HG10002277 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002277
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Transcription factor bHLH68-like isoform X1
Location	Chr11: 5095405 .. 5098811 (-)
RNA-Seq Expression	HG10002277
Synteny	HG10002277

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGGTGGAAACCCTAGTAATTGGTGGAATAATAATATGTTTCCACTTAATTCTCCTCAATTTGTTCTTGGATCATCTTCACTTCCTTTGAATCCAATGGCTGATCACCATCACCATAATCAAGACCTCAATTCACAATCATGGAGTCAATTACTTTTGTAAAAATTTCAAATTTCCTCTTTATTTTAATTTTCCTCTACTATTTTTATGGAATAATAATTTTAAATTTTGTTCCCTTTACTTGTTTATAATTTGTGTTTTCAGAGGTGGAATGCAAGAAGAGGATGATCTTGATCAAGATAGGTTGAGTTTGAATAACAACAACAACAATAATCATTTTCAACCAAAAAAGTTGGAAAATTTGGAGGGGAGAATATTGATTCCATTTTCAAGATTTGGAGTTGGTGATGATAATGATGATCATGATCATCATTATCATCATGAGCTGAAGCAAGAAACTTGTTCACAAAATAATAGTAAGAATTTTTCCATTTTTTTGGAATAATTATAATGAAAATAATCCATTATCATATTATTATCTTCTTCTTCTTCTTCATCAGCTAAGCCCTCTCAAATAACAAGGCCACCAACTACTTCTTCTTCTCCAAAATCTTCTGTGAATAGTAATAATGGTATATTGGATTTCTCTTTCAACAATGTTGATTCCAAAAATCAAATCCTTGATCACAATTATTCATCTGAGGTAAAAATTATATATATATATATATATATATTTAACTTCATTTTTATTTATTTATTTATTTATATTTTTAATTTTGAAATTGTGTTCTATGATCAAGTGTGCTAGCACAGCCACCAATGGGGGAGTGTGGAAGAAGGCTAGGGTTCAGTCGCCCTCCGGCCAGCCTCCGATAAAGGTAAACATGACGGAAAAACGAACTCTGTGTCAAATATTGGATTAAAACATTAAAACAGACTGTCAAATTAATTTTTTTTTTCTTTTTCCTCAAATTAGTATTAAAATTCAGTGTTTTTATTTATTTTTTTATTTATTTTGTGTTGTGAATAAGGTGAGAAAGGAGAAGGTAGGGGATAGAATCACAGCTCTCCACCAGCTGGTTTCTCCATTTGGAAAGGTATAAATTAATTAAAGAAAGATAATTGTTTTAAGATCATTGCCATTCTCTGATCTCTCTTCTTCAGTTCAATATACCAAAAAAAAAAAAAAAAAAAAATATTCTGTATGTTTTCTTTCAGTTCATATTGGCCTTTTTCTTCTTGTTTATGACCTTAAAAGAATACTTCTCCATGTTGTGGTGTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTTTTTTGTGTTTTTTTGCAGACTGACACTGCTTCTGTCTTGTCAGAGGCTATTGGGTATGTGAGATTCCTTCAGAGTCAGATTGAGGTCAAGTTTTCTCTAAACTTCTTCATTTTTTTTCTTTTTACTCTGAAAATCCCCTAATACCCAATTGAAAAGAAGTCATTGCAGTCCAAAATTTTGTGAATTTAATGATTCTTCTTCCAAGTTTCTTTTATTTTTGTTTCATTTTTTAAAATAGAATTGTTGAATATATTTCTAATTTCAGGCTCTCATCTCTCCATATTTGGGCAATTCATCAAAATCCACAAAGAAAAAGGAGCAAATTGTAAGTTTTCTTTTCTTCAAAACCCCATTTGACATTTTTTTTCTCCATATAACCAAAAAGAAAAATCCCTTTTTTAAAATTAAAGAAAAAGTTGAAAACTTTGACCCAATTTCTACATTTCCATTCAAACCCCAATATCATTCCTTTATCTATAAAGTGAAAAGATAATGAAAACTAATTATATTATGAATATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTAATTTGAAGAGAACATTAAATGATGGGAGAAATTTGAGAGAAGTTGAAGGTGAATTTCCTGAAGACACTGGTCAGGTATGCTTTTATTGGATCGATCGTTCTTAAGTAAAGAGAGAAGATCAAAAGGGGGGCTTCAAATGAAAGCATCTAAAAAAAAAAAAATTAAAATATAAAAAAAAAAAGAAAAAAGAAAAAGCAAAATTATATTTTATTTCATAAAGGAAAGAAGTGAAAGAACAAGGTTCTCAGCTTTTTTATACAACTTTATCATTATTTAAAAGTTACCCAAAAGCATTGGTTTGTGACTTCCTAATTGTTTTGGAATCATTTAAAGGGTTTGCTAAAAATTGCATCTTTTTTCTTTATATTAAAAAAGAATATATATTAGTTATATGTTTTTCTTTTTTGGCCATTGCAGCTCTTGAATGACAATAGCCTGAAAAGAAAACTACCTTCTTCCCAGGTGTGCTTTAATCTTCTCTCTATGTATTTGTGTTTGTTTATTAGCAATTACACACACCCATCATTCTCATCATCATATTTAGGATAATATAGGCATATCATTCTATCTATATAGTTAAATCTAGGGCATAAAATGGAAATCAATCTATATTTAACAAAGTTATATATATATATATGTTTTGAGTGCAAAGTGAAAGTATTACTTTATCTACTATGCTCGAATTGACACCTACGTTTTCTCTTAACTTTCCCATATTGATCATTTTTGTGTTTAAAATTTGAAAATATCGAACTTAAAAGTATTTAGTGTAAAAAATTAGGTCTTTCAAATGTTGAGTACTTTTTTTTTTTTTTTTTTTTTACTTGTTAGAATGTGCTAGTAAAACATGTGATACTTTTAAATCTGTCTTCTTAAAGATTACTGAGTTTCATATTCATTTAGACAAGACATTTGAAATAGTGAAAATGAGAAATAAATCCGGGGTATAATGAGAGTGATAAGGATGTGTCGACCTAATTGAAATATCCCGGTGCACCTCCTAATTTCTCTTTCCTCTACTATCTTATTAATAAAATTGTTAGACCTATAACCATTTGATTTTATGTGTCTGGTCCTCCCACTTCCTTTCTTTACGACGATTTCATCTTTCTTAAGGAAAAGCCTAAATTTCCAACTAATAATAACAATAGTAAACAAATAAATAAATAATTAAAAATGACATTTTTTTAGTTTCTTGAAATTTTGGTATTAAAAAAAATTACATGTGCGAGCTATATTTATAAGCTCAACTATAGAAACCAAAATACCAAAAAACAAGATCGATATAGTTATCAAATGAAGTTTTAGTAAACTAGCTTTAATTTTCGAAAATGAAAAACATAGACATCATCAAACTCGGTTACCAAACAGATCGTTTTGAGTTATTTTGAGTATTATGTTTTTATGGACAGGAGGAAGAAGCAAAGGACTTGAGGGGTAGAGGGCTTTGTTTAGTACCTGTATCTTGTACACAACATGTACAAAGTGACATTAATGGAGCTGATTATTGGGCTCAAGCTTACAATGGCACTTTCTAA

mRNA sequence

ATGATGGGTGGAAACCCTACTAAGCCCTCTCAAATAACAAGGCCACCAACTACTTCTTCTTCTCCAAAATCTTCTGTGAATAGTAATAATGGTATATTGGATTTCTCTTTCAACAATGTTGATTCCAAAAATCAAATCCTTGATCACAATTATTCATCTGAGTGTGCTAGCACAGCCACCAATGGGGGAGTGTGGAAGAAGGCTAGGGTTCAGTCGCCCTCCGGCCAGCCTCCGATAAAGGTGAGAAAGGAGAAGGTAGGGGATAGAATCACAGCTCTCCACCAGCTGGTTTCTCCATTTGGAAAGACTGACACTGCTTCTGTCTTGTCAGAGGCTATTGGGTATGTGAGATTCCTTCAGAGTCAGATTGAGGCTCTCATCTCTCCATATTTGGGCAATTCATCAAAATCCACAAAGAAAAAGGAGCAAATTAGAACATTAAATGATGGGAGAAATTTGAGAGAAGTTGAAGGTGAATTTCCTGAAGACACTGGTCAGGAGGAAGAAGCAAAGGACTTGAGGGGTAGAGGGCTTTGTTTAGTACCTGTATCTTGTACACAACATGTACAAAGTGACATTAATGGAGCTGATTATTGGGCTCAAGCTTACAATGGCACTTTCTAA

Coding sequence (CDS)

ATGATGGGTGGAAACCCTACTAAGCCCTCTCAAATAACAAGGCCACCAACTACTTCTTCTTCTCCAAAATCTTCTGTGAATAGTAATAATGGTATATTGGATTTCTCTTTCAACAATGTTGATTCCAAAAATCAAATCCTTGATCACAATTATTCATCTGAGTGTGCTAGCACAGCCACCAATGGGGGAGTGTGGAAGAAGGCTAGGGTTCAGTCGCCCTCCGGCCAGCCTCCGATAAAGGTGAGAAAGGAGAAGGTAGGGGATAGAATCACAGCTCTCCACCAGCTGGTTTCTCCATTTGGAAAGACTGACACTGCTTCTGTCTTGTCAGAGGCTATTGGGTATGTGAGATTCCTTCAGAGTCAGATTGAGGCTCTCATCTCTCCATATTTGGGCAATTCATCAAAATCCACAAAGAAAAAGGAGCAAATTAGAACATTAAATGATGGGAGAAATTTGAGAGAAGTTGAAGGTGAATTTCCTGAAGACACTGGTCAGGAGGAAGAAGCAAAGGACTTGAGGGGTAGAGGGCTTTGTTTAGTACCTGTATCTTGTACACAACATGTACAAAGTGACATTAATGGAGCTGATTATTGGGCTCAAGCTTACAATGGCACTTTCTAA

Protein sequence

MMGGNPTKPSQITRPPTTSSSPKSSVNSNNGILDFSFNNVDSKNQILDHNYSSECASTATNGGVWKKARVQSPSGQPPIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEALISPYLGNSSKSTKKKEQIRTLNDGRNLREVEGEFPEDTGQEEEAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNGTF

Homology

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BLAST of HG10002277 vs. NCBI nr
Match: XP_038895281.1 (transcription factor bHLH68-like isoform X1 [Benincasa hispida])

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-86
Identity = 181/222 (81.53%), Postives = 185/222 (83.33%), Query Frame = 0


Query: 13  TRPP-TTSSSPKSSVNSNNGILDFSFNNVDSKNQILDHNYSSECASTATNGGVWKKARVQ 72
           TRPP TT+SS KSSVNSNN ILDFSFN + SKNQILDHNYSSECASTAT GGVWKKARVQ
Sbjct: 141 TRPPTTTTSSSKSSVNSNNAILDFSFNKLHSKNQILDHNYSSECASTATTGGVWKKARVQ 200

Query: 73  SPSGQPPIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEALISPYL 132
             SGQPPIKVRKEKVGDRIT LHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEALISPYL
Sbjct: 201 PTSGQPPIKVRKEKVGDRITTLHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEALISPYL 260

Query: 133 GNSSKSTKKKEQIRTLNDGRN-LREVEGE-------FPEDTGQ----------------- 192
           GNSSKSTKKK+Q+RTLNDGRN LREVEGE       F ED GQ                 
Sbjct: 261 GNSSKSTKKKKQLRTLNDGRNYLREVEGENNGISCVFDEDPGQLLNDNSLKRKLAPSQEE 320

Query: 193 -EEEAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNGTF 208
            EEEAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNGTF
Sbjct: 321 EEEEAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNGTF 362

[Close]

BLAST of HG10002277 vs. NCBI nr
Match: XP_008447522.1 (PREDICTED: transcription factor bHLH68-like isoform X2 [Cucumis melo])

HSP 1 Score: 316.2 bits (809), Expect = 2.0e-82
Identity = 175/230 (76.09%), Postives = 184/230 (80.00%), Query Frame = 0


Query: 8   KPSQITRPPTTSSSPKSSVNSNNGILDFSFNNVDSKNQILDHNYSS-ECASTATNGGVWK 67
           K SQITRP T SSSP SS+N+NN +LDFSFN VDSKNQILDHN+SS +CAS  TNGGVWK
Sbjct: 153 KLSQITRPLTISSSPNSSINNNNALLDFSFNKVDSKNQILDHNFSSDQCASPTTNGGVWK 212

Query: 68  KARVQSPSGQPPIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL 127
           KARVQ  SGQPP+KVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL
Sbjct: 213 KARVQPSSGQPPVKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL 272

Query: 128 ISPYLGNSSKSTKKKEQIRTLNDGRN-LREVEGE-------FPEDTGQ------------ 187
           ISPYL NSSKSTKKKEQ+RTLNDGRN LREVE +       F ED GQ            
Sbjct: 273 ISPYLVNSSKSTKKKEQLRTLNDGRNYLREVEDDNNGRSCVFAEDLGQLLNDNSLKRKLP 332

Query: 188 ---------EEEAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNGTF 208
                    E+ AKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYN TF
Sbjct: 333 PSQEEDEEEEKAAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNHTF 382

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BLAST of HG10002277 vs. NCBI nr
Match: TYK08553.1 (transcription factor bHLH68-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 315.8 bits (808), Expect = 2.7e-82
Identity = 175/231 (75.76%), Postives = 184/231 (79.65%), Query Frame = 0


Query: 8   KPSQITRPPTTSSSPKSSVNSNNGILDFSFNNVDSKNQILDHNYSS-ECASTATNGGVWK 67
           K SQITRP T SSSP SS+N+NN +LDFSFN VDSKNQILDHN+SS +CAS  TNGGVWK
Sbjct: 152 KLSQITRPLTISSSPNSSINNNNALLDFSFNKVDSKNQILDHNFSSDQCASPTTNGGVWK 211

Query: 68  KARVQSPSGQPPIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL 127
           KARVQ  SGQPP+KVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL
Sbjct: 212 KARVQPSSGQPPVKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL 271

Query: 128 ISPYLGNSSKSTKKKEQIRTLNDGRN-LREVEGE-------FPEDTGQ------------ 187
           ISPYL NSSKSTKKKEQ+RTLNDGRN LREVE +       F ED GQ            
Sbjct: 272 ISPYLVNSSKSTKKKEQLRTLNDGRNYLREVEDDNNGRSCVFAEDLGQQLLNDNSLKRKL 331

Query: 188 ----------EEEAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNGTF 208
                     E+ AKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYN TF
Sbjct: 332 PPSQEEDEEEEKAAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNHTF 382

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BLAST of HG10002277 vs. NCBI nr
Match: XP_008447521.1 (PREDICTED: transcription factor bHLH68-like isoform X1 [Cucumis melo] >XP_016900380.1 PREDICTED: transcription factor bHLH68-like isoform X1 [Cucumis melo])

HSP 1 Score: 315.8 bits (808), Expect = 2.7e-82
Identity = 175/231 (75.76%), Postives = 184/231 (79.65%), Query Frame = 0


Query: 8   KPSQITRPPTTSSSPKSSVNSNNGILDFSFNNVDSKNQILDHNYSS-ECASTATNGGVWK 67
           K SQITRP T SSSP SS+N+NN +LDFSFN VDSKNQILDHN+SS +CAS  TNGGVWK
Sbjct: 153 KLSQITRPLTISSSPNSSINNNNALLDFSFNKVDSKNQILDHNFSSDQCASPTTNGGVWK 212

Query: 68  KARVQSPSGQPPIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL 127
           KARVQ  SGQPP+KVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL
Sbjct: 213 KARVQPSSGQPPVKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL 272

Query: 128 ISPYLGNSSKSTKKKEQIRTLNDGRN-LREVEGE-------FPEDTGQ------------ 187
           ISPYL NSSKSTKKKEQ+RTLNDGRN LREVE +       F ED GQ            
Sbjct: 273 ISPYLVNSSKSTKKKEQLRTLNDGRNYLREVEDDNNGRSCVFAEDLGQQLLNDNSLKRKL 332

Query: 188 ----------EEEAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNGTF 208
                     E+ AKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYN TF
Sbjct: 333 PPSQEEDEEEEKAAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNHTF 383

[Close]

BLAST of HG10002277 vs. NCBI nr
Match: XP_038895289.1 (transcription factor bHLH68-like isoform X2 [Benincasa hispida])

HSP 1 Score: 311.6 bits (797), Expect = 5.0e-81
Identity = 166/196 (84.69%), Postives = 173/196 (88.27%), Query Frame = 0


Query: 13  TRPP-TTSSSPKSSVNSNNGILDFSFNNVDSKNQILDHNYSSECASTATNGGVWKKARVQ 72
           TRPP TT+SS KSSVNSNN ILDFSFN + SKNQILDHNYSSECASTAT GGVWKKARVQ
Sbjct: 141 TRPPTTTTSSSKSSVNSNNAILDFSFNKLHSKNQILDHNYSSECASTATTGGVWKKARVQ 200

Query: 73  SPSGQPPIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEALISPYL 132
             SGQPPIKVRKEKVGDRIT LHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEALISPYL
Sbjct: 201 PTSGQPPIKVRKEKVGDRITTLHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEALISPYL 260

Query: 133 GNSSKSTKKKEQIRTLNDGRNLREVEGEFPEDTGQEEEAKDLRGRGLCLVPVSCTQHVQS 192
           GNSSKSTKKK+Q+  LND    R++    P    +EEEAKDLRGRGLCLVPVSCTQHVQS
Sbjct: 261 GNSSKSTKKKKQL-LLNDNSLKRKLA---PSQEEEEEEAKDLRGRGLCLVPVSCTQHVQS 320

Query: 193 DINGADYWAQAYNGTF 208
           DINGADYWAQAYNGTF
Sbjct: 321 DINGADYWAQAYNGTF 332

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BLAST of HG10002277 vs. ExPASy Swiss-Prot
Match: Q8S3D1 (Transcription factor bHLH68 OS=Arabidopsis thaliana OX=3702 GN=BHLH68 PE=1 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 5.9e-40
Identity = 111/230 (48.26%), Postives = 134/230 (58.26%), Query Frame = 0


Query: 5   NPTKPSQITRPPTTS-SSPKSSVNSNNGILDFSFNNVD---SKNQILDHNYSSECASTAT 64
           +P   S +T   TTS +S   ++N+NN +LDFS N+     S+ +    + SSEC S   
Sbjct: 183 SPPNKSCVTTTTTTSLNSNDDNINNNNNMLDFSSNHNGLHLSEGRHTPPDRSSECNSLEI 242

Query: 65  NGGVWKKARVQ-SPSGQPPIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFL 124
            G   KK R+Q SPS Q  +KVRKEK+G RI ALHQLVSPFGKTDTASVLSEAIGY+RFL
Sbjct: 243 GGSTNKKPRLQPSPSSQSTLKVRKEKLGGRIAALHQLVSPFGKTDTASVLSEAIGYIRFL 302

Query: 125 QSQIEALISPYLGNSSKSTKKKEQIRTLNDGRNLREVEGE----FPEDTGQ--------- 184
           QSQIEAL  PY G ++    + +Q            ++G+    FPED GQ         
Sbjct: 303 QSQIEALSHPYFGTTASGNMRHQQ-----------HLQGDRSCIFPEDPGQLVNDQCMKR 362

Query: 185 --------------EEEAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQA 203
                         EE  KDLR RGLCLVP+SCT  V SD NGADYWA A
Sbjct: 363 RGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSD-NGADYWAPA 400

[Close]

BLAST of HG10002277 vs. ExPASy Swiss-Prot
Match: Q7XHI5 (Transcription factor bHLH133 OS=Arabidopsis thaliana OX=3702 GN=BHLH133 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.8e-36
Identity = 101/213 (47.42%), Postives = 119/213 (55.87%), Query Frame = 0


Query: 20  SSPKSSVNSNNGILDFSFNNVDSKNQILDHNYSSECASTATNGGVW--KKARVQSPSGQP 79
           SSP S  N +   +     N D+ N I      SEC S+   G  +  KK ++Q PS Q 
Sbjct: 159 SSPNSPPNKSCATI--INTNEDNNNNIHSGLNLSECNSSEMIGSSFANKKPKLQVPSSQS 218

Query: 80  PIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEALISPYLGNSSKS 139
            +KVRKEK+G RI +LHQLVSPFGKTDTASVLSEAIGY+RFL SQIEAL  PY G  S++
Sbjct: 219 TLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPYFGTPSRN 278

Query: 140 TKKKEQIRTLNDGRNLREVEGEFPEDTGQ------------------------EEEAKDL 199
               +  +        R + G FPED GQ                        EE  KDL
Sbjct: 279 NMMHQHAQ--------RNMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEEPMKDL 338

Query: 200 RGRGLCLVPVSCTQHVQSDINGADYWAQAYNGT 207
           R RGLCLVP+SCT  V SD NGADYWA A+  T
Sbjct: 339 RSRGLCLVPISCTLQVGSD-NGADYWAPAFGTT 360

[Close]

BLAST of HG10002277 vs. ExPASy Swiss-Prot
Match: Q9SFZ3 (Transcription factor bHLH110 OS=Arabidopsis thaliana OX=3702 GN=BHLH110 PE=2 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 1.8e-28
Identity = 81/177 (45.76%), Postives = 97/177 (54.80%), Query Frame = 0


Query: 16  PTTSSSPKSSVNSNNGILDFSFNNVDSKNQILDHNYSSECASTATNGGVWKKARVQSPSG 75
           P  SSSP   +          F+N    ++   HN+     +T       KK RV+S S 
Sbjct: 279 PHLSSSPTHQME--------MFSNEPQTSEGKRHNF---LMATKAGENASKKPRVESRSS 338

Query: 76  QPPIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEALISPYLGNSS 135
            PP KVRKEK+GDRI AL QLVSPFGKTDTASVL EAIGY++FLQSQIE L  PY+  S 
Sbjct: 339 CPPFKVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASR 398

Query: 136 KSTKKKEQIRTLNDGRNLREVEGEFPEDTGQEEEAKDLRGRGLCLVPVSCTQHVQSD 193
               K  Q+ +                  G EEE +DLR RGLCLVP+SC  +V  D
Sbjct: 399 NRPGKASQLVS--------------QSQEGDEEETRDLRSRGLCLVPLSCMTYVTGD 430

[Close]

BLAST of HG10002277 vs. ExPASy Swiss-Prot
Match: Q9LT67 (Transcription factor bHLH113 OS=Arabidopsis thaliana OX=3702 GN=BHLH113 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.1e-25
Identity = 71/140 (50.71%), Postives = 84/140 (60.00%), Query Frame = 0


Query: 66  KKARVQSPSGQPPIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEA 125
           K  R Q  S     KVRKE++G+RI AL QLVSP+GKTD ASVL EA+GY++FLQ QI+ 
Sbjct: 140 KGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQDQIQV 199

Query: 126 LISPYLGNSSKSTKKKEQIRTLNDGRNLREVEGEFPEDTGQEEEAKDLRGRGLCLVPVSC 185
           L SPYL N S             DG       G    D     +AKDLR RGLCLVPVS 
Sbjct: 200 LCSPYLINHSL------------DG-------GVVTGDVMAAMKAKDLRSRGLCLVPVSS 259

Query: 186 TQHVQSDINGADYWAQAYNG 206
           T HV++  NGAD+W+ A  G
Sbjct: 260 TVHVENS-NGADFWSPATMG 259

[Close]

BLAST of HG10002277 vs. ExPASy Swiss-Prot
Match: Q94JL3 (Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.5e-23
Identity = 69/167 (41.32%), Postives = 94/167 (56.29%), Query Frame = 0


Query: 40  VDSKNQILDHNYSSECASTA-TNGGVWKKARVQSPSGQPPIKVRKEKVGDRITALHQLVS 99
           ++ K + L     SE    A  N    KK RV +PS  P  KVRKE + D+IT+L QLVS
Sbjct: 239 LEDKTKNLKTRAQSESLKRAKDNESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVS 298

Query: 100 PFGKTDTASVLSEAIGYVRFLQSQIEALISPYLGNSSKSTKKKEQIRTLNDGRNLREVEG 159
           PFGKTDTASVL EAI Y++FL  Q+  L +PY+     S ++++QI     G++  +   
Sbjct: 299 PFGKTDTASVLQEAIEYIKFLHDQVTVLSTPYM-KQGASNQQQQQI----SGKSKSQ--- 358

Query: 160 EFPEDTGQEEEAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNG 206
                   E E  +LRG GLCLVP+S T  V ++   AD+W   + G
Sbjct: 359 -------DENENHELRGHGLCLVPISSTFPVANETT-ADFWTPTFGG 389

[Close]

BLAST of HG10002277 vs. ExPASy TrEMBL
Match: A0A1S3BI90 (transcription factor bHLH68-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489950 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 9.9e-83
Identity = 175/230 (76.09%), Postives = 184/230 (80.00%), Query Frame = 0


Query: 8   KPSQITRPPTTSSSPKSSVNSNNGILDFSFNNVDSKNQILDHNYSS-ECASTATNGGVWK 67
           K SQITRP T SSSP SS+N+NN +LDFSFN VDSKNQILDHN+SS +CAS  TNGGVWK
Sbjct: 153 KLSQITRPLTISSSPNSSINNNNALLDFSFNKVDSKNQILDHNFSSDQCASPTTNGGVWK 212

Query: 68  KARVQSPSGQPPIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL 127
           KARVQ  SGQPP+KVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL
Sbjct: 213 KARVQPSSGQPPVKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL 272

Query: 128 ISPYLGNSSKSTKKKEQIRTLNDGRN-LREVEGE-------FPEDTGQ------------ 187
           ISPYL NSSKSTKKKEQ+RTLNDGRN LREVE +       F ED GQ            
Sbjct: 273 ISPYLVNSSKSTKKKEQLRTLNDGRNYLREVEDDNNGRSCVFAEDLGQLLNDNSLKRKLP 332

Query: 188 ---------EEEAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNGTF 208
                    E+ AKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYN TF
Sbjct: 333 PSQEEDEEEEKAAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNHTF 382

[Close]

BLAST of HG10002277 vs. ExPASy TrEMBL
Match: A0A1S4DXD6 (transcription factor bHLH68-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489950 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.3e-82
Identity = 175/231 (75.76%), Postives = 184/231 (79.65%), Query Frame = 0


Query: 8   KPSQITRPPTTSSSPKSSVNSNNGILDFSFNNVDSKNQILDHNYSS-ECASTATNGGVWK 67
           K SQITRP T SSSP SS+N+NN +LDFSFN VDSKNQILDHN+SS +CAS  TNGGVWK
Sbjct: 153 KLSQITRPLTISSSPNSSINNNNALLDFSFNKVDSKNQILDHNFSSDQCASPTTNGGVWK 212

Query: 68  KARVQSPSGQPPIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL 127
           KARVQ  SGQPP+KVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL
Sbjct: 213 KARVQPSSGQPPVKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL 272

Query: 128 ISPYLGNSSKSTKKKEQIRTLNDGRN-LREVEGE-------FPEDTGQ------------ 187
           ISPYL NSSKSTKKKEQ+RTLNDGRN LREVE +       F ED GQ            
Sbjct: 273 ISPYLVNSSKSTKKKEQLRTLNDGRNYLREVEDDNNGRSCVFAEDLGQQLLNDNSLKRKL 332

Query: 188 ----------EEEAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNGTF 208
                     E+ AKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYN TF
Sbjct: 333 PPSQEEDEEEEKAAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNHTF 383

[Close]

BLAST of HG10002277 vs. ExPASy TrEMBL
Match: A0A5D3C9J4 (Transcription factor bHLH68-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00950 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.3e-82
Identity = 175/231 (75.76%), Postives = 184/231 (79.65%), Query Frame = 0


Query: 8   KPSQITRPPTTSSSPKSSVNSNNGILDFSFNNVDSKNQILDHNYSS-ECASTATNGGVWK 67
           K SQITRP T SSSP SS+N+NN +LDFSFN VDSKNQILDHN+SS +CAS  TNGGVWK
Sbjct: 152 KLSQITRPLTISSSPNSSINNNNALLDFSFNKVDSKNQILDHNFSSDQCASPTTNGGVWK 211

Query: 68  KARVQSPSGQPPIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL 127
           KARVQ  SGQPP+KVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL
Sbjct: 212 KARVQPSSGQPPVKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL 271

Query: 128 ISPYLGNSSKSTKKKEQIRTLNDGRN-LREVEGE-------FPEDTGQ------------ 187
           ISPYL NSSKSTKKKEQ+RTLNDGRN LREVE +       F ED GQ            
Sbjct: 272 ISPYLVNSSKSTKKKEQLRTLNDGRNYLREVEDDNNGRSCVFAEDLGQQLLNDNSLKRKL 331

Query: 188 ----------EEEAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNGTF 208
                     E+ AKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYN TF
Sbjct: 332 PPSQEEDEEEEKAAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNHTF 382

[Close]

BLAST of HG10002277 vs. ExPASy TrEMBL
Match: A0A0A0L827 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G485860 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.3e-82
Identity = 174/228 (76.32%), Postives = 183/228 (80.26%), Query Frame = 0


Query: 8   KPSQITRPPTTSSSPKSSVNSNNGILDFSFNNVDSKNQILDHNYSS-ECASTATNGGVWK 67
           K SQ+TRP T SSSP SS+N+NN +LDFSFN VDSKNQILDH +SS +CAS  TNGGVWK
Sbjct: 148 KLSQMTRPLTISSSPNSSINNNNALLDFSFNKVDSKNQILDHKFSSDQCASPTTNGGVWK 207

Query: 68  KARVQSPSGQPPIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL 127
           KARVQ   GQPP KVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL
Sbjct: 208 KARVQPSFGQPPAKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEAL 267

Query: 128 ISPYLGNSSKSTKKKEQIRTLNDGRN-LREVEGE-------FPEDTGQ------------ 187
           ISPYLGNSSKSTKKKEQ+RTLNDGRN LREVE +       F ED GQ            
Sbjct: 268 ISPYLGNSSKSTKKKEQLRTLNDGRNYLREVEDDNNGRSCVFAEDLGQQLLNDNSLKRKL 327

Query: 188 -------EEEAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNGTF 208
                  EE+AKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYN TF
Sbjct: 328 PPSQEDEEEKAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNDTF 375

[Close]

BLAST of HG10002277 vs. ExPASy TrEMBL
Match: A0A6J1DJE0 (transcription factor bHLH68-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021027 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.3e-74
Identity = 168/233 (72.10%), Postives = 175/233 (75.11%), Query Frame = 0


Query: 1   MMGGNPTKPSQITRPPTTSSSPKSSVNS---NNGILDFSFNNVDSKNQILDHNYSSECAS 60
           +   N    S       +SSS  +SVNS   +N ILDFSF+ VDSKNQI DHNYSSECAS
Sbjct: 139 LWNNNEESSSSSPAAAASSSSNSNSVNSCLTSNAILDFSFHKVDSKNQIPDHNYSSECAS 198

Query: 61  T-ATNGGVWKKARVQSPSGQPPIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYV 120
           T AT GGV KKARVQ  SGQPP+KVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYV
Sbjct: 199 TAATGGGVCKKARVQPTSGQPPMKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYV 258

Query: 121 RFLQSQIEALISPYLGNSSKSTKKKEQIRTLNDGRNLREVEGE------FPEDTGQ---- 180
           RFLQSQIEALISPYLGNSSK T KKEQ RTLNDGRNLREVEGE      FPED GQ    
Sbjct: 259 RFLQSQIEALISPYLGNSSKPT-KKEQFRTLNDGRNLREVEGERGRSCVFPEDPGQLLND 318

Query: 181 ------------EEEAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQAYNGTF 208
                        E  KDLR RGLCLVPVSCTQ VQSDINGADYWAQAYNG+F
Sbjct: 319 NSLKRKLPPHQENEGGKDLRSRGLCLVPVSCTQLVQSDINGADYWAQAYNGSF 370

[Close]

BLAST of HG10002277 vs. TAIR 10
Match: AT4G29100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 165.6 bits (418), Expect = 4.2e-41
Identity = 111/230 (48.26%), Postives = 134/230 (58.26%), Query Frame = 0


Query: 5   NPTKPSQITRPPTTS-SSPKSSVNSNNGILDFSFNNVD---SKNQILDHNYSSECASTAT 64
           +P   S +T   TTS +S   ++N+NN +LDFS N+     S+ +    + SSEC S   
Sbjct: 183 SPPNKSCVTTTTTTSLNSNDDNINNNNNMLDFSSNHNGLHLSEGRHTPPDRSSECNSLEI 242

Query: 65  NGGVWKKARVQ-SPSGQPPIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFL 124
            G   KK R+Q SPS Q  +KVRKEK+G RI ALHQLVSPFGKTDTASVLSEAIGY+RFL
Sbjct: 243 GGSTNKKPRLQPSPSSQSTLKVRKEKLGGRIAALHQLVSPFGKTDTASVLSEAIGYIRFL 302

Query: 125 QSQIEALISPYLGNSSKSTKKKEQIRTLNDGRNLREVEGE----FPEDTGQ--------- 184
           QSQIEAL  PY G ++    + +Q            ++G+    FPED GQ         
Sbjct: 303 QSQIEALSHPYFGTTASGNMRHQQ-----------HLQGDRSCIFPEDPGQLVNDQCMKR 362

Query: 185 --------------EEEAKDLRGRGLCLVPVSCTQHVQSDINGADYWAQA 203
                         EE  KDLR RGLCLVP+SCT  V SD NGADYWA A
Sbjct: 363 RGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSD-NGADYWAPA 400

[Close]

BLAST of HG10002277 vs. TAIR 10
Match: AT2G20100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-37
Identity = 101/213 (47.42%), Postives = 119/213 (55.87%), Query Frame = 0


Query: 20  SSPKSSVNSNNGILDFSFNNVDSKNQILDHNYSSECASTATNGGVW--KKARVQSPSGQP 79
           SSP S  N +   +     N D+ N I      SEC S+   G  +  KK ++Q PS Q 
Sbjct: 159 SSPNSPPNKSCATI--INTNEDNNNNIHSGLNLSECNSSEMIGSSFANKKPKLQVPSSQS 218

Query: 80  PIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEALISPYLGNSSKS 139
            +KVRKEK+G RI +LHQLVSPFGKTDTASVLSEAIGY+RFL SQIEAL  PY G  S++
Sbjct: 219 TLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPYFGTPSRN 278

Query: 140 TKKKEQIRTLNDGRNLREVEGEFPEDTGQ------------------------EEEAKDL 199
               +  +        R + G FPED GQ                        EE  KDL
Sbjct: 279 NMMHQHAQ--------RNMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEEPMKDL 338

Query: 200 RGRGLCLVPVSCTQHVQSDINGADYWAQAYNGT 207
           R RGLCLVP+SCT  V SD NGADYWA A+  T
Sbjct: 339 RSRGLCLVPISCTLQVGSD-NGADYWAPAFGTT 360

[Close]

BLAST of HG10002277 vs. TAIR 10
Match: AT1G27660.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-29
Identity = 81/177 (45.76%), Postives = 97/177 (54.80%), Query Frame = 0


Query: 16  PTTSSSPKSSVNSNNGILDFSFNNVDSKNQILDHNYSSECASTATNGGVWKKARVQSPSG 75
           P  SSSP   +          F+N    ++   HN+     +T       KK RV+S S 
Sbjct: 279 PHLSSSPTHQME--------MFSNEPQTSEGKRHNF---LMATKAGENASKKPRVESRSS 338

Query: 76  QPPIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEALISPYLGNSS 135
            PP KVRKEK+GDRI AL QLVSPFGKTDTASVL EAIGY++FLQSQIE L  PY+  S 
Sbjct: 339 CPPFKVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASR 398

Query: 136 KSTKKKEQIRTLNDGRNLREVEGEFPEDTGQEEEAKDLRGRGLCLVPVSCTQHVQSD 193
               K  Q+ +                  G EEE +DLR RGLCLVP+SC  +V  D
Sbjct: 399 NRPGKASQLVS--------------QSQEGDEEETRDLRSRGLCLVPLSCMTYVTGD 430

[Close]

BLAST of HG10002277 vs. TAIR 10
Match: AT3G19500.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 2.9e-26
Identity = 71/140 (50.71%), Postives = 84/140 (60.00%), Query Frame = 0


Query: 66  KKARVQSPSGQPPIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEA 125
           K  R Q  S     KVRKE++G+RI AL QLVSP+GKTD ASVL EA+GY++FLQ QI+ 
Sbjct: 140 KGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQDQIQV 199

Query: 126 LISPYLGNSSKSTKKKEQIRTLNDGRNLREVEGEFPEDTGQEEEAKDLRGRGLCLVPVSC 185
           L SPYL N S             DG       G    D     +AKDLR RGLCLVPVS 
Sbjct: 200 LCSPYLINHSL------------DG-------GVVTGDVMAAMKAKDLRSRGLCLVPVSS 259

Query: 186 TQHVQSDINGADYWAQAYNG 206
           T HV++  NGAD+W+ A  G
Sbjct: 260 TVHVENS-NGADFWSPATMG 259

[Close]

BLAST of HG10002277 vs. TAIR 10
Match: AT2G20100.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 2.5e-25
Identity = 73/149 (48.99%), Postives = 89/149 (59.73%), Query Frame = 0


Query: 20  SSPKSSVNSNNGILDFSFNNVDSKNQILDHNYSSECASTATNGGVW--KKARVQSPSGQP 79
           SSP S  N +   +     N D+ N I      SEC S+   G  +  KK ++Q PS Q 
Sbjct: 159 SSPNSPPNKSCATI--INTNEDNNNNIHSGLNLSECNSSEMIGSSFANKKPKLQVPSSQS 218

Query: 80  PIKVRKEKVGDRITALHQLVSPFGKTDTASVLSEAIGYVRFLQSQIEALISPYLGNSSKS 139
            +KVRKEK+G RI +LHQLVSPFGKTDTASVLSEAIGY+RFL SQIEAL  PY G  S++
Sbjct: 219 TLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPYFGTPSRN 278

Query: 140 TKKKEQIRTLNDGRNLREVEGEFPEDTGQ 167
               +  +        R + G FPED GQ
Sbjct: 279 NMMHQHAQ--------RNMNGIFPEDPGQ 297

The following BLAST results are available for this feature:

BLAST of HG10002277 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895281.1	1.0e-86	81.53	transcription factor bHLH68-like isoform X1 [Benincasa hispida]	[more]
XP_008447522.1	2.0e-82	76.09	PREDICTED: transcription factor bHLH68-like isoform X2 [Cucumis melo]	[more]
TYK08553.1	2.7e-82	75.76	transcription factor bHLH68-like isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008447521.1	2.7e-82	75.76	PREDICTED: transcription factor bHLH68-like isoform X1 [Cucumis melo] >XP_016900...	[more]
XP_038895289.1	5.0e-81	84.69	transcription factor bHLH68-like isoform X2 [Benincasa hispida]	[more]

BLAST of HG10002277 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S3D1	5.9e-40	48.26	Transcription factor bHLH68 OS=Arabidopsis thaliana OX=3702 GN=BHLH68 PE=1 SV=2	[more]
Q7XHI5	1.8e-36	47.42	Transcription factor bHLH133 OS=Arabidopsis thaliana OX=3702 GN=BHLH133 PE=1 SV=...	[more]
Q9SFZ3	1.8e-28	45.76	Transcription factor bHLH110 OS=Arabidopsis thaliana OX=3702 GN=BHLH110 PE=2 SV=...	[more]
Q9LT67	4.1e-25	50.71	Transcription factor bHLH113 OS=Arabidopsis thaliana OX=3702 GN=BHLH113 PE=2 SV=...	[more]
Q94JL3	8.5e-23	41.32	Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=...	[more]

BLAST of HG10002277 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BI90	9.9e-83	76.09	transcription factor bHLH68-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489...	[more]
A0A1S4DXD6	1.3e-82	75.76	transcription factor bHLH68-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489...	[more]
A0A5D3C9J4	1.3e-82	75.76	Transcription factor bHLH68-like isoform X1 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0L827	1.3e-82	76.32	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G485860 PE=4 S...	[more]
A0A6J1DJE0	1.3e-74	72.10	transcription factor bHLH68-like isoform X2 OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of HG10002277 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29100.1	4.2e-41	48.26	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G20100.1	1.3e-37	47.42	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G27660.1	1.3e-29	45.76	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G19500.1	2.9e-26	50.71	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G20100.2	2.5e-25	48.99	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 80..147 e-value: 2.3E-6 score: 29.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 80..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR16223:SF181	TRANSCRIPTION FACTOR BHLH68	coord: 19..193
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 19..193
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 77..126 e-value: 2.88728E-22 score: 83.3847
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 70..119 score: 10.486531

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002277.1	HG10002277.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity