: 146 LPP--PPKPKTVQVSIA 161
           LPP  P KPKT+QV +A
Sbjct: 143 LPPPEPKKPKTIQVQVA 156

[Close]

BLAST of HG10002421 vs. ExPASy Swiss-Prot
Match: P29830 (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 6.4e-26
Identity = 63/122 (51.64%), Postives = 85/122 (69.67%), Query Frame = 0


Query: 41  RDSKPISTIPTDILDTPNEYIFYMDVPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEE 100
           RD+K ++  P D+++ PN Y F +D+PG+   +I+V VE +N LV+   G+R+RE+ E E
Sbjct: 37  RDAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVV--SGERQRENKENE 96

Query: 101 GCKYLRLERKAPQKTMRKFRLPENADASAISAKCESGVLMVVVGKLPP--PPKPKTVQVS 160
           G KY+R+ER+   K MRKF+LPENAD   ISA C  GVL V V KLPP  P KPKT+QV 
Sbjct: 97  GVKYVRMERRM-GKFMRKFQLPENADLDKISAVCHDGVLKVTVQKLPPPEPKKPKTIQVQ 155

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BLAST of HG10002421 vs. ExPASy TrEMBL
Match: H6TB33 (HSP19 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.2e-74
Identity = 146/153 (95.42%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 1   MSRAADSNSSNGHLVQAVSTLFPFPETLEKFVFNSGAPDARDSKPISTIPTDILDTPNEY 60
           MSRAADSNSSNGHLVQAVSTLFPFPETLEKFVFNSGA DARD K ISTIPTDILDTP+EY
Sbjct: 1   MSRAADSNSSNGHLVQAVSTLFPFPETLEKFVFNSGAHDARDPKAISTIPTDILDTPSEY 60

Query: 61  IFYMDVPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKTMRKFR 120
           IFYMD+PGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQK MRKFR
Sbjct: 61  IFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKAMRKFR 120

Query: 121 LPENADASAISAKCESGVLMVVVGKLPPPPKPK 154
           LPENAD SAISAKCESGVLMVVVGKLPPPPKPK
Sbjct: 121 LPENADVSAISAKCESGVLMVVVGKLPPPPKPK 153

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BLAST of HG10002421 vs. ExPASy TrEMBL
Match: A0A6J1IUF4 (17.4 kDa class III heat shock protein OS=Cucurbita maxima OX=3661 GN=LOC111480018 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.0e-68
Identity = 135/160 (84.38%), Postives = 146/160 (91.25%), Query Frame = 0


Query: 1   MSRAADSNSSNGHLVQAVSTLFPFPETLEKFVFNSGAPDARDSKPISTIPTDILDTPNEY 60
           MSRAADSNSSNGHLVQA+STLFPFPE LEK  F S   DAR+ K ++ IPTDILD P EY
Sbjct: 1   MSRAADSNSSNGHLVQAISTLFPFPEALEKLAFVS--DDAREPKGMACIPTDILDAPKEY 60

Query: 61  IFYMDVPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKTMRKFR 120
           +FYMD+PGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQK +RKFR
Sbjct: 61  VFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKMVRKFR 120

Query: 121 LPENADASAISAKCESGVLMVVVGKLPPPPKPKTVQVSIA 161
           LPENAD SA+SAKCESGVL+VVVGKLPPPPKPKTVQV++A
Sbjct: 121 LPENADTSAVSAKCESGVLVVVVGKLPPPPKPKTVQVAVA 158

[Close]

BLAST of HG10002421 vs. ExPASy TrEMBL
Match: A0A6J1GVE0 (17.4 kDa class III heat shock protein OS=Cucurbita moschata OX=3662 GN=LOC111457774 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 9.1e-68
Identity = 135/160 (84.38%), Postives = 146/160 (91.25%), Query Frame = 0


Query: 1   MSRAADSNSSNGHLVQAVSTLFPFPETLEKFVFNSGAPDARDSKPISTIPTDILDTPNEY 60
           MSRAADSNSSNGHLVQA+STLFP PE LEK  F S   DAR+ K +S+IPTDILD P EY
Sbjct: 1   MSRAADSNSSNGHLVQAISTLFPSPEALEKLAFISN--DAREPKGMSSIPTDILDAPKEY 60

Query: 61  IFYMDVPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKTMRKFR 120
           +FYMD+PGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQK +RKFR
Sbjct: 61  VFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKMVRKFR 120

Query: 121 LPENADASAISAKCESGVLMVVVGKLPPPPKPKTVQVSIA 161
           LPENAD SA+SAKCESGVL+VVVGKLPPPPKPKTVQV++A
Sbjct: 121 LPENADTSAVSAKCESGVLVVVVGKLPPPPKPKTVQVAVA 158

[Close]

BLAST of HG10002421 vs. ExPASy TrEMBL
Match: A0A6P4AT58 (17.4 kDa class III heat shock protein OS=Ziziphus jujuba OX=326968 GN=LOC107435148 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.8e-58
Identity = 118/160 (73.75%), Postives = 138/160 (86.25%), Query Frame = 0


Query: 1   MSRAADSNSSNGHLVQAVSTLFPFPETLEKFVFNSGAPDARDSKPISTIPTDILDTPNEY 60
           MSRAADS++ NG L  AV+  F FPETLEKFVF S A +  D+K +S+IP DILD   EY
Sbjct: 1   MSRAADSSAFNGDLASAVNNFFNFPETLEKFVFPSRAHEHNDNKGVSSIPVDILDAQKEY 60

Query: 61  IFYMDVPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKTMRKFR 120
           IF+MDVPGLSKSDIQVTVE+E+TLVIRSGGKRKRE+GEEEGCKYLRLER+ P+K +RKFR
Sbjct: 61  IFFMDVPGLSKSDIQVTVEDESTLVIRSGGKRKREEGEEEGCKYLRLERRPPKKLLRKFR 120

Query: 121 LPENADASAISAKCESGVLMVVVGKLPPPPKPKTVQVSIA 161
           LPENA+ SAI+AKCE+GVL VVV KLPPPPKPKTV+V+I+
Sbjct: 121 LPENANVSAITAKCENGVLTVVVEKLPPPPKPKTVEVTIS 160

[Close]

BLAST of HG10002421 vs. ExPASy TrEMBL
Match: A0A6P5T8I9 (17.4 kDa class III heat shock protein OS=Prunus avium OX=42229 GN=LOC110764812 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.2e-55
Identity = 114/161 (70.81%), Postives = 135/161 (83.85%), Query Frame = 0


Query: 1   MSRAADSNSSNGHLVQAVSTLFPFPETLEKFVFNSGAPDA-RDSKPISTIPTDILDTPNE 60
           MSR ADS++ NG    AV+ L  FPET++KF+F S A +   ++K  ++IP DILD+P E
Sbjct: 1   MSRVADSSAFNGDFATAVNQLLNFPETIDKFMFPSRAHETNNENKGAASIPVDILDSPKE 60

Query: 61  YIFYMDVPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKTMRKF 120
           YIF++D+PGLSKSDIQVTVE+ENTLVIRS GKRKREDGEEEGCKYLRLER+APQK  RKF
Sbjct: 61  YIFFLDLPGLSKSDIQVTVEDENTLVIRSNGKRKREDGEEEGCKYLRLERRAPQKLSRKF 120

Query: 121 RLPENADASAISAKCESGVLMVVVGKLPPPPKPKTVQVSIA 161
           RLPENA+  AISAKCE+GVL VVV KLPPPPKPKTV+VSI+
Sbjct: 121 RLPENANVGAISAKCENGVLTVVVEKLPPPPKPKTVEVSIS 161

[Close]

BLAST of HG10002421 vs. TAIR 10
Match: AT1G54050.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 3.0e-39
Identity = 84/151 (55.63%), Postives = 113/151 (74.83%), Query Frame = 0


Query: 17  AVSTLFPFPETLEKFVF---NSGAP--DARDSKPISTIPTDILDTPNEYIFYMDVPGLSK 76
           A++  F  PE +EK +     SG    ++R     + IP DIL++P EYIFY+D+PG+SK
Sbjct: 5   AINHFFGLPEAIEKLILPISRSGESNNESRGRGSSNNIPIDILESPKEYIFYLDIPGISK 64

Query: 77  SDIQVTVEEENTLVIRSGGKRKREDGE-EEGCKYLRLERKAPQKTMRKFRLPENADASAI 136
           SDIQVTVEEE TLVI+S GKRKR+D E EEG KY+RLER+  Q  ++KFRLPE+AD +++
Sbjct: 65  SDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLERRLAQNLVKKFRLPEDADMASV 124

Query: 137 SAKCESGVLMVVVGKLPP-PPKPKTVQVSIA 161
           +AK + GVL VV+ KLPP PPKPKTVQ++++
Sbjct: 125 TAKYQEGVLTVVIKKLPPQPPKPKTVQIAVS 155

[Close]

BLAST of HG10002421 vs. TAIR 10
Match: AT5G12030.1 (heat shock protein 17.6A )

HSP 1 Score: 119.8 bits (299), Expect = 2.0e-27
Identity = 64/137 (46.72%), Postives = 90/137 (65.69%), Query Frame = 0


Query: 26  ETLEKFVFNSGAPDARDSKPISTIPTDILDTPNEYIFYMDVPGLSKSDIQVTVEEENTLV 85
           E  EK   N      RD+K ++  P D+++ P+ Y+F +D+PG+   +IQV +E EN LV
Sbjct: 23  EQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLV 82

Query: 86  IRSGGKRKREDGEEEGCKYLRLERKAPQKTMRKFRLPENADASAISAKCESGVLMVVVGK 145
           +   GKR+R++ E EG K++R+ER+   K MRKF+LP+NAD   ISA C  GVL V + K
Sbjct: 83  V--SGKRQRDNKENEGVKFVRMERRM-GKFMRKFQLPDNADLEKISAACNDGVLKVTIPK 142

Query: 146 LPP--PPKPKTVQVSIA 161
           LPP  P KPKT+QV +A
Sbjct: 143 LPPPEPKKPKTIQVQVA 156

[Close]

BLAST of HG10002421 vs. TAIR 10
Match: AT5G12020.1 (17.6 kDa class II heat shock protein )

HSP 1 Score: 118.6 bits (296), Expect = 4.5e-27
Identity = 63/122 (51.64%), Postives = 85/122 (69.67%), Query Frame = 0


Query: 41  RDSKPISTIPTDILDTPNEYIFYMDVPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEE 100
           RD+K ++  P D+++ PN Y F +D+PG+   +I+V VE +N LV+   G+R+RE+ E E
Sbjct: 37  RDAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVV--SGERQRENKENE 96

Query: 101 GCKYLRLERKAPQKTMRKFRLPENADASAISAKCESGVLMVVVGKLPP--PPKPKTVQVS 160
           G KY+R+ER+   K MRKF+LPENAD   ISA C  GVL V V KLPP  P KPKT+QV 
Sbjct: 97  GVKYVRMERRM-GKFMRKFQLPENADLDKISAVCHDGVLKVTVQKLPPPEPKKPKTIQVQ 155

[Close]

BLAST of HG10002421 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 81.3 bits (199), Expect = 8.0e-16
Identity = 52/125 (41.60%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 35  SGAPDARDSKPISTIPTDILDTPNEYIFYMDVPGLSKSDIQVTVEEENTLVIRSGGKRKR 94
           + A  ARD    +    D  +TP  ++F  D+PGL K +++V VE++N L I   G+R +
Sbjct: 38  ANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQI--SGERSK 97

Query: 95  EDGEEEGCKYLRLERKAPQKTMRKFRLPENADASAISAKCESGVLMVVVGKLP-PPPKPK 154
           E+ EE+  K+ R+ER A  K MR+FRLPENA    + A  E+GVL VVV K P   P+ K
Sbjct: 98  EN-EEKNDKWHRVER-ASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVK 157

Query: 155 TVQVS 159
           ++ +S
Sbjct: 158 SIDIS 158

[Close]

BLAST of HG10002421 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-13
Identity = 52/136 (38.24%), Postives = 78/136 (57.35%), Query Frame = 0


Query: 26  ETLEKFVFNSGAPD--ARDSKPISTIPTDILDTPNEYIFYMDVPGLSKSDIQVTVEEENT 85
           +  E F+  SG  +  A D    +    D  +TP  ++F  D+PGL K +++V VE+ N 
Sbjct: 25  DPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNI 84

Query: 86  LVIRSGGKRKREDGEEEGCKYLRLERKAPQKTMRKFRLPENADASAISAKCESGVLMVVV 145
           L I   G+R  E+ EE+  K+ R+ER + + T R+FRLPENA    I A  E+GVL V V
Sbjct: 85  LQI--SGERSNEN-EEKNDKWHRVERSSGKFT-RRFRLPENAKMEEIKASMENGVLSVTV 144

Query: 146 GKLP-PPPKPKTVQVS 159
            K+P   P+ K++ +S
Sbjct: 145 PKVPEKKPEVKSIDIS 156

The following BLAST results are available for this feature:

BLAST of HG10002421 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880524.1	4.2e-75	92.50	17.4 kDa class III heat shock protein [Benincasa hispida]	[more]
ADU55780.1	4.6e-74	95.42	HSP19 [Citrullus lanatus]	[more]
XP_023527030.1	2.2e-68	85.00	17.4 kDa class III heat shock protein [Cucurbita pepo subsp. pepo]	[more]
KAG6581781.1	3.8e-68	85.00	17.4 kDa class III heat shock protein, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022980741.1	1.4e-67	84.38	17.4 kDa class III heat shock protein [Cucurbita maxima]	[more]

BLAST of HG10002421 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYG1	4.2e-38	55.63	17.4 kDa class III heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4...	[more]
Q6K7E9	2.8e-29	50.60	18.6 kDa class III heat shock protein OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
O82013	1.7e-26	53.28	17.3 kDa class II heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1	[more]
O81822	2.9e-26	46.72	17.7 kDa class II heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.7 ...	[more]
P29830	6.4e-26	51.64	17.6 kDa class II heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.6 ...	[more]

BLAST of HG10002421 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
H6TB33	2.2e-74	95.42	HSP19 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A6J1IUF4	7.0e-68	84.38	17.4 kDa class III heat shock protein OS=Cucurbita maxima OX=3661 GN=LOC11148001...	[more]
A0A6J1GVE0	9.1e-68	84.38	17.4 kDa class III heat shock protein OS=Cucurbita moschata OX=3662 GN=LOC111457...	[more]
A0A6P4AT58	3.8e-58	73.75	17.4 kDa class III heat shock protein OS=Ziziphus jujuba OX=326968 GN=LOC1074351...	[more]
A0A6P5T8I9	5.2e-55	70.81	17.4 kDa class III heat shock protein OS=Prunus avium OX=42229 GN=LOC110764812 P...	[more]

BLAST of HG10002421 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54050.1	3.0e-39	55.63	HSP20-like chaperones superfamily protein	[more]
AT5G12030.1	2.0e-27	46.72	heat shock protein 17.6A	[more]
AT5G12020.1	4.5e-27	51.64	17.6 kDa class II heat shock protein	[more]
AT5G59720.1	8.0e-16	41.60	heat shock protein 18.2	[more]
AT1G53540.1	1.3e-13	38.24	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 13..159 e-value: 9.9E-31 score: 108.5
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 24..157
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 52..158 e-value: 1.2E-20 score: 73.5
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 42..160 score: 21.976212
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 16..160
None	No IPR available	PANTHER	PTHR11527:SF297	17.4 KDA CLASS III HEAT SHOCK PROTEIN	coord: 16..160
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 52..145 e-value: 9.19873E-26 score: 91.8468

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002421.1	HG10002421.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding