HG10002330 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002330
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	PRA1 family protein
Location	Chr11: 5652224 .. 5652766 (-)
RNA-Seq Expression	HG10002330
Synteny	HG10002330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAATTACGGCACCATTCCGACCTCCTCCGCCGCCGCCGCCAACCTCGAGTACATCTCCCGCGCCAAACAGCGCTTCAAAGACGGCCTAGGGCACCGCCGTCCATGGCGTCTGATCGCCGATTACCGCTCCTTCACTCTCCCTTCCAACCTCCACGACACTCTCGCTCGCATCAAAATCAATCTCGCTTACTTCCGTATGAACTACGCCATCGTCGTCCTCGTAATCCTCTTCCTCTCCCTCCTCTGGCATCCGATTTCCCTCCTCGTCCTCATCCTCATGTTGTCTCTCTGGCTCTTCCTCTACTTTCTCCGCGATCAGCCTCTCATTCTCGCCGGCCGCGTCCTCGAAGATTGGATCATTCTCCTCATCCTCTCCGTTCTCACCATCGGATTCTTGTTCTTGACCAACGCCACACTCAACATTCTCATCGCTCTGCTCGTCGGCGCCGCCATCGTTTTGGCGCACGCCGCCGTGAGGAAGACCGATAATCTCTACTTGGATGAAGAAGAAACCGGATTGATCGCGCCTGGATCGTAA

mRNA sequence

ATGACCAATTACGGCACCATTCCGACCTCCTCCGCCGCCGCCGCCAACCTCGAGTACATCTCCCGCGCCAAACAGCGCTTCAAAGACGGCCTAGGGCACCGCCGTCCATGGCGTCTGATCGCCGATTACCGCTCCTTCACTCTCCCTTCCAACCTCCACGACACTCTCGCTCGCATCAAAATCAATCTCGCTTACTTCCGTATGAACTACGCCATCGTCGTCCTCGTAATCCTCTTCCTCTCCCTCCTCTGGCATCCGATTTCCCTCCTCGTCCTCATCCTCATGTTGTCTCTCTGGCTCTTCCTCTACTTTCTCCGCGATCAGCCTCTCATTCTCGCCGGCCGCGTCCTCGAAGATTGGATCATTCTCCTCATCCTCTCCGTTCTCACCATCGGATTCTTGTTCTTGACCAACGCCACACTCAACATTCTCATCGCTCTGCTCGTCGGCGCCGCCATCGTTTTGGCGCACGCCGCCGTGAGGAAGACCGATAATCTCTACTTGGATGAAGAAGAAACCGGATTGATCGCGCCTGGATCGTAA

Coding sequence (CDS)

ATGACCAATTACGGCACCATTCCGACCTCCTCCGCCGCCGCCGCCAACCTCGAGTACATCTCCCGCGCCAAACAGCGCTTCAAAGACGGCCTAGGGCACCGCCGTCCATGGCGTCTGATCGCCGATTACCGCTCCTTCACTCTCCCTTCCAACCTCCACGACACTCTCGCTCGCATCAAAATCAATCTCGCTTACTTCCGTATGAACTACGCCATCGTCGTCCTCGTAATCCTCTTCCTCTCCCTCCTCTGGCATCCGATTTCCCTCCTCGTCCTCATCCTCATGTTGTCTCTCTGGCTCTTCCTCTACTTTCTCCGCGATCAGCCTCTCATTCTCGCCGGCCGCGTCCTCGAAGATTGGATCATTCTCCTCATCCTCTCCGTTCTCACCATCGGATTCTTGTTCTTGACCAACGCCACACTCAACATTCTCATCGCTCTGCTCGTCGGCGCCGCCATCGTTTTGGCGCACGCCGCCGTGAGGAAGACCGATAATCTCTACTTGGATGAAGAAGAAACCGGATTGATCGCGCCTGGATCGTAA

Protein sequence

MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKINLAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRVLEDWIILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEEETGLIAPGS

Homology

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BLAST of HG10002330 vs. NCBI nr
Match: XP_038899674.1 (PRA1 family protein F2 [Benincasa hispida])

HSP 1 Score: 321.2 bits (822), Expect = 5.5e-84
Identity = 173/180 (96.11%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIK 60
           MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTL+RIK
Sbjct: 1   MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLSRIK 60

Query: 61  INLAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRVLEDW 120
           INLAYFRMNYAIVVLVILFL+LLWHPISLLVL LMLSLWLFLYFLRDQPLILAGR+LEDW
Sbjct: 61  INLAYFRMNYAIVVLVILFLALLWHPISLLVLFLMLSLWLFLYFLRDQPLILAGRILEDW 120

Query: 121 IILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEEETGLIAPGS 180
           IILLILS+LTIGFLFLTNATLNILIALLVGAA+VLAHAAVRKTDNLYLDEE TGLIAPGS
Sbjct: 121 IILLILSILTIGFLFLTNATLNILIALLVGAAVVLAHAAVRKTDNLYLDEEATGLIAPGS 180

[Close]

BLAST of HG10002330 vs. NCBI nr
Match: KAE8651294.1 (hypothetical protein Csa_001744 [Cucumis sativus])

HSP 1 Score: 311.2 bits (796), Expect = 5.7e-81
Identity = 169/181 (93.37%), Postives = 176/181 (97.24%), Query Frame = 0


Query: 1   MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIK 60
           MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWRLIADY SFTLPSNLHDTL+RIK
Sbjct: 31  MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWRLIADYHSFTLPSNLHDTLSRIK 90

Query: 61  INLAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRVLEDW 120
           INL YFRMNYAIVVLV+LFL+LLWHPISLLVL LMLSLWLFLYFLRDQPLILAGRVLEDW
Sbjct: 91  INLTYFRMNYAIVVLVVLFLALLWHPISLLVLFLMLSLWLFLYFLRDQPLILAGRVLEDW 150

Query: 121 IILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEEE-TGLIAPG 180
           IILL+LS+ T+GFLFLTNATLNILIALLVGAA+VLAHAAVRKTDNLYLDEEE TGLIAPG
Sbjct: 151 IILLLLSLFTLGFLFLTNATLNILIALLVGAALVLAHAAVRKTDNLYLDEEEATGLIAPG 210

[Close]

BLAST of HG10002330 vs. NCBI nr
Match: XP_011652356.1 (PRA1 family protein F2 [Cucumis sativus])

HSP 1 Score: 311.2 bits (796), Expect = 5.7e-81
Identity = 169/181 (93.37%), Postives = 176/181 (97.24%), Query Frame = 0


Query: 1   MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIK 60
           MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWRLIADY SFTLPSNLHDTL+RIK
Sbjct: 1   MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWRLIADYHSFTLPSNLHDTLSRIK 60

Query: 61  INLAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRVLEDW 120
           INL YFRMNYAIVVLV+LFL+LLWHPISLLVL LMLSLWLFLYFLRDQPLILAGRVLEDW
Sbjct: 61  INLTYFRMNYAIVVLVVLFLALLWHPISLLVLFLMLSLWLFLYFLRDQPLILAGRVLEDW 120

Query: 121 IILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEEE-TGLIAPG 180
           IILL+LS+ T+GFLFLTNATLNILIALLVGAA+VLAHAAVRKTDNLYLDEEE TGLIAPG
Sbjct: 121 IILLLLSLFTLGFLFLTNATLNILIALLVGAALVLAHAAVRKTDNLYLDEEEATGLIAPG 180

[Close]

BLAST of HG10002330 vs. NCBI nr
Match: XP_008447601.1 (PREDICTED: PRA1 family protein F2-like [Cucumis melo])

HSP 1 Score: 310.1 bits (793), Expect = 1.3e-80
Identity = 170/181 (93.92%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 1   MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIK 60
           MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWR IADYRSF LPSNLHDTL+RIK
Sbjct: 1   MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWRQIADYRSFALPSNLHDTLSRIK 60

Query: 61  INLAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRVLEDW 120
            NLAYFRMNYAIVVLVILFLSLLWHPISLLVL LMLSLWLFLYFLRDQPLILAGRV+EDW
Sbjct: 61  FNLAYFRMNYAIVVLVILFLSLLWHPISLLVLFLMLSLWLFLYFLRDQPLILAGRVIEDW 120

Query: 121 IILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEEE-TGLIAPG 180
           IILL+LS+LTIGFLFLTNAT NILIALLVGAA+VLAHAAVRKTDNLYLDEEE TGLIAPG
Sbjct: 121 IILLVLSLLTIGFLFLTNATPNILIALLVGAAVVLAHAAVRKTDNLYLDEEEATGLIAPG 180

[Close]

BLAST of HG10002330 vs. NCBI nr
Match: XP_023528097.1 (PRA1 family protein F3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 299.7 bits (766), Expect = 1.7e-77
Identity = 158/184 (85.87%), Postives = 176/184 (95.65%), Query Frame = 0


Query: 1   MTNYGTIPTSSAA----AANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTL 60
           MT+YGTIPTS AA    AANLEYISRAKQRFKDGLGHRRPWRL+ADYRSFTLPSNLHDTL
Sbjct: 1   MTDYGTIPTSYAAAAATAANLEYISRAKQRFKDGLGHRRPWRLMADYRSFTLPSNLHDTL 60

Query: 61  ARIKINLAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRV 120
           ARIKINLAYFRMNYAIV+L+ILFL+LLWHPISL+V +LM+SLWLFLYFLRDQPL++AGRV
Sbjct: 61  ARIKINLAYFRMNYAIVILIILFLALLWHPISLIVFVLMMSLWLFLYFLRDQPLVIAGRV 120

Query: 121 LEDWIILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEEETGLI 180
           L+DWIILL+LSVLTIGFLFLTNA+LNILIAL++GA +VLAHAAVRKT+NLYLDEE TGL+
Sbjct: 121 LQDWIILLVLSVLTIGFLFLTNASLNILIALIIGAVVVLAHAAVRKTENLYLDEEATGLM 180

[Close]

BLAST of HG10002330 vs. ExPASy Swiss-Prot
Match: Q9C889 (PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.5e-44
Identity = 103/173 (59.54%), Postives = 130/173 (75.14%), Query Frame = 0


Query: 1   MTNYGTIPTSS--AAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLAR 60
           MTNYG IPTSS  + A +LEYISRAK R K GL  RRPW+ + D+ S TLP    D ++R
Sbjct: 1   MTNYGAIPTSSHPSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISR 60

Query: 61  IKINLAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRVLE 120
           IK NL YFR NYAI VL ILFLSLL+HP SL+VL +++  W+FLYFLRD+PL++ G  ++
Sbjct: 61  IKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQID 120

Query: 121 DWIILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEE 172
           D  +L+ LSVLT+  L LT+AT NIL +LL  A +VL HAAVR++DNL+LDEE
Sbjct: 121 DRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEE 173

[Close]

BLAST of HG10002330 vs. ExPASy Swiss-Prot
Match: Q9LIC6 (PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.4e-42
Identity = 96/173 (55.49%), Postives = 129/173 (74.57%), Query Frame = 0


Query: 1   MTNYGTIPTSSAAA--ANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLAR 60
           MTNYG IPTSS A+   ++E +SRAK R K GL  RR WR++ D+ S  LP  + D   R
Sbjct: 1   MTNYGAIPTSSHASPLVDVESLSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTR 60

Query: 61  IKINLAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRVLE 120
           IK NLAYFRMNYAIVVL+++F SL+WHP SL+V  +++ +W+FLYFLRD+P+ L    ++
Sbjct: 61  IKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQID 120

Query: 121 DWIILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEE 172
           D  +L++LSVLT+  L LTNAT NI+ AL+ GA +VL H+ VRKT++L+LDEE
Sbjct: 121 DRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEE 173

[Close]

BLAST of HG10002330 vs. ExPASy Swiss-Prot
Match: Q9LIC7 (PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.1e-38
Identity = 97/173 (56.07%), Postives = 121/173 (69.94%), Query Frame = 0


Query: 1   MTNYGTIPTSSAA--AANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLAR 60
           M N   I TSS A  A N E ISRAKQR KDGL  RR WR++ D  S  LP  + D  +R
Sbjct: 1   MANNDEITTSSHASPAVNHESISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSR 60

Query: 61  IKINLAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRVLE 120
           IK NLAYFR NYAIV+L ++F SL+WHP SL+V   ++ LW+FLYFLRD PL +    ++
Sbjct: 61  IKTNLAYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQID 120

Query: 121 DWIILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEE 172
           D  +L+ LSV+TI  L LTNAT NI+ AL+ GA +VL HA +RKTD+L+LDEE
Sbjct: 121 DRAVLIGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEE 173

[Close]

BLAST of HG10002330 vs. ExPASy Swiss-Prot
Match: Q9FZ63 (PRA1 family protein F1 OS=Arabidopsis thaliana OX=3702 GN=PRA1F1 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.9e-37
Identity = 92/180 (51.11%), Postives = 123/180 (68.33%), Query Frame = 0


Query: 1   MTNYGTIPTSS-AAAANLEYISRA-KQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLAR 60
           MT YGT   SS   A  LEYI+R   Q  + GL  RRPW+ + D  SF  P  L   + R
Sbjct: 1   MTTYGTNQKSSNDLAPKLEYITRGINQHKRSGLATRRPWKQMLDLGSFNFPRKLATVITR 60

Query: 61  IKINLAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRVLE 120
           I+ N  YF+ NY IVVL  +FLSL+W+P SLLVL+ +L  WLFLYFLRD+PL +  R ++
Sbjct: 61  IRANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLRDEPLTVFDREID 120

Query: 121 DWIILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEEETGLIAP 179
             I+L+I+SV+T+  LFLT+A LNI +A++ GA  VL+HAAVRKT++L+  +EET L+ P
Sbjct: 121 HRIVLIIMSVITLSILFLTDAKLNIAVAIVAGALAVLSHAAVRKTEDLFQTDEETSLLNP 180

[Close]

BLAST of HG10002330 vs. ExPASy Swiss-Prot
Match: Q9FRR1 (PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.0e-24
Identity = 71/182 (39.01%), Postives = 118/182 (64.84%), Query Frame = 0


Query: 5   GTIPTSSAAAANLEYIS-RAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKINL 64
           G  P+S++    +  +S RAKQ  +  +   RPWR I D  + +LP    + +A +K N+
Sbjct: 17  GVGPSSTSNTTIIGTLSARAKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNI 76

Query: 65  AYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRD--QPLILAGRVLEDWI 124
           +YFR NYA+ VL I+FL L++HP+S++  I++   W+ LYF RD    ++++G+ ++D I
Sbjct: 77  SYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKI 136

Query: 125 ILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEEET---GLIAP 181
           +L++LS++T+  L  T+   N+L++L++G  IV AH A R TD+L+LDEE     GL++ 
Sbjct: 137 VLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVSA 196

[Close]

BLAST of HG10002330 vs. ExPASy TrEMBL
Match: A0A0A0LDF6 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_3G848860 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.8e-81
Identity = 169/181 (93.37%), Postives = 176/181 (97.24%), Query Frame = 0


Query: 1   MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIK 60
           MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWRLIADY SFTLPSNLHDTL+RIK
Sbjct: 1   MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWRLIADYHSFTLPSNLHDTLSRIK 60

Query: 61  INLAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRVLEDW 120
           INL YFRMNYAIVVLV+LFL+LLWHPISLLVL LMLSLWLFLYFLRDQPLILAGRVLEDW
Sbjct: 61  INLTYFRMNYAIVVLVVLFLALLWHPISLLVLFLMLSLWLFLYFLRDQPLILAGRVLEDW 120

Query: 121 IILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEEE-TGLIAPG 180
           IILL+LS+ T+GFLFLTNATLNILIALLVGAA+VLAHAAVRKTDNLYLDEEE TGLIAPG
Sbjct: 121 IILLLLSLFTLGFLFLTNATLNILIALLVGAALVLAHAAVRKTDNLYLDEEEATGLIAPG 180

[Close]

BLAST of HG10002330 vs. ExPASy TrEMBL
Match: A0A1S3BIR1 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103490013 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.2e-81
Identity = 170/181 (93.92%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 1   MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIK 60
           MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWR IADYRSF LPSNLHDTL+RIK
Sbjct: 1   MTNYGTIPTSSAAAANLEYISRAKQRFKDGLGHRRPWRQIADYRSFALPSNLHDTLSRIK 60

Query: 61  INLAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRVLEDW 120
            NLAYFRMNYAIVVLVILFLSLLWHPISLLVL LMLSLWLFLYFLRDQPLILAGRV+EDW
Sbjct: 61  FNLAYFRMNYAIVVLVILFLSLLWHPISLLVLFLMLSLWLFLYFLRDQPLILAGRVIEDW 120

Query: 121 IILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEEE-TGLIAPG 180
           IILL+LS+LTIGFLFLTNAT NILIALLVGAA+VLAHAAVRKTDNLYLDEEE TGLIAPG
Sbjct: 121 IILLVLSLLTIGFLFLTNATPNILIALLVGAAVVLAHAAVRKTDNLYLDEEEATGLIAPG 180

[Close]

BLAST of HG10002330 vs. ExPASy TrEMBL
Match: A0A6J1GW95 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111458066 PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.2e-77
Identity = 156/183 (85.25%), Postives = 175/183 (95.63%), Query Frame = 0


Query: 1   MTNYGTIPTS----SAAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTL 60
           MT+YGTIPTS    +A AANLEYISRAKQRFKDGLGHRRPWRL+ADYRSFTLPSNLHDTL
Sbjct: 1   MTDYGTIPTSYGAATATAANLEYISRAKQRFKDGLGHRRPWRLMADYRSFTLPSNLHDTL 60

Query: 61  ARIKINLAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRV 120
           ARIKINLAYFRMNYAIV+L+ILFL+LLWHPISL+V +LM+SLWLFLYFLRDQPL++AGRV
Sbjct: 61  ARIKINLAYFRMNYAIVILIILFLALLWHPISLIVFVLMMSLWLFLYFLRDQPLVIAGRV 120

Query: 121 LEDWIILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEEETGLI 180
           L+DWIILL+LSVLTIGFLFLTNA+LNILIAL++GA +VLAHAAVRKT+NLYLDEE TGL+
Sbjct: 121 LQDWIILLVLSVLTIGFLFLTNASLNILIALIIGAVVVLAHAAVRKTENLYLDEEATGLM 180

[Close]

BLAST of HG10002330 vs. ExPASy TrEMBL
Match: A0A6J1K8D2 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111492618 PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 5.4e-77
Identity = 158/178 (88.76%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 4   YGTIPTSSA-AAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKIN 63
           YGTIPTSSA AAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIK+N
Sbjct: 47  YGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKVN 106

Query: 64  LAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRVLEDWII 123
           LAYFRMNYAIVVLVILFL+LLWHPISL+VLI+M++LWLFLYFLRDQPLILAGRV+EDW+I
Sbjct: 107 LAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDWVI 166

Query: 124 LLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEEETGLIAPGS 181
           LLILS+ TIGFLFLTNATLNI+IALL+GA +V+AHAAVRKT+NLYLDEE  GL+APGS
Sbjct: 167 LLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS 224

[Close]

BLAST of HG10002330 vs. ExPASy TrEMBL
Match: A0A6J1GBU7 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111452555 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.2e-76
Identity = 157/178 (88.20%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 4   YGTIPTSSA-AAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKIN 63
           YGTIPTSSA AAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTL+RIK+N
Sbjct: 3   YGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLSRIKVN 62

Query: 64  LAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRVLEDWII 123
           LAYFRMNYAIVVLVILFL+LLWHPISL+VLI+M++LWLFLYFLRDQPLILAGRV+EDW+I
Sbjct: 63  LAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDWVI 122

Query: 124 LLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEEETGLIAPGS 181
           LLILS+ TIGFLFLTNATLNI+IALL+GA +V+AHAAVRKT+NLYLDEE  GL+APGS
Sbjct: 123 LLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS 180

[Close]

BLAST of HG10002330 vs. TAIR 10
Match: AT1G55190.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 179.1 bits (453), Expect = 3.2e-45
Identity = 103/173 (59.54%), Postives = 130/173 (75.14%), Query Frame = 0


Query: 1   MTNYGTIPTSS--AAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLAR 60
           MTNYG IPTSS  + A +LEYISRAK R K GL  RRPW+ + D+ S TLP    D ++R
Sbjct: 1   MTNYGAIPTSSHPSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISR 60

Query: 61  IKINLAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRVLE 120
           IK NL YFR NYAI VL ILFLSLL+HP SL+VL +++  W+FLYFLRD+PL++ G  ++
Sbjct: 61  IKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQID 120

Query: 121 DWIILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEE 172
           D  +L+ LSVLT+  L LT+AT NIL +LL  A +VL HAAVR++DNL+LDEE
Sbjct: 121 DRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEE 173

[Close]

BLAST of HG10002330 vs. TAIR 10
Match: AT3G13720.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 173.3 bits (438), Expect = 1.7e-43
Identity = 96/173 (55.49%), Postives = 129/173 (74.57%), Query Frame = 0


Query: 1   MTNYGTIPTSSAAA--ANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLAR 60
           MTNYG IPTSS A+   ++E +SRAK R K GL  RR WR++ D+ S  LP  + D   R
Sbjct: 1   MTNYGAIPTSSHASPLVDVESLSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTR 60

Query: 61  IKINLAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRVLE 120
           IK NLAYFRMNYAIVVL+++F SL+WHP SL+V  +++ +W+FLYFLRD+P+ L    ++
Sbjct: 61  IKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQID 120

Query: 121 DWIILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEE 172
           D  +L++LSVLT+  L LTNAT NI+ AL+ GA +VL H+ VRKT++L+LDEE
Sbjct: 121 DRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEE 173

[Close]

BLAST of HG10002330 vs. TAIR 10
Match: AT3G13710.1 (prenylated RAB acceptor 1.F4 )

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-39
Identity = 97/173 (56.07%), Postives = 121/173 (69.94%), Query Frame = 0


Query: 1   MTNYGTIPTSSAA--AANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLAR 60
           M N   I TSS A  A N E ISRAKQR KDGL  RR WR++ D  S  LP  + D  +R
Sbjct: 1   MANNDEITTSSHASPAVNHESISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSR 60

Query: 61  IKINLAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRVLE 120
           IK NLAYFR NYAIV+L ++F SL+WHP SL+V   ++ LW+FLYFLRD PL +    ++
Sbjct: 61  IKTNLAYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQID 120

Query: 121 DWIILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEE 172
           D  +L+ LSV+TI  L LTNAT NI+ AL+ GA +VL HA +RKTD+L+LDEE
Sbjct: 121 DRAVLIGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEE 173

[Close]

BLAST of HG10002330 vs. TAIR 10
Match: AT1G17700.1 (prenylated RAB acceptor 1.F1 )

HSP 1 Score: 155.2 bits (391), Expect = 4.9e-38
Identity = 92/180 (51.11%), Postives = 123/180 (68.33%), Query Frame = 0


Query: 1   MTNYGTIPTSS-AAAANLEYISRA-KQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLAR 60
           MT YGT   SS   A  LEYI+R   Q  + GL  RRPW+ + D  SF  P  L   + R
Sbjct: 1   MTTYGTNQKSSNDLAPKLEYITRGINQHKRSGLATRRPWKQMLDLGSFNFPRKLATVITR 60

Query: 61  IKINLAYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRDQPLILAGRVLE 120
           I+ N  YF+ NY IVVL  +FLSL+W+P SLLVL+ +L  WLFLYFLRD+PL +  R ++
Sbjct: 61  IRANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLRDEPLTVFDREID 120

Query: 121 DWIILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEEETGLIAP 179
             I+L+I+SV+T+  LFLT+A LNI +A++ GA  VL+HAAVRKT++L+  +EET L+ P
Sbjct: 121 HRIVLIIMSVITLSILFLTDAKLNIAVAIVAGALAVLSHAAVRKTEDLFQTDEETSLLNP 180

[Close]

BLAST of HG10002330 vs. TAIR 10
Match: AT1G08770.1 (prenylated RAB acceptor 1.E )

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-25
Identity = 71/182 (39.01%), Postives = 118/182 (64.84%), Query Frame = 0


Query: 5   GTIPTSSAAAANLEYIS-RAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKINL 64
           G  P+S++    +  +S RAKQ  +  +   RPWR I D  + +LP    + +A +K N+
Sbjct: 17  GVGPSSTSNTTIIGTLSARAKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNI 76

Query: 65  AYFRMNYAIVVLVILFLSLLWHPISLLVLILMLSLWLFLYFLRD--QPLILAGRVLEDWI 124
           +YFR NYA+ VL I+FL L++HP+S++  I++   W+ LYF RD    ++++G+ ++D I
Sbjct: 77  SYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKI 136

Query: 125 ILLILSVLTIGFLFLTNATLNILIALLVGAAIVLAHAAVRKTDNLYLDEEET---GLIAP 181
           +L++LS++T+  L  T+   N+L++L++G  IV AH A R TD+L+LDEE     GL++ 
Sbjct: 137 VLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVSA 196

The following BLAST results are available for this feature:

BLAST of HG10002330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899674.1	5.5e-84	96.11	PRA1 family protein F2 [Benincasa hispida]	[more]
KAE8651294.1	5.7e-81	93.37	hypothetical protein Csa_001744 [Cucumis sativus]	[more]
XP_011652356.1	5.7e-81	93.37	PRA1 family protein F2 [Cucumis sativus]	[more]
XP_008447601.1	1.3e-80	93.92	PREDICTED: PRA1 family protein F2-like [Cucumis melo]	[more]
XP_023528097.1	1.7e-77	85.87	PRA1 family protein F3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10002330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C889	4.5e-44	59.54	PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1	[more]
Q9LIC6	2.4e-42	55.49	PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1	[more]
Q9LIC7	2.1e-38	56.07	PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1	[more]
Q9FZ63	6.9e-37	51.11	PRA1 family protein F1 OS=Arabidopsis thaliana OX=3702 GN=PRA1F1 PE=1 SV=1	[more]
Q9FRR1	3.0e-24	39.01	PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1	[more]

BLAST of HG10002330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDF6	2.8e-81	93.37	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_3G848860 PE=3 SV=1	[more]
A0A1S3BIR1	6.2e-81	93.92	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103490013 PE=3 SV=1	[more]
A0A6J1GW95	3.2e-77	85.25	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111458066 PE=3 SV=1	[more]
A0A6J1K8D2	5.4e-77	88.76	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111492618 PE=3 SV=1	[more]
A0A6J1GBU7	1.2e-76	88.20	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111452555 PE=3 SV=1	[more]

BLAST of HG10002330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55190.1	3.2e-45	59.54	PRA1 (Prenylated rab acceptor) family protein	[more]
AT3G13720.1	1.7e-43	55.49	PRA1 (Prenylated rab acceptor) family protein	[more]
AT3G13710.1	1.5e-39	56.07	prenylated RAB acceptor 1.F4	[more]
AT1G17700.1	4.9e-38	51.11	prenylated RAB acceptor 1.F1	[more]
AT1G08770.1	2.1e-25	39.01	prenylated RAB acceptor 1.E	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 31..171 e-value: 1.4E-43 score: 147.9
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..175
None	No IPR available	PANTHER	PTHR19317:SF2	PRA1 FAMILY PROTEIN F2	coord: 1..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002330.1	HG10002330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane