HG10002160 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002160
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Expansin-like EG45 domain-containing protein
Location	Chr11: 4021373 .. 4022932 (-)
RNA-Seq Expression	HG10002160
Synteny	HG10002160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCAGTAGTAATGAAGTTTGTGGTGGTAATGGTGAGTTTGGTGTTGACACTTTCTTATGCTCATGCAGATACAGGCACTGCAACTTTTTATACGCCTCCTTATGTTCGTGAGTACATCAATTTATTCTCTCTTTTTTTCTTTGATTTATCCAATTTATATAATTCGGGATTTATTTTTAATTATAAATCTTAAATTTTGAAATTCTTCCGAAACAAATCTGTCTGGAGTTAACTTGTTAAATATGACGGGGTGTTTGACCCAAGGAGTGAAAATTCGGAGTGAGTGGAAGCTGTGAATGTGAACTATACTCTTTGTTTGATCCAAGGTTGTTTGTGGGTTTCACGACTAAAAAACTCCATAACTCTCTCGACTTTACAACTTCACTCTTTGTCCCAAATATGTCTTTCTTAATGTGTGTGTAAAAACAAAAAGTTTGTATGTGATGTGAAAATCGTAGTAAGTTGGAATTAGGAAGTAGGAAGGATCCTTTGGTAATTTATGTGAGCCCCTAATTCATAAATACTAAGACGTTTAAATCTATTCAATTTCAATCTTCAAGGAATGATTAGATAAAGATTATTTTAGGACCAATTTGATTTTTTTTTAGTTTTTTAGAATTAAAATTATAAATATTATTTCTATACCTATAAGTTTTTTTTGGTTATGTTATCCATTTAAAATATCAAGCCAAATTCTGAAAACTTTAAAAAAAGAAAAAAAAAATCTTGGCTTGATATTTTTATAAATATTATTTCTATACTTATAAGTTTTCAAATTTTACTTTTGTTTTAAAATTTTATTAAGAATTCAAGTGTTTCTTAAAAAAAAAAAAAAAAAAAAAAATTACAAAATAGCGTCGTACACTCTAAAGAGTGTTTAGAGGAGTATTGAAAAACGTGAGTAATCGAAGACAAAACGAAAATGAGATTGCAAGGCATGAAACCGATAAGAAAGATAGTTGGATTAAAAACTGTCGGAACCGAAATGAGTTTTATATTACAAATCATACCCAAAATGCTCGATCCAAACATGAATTTTAGATTACATTCTCATCTCATGCATCTTTCTCATCGTTCTCACATTTAACGATCTCATTTTTGTTCCGTCCTCAATTCCACACACATTCCAACACTACTATGATTTTTAAGAATCCTGATTACATTTTAGTTTTCCAAACAGTCACTACGTTGCATTGCACGTGATTTCTAACTAGTATAGTAAGTGTGACAAACATTCACCACTCAATTTCAACTATATATATGTATTGTAGCTTCGGCATGCTTTGGGTACGATGACCAAGGGACAATGATAGCAGCAGCAAGCGTGGGGTTATTTAACAATGGAGCAGCGTGTGGGACAATGTATAGTGTGACATGCACTGGCCCAACGAACTTGGGTGTTCCACAGCCATGCACAGGCAACTCTGTTACTGTTAAGGTTGTTGATCTCTGCCCATCTCCTGGTTGCCAAGCCACCATTGATCTCTCTCAAGAAGCTTTCGCAATTATTGCTAACCCTGATGCTGGAAAAATCAACATTGAATTTACTCAGTAA

mRNA sequence

ATGGAAGCAGTAGTAATGAAGTTTGTGGTGGTAATGGTGAGTTTGGTGTTGACACTTTCTTATGCTCATGCAGATACAGGCACTGCAACTTTTTATACGCCTCCTTATGTTCCTTCGGCATGCTTTGGGTACGATGACCAAGGGACAATGATAGCAGCAGCAAGCGTGGGGTTATTTAACAATGGAGCAGCGTGTGGGACAATGTATAGTGTGACATGCACTGGCCCAACGAACTTGGGTGTTCCACAGCCATGCACAGGCAACTCTGTTACTGTTAAGGTTGTTGATCTCTGCCCATCTCCTGGTTGCCAAGCCACCATTGATCTCTCTCAAGAAGCTTTCGCAATTATTGCTAACCCTGATGCTGGAAAAATCAACATTGAATTTACTCAGTAA

Coding sequence (CDS)

ATGGAAGCAGTAGTAATGAAGTTTGTGGTGGTAATGGTGAGTTTGGTGTTGACACTTTCTTATGCTCATGCAGATACAGGCACTGCAACTTTTTATACGCCTCCTTATGTTCCTTCGGCATGCTTTGGGTACGATGACCAAGGGACAATGATAGCAGCAGCAAGCGTGGGGTTATTTAACAATGGAGCAGCGTGTGGGACAATGTATAGTGTGACATGCACTGGCCCAACGAACTTGGGTGTTCCACAGCCATGCACAGGCAACTCTGTTACTGTTAAGGTTGTTGATCTCTGCCCATCTCCTGGTTGCCAAGCCACCATTGATCTCTCTCAAGAAGCTTTCGCAATTATTGCTAACCCTGATGCTGGAAAAATCAACATTGAATTTACTCAGTAA

Protein sequence

MEAVVMKFVVVMVSLVLTLSYAHADTGTATFYTPPYVPSACFGYDDQGTMIAAASVGLFNNGAACGTMYSVTCTGPTNLGVPQPCTGNSVTVKVVDLCPSPGCQATIDLSQEAFAIIANPDAGKINIEFTQ

Homology

[Close]

BLAST of HG10002160 vs. NCBI nr
Match: XP_038876066.1 (EG45-like domain containing protein [Benincasa hispida])

HSP 1 Score: 231.5 bits (589), Expect = 4.2e-57
Identity = 112/127 (88.19%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 5   VMKFVVVMVSLVLTLSYAHADTGTATFYTPPYVPSACFGYDDQGTMIAAASVGLFNNGAA 64
           +MKF+VV+VSLVLTLSY HA+TGTATFYTPPYVPSACFG+DD+GTMIAAAS G++NNG  
Sbjct: 1   MMKFMVVVVSLVLTLSYVHAETGTATFYTPPYVPSACFGFDDEGTMIAAASDGIYNNGEV 60

Query: 65  CGTMYSVTCTGPTNLGVPQPCTGNSVTVKVVDLCPSPGCQATIDLSQEAFAIIANPDAGK 124
           CG MYSVTCTGPTNLGVPQPCTGNSVTVKVVD CPSPGCQATIDLSQEAFAIIA+PDAGK
Sbjct: 61  CGRMYSVTCTGPTNLGVPQPCTGNSVTVKVVDRCPSPGCQATIDLSQEAFAIIADPDAGK 120

Query: 125 INIEFTQ 132
           INIEFTQ
Sbjct: 121 INIEFTQ 127

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BLAST of HG10002160 vs. NCBI nr
Match: XP_023540582.1 (EG45-like domain containing protein isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227.6 bits (579), Expect = 6.1e-56
Identity = 110/131 (83.97%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MEAVVMKFVVVMVSLVLTLSYAHADTGTATFYTPPYVPSACFGYDDQGTMIAAASVGLFN 60
           MEA  MK V + VSLVL L+YAHADTGTATFYTPPYVPSACFG+++QGT+IAAAS G++N
Sbjct: 1   MEAAAMKVVALAVSLVLILTYAHADTGTATFYTPPYVPSACFGFEEQGTLIAAASEGIYN 60

Query: 61  NGAACGTMYSVTCTGPTNLGVPQPCTGNSVTVKVVDLCPSPGCQATIDLSQEAFAIIANP 120
           NGAACG MY VTCTGPTNLGVPQPCTGN+VTVKVVDLCPSPGCQATIDLSQEAF+ IANP
Sbjct: 61  NGAACGRMYRVTCTGPTNLGVPQPCTGNTVTVKVVDLCPSPGCQATIDLSQEAFSSIANP 120

Query: 121 DAGKINIEFTQ 132
           DAGKINIEFT+
Sbjct: 121 DAGKINIEFTE 131

[Close]

BLAST of HG10002160 vs. NCBI nr
Match: XP_023540583.1 (EG45-like domain containing protein isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227.6 bits (579), Expect = 6.1e-56
Identity = 110/131 (83.97%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MEAVVMKFVVVMVSLVLTLSYAHADTGTATFYTPPYVPSACFGYDDQGTMIAAASVGLFN 60
           MEA  MK V + VSLVL L+YAHADTGTATFYTPPYVPSACFG+++QGT+IAAAS G++N
Sbjct: 1   MEAAAMKVVALAVSLVLILTYAHADTGTATFYTPPYVPSACFGFEEQGTLIAAASEGIYN 60

Query: 61  NGAACGTMYSVTCTGPTNLGVPQPCTGNSVTVKVVDLCPSPGCQATIDLSQEAFAIIANP 120
           NGAACG MY VTCTGPTNLGVPQPCTGN+VTVKVVDLCPSPGCQATIDLSQEAF+ IANP
Sbjct: 61  NGAACGRMYRVTCTGPTNLGVPQPCTGNTVTVKVVDLCPSPGCQATIDLSQEAFSSIANP 120

Query: 121 DAGKINIEFTQ 132
           DAGKINIEFT+
Sbjct: 121 DAGKINIEFTE 131

[Close]

BLAST of HG10002160 vs. NCBI nr
Match: KAG7029146.1 (EG45-like domain containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 227.3 bits (578), Expect = 7.9e-56
Identity = 110/131 (83.97%), Postives = 120/131 (91.60%), Query Frame = 0


Query: 1   MEAVVMKFVVVMVSLVLTLSYAHADTGTATFYTPPYVPSACFGYDDQGTMIAAASVGLFN 60
           MEA  MK V + VSLVL L+YAHADTGTATFYTPPYVPSACFG+++QGTMIAAAS G++N
Sbjct: 1   MEAAAMKVVALAVSLVLILTYAHADTGTATFYTPPYVPSACFGFEEQGTMIAAASEGIYN 60

Query: 61  NGAACGTMYSVTCTGPTNLGVPQPCTGNSVTVKVVDLCPSPGCQATIDLSQEAFAIIANP 120
           NGAACG MY VTCTGPTNLGVPQPCTGN+VTVKVVDLCPSPGCQATIDLS EAF+ IANP
Sbjct: 61  NGAACGRMYRVTCTGPTNLGVPQPCTGNTVTVKVVDLCPSPGCQATIDLSHEAFSTIANP 120

Query: 121 DAGKINIEFTQ 132
           DAGKINIEFT+
Sbjct: 121 DAGKINIEFTE 131

[Close]

BLAST of HG10002160 vs. NCBI nr
Match: KAG6597700.1 (EG45-like domain containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 226.1 bits (575), Expect = 1.8e-55
Identity = 109/131 (83.21%), Postives = 120/131 (91.60%), Query Frame = 0


Query: 1   MEAVVMKFVVVMVSLVLTLSYAHADTGTATFYTPPYVPSACFGYDDQGTMIAAASVGLFN 60
           MEA  MK V + VSLVL L+YAHADTGTATFYTPPYVPSACFG+++QGT+IAAAS G++N
Sbjct: 1   MEAAAMKVVALAVSLVLILTYAHADTGTATFYTPPYVPSACFGFEEQGTLIAAASEGIYN 60

Query: 61  NGAACGTMYSVTCTGPTNLGVPQPCTGNSVTVKVVDLCPSPGCQATIDLSQEAFAIIANP 120
           NGAACG MY VTCTGPTNLGVPQPCTGN+VTVKVVDLCPSPGCQATIDLS EAF+ IANP
Sbjct: 61  NGAACGRMYRVTCTGPTNLGVPQPCTGNTVTVKVVDLCPSPGCQATIDLSHEAFSTIANP 120

Query: 121 DAGKINIEFTQ 132
           DAGKINIEFT+
Sbjct: 121 DAGKINIEFTE 131

[Close]

BLAST of HG10002160 vs. ExPASy Swiss-Prot
Match: Q9ZP41 (EG45-like domain containing protein OS=Citrus jambhiri OX=64884 GN=CjBAp12 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 4.5e-38
Identity = 80/123 (65.04%), Postives = 92/123 (74.80%), Query Frame = 0


Query: 9   VVVMVSLVLTLSYAHADTGTATFYTPPYVPSACFGYDDQGTMIAAASVGLFNNGAACGTM 68
           V+  +++ L  S A+A  GTATFYTPPYVPSAC GY + G MIAAAS  ++NNGA C   
Sbjct: 9   VITTMAICLISSAAYASEGTATFYTPPYVPSACNGYKNDGVMIAAASYAIWNNGAVCNKS 68

Query: 69  YSVTCTGPTNLGVPQPCTGNSVTVKVVDLCPSPGCQATIDLSQEAFAIIANPDAGKINIE 128
           + V CTG TN G P PC G SV VK+VDLCP+ GCQATIDLSQEAF+ IANPDAGKI IE
Sbjct: 69  FRVKCTGATNQGTPHPCRGGSVLVKIVDLCPA-GCQATIDLSQEAFSQIANPDAGKIKIE 128

Query: 129 FTQ 132
           F Q
Sbjct: 129 FNQ 130

[Close]

BLAST of HG10002160 vs. ExPASy Swiss-Prot
Match: Q9M0C2 (Putative EG45-like domain containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=EGC1 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.6e-25
Identity = 65/115 (56.52%), Postives = 81/115 (70.43%), Query Frame = 0


Query: 15  LVLTLSYAHADTGTATFYTPPYVPSACFGYDDQGTMIAAASVGLFNNGAACGTMYSVTCT 74
           LV   S+++A  G ATFYT  Y P  C+    +G MIAAAS  L++NG  CG M++V C+
Sbjct: 12  LVFLFSFSYATPGIATFYT-SYTP--CYRGTQEGVMIAAASDTLWDNGRVCGKMFTVKCS 71

Query: 75  GPTNLGVPQPCTGNSVTVKVVDLCPSPGCQATIDLSQEAFAIIANPDAGKINIEF 130
           GP N  VP PCTG SV VK+VD CPS GC +T+DLS+EAFA IANP AG INI++
Sbjct: 72  GPRN-AVPHPCTGKSVKVKIVDHCPS-GCASTLDLSREAFAQIANPVAGIINIDY 121

[Close]

BLAST of HG10002160 vs. ExPASy Swiss-Prot
Match: Q9ZV52 (EG45-like domain containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=EGC2 PE=2 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-18
Identity = 56/131 (42.75%), Postives = 75/131 (57.25%), Query Frame = 0


Query: 1   MEAVVMKFVVVMVSLVLTLS-YAHADTGTATFYTPPYVPSACFGYDDQGTMIAAASVGLF 60
           M  + +KFVVVM+     L+  A A  G A +Y PPY  SAC+G   + T++      L+
Sbjct: 1   MIKMAVKFVVVMIVFAQILAPIAEAAQGKAVYYDPPYTRSACYG-TQRETLVVGVKNNLW 60

Query: 61  NNGAACGTMYSVTCTGPTNLGVPQPCTGNSVTVKVVDLCPSPGCQATIDLSQEAFAIIAN 120
            NG ACG  Y V C G T     + CTG +V VKVVD C  P C   ++LS++AF +IAN
Sbjct: 61  QNGRACGRRYRVRCIGAT-YNFDRACTGRTVDVKVVDFCREP-CNGDLNLSRDAFRVIAN 120

Query: 121 PDAGKINIEFT 131
            DAG I + +T
Sbjct: 121 TDAGNIRVVYT 128

[Close]

BLAST of HG10002160 vs. ExPASy Swiss-Prot
Match: Q6H677 (Putative expansin-B14 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB14 PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.7e-05
Identity = 50/162 (30.86%), Postives = 72/162 (44.44%), Query Frame = 0


Query: 1   MEAVVMKFVVVMVSL---VLTLSYAHAD---------TGTATFYTPPYVP----SACFGY 60
           + A ++  +V  V+L   VL  S A  D          G AT+Y P         AC   
Sbjct: 3   LAAKLLPSIVAFVALACCVLRSSVASVDHHRKLSGWSIGGATWYGPANGSGTDGGACGYQ 62

Query: 61  DDQG-----TMIAAASVGLFNNGAACGTMYSVTCTGPTNLGVPQPCTGNSVTVKVVDLCP 120
            D G     +MIAA S  ++ +G  CG+ Y V C+G  +      C+G  VTV + DLCP
Sbjct: 63  GDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPS------CSGKPVTVVLTDLCP 122

Query: 121 SPGC---QATIDLSQEAFAIIANP-------DAGKINIEFTQ 132
              C       DLS  AF  +A P       +AGK+ +++ +
Sbjct: 123 GGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYAR 158

[Close]

BLAST of HG10002160 vs. ExPASy Swiss-Prot
Match: Q7G6Z2 (Expansin-A12 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.3e-04
Identity = 35/87 (40.23%), Postives = 43/87 (49.43%), Query Frame = 0


Query: 22  AHADTGTATFY----TPPYVPSACFGYDD-----QGTMIAAASVGLFNNGAACGTMYSVT 81
           A A +GTATFY        +  AC GY +      GT  AA S  LFN+GAACG  Y +T
Sbjct: 22  AAALSGTATFYGGSDASGTMGGAC-GYGNLYSTGYGTNTAALSSALFNDGAACGECYQIT 81

Query: 82  CTGPTNLGVPQPCTGNSVTVKVVDLCP 100
           C    +        G SVT+   +LCP
Sbjct: 82  CDQSNSKWCK---AGTSVTITATNLCP 104

[Close]

BLAST of HG10002160 vs. ExPASy TrEMBL
Match: A0A6J1IAQ6 (EG45-like domain containing protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470786 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.5e-55
Identity = 110/131 (83.97%), Postives = 120/131 (91.60%), Query Frame = 0


Query: 1   MEAVVMKFVVVMVSLVLTLSYAHADTGTATFYTPPYVPSACFGYDDQGTMIAAASVGLFN 60
           MEA  MK V + VSLVL L+YAHADTGTATFYTPPYVPSACFG ++QGTMIAAAS G++N
Sbjct: 1   MEAAAMKVVSLAVSLVLILTYAHADTGTATFYTPPYVPSACFGLEEQGTMIAAASEGIYN 60

Query: 61  NGAACGTMYSVTCTGPTNLGVPQPCTGNSVTVKVVDLCPSPGCQATIDLSQEAFAIIANP 120
           NGA+CG MY VTCTGPTNLGVPQPCTGN+VTVKVVDLCPSPGCQATIDLSQEAF+ IANP
Sbjct: 61  NGASCGRMYRVTCTGPTNLGVPQPCTGNTVTVKVVDLCPSPGCQATIDLSQEAFSSIANP 120

Query: 121 DAGKINIEFTQ 132
           DAGKINIEFT+
Sbjct: 121 DAGKINIEFTE 131

[Close]

BLAST of HG10002160 vs. ExPASy TrEMBL
Match: A0A6J1I939 (EG45-like domain containing protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470786 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.5e-55
Identity = 110/131 (83.97%), Postives = 120/131 (91.60%), Query Frame = 0


Query: 1   MEAVVMKFVVVMVSLVLTLSYAHADTGTATFYTPPYVPSACFGYDDQGTMIAAASVGLFN 60
           MEA  MK V + VSLVL L+YAHADTGTATFYTPPYVPSACFG ++QGTMIAAAS G++N
Sbjct: 1   MEAAAMKVVSLAVSLVLILTYAHADTGTATFYTPPYVPSACFGLEEQGTMIAAASEGIYN 60

Query: 61  NGAACGTMYSVTCTGPTNLGVPQPCTGNSVTVKVVDLCPSPGCQATIDLSQEAFAIIANP 120
           NGA+CG MY VTCTGPTNLGVPQPCTGN+VTVKVVDLCPSPGCQATIDLSQEAF+ IANP
Sbjct: 61  NGASCGRMYRVTCTGPTNLGVPQPCTGNTVTVKVVDLCPSPGCQATIDLSQEAFSSIANP 120

Query: 121 DAGKINIEFTQ 132
           DAGKINIEFT+
Sbjct: 121 DAGKINIEFTE 131

[Close]

BLAST of HG10002160 vs. ExPASy TrEMBL
Match: A0A6J1F2X9 (EG45-like domain containing protein isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439189 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.9e-55
Identity = 109/131 (83.21%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MEAVVMKFVVVMVSLVLTLSYAHADTGTATFYTPPYVPSACFGYDDQGTMIAAASVGLFN 60
           MEA  MK V + VSLVL L+YAHADTGTATFYTPPYVPSAC+G+++QGTMIAAAS G++N
Sbjct: 1   MEAAAMKVVGLAVSLVLILAYAHADTGTATFYTPPYVPSACYGFEEQGTMIAAASEGIYN 60

Query: 61  NGAACGTMYSVTCTGPTNLGVPQPCTGNSVTVKVVDLCPSPGCQATIDLSQEAFAIIANP 120
           NGAACG MY VTCTGPTNLGVPQPCTGN+VTVKVVDLCPSPGCQATIDLS+EAF+ IANP
Sbjct: 61  NGAACGRMYRVTCTGPTNLGVPQPCTGNTVTVKVVDLCPSPGCQATIDLSREAFSSIANP 120

Query: 121 DAGKINIEFTQ 132
           DAGKINIEFT+
Sbjct: 121 DAGKINIEFTE 131

[Close]

BLAST of HG10002160 vs. ExPASy TrEMBL
Match: A0A6J1EXU1 (EG45-like domain containing protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439189 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.9e-55
Identity = 109/131 (83.21%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MEAVVMKFVVVMVSLVLTLSYAHADTGTATFYTPPYVPSACFGYDDQGTMIAAASVGLFN 60
           MEA  MK V + VSLVL L+YAHADTGTATFYTPPYVPSAC+G+++QGTMIAAAS G++N
Sbjct: 1   MEAAAMKVVGLAVSLVLILAYAHADTGTATFYTPPYVPSACYGFEEQGTMIAAASEGIYN 60

Query: 61  NGAACGTMYSVTCTGPTNLGVPQPCTGNSVTVKVVDLCPSPGCQATIDLSQEAFAIIANP 120
           NGAACG MY VTCTGPTNLGVPQPCTGN+VTVKVVDLCPSPGCQATIDLS+EAF+ IANP
Sbjct: 61  NGAACGRMYRVTCTGPTNLGVPQPCTGNTVTVKVVDLCPSPGCQATIDLSREAFSSIANP 120

Query: 121 DAGKINIEFTQ 132
           DAGKINIEFT+
Sbjct: 121 DAGKINIEFTE 131

[Close]

BLAST of HG10002160 vs. ExPASy TrEMBL
Match: A0A0A0KX23 (Expansin-like EG45 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G007620 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.7e-54
Identity = 108/131 (82.44%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MEAVVMKFVVVMVSLVLTLSYAHADTGTATFYTPPYVPSACFGYDDQGTMIAAASVGLFN 60
           MEA +MK VVV+VSL L LSYAHA+TGTAT+YTPPYVPSAC+G++DQGTMIAAAS GL+N
Sbjct: 1   MEA-LMKVVVVVVSLALALSYAHAETGTATYYTPPYVPSACYGFEDQGTMIAAASDGLYN 60

Query: 61  NGAACGTMYSVTCTGPTNLGVPQPCTGNSVTVKVVDLCPSPGCQATIDLSQEAFAIIANP 120
           NG ACG MY+VTCTGPTNLGV QPCTGNSVTVKVVD CPSPGCQ TIDLSQEAF++IANP
Sbjct: 61  NGEACGRMYTVTCTGPTNLGVQQPCTGNSVTVKVVDRCPSPGCQGTIDLSQEAFSMIANP 120

Query: 121 DAGKINIEFTQ 132
           DAGK+NI+FTQ
Sbjct: 121 DAGKVNIDFTQ 130

[Close]

BLAST of HG10002160 vs. TAIR 10
Match: AT4G30380.1 (Barwin-related endoglucanase )

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-26
Identity = 65/115 (56.52%), Postives = 81/115 (70.43%), Query Frame = 0


Query: 15  LVLTLSYAHADTGTATFYTPPYVPSACFGYDDQGTMIAAASVGLFNNGAACGTMYSVTCT 74
           LV   S+++A  G ATFYT  Y P  C+    +G MIAAAS  L++NG  CG M++V C+
Sbjct: 12  LVFLFSFSYATPGIATFYT-SYTP--CYRGTQEGVMIAAASDTLWDNGRVCGKMFTVKCS 71

Query: 75  GPTNLGVPQPCTGNSVTVKVVDLCPSPGCQATIDLSQEAFAIIANPDAGKINIEF 130
           GP N  VP PCTG SV VK+VD CPS GC +T+DLS+EAFA IANP AG INI++
Sbjct: 72  GPRN-AVPHPCTGKSVKVKIVDHCPS-GCASTLDLSREAFAQIANPVAGIINIDY 121

[Close]

BLAST of HG10002160 vs. TAIR 10
Match: AT2G18660.1 (plant natriuretic peptide A )

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-19
Identity = 56/131 (42.75%), Postives = 75/131 (57.25%), Query Frame = 0


Query: 1   MEAVVMKFVVVMVSLVLTLS-YAHADTGTATFYTPPYVPSACFGYDDQGTMIAAASVGLF 60
           M  + +KFVVVM+     L+  A A  G A +Y PPY  SAC+G   + T++      L+
Sbjct: 1   MIKMAVKFVVVMIVFAQILAPIAEAAQGKAVYYDPPYTRSACYG-TQRETLVVGVKNNLW 60

Query: 61  NNGAACGTMYSVTCTGPTNLGVPQPCTGNSVTVKVVDLCPSPGCQATIDLSQEAFAIIAN 120
            NG ACG  Y V C G T     + CTG +V VKVVD C  P C   ++LS++AF +IAN
Sbjct: 61  QNGRACGRRYRVRCIGAT-YNFDRACTGRTVDVKVVDFCREP-CNGDLNLSRDAFRVIAN 120

Query: 121 PDAGKINIEFT 131
            DAG I + +T
Sbjct: 121 TDAGNIRVVYT 128

[Close]

BLAST of HG10002160 vs. TAIR 10
Match: AT1G20190.1 (expansin 11 )

HSP 1 Score: 40.8 bits (94), Expect = 9.8e-04
Identity = 32/83 (38.55%), Postives = 40/83 (48.19%), Query Frame = 0


Query: 27  GTATFY----TPPYVPSACFGYDD-----QGTMIAAASVGLFNNGAACGTMYSVTCTGPT 86
           G ATFY        +  AC GY D      GTM AA S  LFN+GA+CG  Y +TC    
Sbjct: 29  GHATFYGGSDASGTMGGAC-GYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAA 88

Query: 87  NLGVPQPC-TGNSVTVKVVDLCP 100
           +    + C  G SV +   + CP
Sbjct: 89  D---SRWCLKGASVVITATNFCP 107

The following BLAST results are available for this feature:

BLAST of HG10002160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876066.1	4.2e-57	88.19	EG45-like domain containing protein [Benincasa hispida]	[more]
XP_023540582.1	6.1e-56	83.97	EG45-like domain containing protein isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023540583.1	6.1e-56	83.97	EG45-like domain containing protein isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG7029146.1	7.9e-56	83.97	EG45-like domain containing protein, partial [Cucurbita argyrosperma subsp. argy...	[more]
KAG6597700.1	1.8e-55	83.21	EG45-like domain containing protein, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of HG10002160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZP41	4.5e-38	65.04	EG45-like domain containing protein OS=Citrus jambhiri OX=64884 GN=CjBAp12 PE=1 ...	[more]
Q9M0C2	2.6e-25	56.52	Putative EG45-like domain containing protein 1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9ZV52	1.8e-18	42.75	EG45-like domain containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=EGC2 PE...	[more]
Q6H677	1.7e-05	30.86	Putative expansin-B14 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB14 PE=3 SV...	[more]
Q7G6Z2	3.3e-04	40.23	Expansin-A12 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA12 PE=2 SV=1	[more]

BLAST of HG10002160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IAQ6	1.5e-55	83.97	EG45-like domain containing protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1I939	1.5e-55	83.97	EG45-like domain containing protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1F2X9	1.9e-55	83.21	EG45-like domain containing protein isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1EXU1	1.9e-55	83.21	EG45-like domain containing protein isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A0A0KX23	4.7e-54	82.44	Expansin-like EG45 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4...	[more]

BLAST of HG10002160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30380.1	1.8e-26	56.52	Barwin-related endoglucanase	[more]
AT2G18660.1	1.3e-19	42.75	plant natriuretic peptide A	[more]
AT1G20190.1	9.8e-04	38.55	expansin 11	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 51..129 e-value: 7.5E-5 score: 32.1
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 27..131 score: 14.335216
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 13..131 e-value: 5.1E-25 score: 90.1
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 12..131
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 52..129 e-value: 1.2E-17 score: 64.0
IPR044206	EG45-like domain containing protein, plant	PANTHER	PTHR47295	EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED	coord: 5..131
None	No IPR available	PANTHER	PTHR47295:SF10	EG45-LIKE DOMAIN CONTAINING PROTEIN ISOFORM X2	coord: 5..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002160.1	HG10002160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009627	systemic acquired resistance
cellular_component	GO:0048046	apoplast