Homology
BLAST of HG10002339 vs. NCBI nr
Match:
XP_038903135.1 (putative pentatricopeptide repeat-containing protein At1g17630 [Benincasa hispida])
HSP 1 Score: 978.0 bits (2527), Expect = 3.4e-281
Identity = 520/703 (73.97%), Postives = 538/703 (76.53%), Query Frame = 0
Query: 1 MLYACSYQRFKSASFCFPRLSISFYSQFSSITYDDDLLNFFDHLLRKCNGIQDSKQVHSA 60
MLY CS QRFKS SFCFPRLSI+F+SQ S+ITYDDDLL+FFDHLLR+CNGIQ SKQVHSA
Sbjct: 1 MLYTCSSQRFKSVSFCFPRLSINFHSQSSAITYDDDLLDFFDHLLRQCNGIQHSKQVHSA 60
Query: 61 TVVTGAYRSAFVAARLVSIYARYGLVSDARKVFDSAPFEGLSNLLLWNSIIRANVYHGYC 120
TVVTG Y SAFV ARLVSIY RYGLVSDARKVFDSAPFE LSN+LLWNSIIRANV HGYC
Sbjct: 61 TVVTGVYSSAFVVARLVSIYGRYGLVSDARKVFDSAPFERLSNMLLWNSIIRANVNHGYC 120
Query: 121 REALQLYGKMRNYRVLGDGFTFPLVLRASSNMGSFNLCKNLHCHVVQFGLQNHLHVVNEL 180
REALQLY KMRNY V GD FTFPLVLRASSN+GSFNLCKNLHCHVVQFGLQNHLHVVNEL
Sbjct: 121 REALQLYAKMRNYGVRGDAFTFPLVLRASSNLGSFNLCKNLHCHVVQFGLQNHLHVVNEL 180
Query: 181 IGMYAKLERMDDARKVFDKMRIKSVVSWNIMVSAYAYNYDVNGASRMFHQMELEGVEPNP 240
+GMYAKLERMDDARKVFDKMRIKSVVSWN MVS YAYNYDVNG SRMFHQMELEGVEPN
Sbjct: 181 LGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGTSRMFHQMELEGVEPNH 240
Query: 241 VTWTSLLSSHARCGHLEETMVLFSKMRMKSVGATAEMLAVVLSVCADLATLNRGQMIHGY 300
VTWTSLLSSHARCG LEETMVLFSK+RMK VGATAEMLAVVLSVCADLATLN+GQMIHGY
Sbjct: 241 VTWTSLLSSHARCGLLEETMVLFSKLRMKGVGATAEMLAVVLSVCADLATLNKGQMIHGY 300
Query: 301 MVKGGFNDYLFAKNALITVYGKGGDLGDAEKLFHEMKAKNLVSWNALISAYAESGSYDKA 360
MVKGGF DYLFAKNALIT+YGKGGDL DAEKLFHEMK KNLVSWNALIS+YAESG YDKA
Sbjct: 301 MVKGGFYDYLFAKNALITLYGKGGDLVDAEKLFHEMKVKNLVSWNALISSYAESGLYDKA 360
Query: 361 FELFSQLEKMEEVYPEMKPNVITWSAVICGFASKGLGEESLEVFRKMQLANVKANSVTIA 420
FELFS+LE+M EVYPEMKPNVITWSAVICGFASKGLGEESLEVFRKMQLANVKANSVTIA
Sbjct: 361 FELFSRLEEM-EVYPEMKPNVITWSAVICGFASKGLGEESLEVFRKMQLANVKANSVTIA 420
Query: 421 SVLSICATLAALNL---------------------------------------------- 480
SVLSICATLAALNL
Sbjct: 421 SVLSICATLAALNLGREMHGHVIRARMDDNILVGNGLINMYTKCGSFKPGCMVFEKLENR 480
Query: 481 ------------------------------------------------------------ 540
Sbjct: 481 DSISWNSMIAGYGMHGLGNNALATFNQMIKSGFRPNDVTFISALTACSHAGLVAEGRWLF 540
Query: 541 ------------------------------EASNIVKGMPIEPNAYIWSALLNSCRMHKD 568
EASNIVKGMPIEPNAYIWSALLNSCRMHKD
Sbjct: 541 YQMLQNFKIEPQMEHYACMVDLLGRAGLVEEASNIVKGMPIEPNAYIWSALLNSCRMHKD 600
BLAST of HG10002339 vs. NCBI nr
Match:
XP_004146851.1 (putative pentatricopeptide repeat-containing protein At1g17630 [Cucumis sativus])
HSP 1 Score: 947.2 bits (2447), Expect = 6.5e-272
Identity = 503/703 (71.55%), Postives = 530/703 (75.39%), Query Frame = 0
Query: 1 MLYACSYQRFKSASFCFPRLSISFYSQFSSITYDDDLLNFFDHLLRKCNGIQDSKQVHSA 60
ML A SYQRFKS SFCFP LSI+F+SQFSSITYD+DL +FFDHLLR+CNGIQ SKQVHSA
Sbjct: 1 MLCASSYQRFKSVSFCFPPLSINFHSQFSSITYDEDLPDFFDHLLRQCNGIQHSKQVHSA 60
Query: 61 TVVTGAYRSAFVAARLVSIYARYGLVSDARKVFDSAPFEGLSNLLLWNSIIRANVYHGYC 120
TVVTGAY SAFV+ARLVSIY+RYGLVSDARKVF SAPFE SN LLWNSIIRANVYHGYC
Sbjct: 61 TVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECYSNFLLWNSIIRANVYHGYC 120
Query: 121 REALQLYGKMRNYRVLGDGFTFPLVLRASSNMGSFNLCKNLHCHVVQFGLQNHLHVVNEL 180
EALQLYGKMRNY VLGDGFTFPL+LRASSN+G+FN+CKNLHCHVVQFG QNHLHV NEL
Sbjct: 121 IEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLHVGNEL 180
Query: 181 IGMYAKLERMDDARKVFDKMRIKSVVSWNIMVSAYAYNYDVNGASRMFHQMELEGVEPNP 240
IGMYAKLERMDDARKVFDKMRIKSVVSWN MVS YAYNYDVNGASRMFHQMELEGVEPNP
Sbjct: 181 IGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNP 240
Query: 241 VTWTSLLSSHARCGHLEETMVLFSKMRMKSVGATAEMLAVVLSVCADLATLNRGQMIHGY 300
VTWTSLLSSHARCGHLEETMVLF KMRMK VG TAEMLAVVLSVCADLATLN GQMIHGY
Sbjct: 241 VTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQMIHGY 300
Query: 301 MVKGGFNDYLFAKNALITVYGKGGDLGDAEKLFHEMKAKNLVSWNALISAYAESGSYDKA 360
MVKGGFNDYLFAKNALIT+YGKGG +GDAEKLFHEMK KNLVSWNALIS++AESG YDKA
Sbjct: 301 MVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFHEMKVKNLVSWNALISSFAESGVYDKA 360
Query: 361 FELFSQLEKMEEVYPEMKPNVITWSAVICGFASKGLGEESLEVFRKMQLANVKANSVTIA 420
EL SQLEKM E YPEMKPNVITWSA+ICGFASKGLGEESLEVFRKMQLANVKANSVTIA
Sbjct: 361 LELLSQLEKM-EAYPEMKPNVITWSAIICGFASKGLGEESLEVFRKMQLANVKANSVTIA 420
Query: 421 SVLSICATLAALNL---------------------------------------------- 480
SVLSICA LAALNL
Sbjct: 421 SVLSICAMLAALNLGREMHGHVIRARMDDNVLVGNGLINMYTKCGSFKPGFMVFEKLENR 480
Query: 481 ------------------------------------------------------------ 540
Sbjct: 481 DSISWNSMIAGYGTHGLGKDALATFNHMIKSGYRPDGVTFIAALSACSHAGLVAEGHWLF 540
Query: 541 ------------------------------EASNIVKGMPIEPNAYIWSALLNSCRMHKD 568
EASNI+KGMP+EPNAYIWS+LLNSCRMHKD
Sbjct: 541 SQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKGMPMEPNAYIWSSLLNSCRMHKD 600
BLAST of HG10002339 vs. NCBI nr
Match:
KAA0051178.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 937.2 bits (2421), Expect = 6.7e-269
Identity = 499/703 (70.98%), Postives = 528/703 (75.11%), Query Frame = 0
Query: 1 MLYACSYQRFKSASFCFPRLSISFYSQFSSITYDDDLLNFFDHLLRKCNGIQDSKQVHSA 60
ML A SYQRFKS SFCFP LSI+F+SQFSSITYD+DL FFDHLLR+CNGIQ SKQVHSA
Sbjct: 1 MLCAYSYQRFKSVSFCFPPLSINFHSQFSSITYDEDLPEFFDHLLRQCNGIQHSKQVHSA 60
Query: 61 TVVTGAYRSAFVAARLVSIYARYGLVSDARKVFDSAPFEGLSNLLLWNSIIRANVYHGYC 120
TVVTGAY SAFV+ARLVSIY+RYGLVSDARKVF SAPFE LSN LLWNSIIRANVYHGYC
Sbjct: 61 TVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECLSNFLLWNSIIRANVYHGYC 120
Query: 121 REALQLYGKMRNYRVLGDGFTFPLVLRASSNMGSFNLCKNLHCHVVQFGLQNHLHVVNEL 180
EAL LYGKMRNY VLGDGFTFPLVLRASSN+G+ ++CKNLHCHVVQFG QNHLHV NEL
Sbjct: 121 IEALHLYGKMRNYGVLGDGFTFPLVLRASSNLGTSDVCKNLHCHVVQFGFQNHLHVGNEL 180
Query: 181 IGMYAKLERMDDARKVFDKMRIKSVVSWNIMVSAYAYNYDVNGASRMFHQMELEGVEPNP 240
IGMYAKLERMDDARKVFDKMRIKSVVSWN MVS YAYNYDVNGASRMFHQMELEGVEPNP
Sbjct: 181 IGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNP 240
Query: 241 VTWTSLLSSHARCGHLEETMVLFSKMRMKSVGATAEMLAVVLSVCADLATLNRGQMIHGY 300
VTWTSLLSSHARCGHL ETMVLF KMRMK VGATAEMLAVVLSVCADLATLN GQMIHGY
Sbjct: 241 VTWTSLLSSHARCGHLVETMVLFCKMRMKGVGATAEMLAVVLSVCADLATLNSGQMIHGY 300
Query: 301 MVKGGFNDYLFAKNALITVYGKGGDLGDAEKLFHEMKAKNLVSWNALISAYAESGSYDKA 360
MVKGGFNDYLFAKNALIT+YGKGGD+GDAEKLFHEMK KNLVSWNALIS++AESG YDKA
Sbjct: 301 MVKGGFNDYLFAKNALITLYGKGGDVGDAEKLFHEMKVKNLVSWNALISSFAESGVYDKA 360
Query: 361 FELFSQLEKMEEVYPEMKPNVITWSAVICGFASKGLGEESLEVFRKMQLANVKANSVTIA 420
EL SQLEKM E YPEMKPNVITWS++ICGF+SKGLGEESLEVFRKMQLANVKANSVTIA
Sbjct: 361 LELLSQLEKM-EAYPEMKPNVITWSSIICGFSSKGLGEESLEVFRKMQLANVKANSVTIA 420
Query: 421 SVLSICATLAALNL---------------------------------------------- 480
SVLSICA LAALNL
Sbjct: 421 SVLSICAMLAALNLGRELHGHVIRARMDNNVLVGNGLINMYTKCGSFKPGLLVFEKLENR 480
Query: 481 ------------------------------------------------------------ 540
Sbjct: 481 DSISWNSMIAGYGTHGLGKDALATVNHMIKSGYRPDGVTFIAALSACSHAGLVAEGHWLF 540
Query: 541 ------------------------------EASNIVKGMPIEPNAYIWSALLNSCRMHKD 568
EASNI+K MP+EPNAYIWS+LLNSCRMHKD
Sbjct: 541 SQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKSMPMEPNAYIWSSLLNSCRMHKD 600
BLAST of HG10002339 vs. NCBI nr
Match:
XP_008447611.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g17630 [Cucumis melo] >TYK03723.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 932.9 bits (2410), Expect = 1.3e-267
Identity = 499/703 (70.98%), Postives = 528/703 (75.11%), Query Frame = 0
Query: 1 MLYACSYQRFKSASFCFPRLSISFYSQFSSITYDDDLLNFFDHLLRKCNGIQDSKQVHSA 60
ML A SYQRFKS SFCFP LSI+F+SQFSSITYD+DL FFDHLLR+CNGIQ SKQVHSA
Sbjct: 1 MLCAYSYQRFKSVSFCFPPLSINFHSQFSSITYDEDLPEFFDHLLRQCNGIQHSKQVHSA 60
Query: 61 TVVTGAYRSAFVAARLVSIYARYGLVSDARKVFDSAPFEGLSNLLLWNSIIRANVYHGYC 120
TVVTGAY SAFV+ARLVSIY+RYGLVSDARKVF SAPFE LSN LLWNSIIRANVYHGYC
Sbjct: 61 TVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECLSNFLLWNSIIRANVYHGYC 120
Query: 121 REALQLYGKMRNYRVLGDGFTFPLVLRASSNMGSFNLCKNLHCHVVQFGLQNHLHVVNEL 180
EAL LYGKMRNY VLGDGFTFPLVLRASSN+G+ ++CKNLHCHVVQFG QNHLHV NEL
Sbjct: 121 IEALHLYGKMRNYGVLGDGFTFPLVLRASSNLGTSDVCKNLHCHVVQFGFQNHLHVGNEL 180
Query: 181 IGMYAKLERMDDARKVFDKMRIKSVVSWNIMVSAYAYNYDVNGASRMFHQMELEGVEPNP 240
IGMYAKLERMDDARKVFDKMRIKSVVSWN MVS YAYNYDVNGASRMFHQMELEGVEPNP
Sbjct: 181 IGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNP 240
Query: 241 VTWTSLLSSHARCGHLEETMVLFSKMRMKSVGATAEMLAVVLSVCADLATLNRGQMIHGY 300
VTWTSLLSSHARCGHL ETMVLF KMRMK VGATAEMLAVVLSVCADLATLN GQMIHGY
Sbjct: 241 VTWTSLLSSHARCGHLVETMVLFCKMRMKGVGATAEMLAVVLSVCADLATLNSGQMIHGY 300
Query: 301 MVKGGFNDYLFAKNALITVYGKGGDLGDAEKLFHEMKAKNLVSWNALISAYAESGSYDKA 360
MVKGGFNDYLFAKNALIT+YGKGGD+GDAEKLFHEMK KNLVSWNALIS++AESG YDKA
Sbjct: 301 MVKGGFNDYLFAKNALITLYGKGGDVGDAEKLFHEMKVKNLVSWNALISSFAESGVYDKA 360
Query: 361 FELFSQLEKMEEVYPEMKPNVITWSAVICGFASKGLGEESLEVFRKMQLANVKANSVTIA 420
EL SQLEKM E YPEMKPNVITWS++ICGF+SKGLGEESLEVFRKMQLANVKANSVTIA
Sbjct: 361 LELLSQLEKM-EAYPEMKPNVITWSSIICGFSSKGLGEESLEVFRKMQLANVKANSVTIA 420
Query: 421 SVLSICATLAALNL---------------------------------------------- 480
SVLSICA LAALNL
Sbjct: 421 SVLSICAMLAALNLGRELHGHVIRARMDNNVLVGNGLINMYTKCGSFKPGLLVFEKLENR 480
Query: 481 ------------------------------------------------------------ 540
Sbjct: 481 DSISWNSMIAAYGTHGLGKDALATVNHMIKSGYRPDGVTFIAALSACSHAGLVAEGHWLF 540
Query: 541 ------------------------------EASNIVKGMPIEPNAYIWSALLNSCRMHKD 568
EASNI+K MP+EPNAYIWS+LLNSCRMHKD
Sbjct: 541 SQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKSMPMEPNAYIWSSLLNSCRMHKD 600
BLAST of HG10002339 vs. NCBI nr
Match:
XP_023523771.1 (putative pentatricopeptide repeat-containing protein At1g17630 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 900.2 bits (2325), Expect = 9.1e-258
Identity = 485/711 (68.21%), Postives = 520/711 (73.14%), Query Frame = 0
Query: 1 MLYACSYQRFKSASFCFPRLSISFYSQ--------FSSITYDDDLLNFFDHLLRKCNGIQ 60
MLYA SYQRF SASFCFPR +I+F S FSSITYDD+LL+ FD LLR+CNGI+
Sbjct: 1 MLYASSYQRFNSASFCFPRFTINFPSHFRYYFNSLFSSITYDDELLDSFDRLLRQCNGIR 60
Query: 61 DSKQVHSATVVTGAYRSAFVAARLVSIYARYGLVSDARKVFDSAPFEGLSNLLLWNSIIR 120
KQVHSATVVTGA SAFVAARLVS+YAR G V DARKVFD+ PFEGLSNLLLWNSIIR
Sbjct: 61 HCKQVHSATVVTGACSSAFVAARLVSVYARSGFVFDARKVFDTVPFEGLSNLLLWNSIIR 120
Query: 121 ANVYHGYCREALQLYGKMRNYRVLGDGFTFPLVLRASSNMGSFNLCKNLHCHVVQFGLQN 180
ANV GY REALQLYGKMRN+ VL DGFTFPLVLRASSN+G FNLCK+LHCHVVQFG QN
Sbjct: 121 ANV-DGYSREALQLYGKMRNFGVLADGFTFPLVLRASSNLGIFNLCKSLHCHVVQFGFQN 180
Query: 181 HLHVVNELIGMYAKLERMDDARKVFDKMRIKSVVSWNIMVSAYAYNYDVNGASRMFHQME 240
HLHVVNEL+GMY KL RMDDARKVFDKMR+KSV+SWN MVS YAYNYDVNGASRMF QME
Sbjct: 181 HLHVVNELMGMYVKLRRMDDARKVFDKMRVKSVISWNTMVSGYAYNYDVNGASRMFLQME 240
Query: 241 LEGVEPNPVTWTSLLSSHARCGHLEETMVLFSKMRMKSVGATAEMLAVVLSVCADLATLN 300
LEGVEPNPVTWTSLLSSHARCGHLEET+ LFSKMRMK VGATAEMLAVVLSVCADL T +
Sbjct: 241 LEGVEPNPVTWTSLLSSHARCGHLEETIALFSKMRMKGVGATAEMLAVVLSVCADLDTFD 300
Query: 301 RGQMIHGYMVKGGFNDYLFAKNALITVYGKGGDLGDAEKLFHEMKAKNLVSWNALISAYA 360
RGQM+HGY+VKGGF DYLFAKNALITVYGKGGD+ DAEKLFHEMK KNLVSWN+LIS+YA
Sbjct: 301 RGQMVHGYIVKGGFEDYLFAKNALITVYGKGGDIRDAEKLFHEMKVKNLVSWNSLISSYA 360
Query: 361 ESGSYDKAFELFSQLEKMEEVYPEMKPNVITWSAVICGFASKGLGEESLEVFRKMQLANV 420
ESG YDKAFE FS+LEKME PEMKP+VITWSAVICGFAS G GEESLEVFR+MQLANV
Sbjct: 361 ESGLYDKAFEAFSELEKMEGC-PEMKPSVITWSAVICGFASNGFGEESLEVFRQMQLANV 420
Query: 421 KANSVTIASVLSICATLAALNL-------------------------------------- 480
KANSVTI+SVLSICA LAALNL
Sbjct: 421 KANSVTISSVLSICAMLAALNLGREMHGHVIRARMEDNILVGNGLINMYTKCGSFKPGCL 480
Query: 481 ------------------------------------------------------------ 540
Sbjct: 481 VFGKLENRDLISWNSLIAGYGMHGLGKDALVTFDEMIKSGFRPDDVTFIAALSACSHAGL 540
Query: 541 --------------------------------------EASNIVKGMPIEPNAYIWSALL 568
EASNIVK MPI+PNAYIWSALL
Sbjct: 541 VAEGRWLFDQMLQNFKIKPQMEHYACMVDLLGRAGLVEEASNIVKSMPIKPNAYIWSALL 600
BLAST of HG10002339 vs. ExPASy Swiss-Prot
Match:
Q9LNP2 (Putative pentatricopeptide repeat-containing protein At1g17630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E72 PE=3 SV=1)
HSP 1 Score: 448.4 bits (1152), Expect = 1.2e-124
Identity = 260/670 (38.81%), Postives = 358/670 (53.43%), Query Frame = 0
Query: 20 LSISFYSQFSSITYDDDLLNFFDHLLRKCNGIQDSKQVHSATVVTG-AYRSAFVAARLVS 79
+S+S Y +S D L ++FDHLL C Q +QVH+ +++ +RS +AA L+S
Sbjct: 39 VSVSSYYSLTS-NNDQSLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLIS 98
Query: 80 IYARYGLVSDARKVFDSAPFEGLSNLLLWNSIIRANVYHGYCREALQLYGKMRNYRVLGD 139
+YAR GL+ DAR VF++ LS+L LWNSI++ANV HG AL+LY MR + GD
Sbjct: 99 VYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGD 158
Query: 140 GFTFPLVLRASSNMGSFNLCKNLHCHVVQFGLQNHLHVVNELIGMYAKLERMDDARKVFD 199
G+ PL+LRA +G F LC+ H V+Q GL+ +LHVVNEL+ +Y K RM DA +F
Sbjct: 159 GYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFV 218
Query: 200 KMRIKSVVSWNIMVSAYAYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEE 259
+M +++ +SWN+M+ ++ YD A ++F M+ E +P+ VTWTS+LS H++CG E+
Sbjct: 219 EMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFED 278
Query: 260 TMVLFSKMRMKSVGATAEMLAVVLSVCADLATLNRGQMIHGYMVKGGFNDYLFAKNALIT 319
+ F MRM + E LAV SVCA+L L+ + +HGY++KGGF +YL ++NALI
Sbjct: 279 VLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIH 338
Query: 320 VYGKGGDLGDAEKLFHEMKAKNLVSWNALISAYAESGSYDKAFELFSQLEKMEEVYPEMK 379
VYGK G + DAE LF +++ K + SWN+LI+++ ++G D+A LFS+LE+M V +K
Sbjct: 339 VYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVC-NVK 398
Query: 380 PNVITWSAVICGFASKGLGEESLEVFRKMQLANVKANSVTIASVLSICATLAALNL---- 439
NV+TW++VI G +G G++SLE FR+MQ + V ANSVTI +LSICA L ALNL
Sbjct: 399 ANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREI 458
Query: 440 ------------------------------------------------------------ 499
Sbjct: 459 HGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFA 518
Query: 500 ------------------------------------------------------------ 553
Sbjct: 519 EKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYAC 578
BLAST of HG10002339 vs. ExPASy Swiss-Prot
Match:
Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)
HSP 1 Score: 253.4 bits (646), Expect = 5.9e-66
Identity = 156/499 (31.26%), Postives = 270/499 (54.11%), Query Frame = 0
Query: 39 NFFDHLLRKCNGIQDSKQVHSATVVTGAYRSAFVAARLVSIYARYGLVSDARKVFDSAPF 98
N+F L++ + K+++++ ++ G +S+F+ ++V + + A ++F+
Sbjct: 11 NYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQV-- 70
Query: 99 EGLSNLLLWNSIIRANVYHGYCREALQLYGK-MRNYRVLGDGFTFPLVLRASSNMGSFNL 158
N+ L+NSIIRA ++ + +++Y + +R L D FTFP + ++ +++GS L
Sbjct: 71 -SNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 130
Query: 159 CKNLHCHVVQFGLQNHLHVVNELIGMYAKLERMDDARKVFDKMRIKSVVSWNIMVSAYAY 218
K +H H+ +FG + H+ N LI MY K + + DA KVFD+M + V+SWN ++S YA
Sbjct: 131 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 190
Query: 219 NYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFSKMRMKSVGATAEM 278
+ A +FH M ++ V+WT+++S + G E M F +M++ +
Sbjct: 191 LGQMKKAKGLFHLM----LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEIS 250
Query: 279 LAVVLSVCADLATLNRGQMIHGYMVKGGFNDYLFAKNALITVYGKGGDLGDAEKLFHEMK 338
L VL CA L +L G+ IH Y + GF NALI +Y K G + A +LF +M+
Sbjct: 251 LISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME 310
Query: 339 AKNLVSWNALISAYAESGSYDKAFELFSQLEKMEEVYPEMKPNVITWSAVICGFASKGLG 398
K+++SW+ +IS YA G+ A E F+++++ ++KPN IT+ ++ + G+
Sbjct: 311 GKDVISWSTMISGYAYHGNAHGAIETFNEMQR-----AKVKPNGITFLGLLSACSHVGMW 370
Query: 399 EESLEVFRKM-QLANVKANSVTIASVLSICATLAALNLEASNIVKGMPIEPNAYIWSALL 458
+E L F M Q ++ ++ + A L A I K MP++P++ IW +LL
Sbjct: 371 QEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLE-RAVEITKTMPMKPDSKIWGSLL 430
Query: 459 NSCRMHKDTDLAEETASQIFNLNSEITGSHMLLSNIFAASCRWEDSARVRISARMKGLKK 518
+SCR + D+A + L E G+++LL+NI+A +WED +R+R R + +KK
Sbjct: 431 SSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKK 490
Query: 519 VPGCSWIEVKKKVYMFKAG 536
PG S IEV V F +G
Sbjct: 491 TPGGSLIEVNNIVQEFVSG 496
BLAST of HG10002339 vs. ExPASy Swiss-Prot
Match:
Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)
HSP 1 Score: 248.8 bits (634), Expect = 1.4e-64
Identity = 143/477 (29.98%), Postives = 250/477 (52.41%), Query Frame = 0
Query: 86 VSDARKVFDSAPFEGLSNLLLWNSIIRANVYHGYCREALQLYGKMRNYRVLGDGFTFPLV 145
+ R+VF+ P +++ +N+II G +AL++ +M + D FT V
Sbjct: 192 IDSVRRVFEVMP---RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSV 251
Query: 146 LRASSNMGSFNLCKNLHCHVVQFGLQNHLHVVNELIGMYAKLERMDDARKVFDKMRIKSV 205
L S K +H +V++ G+ + +++ + L+ MYAK R++D+ +VF ++ +
Sbjct: 252 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 311
Query: 206 VSWNIMVSAYAYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFSK 265
+SWN +V+ Y N N A R+F QM V+P V ++S
Sbjct: 312 ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSS-------------------- 371
Query: 266 MRMKSVGATAEMLAVVLSVCADLATLNRGQMIHGYMVKGGFNDYLFAKNALITVYGKGGD 325
V+ CA LATL+ G+ +HGY+++GGF +F +AL+ +Y K G+
Sbjct: 372 ---------------VIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGN 431
Query: 326 LGDAEKLFHEMKAKNLVSWNALISAYAESGSYDKAFELFSQLEKMEEVYPEMKPNVITWS 385
+ A K+F M + VSW A+I +A G +A LF ++++ +KPN + +
Sbjct: 432 IKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ-----GVKPNQVAFV 491
Query: 386 AVICGFASKGLGEESLEVFRKM-QLANVKANSVTIASVLSICATLAALNLEASNIVKGMP 445
AV+ + GL +E+ F M ++ + A+V + L EA N + M
Sbjct: 492 AVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE-EAYNFISKMC 551
Query: 446 IEPNAYIWSALLNSCRMHKDTDLAEETASQIFNLNSEITGSHMLLSNIFAASCRWEDSAR 505
+EP +WS LL+SC +HK+ +LAE+ A +IF ++SE G+++L+ N++A++ RW++ A+
Sbjct: 552 VEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAK 611
Query: 506 VRISARMKGLKKVPGCSWIEVKKKVYMFKAGHSIPEGLEKVDEVLHDLALQIENHDF 562
+R+ R KGL+K P CSWIE+K K + F +G ++K++E L + Q+E +
Sbjct: 612 LRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGY 624
BLAST of HG10002339 vs. ExPASy Swiss-Prot
Match:
Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)
HSP 1 Score: 246.9 bits (629), Expect = 5.5e-64
Identity = 154/512 (30.08%), Postives = 263/512 (51.37%), Query Frame = 0
Query: 49 NGIQDSKQVHSATVVTGAYRSAFVAARLVSIYARYGLVSDARKVFDSAPFEGLSNLLLWN 108
+ + D+ +VH + G+ + F+A +L+ +Y+ G V ARKVFD + +WN
Sbjct: 91 SSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT---RKRTIYVWN 150
Query: 109 SIIRANVYHGYCREALQLYGKMRNYRVLGDGFTFPLVLRA----SSNMGSFNLCKNLHCH 168
++ RA G+ E L LY KM V D FT+ VL+A + K +H H
Sbjct: 151 ALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAH 210
Query: 169 VVQFGLQNHLHVVNELIGMYAKLERMDDARKVFDKMRIKSVVSWNIMVSAYAYNYDVNGA 228
+ + G +H++++ L+ MYA+ +D A VF M +++VVSW+ M++ YA N A
Sbjct: 211 LTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEA 270
Query: 229 SRMFHQM--ELEGVEPNPVTWTSLLSSHARCGHLEETMVLFSKMRMKSVGATAEMLAVVL 288
R F +M E + PN VT S VL
Sbjct: 271 LRTFREMMRETKDSSPNSVTMVS-----------------------------------VL 330
Query: 289 SVCADLATLNRGQMIHGYMVKGGFNDYLFAKNALITVYGKGGDLGDAEKLFHEMKAKNLV 348
CA LA L +G++IHGY+++ G + L +AL+T+YG+ G L +++F M +++V
Sbjct: 331 QACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVV 390
Query: 349 SWNALISAYAESGSYDKAFELFSQLEKMEEVYPEMKPNVITWSAVICGFASKGLGEESLE 408
SWN+LIS+Y G KA ++F ++ + P +T+ +V+ + +GL EE
Sbjct: 391 SWNSLISSYGVHGYGKKAIQIFEEM-----LANGASPTPVTFVSVLGACSHEGLVEEGKR 450
Query: 409 VFRKM-QLANVKANSVTIASVLSICATLAALNLEASNIVKGMPIEPNAYIWSALLNSCRM 468
+F M + +K A ++ + L+ EA+ +V+ M EP +W +LL SCR+
Sbjct: 451 LFETMWRDHGIKPQIEHYACMVDLLGRANRLD-EAAKMVQDMRTEPGPKVWGSLLGSCRI 510
Query: 469 HKDTDLAEETASQIFNLNSEITGSHMLLSNIFAASCRWEDSARVRISARMKGLKKVPGCS 528
H + +LAE + ++F L + G+++LL++I+A + W++ RV+ +GL+K+PG
Sbjct: 511 HGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRC 558
Query: 529 WIEVKKKVYMFKAGHSIPEGLEKVDEVLHDLA 554
W+EV++K+Y F + +E++ L LA
Sbjct: 571 WMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLA 558
BLAST of HG10002339 vs. ExPASy Swiss-Prot
Match:
Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)
HSP 1 Score: 245.4 bits (625), Expect = 1.6e-63
Identity = 145/499 (29.06%), Postives = 252/499 (50.50%), Query Frame = 0
Query: 40 FFDHLLRKCNGIQ---DSKQVHSATVVTGAYRSAFVAAR-LVSIYARYGLVSDARKVFDS 99
F++ LL+KC + + VH A ++ +R V L+++YA+ G + +ARKVF+
Sbjct: 62 FYNTLLKKCTVFKLLIQGRIVH-AHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEK 121
Query: 100 APFEGLSNLLLWNSIIRANVYHGYCREALQLYGKMRNYRVLGDGFTFPLVLRASSNMGSF 159
P + + W ++I H +AL + +M + + FT V++A++
Sbjct: 122 MP---QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 181
Query: 160 NLCKNLHCHVVQFGLQNHLHVVNELIGMYAKLERMDDARKVFDKMRIKSVVSWNIMVSAY 219
LH V+ G +++HV + L+ +Y + MDDA+ VFD + ++ VSWN +++ +
Sbjct: 182 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 241
Query: 220 AYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFSKMRMKSVGATA 279
A A +F M +G P+ ++ SL +
Sbjct: 242 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGA-------------------------- 301
Query: 280 EMLAVVLSVCADLATLNRGQMIHGYMVKGGFNDYLFAKNALITVYGKGGDLGDAEKLFHE 339
C+ L +G+ +H YM+K G FA N L+ +Y K G + DA K+F
Sbjct: 302 ---------CSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 361
Query: 340 MKAKNLVSWNALISAYAESGSYDKAFELFSQLEKMEEVYPEMKPNVITWSAVICGFASKG 399
+ +++VSWN+L++AYA+ G +A F ++ ++ ++PN I++ +V+ + G
Sbjct: 362 LAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV-----GIRPNEISFLSVLTACSHSG 421
Query: 400 LGEESLEVFRKMQLANVKANSVTIASVLSICATLAALNLEASNIVKGMPIEPNAYIWSAL 459
L +E + M+ + + +V+ + LN A ++ MPIEP A IW AL
Sbjct: 422 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLN-RALRFIEEMPIEPTAAIWKAL 481
Query: 460 LNSCRMHKDTDLAEETASQIFNLNSEITGSHMLLSNIFAASCRWEDSARVRISARMKGLK 519
LN+CRMHK+T+L A +F L+ + G H++L NI+A+ RW D+ARVR + G+K
Sbjct: 482 LNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVK 515
Query: 520 KVPGCSWIEVKKKVYMFKA 535
K P CSW+E++ ++MF A
Sbjct: 542 KEPACSWVEIENAIHMFVA 515
BLAST of HG10002339 vs. ExPASy TrEMBL
Match:
A0A0A0LFT1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848280 PE=4 SV=1)
HSP 1 Score: 947.2 bits (2447), Expect = 3.1e-272
Identity = 503/703 (71.55%), Postives = 530/703 (75.39%), Query Frame = 0
Query: 1 MLYACSYQRFKSASFCFPRLSISFYSQFSSITYDDDLLNFFDHLLRKCNGIQDSKQVHSA 60
ML A SYQRFKS SFCFP LSI+F+SQFSSITYD+DL +FFDHLLR+CNGIQ SKQVHSA
Sbjct: 1 MLCASSYQRFKSVSFCFPPLSINFHSQFSSITYDEDLPDFFDHLLRQCNGIQHSKQVHSA 60
Query: 61 TVVTGAYRSAFVAARLVSIYARYGLVSDARKVFDSAPFEGLSNLLLWNSIIRANVYHGYC 120
TVVTGAY SAFV+ARLVSIY+RYGLVSDARKVF SAPFE SN LLWNSIIRANVYHGYC
Sbjct: 61 TVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECYSNFLLWNSIIRANVYHGYC 120
Query: 121 REALQLYGKMRNYRVLGDGFTFPLVLRASSNMGSFNLCKNLHCHVVQFGLQNHLHVVNEL 180
EALQLYGKMRNY VLGDGFTFPL+LRASSN+G+FN+CKNLHCHVVQFG QNHLHV NEL
Sbjct: 121 IEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLHVGNEL 180
Query: 181 IGMYAKLERMDDARKVFDKMRIKSVVSWNIMVSAYAYNYDVNGASRMFHQMELEGVEPNP 240
IGMYAKLERMDDARKVFDKMRIKSVVSWN MVS YAYNYDVNGASRMFHQMELEGVEPNP
Sbjct: 181 IGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNP 240
Query: 241 VTWTSLLSSHARCGHLEETMVLFSKMRMKSVGATAEMLAVVLSVCADLATLNRGQMIHGY 300
VTWTSLLSSHARCGHLEETMVLF KMRMK VG TAEMLAVVLSVCADLATLN GQMIHGY
Sbjct: 241 VTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQMIHGY 300
Query: 301 MVKGGFNDYLFAKNALITVYGKGGDLGDAEKLFHEMKAKNLVSWNALISAYAESGSYDKA 360
MVKGGFNDYLFAKNALIT+YGKGG +GDAEKLFHEMK KNLVSWNALIS++AESG YDKA
Sbjct: 301 MVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFHEMKVKNLVSWNALISSFAESGVYDKA 360
Query: 361 FELFSQLEKMEEVYPEMKPNVITWSAVICGFASKGLGEESLEVFRKMQLANVKANSVTIA 420
EL SQLEKM E YPEMKPNVITWSA+ICGFASKGLGEESLEVFRKMQLANVKANSVTIA
Sbjct: 361 LELLSQLEKM-EAYPEMKPNVITWSAIICGFASKGLGEESLEVFRKMQLANVKANSVTIA 420
Query: 421 SVLSICATLAALNL---------------------------------------------- 480
SVLSICA LAALNL
Sbjct: 421 SVLSICAMLAALNLGREMHGHVIRARMDDNVLVGNGLINMYTKCGSFKPGFMVFEKLENR 480
Query: 481 ------------------------------------------------------------ 540
Sbjct: 481 DSISWNSMIAGYGTHGLGKDALATFNHMIKSGYRPDGVTFIAALSACSHAGLVAEGHWLF 540
Query: 541 ------------------------------EASNIVKGMPIEPNAYIWSALLNSCRMHKD 568
EASNI+KGMP+EPNAYIWS+LLNSCRMHKD
Sbjct: 541 SQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKGMPMEPNAYIWSSLLNSCRMHKD 600
BLAST of HG10002339 vs. ExPASy TrEMBL
Match:
A0A5A7U7B1 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold511G001350 PE=4 SV=1)
HSP 1 Score: 937.2 bits (2421), Expect = 3.3e-269
Identity = 499/703 (70.98%), Postives = 528/703 (75.11%), Query Frame = 0
Query: 1 MLYACSYQRFKSASFCFPRLSISFYSQFSSITYDDDLLNFFDHLLRKCNGIQDSKQVHSA 60
ML A SYQRFKS SFCFP LSI+F+SQFSSITYD+DL FFDHLLR+CNGIQ SKQVHSA
Sbjct: 1 MLCAYSYQRFKSVSFCFPPLSINFHSQFSSITYDEDLPEFFDHLLRQCNGIQHSKQVHSA 60
Query: 61 TVVTGAYRSAFVAARLVSIYARYGLVSDARKVFDSAPFEGLSNLLLWNSIIRANVYHGYC 120
TVVTGAY SAFV+ARLVSIY+RYGLVSDARKVF SAPFE LSN LLWNSIIRANVYHGYC
Sbjct: 61 TVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECLSNFLLWNSIIRANVYHGYC 120
Query: 121 REALQLYGKMRNYRVLGDGFTFPLVLRASSNMGSFNLCKNLHCHVVQFGLQNHLHVVNEL 180
EAL LYGKMRNY VLGDGFTFPLVLRASSN+G+ ++CKNLHCHVVQFG QNHLHV NEL
Sbjct: 121 IEALHLYGKMRNYGVLGDGFTFPLVLRASSNLGTSDVCKNLHCHVVQFGFQNHLHVGNEL 180
Query: 181 IGMYAKLERMDDARKVFDKMRIKSVVSWNIMVSAYAYNYDVNGASRMFHQMELEGVEPNP 240
IGMYAKLERMDDARKVFDKMRIKSVVSWN MVS YAYNYDVNGASRMFHQMELEGVEPNP
Sbjct: 181 IGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNP 240
Query: 241 VTWTSLLSSHARCGHLEETMVLFSKMRMKSVGATAEMLAVVLSVCADLATLNRGQMIHGY 300
VTWTSLLSSHARCGHL ETMVLF KMRMK VGATAEMLAVVLSVCADLATLN GQMIHGY
Sbjct: 241 VTWTSLLSSHARCGHLVETMVLFCKMRMKGVGATAEMLAVVLSVCADLATLNSGQMIHGY 300
Query: 301 MVKGGFNDYLFAKNALITVYGKGGDLGDAEKLFHEMKAKNLVSWNALISAYAESGSYDKA 360
MVKGGFNDYLFAKNALIT+YGKGGD+GDAEKLFHEMK KNLVSWNALIS++AESG YDKA
Sbjct: 301 MVKGGFNDYLFAKNALITLYGKGGDVGDAEKLFHEMKVKNLVSWNALISSFAESGVYDKA 360
Query: 361 FELFSQLEKMEEVYPEMKPNVITWSAVICGFASKGLGEESLEVFRKMQLANVKANSVTIA 420
EL SQLEKM E YPEMKPNVITWS++ICGF+SKGLGEESLEVFRKMQLANVKANSVTIA
Sbjct: 361 LELLSQLEKM-EAYPEMKPNVITWSSIICGFSSKGLGEESLEVFRKMQLANVKANSVTIA 420
Query: 421 SVLSICATLAALNL---------------------------------------------- 480
SVLSICA LAALNL
Sbjct: 421 SVLSICAMLAALNLGRELHGHVIRARMDNNVLVGNGLINMYTKCGSFKPGLLVFEKLENR 480
Query: 481 ------------------------------------------------------------ 540
Sbjct: 481 DSISWNSMIAGYGTHGLGKDALATVNHMIKSGYRPDGVTFIAALSACSHAGLVAEGHWLF 540
Query: 541 ------------------------------EASNIVKGMPIEPNAYIWSALLNSCRMHKD 568
EASNI+K MP+EPNAYIWS+LLNSCRMHKD
Sbjct: 541 SQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKSMPMEPNAYIWSSLLNSCRMHKD 600
BLAST of HG10002339 vs. ExPASy TrEMBL
Match:
A0A5D3BVI7 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00940 PE=4 SV=1)
HSP 1 Score: 932.9 bits (2410), Expect = 6.1e-268
Identity = 499/703 (70.98%), Postives = 528/703 (75.11%), Query Frame = 0
Query: 1 MLYACSYQRFKSASFCFPRLSISFYSQFSSITYDDDLLNFFDHLLRKCNGIQDSKQVHSA 60
ML A SYQRFKS SFCFP LSI+F+SQFSSITYD+DL FFDHLLR+CNGIQ SKQVHSA
Sbjct: 1 MLCAYSYQRFKSVSFCFPPLSINFHSQFSSITYDEDLPEFFDHLLRQCNGIQHSKQVHSA 60
Query: 61 TVVTGAYRSAFVAARLVSIYARYGLVSDARKVFDSAPFEGLSNLLLWNSIIRANVYHGYC 120
TVVTGAY SAFV+ARLVSIY+RYGLVSDARKVF SAPFE LSN LLWNSIIRANVYHGYC
Sbjct: 61 TVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECLSNFLLWNSIIRANVYHGYC 120
Query: 121 REALQLYGKMRNYRVLGDGFTFPLVLRASSNMGSFNLCKNLHCHVVQFGLQNHLHVVNEL 180
EAL LYGKMRNY VLGDGFTFPLVLRASSN+G+ ++CKNLHCHVVQFG QNHLHV NEL
Sbjct: 121 IEALHLYGKMRNYGVLGDGFTFPLVLRASSNLGTSDVCKNLHCHVVQFGFQNHLHVGNEL 180
Query: 181 IGMYAKLERMDDARKVFDKMRIKSVVSWNIMVSAYAYNYDVNGASRMFHQMELEGVEPNP 240
IGMYAKLERMDDARKVFDKMRIKSVVSWN MVS YAYNYDVNGASRMFHQMELEGVEPNP
Sbjct: 181 IGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNP 240
Query: 241 VTWTSLLSSHARCGHLEETMVLFSKMRMKSVGATAEMLAVVLSVCADLATLNRGQMIHGY 300
VTWTSLLSSHARCGHL ETMVLF KMRMK VGATAEMLAVVLSVCADLATLN GQMIHGY
Sbjct: 241 VTWTSLLSSHARCGHLVETMVLFCKMRMKGVGATAEMLAVVLSVCADLATLNSGQMIHGY 300
Query: 301 MVKGGFNDYLFAKNALITVYGKGGDLGDAEKLFHEMKAKNLVSWNALISAYAESGSYDKA 360
MVKGGFNDYLFAKNALIT+YGKGGD+GDAEKLFHEMK KNLVSWNALIS++AESG YDKA
Sbjct: 301 MVKGGFNDYLFAKNALITLYGKGGDVGDAEKLFHEMKVKNLVSWNALISSFAESGVYDKA 360
Query: 361 FELFSQLEKMEEVYPEMKPNVITWSAVICGFASKGLGEESLEVFRKMQLANVKANSVTIA 420
EL SQLEKM E YPEMKPNVITWS++ICGF+SKGLGEESLEVFRKMQLANVKANSVTIA
Sbjct: 361 LELLSQLEKM-EAYPEMKPNVITWSSIICGFSSKGLGEESLEVFRKMQLANVKANSVTIA 420
Query: 421 SVLSICATLAALNL---------------------------------------------- 480
SVLSICA LAALNL
Sbjct: 421 SVLSICAMLAALNLGRELHGHVIRARMDNNVLVGNGLINMYTKCGSFKPGLLVFEKLENR 480
Query: 481 ------------------------------------------------------------ 540
Sbjct: 481 DSISWNSMIAAYGTHGLGKDALATVNHMIKSGYRPDGVTFIAALSACSHAGLVAEGHWLF 540
Query: 541 ------------------------------EASNIVKGMPIEPNAYIWSALLNSCRMHKD 568
EASNI+K MP+EPNAYIWS+LLNSCRMHKD
Sbjct: 541 SQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKSMPMEPNAYIWSSLLNSCRMHKD 600
BLAST of HG10002339 vs. ExPASy TrEMBL
Match:
A0A1S3BIG8 (putative pentatricopeptide repeat-containing protein At1g17630 OS=Cucumis melo OX=3656 GN=LOC103490025 PE=4 SV=1)
HSP 1 Score: 932.9 bits (2410), Expect = 6.1e-268
Identity = 499/703 (70.98%), Postives = 528/703 (75.11%), Query Frame = 0
Query: 1 MLYACSYQRFKSASFCFPRLSISFYSQFSSITYDDDLLNFFDHLLRKCNGIQDSKQVHSA 60
ML A SYQRFKS SFCFP LSI+F+SQFSSITYD+DL FFDHLLR+CNGIQ SKQVHSA
Sbjct: 1 MLCAYSYQRFKSVSFCFPPLSINFHSQFSSITYDEDLPEFFDHLLRQCNGIQHSKQVHSA 60
Query: 61 TVVTGAYRSAFVAARLVSIYARYGLVSDARKVFDSAPFEGLSNLLLWNSIIRANVYHGYC 120
TVVTGAY SAFV+ARLVSIY+RYGLVSDARKVF SAPFE LSN LLWNSIIRANVYHGYC
Sbjct: 61 TVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECLSNFLLWNSIIRANVYHGYC 120
Query: 121 REALQLYGKMRNYRVLGDGFTFPLVLRASSNMGSFNLCKNLHCHVVQFGLQNHLHVVNEL 180
EAL LYGKMRNY VLGDGFTFPLVLRASSN+G+ ++CKNLHCHVVQFG QNHLHV NEL
Sbjct: 121 IEALHLYGKMRNYGVLGDGFTFPLVLRASSNLGTSDVCKNLHCHVVQFGFQNHLHVGNEL 180
Query: 181 IGMYAKLERMDDARKVFDKMRIKSVVSWNIMVSAYAYNYDVNGASRMFHQMELEGVEPNP 240
IGMYAKLERMDDARKVFDKMRIKSVVSWN MVS YAYNYDVNGASRMFHQMELEGVEPNP
Sbjct: 181 IGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNP 240
Query: 241 VTWTSLLSSHARCGHLEETMVLFSKMRMKSVGATAEMLAVVLSVCADLATLNRGQMIHGY 300
VTWTSLLSSHARCGHL ETMVLF KMRMK VGATAEMLAVVLSVCADLATLN GQMIHGY
Sbjct: 241 VTWTSLLSSHARCGHLVETMVLFCKMRMKGVGATAEMLAVVLSVCADLATLNSGQMIHGY 300
Query: 301 MVKGGFNDYLFAKNALITVYGKGGDLGDAEKLFHEMKAKNLVSWNALISAYAESGSYDKA 360
MVKGGFNDYLFAKNALIT+YGKGGD+GDAEKLFHEMK KNLVSWNALIS++AESG YDKA
Sbjct: 301 MVKGGFNDYLFAKNALITLYGKGGDVGDAEKLFHEMKVKNLVSWNALISSFAESGVYDKA 360
Query: 361 FELFSQLEKMEEVYPEMKPNVITWSAVICGFASKGLGEESLEVFRKMQLANVKANSVTIA 420
EL SQLEKM E YPEMKPNVITWS++ICGF+SKGLGEESLEVFRKMQLANVKANSVTIA
Sbjct: 361 LELLSQLEKM-EAYPEMKPNVITWSSIICGFSSKGLGEESLEVFRKMQLANVKANSVTIA 420
Query: 421 SVLSICATLAALNL---------------------------------------------- 480
SVLSICA LAALNL
Sbjct: 421 SVLSICAMLAALNLGRELHGHVIRARMDNNVLVGNGLINMYTKCGSFKPGLLVFEKLENR 480
Query: 481 ------------------------------------------------------------ 540
Sbjct: 481 DSISWNSMIAAYGTHGLGKDALATVNHMIKSGYRPDGVTFIAALSACSHAGLVAEGHWLF 540
Query: 541 ------------------------------EASNIVKGMPIEPNAYIWSALLNSCRMHKD 568
EASNI+K MP+EPNAYIWS+LLNSCRMHKD
Sbjct: 541 SQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKSMPMEPNAYIWSSLLNSCRMHKD 600
BLAST of HG10002339 vs. ExPASy TrEMBL
Match:
A0A6J1KAZ0 (putative pentatricopeptide repeat-containing protein At1g17630 OS=Cucurbita maxima OX=3661 GN=LOC111492667 PE=4 SV=1)
HSP 1 Score: 899.0 bits (2322), Expect = 9.8e-258
Identity = 485/711 (68.21%), Postives = 515/711 (72.43%), Query Frame = 0
Query: 1 MLYACSYQRFKSASFCFPRLSIS--------FYSQFSSITYDDDLLNFFDHLLRKCNGIQ 60
MLYA SYQRF SASFCFPR +I+ F S FSSITYDD+LL+ FD LLR+CNGI+
Sbjct: 1 MLYASSYQRFNSASFCFPRFTINFPSHFRSYFNSHFSSITYDDELLDSFDRLLRQCNGIR 60
Query: 61 DSKQVHSATVVTGAYRSAFVAARLVSIYARYGLVSDARKVFDSAPFEGLSNLLLWNSIIR 120
KQVHS TVV GA SAFVAARLVS+YAR G V DARKVFD+ PFEGLSNLLLWNSIIR
Sbjct: 61 HCKQVHSTTVVIGACSSAFVAARLVSVYARSGFVFDARKVFDTVPFEGLSNLLLWNSIIR 120
Query: 121 ANVYHGYCREALQLYGKMRNYRVLGDGFTFPLVLRASSNMGSFNLCKNLHCHVVQFGLQN 180
ANV GYCREALQLYGKMRN+ VL DGFTFPLVLRASSN+G FNLCK LHCHVVQFG QN
Sbjct: 121 ANV-DGYCREALQLYGKMRNFGVLADGFTFPLVLRASSNLGIFNLCKTLHCHVVQFGFQN 180
Query: 181 HLHVVNELIGMYAKLERMDDARKVFDKMRIKSVVSWNIMVSAYAYNYDVNGASRMFHQME 240
HLHVVNELIGMY KL RM DARKVFDKMR+KSV+SWN MVS YAYNYDVNGA RMF QME
Sbjct: 181 HLHVVNELIGMYVKLRRMGDARKVFDKMRVKSVISWNTMVSGYAYNYDVNGAFRMFLQME 240
Query: 241 LEGVEPNPVTWTSLLSSHARCGHLEETMVLFSKMRMKSVGATAEMLAVVLSVCADLATLN 300
LEGVEPNPVTWTSLLSSHARCGHLEET+ LFSKMRMK VGATAEMLAVVLSVCADLATL+
Sbjct: 241 LEGVEPNPVTWTSLLSSHARCGHLEETIALFSKMRMKGVGATAEMLAVVLSVCADLATLD 300
Query: 301 RGQMIHGYMVKGGFNDYLFAKNALITVYGKGGDLGDAEKLFHEMKAKNLVSWNALISAYA 360
RGQM+HGY+VKGGF DYLFAKNALITVYGKGGD+ DAEKLFHEMK KNLVSWN+LIS+YA
Sbjct: 301 RGQMVHGYIVKGGFEDYLFAKNALITVYGKGGDIRDAEKLFHEMKVKNLVSWNSLISSYA 360
Query: 361 ESGSYDKAFELFSQLEKMEEVYPEMKPNVITWSAVICGFASKGLGEESLEVFRKMQLANV 420
ESG YDKAFE FS+LEKME PEMKPNVITWSAVICGFAS G GEESLEVFR+MQLANV
Sbjct: 361 ESGLYDKAFEAFSELEKMEGC-PEMKPNVITWSAVICGFASNGFGEESLEVFRQMQLANV 420
Query: 421 KANSVTIASVLSICATLAALNL-------------------------------------- 480
KANSVTI+SVLSICA LAALNL
Sbjct: 421 KANSVTISSVLSICAMLAALNLGREMHGHVIRARMEDNILVGNGLINMYTKCGSFKPGCL 480
Query: 481 ------------------------------------------------------------ 540
Sbjct: 481 VFEKLENRDLISWNSMIAGYGMHGLGKDALVTFDEMIKSGFRPDDVTFIAALSACSHAGL 540
Query: 541 --------------------------------------EASNIVKGMPIEPNAYIWSALL 568
EASN+VK MPI+PN YIWSALL
Sbjct: 541 VAEGRWLFDQMLQNFKIKPQMEHYACMVDLLGRAGLVEEASNMVKSMPIKPNVYIWSALL 600
BLAST of HG10002339 vs. TAIR 10
Match:
AT1G17630.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 448.4 bits (1152), Expect = 8.8e-126
Identity = 260/670 (38.81%), Postives = 358/670 (53.43%), Query Frame = 0
Query: 20 LSISFYSQFSSITYDDDLLNFFDHLLRKCNGIQDSKQVHSATVVTG-AYRSAFVAARLVS 79
+S+S Y +S D L ++FDHLL C Q +QVH+ +++ +RS +AA L+S
Sbjct: 39 VSVSSYYSLTS-NNDQSLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLIS 98
Query: 80 IYARYGLVSDARKVFDSAPFEGLSNLLLWNSIIRANVYHGYCREALQLYGKMRNYRVLGD 139
+YAR GL+ DAR VF++ LS+L LWNSI++ANV HG AL+LY MR + GD
Sbjct: 99 VYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGD 158
Query: 140 GFTFPLVLRASSNMGSFNLCKNLHCHVVQFGLQNHLHVVNELIGMYAKLERMDDARKVFD 199
G+ PL+LRA +G F LC+ H V+Q GL+ +LHVVNEL+ +Y K RM DA +F
Sbjct: 159 GYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFV 218
Query: 200 KMRIKSVVSWNIMVSAYAYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEE 259
+M +++ +SWN+M+ ++ YD A ++F M+ E +P+ VTWTS+LS H++CG E+
Sbjct: 219 EMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFED 278
Query: 260 TMVLFSKMRMKSVGATAEMLAVVLSVCADLATLNRGQMIHGYMVKGGFNDYLFAKNALIT 319
+ F MRM + E LAV SVCA+L L+ + +HGY++KGGF +YL ++NALI
Sbjct: 279 VLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIH 338
Query: 320 VYGKGGDLGDAEKLFHEMKAKNLVSWNALISAYAESGSYDKAFELFSQLEKMEEVYPEMK 379
VYGK G + DAE LF +++ K + SWN+LI+++ ++G D+A LFS+LE+M V +K
Sbjct: 339 VYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVC-NVK 398
Query: 380 PNVITWSAVICGFASKGLGEESLEVFRKMQLANVKANSVTIASVLSICATLAALNL---- 439
NV+TW++VI G +G G++SLE FR+MQ + V ANSVTI +LSICA L ALNL
Sbjct: 399 ANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREI 458
Query: 440 ------------------------------------------------------------ 499
Sbjct: 459 HGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFA 518
Query: 500 ------------------------------------------------------------ 553
Sbjct: 519 EKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYAC 578
BLAST of HG10002339 vs. TAIR 10
Match:
AT2G20540.1 (mitochondrial editing factor 21 )
HSP 1 Score: 253.4 bits (646), Expect = 4.2e-67
Identity = 156/499 (31.26%), Postives = 270/499 (54.11%), Query Frame = 0
Query: 39 NFFDHLLRKCNGIQDSKQVHSATVVTGAYRSAFVAARLVSIYARYGLVSDARKVFDSAPF 98
N+F L++ + K+++++ ++ G +S+F+ ++V + + A ++F+
Sbjct: 11 NYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQV-- 70
Query: 99 EGLSNLLLWNSIIRANVYHGYCREALQLYGK-MRNYRVLGDGFTFPLVLRASSNMGSFNL 158
N+ L+NSIIRA ++ + +++Y + +R L D FTFP + ++ +++GS L
Sbjct: 71 -SNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 130
Query: 159 CKNLHCHVVQFGLQNHLHVVNELIGMYAKLERMDDARKVFDKMRIKSVVSWNIMVSAYAY 218
K +H H+ +FG + H+ N LI MY K + + DA KVFD+M + V+SWN ++S YA
Sbjct: 131 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 190
Query: 219 NYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFSKMRMKSVGATAEM 278
+ A +FH M ++ V+WT+++S + G E M F +M++ +
Sbjct: 191 LGQMKKAKGLFHLM----LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEIS 250
Query: 279 LAVVLSVCADLATLNRGQMIHGYMVKGGFNDYLFAKNALITVYGKGGDLGDAEKLFHEMK 338
L VL CA L +L G+ IH Y + GF NALI +Y K G + A +LF +M+
Sbjct: 251 LISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME 310
Query: 339 AKNLVSWNALISAYAESGSYDKAFELFSQLEKMEEVYPEMKPNVITWSAVICGFASKGLG 398
K+++SW+ +IS YA G+ A E F+++++ ++KPN IT+ ++ + G+
Sbjct: 311 GKDVISWSTMISGYAYHGNAHGAIETFNEMQR-----AKVKPNGITFLGLLSACSHVGMW 370
Query: 399 EESLEVFRKM-QLANVKANSVTIASVLSICATLAALNLEASNIVKGMPIEPNAYIWSALL 458
+E L F M Q ++ ++ + A L A I K MP++P++ IW +LL
Sbjct: 371 QEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLE-RAVEITKTMPMKPDSKIWGSLL 430
Query: 459 NSCRMHKDTDLAEETASQIFNLNSEITGSHMLLSNIFAASCRWEDSARVRISARMKGLKK 518
+SCR + D+A + L E G+++LL+NI+A +WED +R+R R + +KK
Sbjct: 431 SSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKK 490
Query: 519 VPGCSWIEVKKKVYMFKAG 536
PG S IEV V F +G
Sbjct: 491 TPGGSLIEVNNIVQEFVSG 496
BLAST of HG10002339 vs. TAIR 10
Match:
AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 248.8 bits (634), Expect = 1.0e-65
Identity = 143/477 (29.98%), Postives = 250/477 (52.41%), Query Frame = 0
Query: 86 VSDARKVFDSAPFEGLSNLLLWNSIIRANVYHGYCREALQLYGKMRNYRVLGDGFTFPLV 145
+ R+VF+ P +++ +N+II G +AL++ +M + D FT V
Sbjct: 192 IDSVRRVFEVMP---RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSV 251
Query: 146 LRASSNMGSFNLCKNLHCHVVQFGLQNHLHVVNELIGMYAKLERMDDARKVFDKMRIKSV 205
L S K +H +V++ G+ + +++ + L+ MYAK R++D+ +VF ++ +
Sbjct: 252 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 311
Query: 206 VSWNIMVSAYAYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFSK 265
+SWN +V+ Y N N A R+F QM V+P V ++S
Sbjct: 312 ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSS-------------------- 371
Query: 266 MRMKSVGATAEMLAVVLSVCADLATLNRGQMIHGYMVKGGFNDYLFAKNALITVYGKGGD 325
V+ CA LATL+ G+ +HGY+++GGF +F +AL+ +Y K G+
Sbjct: 372 ---------------VIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGN 431
Query: 326 LGDAEKLFHEMKAKNLVSWNALISAYAESGSYDKAFELFSQLEKMEEVYPEMKPNVITWS 385
+ A K+F M + VSW A+I +A G +A LF ++++ +KPN + +
Sbjct: 432 IKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ-----GVKPNQVAFV 491
Query: 386 AVICGFASKGLGEESLEVFRKM-QLANVKANSVTIASVLSICATLAALNLEASNIVKGMP 445
AV+ + GL +E+ F M ++ + A+V + L EA N + M
Sbjct: 492 AVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE-EAYNFISKMC 551
Query: 446 IEPNAYIWSALLNSCRMHKDTDLAEETASQIFNLNSEITGSHMLLSNIFAASCRWEDSAR 505
+EP +WS LL+SC +HK+ +LAE+ A +IF ++SE G+++L+ N++A++ RW++ A+
Sbjct: 552 VEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAK 611
Query: 506 VRISARMKGLKKVPGCSWIEVKKKVYMFKAGHSIPEGLEKVDEVLHDLALQIENHDF 562
+R+ R KGL+K P CSWIE+K K + F +G ++K++E L + Q+E +
Sbjct: 612 LRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGY 624
BLAST of HG10002339 vs. TAIR 10
Match:
AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 246.9 bits (629), Expect = 3.9e-65
Identity = 154/512 (30.08%), Postives = 263/512 (51.37%), Query Frame = 0
Query: 49 NGIQDSKQVHSATVVTGAYRSAFVAARLVSIYARYGLVSDARKVFDSAPFEGLSNLLLWN 108
+ + D+ +VH + G+ + F+A +L+ +Y+ G V ARKVFD + +WN
Sbjct: 91 SSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT---RKRTIYVWN 150
Query: 109 SIIRANVYHGYCREALQLYGKMRNYRVLGDGFTFPLVLRA----SSNMGSFNLCKNLHCH 168
++ RA G+ E L LY KM V D FT+ VL+A + K +H H
Sbjct: 151 ALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAH 210
Query: 169 VVQFGLQNHLHVVNELIGMYAKLERMDDARKVFDKMRIKSVVSWNIMVSAYAYNYDVNGA 228
+ + G +H++++ L+ MYA+ +D A VF M +++VVSW+ M++ YA N A
Sbjct: 211 LTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEA 270
Query: 229 SRMFHQM--ELEGVEPNPVTWTSLLSSHARCGHLEETMVLFSKMRMKSVGATAEMLAVVL 288
R F +M E + PN VT S VL
Sbjct: 271 LRTFREMMRETKDSSPNSVTMVS-----------------------------------VL 330
Query: 289 SVCADLATLNRGQMIHGYMVKGGFNDYLFAKNALITVYGKGGDLGDAEKLFHEMKAKNLV 348
CA LA L +G++IHGY+++ G + L +AL+T+YG+ G L +++F M +++V
Sbjct: 331 QACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVV 390
Query: 349 SWNALISAYAESGSYDKAFELFSQLEKMEEVYPEMKPNVITWSAVICGFASKGLGEESLE 408
SWN+LIS+Y G KA ++F ++ + P +T+ +V+ + +GL EE
Sbjct: 391 SWNSLISSYGVHGYGKKAIQIFEEM-----LANGASPTPVTFVSVLGACSHEGLVEEGKR 450
Query: 409 VFRKM-QLANVKANSVTIASVLSICATLAALNLEASNIVKGMPIEPNAYIWSALLNSCRM 468
+F M + +K A ++ + L+ EA+ +V+ M EP +W +LL SCR+
Sbjct: 451 LFETMWRDHGIKPQIEHYACMVDLLGRANRLD-EAAKMVQDMRTEPGPKVWGSLLGSCRI 510
Query: 469 HKDTDLAEETASQIFNLNSEITGSHMLLSNIFAASCRWEDSARVRISARMKGLKKVPGCS 528
H + +LAE + ++F L + G+++LL++I+A + W++ RV+ +GL+K+PG
Sbjct: 511 HGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRC 558
Query: 529 WIEVKKKVYMFKAGHSIPEGLEKVDEVLHDLA 554
W+EV++K+Y F + +E++ L LA
Sbjct: 571 WMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLA 558
BLAST of HG10002339 vs. TAIR 10
Match:
AT3G24000.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 245.4 bits (625), Expect = 1.1e-64
Identity = 145/499 (29.06%), Postives = 252/499 (50.50%), Query Frame = 0
Query: 40 FFDHLLRKCNGIQ---DSKQVHSATVVTGAYRSAFVAAR-LVSIYARYGLVSDARKVFDS 99
F++ LL+KC + + VH A ++ +R V L+++YA+ G + +ARKVF+
Sbjct: 62 FYNTLLKKCTVFKLLIQGRIVH-AHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEK 121
Query: 100 APFEGLSNLLLWNSIIRANVYHGYCREALQLYGKMRNYRVLGDGFTFPLVLRASSNMGSF 159
P + + W ++I H +AL + +M + + FT V++A++
Sbjct: 122 MP---QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 181
Query: 160 NLCKNLHCHVVQFGLQNHLHVVNELIGMYAKLERMDDARKVFDKMRIKSVVSWNIMVSAY 219
LH V+ G +++HV + L+ +Y + MDDA+ VFD + ++ VSWN +++ +
Sbjct: 182 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 241
Query: 220 AYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFSKMRMKSVGATA 279
A A +F M +G P+ ++ SL +
Sbjct: 242 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGA-------------------------- 301
Query: 280 EMLAVVLSVCADLATLNRGQMIHGYMVKGGFNDYLFAKNALITVYGKGGDLGDAEKLFHE 339
C+ L +G+ +H YM+K G FA N L+ +Y K G + DA K+F
Sbjct: 302 ---------CSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 361
Query: 340 MKAKNLVSWNALISAYAESGSYDKAFELFSQLEKMEEVYPEMKPNVITWSAVICGFASKG 399
+ +++VSWN+L++AYA+ G +A F ++ ++ ++PN I++ +V+ + G
Sbjct: 362 LAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV-----GIRPNEISFLSVLTACSHSG 421
Query: 400 LGEESLEVFRKMQLANVKANSVTIASVLSICATLAALNLEASNIVKGMPIEPNAYIWSAL 459
L +E + M+ + + +V+ + LN A ++ MPIEP A IW AL
Sbjct: 422 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLN-RALRFIEEMPIEPTAAIWKAL 481
Query: 460 LNSCRMHKDTDLAEETASQIFNLNSEITGSHMLLSNIFAASCRWEDSARVRISARMKGLK 519
LN+CRMHK+T+L A +F L+ + G H++L NI+A+ RW D+ARVR + G+K
Sbjct: 482 LNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVK 515
Query: 520 KVPGCSWIEVKKKVYMFKA 535
K P CSW+E++ ++MF A
Sbjct: 542 KEPACSWVEIENAIHMFVA 515
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038903135.1 | 3.4e-281 | 73.97 | putative pentatricopeptide repeat-containing protein At1g17630 [Benincasa hispid... | [more] |
XP_004146851.1 | 6.5e-272 | 71.55 | putative pentatricopeptide repeat-containing protein At1g17630 [Cucumis sativus] | [more] |
KAA0051178.1 | 6.7e-269 | 70.98 | putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
XP_008447611.1 | 1.3e-267 | 70.98 | PREDICTED: putative pentatricopeptide repeat-containing protein At1g17630 [Cucum... | [more] |
XP_023523771.1 | 9.1e-258 | 68.21 | putative pentatricopeptide repeat-containing protein At1g17630 [Cucurbita pepo s... | [more] |
Match Name | E-value | Identity | Description | |
Q9LNP2 | 1.2e-124 | 38.81 | Putative pentatricopeptide repeat-containing protein At1g17630 OS=Arabidopsis th... | [more] |
Q9SIL5 | 5.9e-66 | 31.26 | Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... | [more] |
Q9LW63 | 1.4e-64 | 29.98 | Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... | [more] |
Q9STF3 | 5.5e-64 | 30.08 | Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... | [more] |
Q9LIQ7 | 1.6e-63 | 29.06 | Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LFT1 | 3.1e-272 | 71.55 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848280 PE=4 SV=1 | [more] |
A0A5A7U7B1 | 3.3e-269 | 70.98 | Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... | [more] |
A0A5D3BVI7 | 6.1e-268 | 70.98 | Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... | [more] |
A0A1S3BIG8 | 6.1e-268 | 70.98 | putative pentatricopeptide repeat-containing protein At1g17630 OS=Cucumis melo O... | [more] |
A0A6J1KAZ0 | 9.8e-258 | 68.21 | putative pentatricopeptide repeat-containing protein At1g17630 OS=Cucurbita maxi... | [more] |
Match Name | E-value | Identity | Description | |
AT1G17630.1 | 8.8e-126 | 38.81 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT2G20540.1 | 4.2e-67 | 31.26 | mitochondrial editing factor 21 | [more] |
AT3G23330.1 | 1.0e-65 | 29.98 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G46790.1 | 3.9e-65 | 30.08 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G24000.1 | 1.1e-64 | 29.06 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |