HG10002132 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10002132
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
LocationChr11: 3782975 .. 3788583 (+)
RNA-Seq ExpressionHG10002132
SyntenyHG10002132
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAGAATCAGTCTGTTTTGATTAAGGAGACAGTATTTAAATTGCAGCTTGCACTCCTTGAGGGCATTCAAAATGAGAACCAGCTATTTGCAGCTGGGTCTCTGATGTCTCGGAGTGACTATGAAGATGTGGTGACTGAGCGGTCTATTGCAAACCTCTGTGGATATCCATTATGCCATTCTAATTTGTCATCCGATAACACTAGGAAAGGCCGGTACAGAATTTCATTGAAAGAACATAAGGTTTATGATTTACAAGAGACATATAAGTACTGCTCTTCCACTTGCCTCATTAACAGCCGTGCCTTTTCTGGGAGATTGCAAGATGAGAGATGTTCGGTTATGAATCCAGAGAAACTTAAAGAAACTCTTAGACTGTTTGAGAATCTGAGTTTGGATTCTAAGGAAAAGATGGGGAATAATTCTGATTTGGGGCTTGAAATTCAGGAGAAGATAGATAGCAATATTGGAGAAGTTCCCATTGAAGATTGGATGGGTCCATCAAATGCAATTGAAGGCTATGTGCCTCACAGCGATCATAAGATCATGACTTTGCCCAGCAAGGATGGCAAAGAATCCAAGGATGGTAACTTTTTTCATTTTTTTATTTTCTCTGTATGCCGAAGTTTTATTGTGTTTGGTTGTTGAATTCCATATTGGAGAAGCGTATGCATTAAAAAATGTTCCTAGCAAAAGGAAAAACATTCTTAGAATGCTAAAATGGAGAAGTGGAACTGTAGCTTTGTTTGCATTGGTAGTTAAAGTGAGTTTAAGTACCCTGTCATAGGGTCTAATGCTAAAAGTTTGGCATTGAACTTTTTCTAGTATGCCTGCAACTTGCTGTGTTTGATTGTTAAATTCGATTCATATCGAATTTAATGCACTATTGGGATGTCCCTATGAGAAAAGCTGAAGAGAAAAAAGCATTCTTAGAATACCAAAGAAAAAAGAAAAAAAGAAAAAAAGAAAGTGAAACACTGTATTTATTTGCTCCTGTTAGTTTAATTGAGTTTTGGTGCACTATTTTAGGTTCTAAAGCTAAAAGTAAGCCATTGGGTGGTGGAAAGGATTTCTTCAGCGACTTCTCCTTCACGAGTACTATAATCACAGATGAAGAGTATAGTGTTTCAAAGATATCATCTGGTTTGAAAGAGATGTCTCTTGATACTAATTCAAAGATACAAACAGGAGAATTCTGTGTTAAAGAATCAAATGAACAATTTACCATTTTGGAAACCCCACATGCTCCAGCTCCCACAAAAAACAATGTTGGACGGAAGGCCAAAGGATCCAAAGAAAGGACTAAAGTATCAGCCACCGAAGAAAGTACTAAAAATTTGTCTGATGCTCCTTCAACTTCAAATCAGTGCAATACTAATTGCAATTTAATGACAGAAGAACCAAGAGGTGGATCCAATGATCTTAGCGGAACTGGGATCAAATCCTCCCTTAAACAACCAGGCAAGAAAAACCTGCGTCGCTCTGTAACTTGGGCAGATGAAAAGACTGATGACACCAGTATTATAAACCCTCCAGAGGTCAGAGAAATGGGGAAGACGAAGGAATGTTCCAGAATCACAAACAATTTGGTAAATTCCGACAATGATAATGAGGATCTATTACGGTTTGAATCTGCTGAAGCCTGTGCAATGGCACTGAGCCAGGCAGCTGAAGCAATTACTTCTGGGAAAAATGAGGTCTCTGATGCAGGTAATGTACTCTATGCATGATGATTGAGGTTACTTATTGTACCGCATGCTCTAAAGATTATATTACTTGCATGCCGTTGGCCATTAGATGAGCTCTGCTGAACCTAGTTCTACTTTTCCCTATTTTGATGTATAAACCAATCAGAGATTTAATTTTTGTTGTGTTTCCATTGGTTGTTAGTAAATATATTATCATCCCCTTCTCTGCATTCTTTTTCCTTGAAACATTAAAACTTCATCGTACAAAAAGACAAGGTGGCTTGAACTAGATGGTTATAAAGTTGCTGTATGAATATGAACTAGATGGTTACTCATGTAGTTTTTGTGTTTGGTTCTTTGTAATATTCAGTGTCTGAAGCTGGAATCATTATATTGCCACGCCCAAGTGATGCTAATGAAGAAGCATCTACTAATCCCGTCAACGCATTTGAACCACATTCATTGTCAGAGAAGTCGAACAAACTTGGGGAATTACGTTCTGATCTGTTCGATCCCAATGACTCTTGGTATGATGCGCCTCCAGAGGGTTTCAGCCTAACTGTAAGCACCTTTTCTTTCTTTGGACGTACCTTCTCTTCCTAACCTAAAAATATTCTATTTCCCACCACGTTTACCTTGTTGTTTTCAGTTATCTTCTTTTGCAACCATGTGGATGGCAATCTTTGCATGGATAACATCATCTTCCTTGGCCTACATTTATGGAAAAGATGATAAGTTTCATGAGGAATTTCTATATATTGATGGGAAGGAGTATCCAAGGAAAATTGTCTCTACTGATGGCCGATCTTCTGAAATCAAGCAAACACTTGCTGGATGTCTAACACGGTCAATACCTGGACTTGCTTCTGAACTTAAGCTATCAACCCCAATATCGAGTTTGGAGCACGGGATGGTAATGATAAATATTCATGACATTGTCTTTTTCTCTCATTGACTTTTGTTGGTGATAATTGAGAACTTACACTAGTTTGCACATATGCAGTGCTTATTATTGTTATTATTTATTTTGTGTTGATATATATGTATATTTTAGTATCTGTGGTTCACTGGTACCATTCCCCAGAGGAGTGGCTCTCATTTATATTCTATGGTAATTCTTGGTTTTGATACTTCAAGACACCGCATCTTGATCTAGTTTTTGGAAAACGCTGATGGGAGGAAGGAGGGGATGTTGAATTGCATTCTCTTGAGGAGGCTTTGTTGAATACGATTTTCAATAGAAGTTTTGGAGGGTAGTTATTTTGCTGCATCCTTTGATTCAATGTACCTTGGTAGTCCCAGAAGAGGTCTCATTCTGCAAAATTGGCTAACTAAAAGCTTATTCTGGATATGAATGCAATGTTGGAGACAGCAATAGACAATAATTAAAATGGGAAGAGCGGACATTCTTGTCTCCAACTTGCTGTATATGGATGTTATCCTAATGCTTTTTTGCTTGGATGATCTCACCATGGTGCAGAATTTGCTTTCCATTTTGGATTTTTTTGAAGTTCTTACTTCCAAAAATTAGCTAGCCAAGACCATGGTTACAGGTTGGGGTCGTAGGAACTAAGAATTGTCTAATTCTGACAATATATTTCACTTCAAAGTTTGAGATTTGACCCATAAAGTAAGTAGTCCTTGCCTCTAAGGGTAAATCAAAAGGATGGTAACCGATTCTTGAGAAAGTTCAAAGGAAAAATTCTCTAGTGGGACTTTTCTAATCCTAGCTGTTTTTTGTCCCGTTCCTTGGGAAAGAAATATTTCATTGATTGATGAAATAAAGGGAAACCCCTGGCACCAATAAGTGATTAATTAAAAAAAGATAAGCTATAATGAGTAAAATGATGTTTAGATTTGCCAAAAAAAAAAAAAAACTATTGTGTTCTCCCCAAAAAATCTAGAAGAAAGCACGTGTAAGTGCCAATGAAACTGTTTTTTTGGTACCTTCAAAAGGATGAGCCTCCAATAAAGAAGCAAGGAGGTAAAAAATATTATTAGGACACCAGTAGCGACTAACCGAAAGCCTCCAATATAATACTGTCTATTGCTGGCCCTCTTTATTGTAAGTAGTGCATACTGAAGTGGTTTTTATTAGGAGAGACTTCCATTCAAGATTGCCTTTGGGAGATTGCAGAAGCAAACGGAGTGTATATTCTTATGATATCTCACCGTCAATAATTTAACTAAGCATTATTATCTTGGAGATTTAAGTTAGTGGGAACATTAAAGCTATAGACCTTGCTATACTCTCGAAATGGTTGCAGTGATTCACTATTGTGCTTCCCATGGCACTAGGAGATTAGAAAGTTGTTGATTTTAGATTGACTCAGAAAACTGTGCTGTCTTCTTCTAGATCCCCTGCTTTATTTTTAGGGCAGGTGCTGGTATCTTTCAAAACAGGGCATTGTTGGTTTAAAGTCTGAACGGGGTGAGGGGGTTGGGGTTGAGGGAGGATTCTTGGATGTATGTATCCCTATCTCCTCTTTAAACTCGGTTTTTTGGCTTGTGGTTTCTATTCTATTGTTACCTTTTTTTTTTAATATATATTTTTTAAGGAAACAAAACTTTTCATTGATGAAATGAAAAAGTGTAATGCTCCAAATACAAGGATACATAATACAAATATACAAATGAAAAGACAAGGAGAACTTTAAACTCTATTCTATTGTTACTATTGAAGACTGGACGGAATTCTGCATGGAATTTTAAATTTAGAAGGCATTCCCTTGATTTTGGAAGGTCTTATACCACATGAGAGAAGGATACTGTTAATTCAACTTTGGCATATGAGTGACGTTGATTCATGTTCTTGTGCAGGGGCACTTGTTAGACACCATGACTTTCCTTGATGCACTTCCAGCATTCAGAATGAAGCAGTGGCAAGTAATTGTTCTCTTATTTATAGAAGCGTTATCTGTTTGCCGGATTCCTTCACTTGCCACCCACATGTCAAATAGTAGAAGTCTATATCACAAGGTTTGGCTCCCTATAAATCTCTGCCCTCTTGCTTAGAAATGAATGCTTGTGTTGAACTGAATGTTGAACAAGCAGTTTAAGAGTTAAAAATGATAATATAGATGATCAAACATGCTTTATTTATTAGTTAGCTAATGACAAGTTCTAAAACTGTATACTAGGAGTTTTTGAATTGTATGTGTAGAATTGATATTAAATTAACTTGTGCTCTTTTTATAGTGCTAAATGAAAATTGGTTGTTGACATGCTCTTATTCCTCTCCTTGACTGAAATTTTTTCGTTTTGAGGAAATCGCAATAAGATGTTGAAATTGCCGCACATACTTTATCTGATCATTGTCCTTTTCTATTAAAGCACCTCTGTAGTTTTTATTTTCTTCCATCCTTTTGCACCTGCATTCTTTTTTCTACTTCTTTTGTGCCTGCTTGTATATTCAATTTTTTCAGTCGAACAAATGAAAGCATCGTTTCCTGAGAAATAAATATTTTGTCAATTTTATTTTATTTTTGAGGACGACAGATATTTGTTTCTTGATTCTAATGGTGGATTTTCCTCGATCCAAAATTTGAAATTTGTTTAGTAATATTGTTTAGTTCTCAGAGAAATGCTATTACATAGTTTAATGATGCCCTCTAAAGTTCATGTCATGCTCTTGTGTAGCGTAAGTGATAGATCATGAAGAGTACTTGTATATTATAGCTAACCTCAGAAAAAAATTTCTTTTTAAAAAAATAGAAATAAAATAAAATAAGAGAGAATTCTGATGAAATGCCATATTCCTTGATTTTAAATTGTGGTATACTTTAACATCCTGCTTGGCTCTCATGTACATAGGTGCTTGATCGTGCTCAGATACGACCCGACGAATTCGAGCTTATGAAAGATCATATATTACCGCTTGGTCGAACAGCTCAATTTTCAGTTGAGAATGATGCCTAA

mRNA sequence

ATGGCGAAGAATCAGTCTGTTTTGATTAAGGAGACAGTATTTAAATTGCAGCTTGCACTCCTTGAGGGCATTCAAAATGAGAACCAGCTATTTGCAGCTGGGTCTCTGATGTCTCGGAGTGACTATGAAGATGTGGTGACTGAGCGGTCTATTGCAAACCTCTGTGGATATCCATTATGCCATTCTAATTTGTCATCCGATAACACTAGGAAAGGCCGGTACAGAATTTCATTGAAAGAACATAAGGTTTATGATTTACAAGAGACATATAAGTACTGCTCTTCCACTTGCCTCATTAACAGCCGTGCCTTTTCTGGGAGATTGCAAGATGAGAGATGTTCGGTTATGAATCCAGAGAAACTTAAAGAAACTCTTAGACTGTTTGAGAATCTGAGTTTGGATTCTAAGGAAAAGATGGGGAATAATTCTGATTTGGGGCTTGAAATTCAGGAGAAGATAGATAGCAATATTGGAGAAGTTCCCATTGAAGATTGGATGGGTCCATCAAATGCAATTGAAGGCTATGTGCCTCACAGCGATCATAAGATCATGACTTTGCCCAGCAAGGATGGCAAAGAATCCAAGGATGGTTCTAAAGCTAAAAGTAAGCCATTGGGTGGTGGAAAGGATTTCTTCAGCGACTTCTCCTTCACGAGTACTATAATCACAGATGAAGAGTATAGTGTTTCAAAGATATCATCTGGTTTGAAAGAGATGTCTCTTGATACTAATTCAAAGATACAAACAGGAGAATTCTGTGTTAAAGAATCAAATGAACAATTTACCATTTTGGAAACCCCACATGCTCCAGCTCCCACAAAAAACAATGTTGGACGGAAGGCCAAAGGATCCAAAGAAAGGACTAAAGTATCAGCCACCGAAGAAAGTACTAAAAATTTGTCTGATGCTCCTTCAACTTCAAATCAGTGCAATACTAATTGCAATTTAATGACAGAAGAACCAAGAGGTGGATCCAATGATCTTAGCGGAACTGGGATCAAATCCTCCCTTAAACAACCAGGCAAGAAAAACCTGCGTCGCTCTGTAACTTGGGCAGATGAAAAGACTGATGACACCAGTATTATAAACCCTCCAGAGGTCAGAGAAATGGGGAAGACGAAGGAATGTTCCAGAATCACAAACAATTTGGTAAATTCCGACAATGATAATGAGGATCTATTACGGTTTGAATCTGCTGAAGCCTGTGCAATGGCACTGAGCCAGGCAGCTGAAGCAATTACTTCTGGGAAAAATGAGGTCTCTGATGCAGTGTCTGAAGCTGGAATCATTATATTGCCACGCCCAAGTGATGCTAATGAAGAAGCATCTACTAATCCCGTCAACGCATTTGAACCACATTCATTGTCAGAGAAGTCGAACAAACTTGGGGAATTACGTTCTGATCTGTTCGATCCCAATGACTCTTGGTATGATGCGCCTCCAGAGGGTTTCAGCCTAACTTTATCTTCTTTTGCAACCATGTGGATGGCAATCTTTGCATGGATAACATCATCTTCCTTGGCCTACATTTATGGAAAAGATGATAAGTTTCATGAGGAATTTCTATATATTGATGGGAAGGAGTATCCAAGGAAAATTGTCTCTACTGATGGCCGATCTTCTGAAATCAAGCAAACACTTGCTGGATGTCTAACACGGTCAATACCTGGACTTGCTTCTGAACTTAAGCTATCAACCCCAATATCGAGTTTGGAGCACGGGATGGGCAGGTGCTGGTATCTTTCAAAACAGGGCATTGTTGGTTTAAAGTCTGAACGGGGTGAGGGGGTTGGGGTTGAGGGAGGATTCTTGGATGGGCACTTGTTAGACACCATGACTTTCCTTGATGCACTTCCAGCATTCAGAATGAAGCAGTGGCAAGTGCTTGATCGTGCTCAGATACGACCCGACGAATTCGAGCTTATGAAAGATCATATATTACCGCTTGGTCGAACAGCTCAATTTTCAGTTGAGAATGATGCCTAA

Coding sequence (CDS)

ATGGCGAAGAATCAGTCTGTTTTGATTAAGGAGACAGTATTTAAATTGCAGCTTGCACTCCTTGAGGGCATTCAAAATGAGAACCAGCTATTTGCAGCTGGGTCTCTGATGTCTCGGAGTGACTATGAAGATGTGGTGACTGAGCGGTCTATTGCAAACCTCTGTGGATATCCATTATGCCATTCTAATTTGTCATCCGATAACACTAGGAAAGGCCGGTACAGAATTTCATTGAAAGAACATAAGGTTTATGATTTACAAGAGACATATAAGTACTGCTCTTCCACTTGCCTCATTAACAGCCGTGCCTTTTCTGGGAGATTGCAAGATGAGAGATGTTCGGTTATGAATCCAGAGAAACTTAAAGAAACTCTTAGACTGTTTGAGAATCTGAGTTTGGATTCTAAGGAAAAGATGGGGAATAATTCTGATTTGGGGCTTGAAATTCAGGAGAAGATAGATAGCAATATTGGAGAAGTTCCCATTGAAGATTGGATGGGTCCATCAAATGCAATTGAAGGCTATGTGCCTCACAGCGATCATAAGATCATGACTTTGCCCAGCAAGGATGGCAAAGAATCCAAGGATGGTTCTAAAGCTAAAAGTAAGCCATTGGGTGGTGGAAAGGATTTCTTCAGCGACTTCTCCTTCACGAGTACTATAATCACAGATGAAGAGTATAGTGTTTCAAAGATATCATCTGGTTTGAAAGAGATGTCTCTTGATACTAATTCAAAGATACAAACAGGAGAATTCTGTGTTAAAGAATCAAATGAACAATTTACCATTTTGGAAACCCCACATGCTCCAGCTCCCACAAAAAACAATGTTGGACGGAAGGCCAAAGGATCCAAAGAAAGGACTAAAGTATCAGCCACCGAAGAAAGTACTAAAAATTTGTCTGATGCTCCTTCAACTTCAAATCAGTGCAATACTAATTGCAATTTAATGACAGAAGAACCAAGAGGTGGATCCAATGATCTTAGCGGAACTGGGATCAAATCCTCCCTTAAACAACCAGGCAAGAAAAACCTGCGTCGCTCTGTAACTTGGGCAGATGAAAAGACTGATGACACCAGTATTATAAACCCTCCAGAGGTCAGAGAAATGGGGAAGACGAAGGAATGTTCCAGAATCACAAACAATTTGGTAAATTCCGACAATGATAATGAGGATCTATTACGGTTTGAATCTGCTGAAGCCTGTGCAATGGCACTGAGCCAGGCAGCTGAAGCAATTACTTCTGGGAAAAATGAGGTCTCTGATGCAGTGTCTGAAGCTGGAATCATTATATTGCCACGCCCAAGTGATGCTAATGAAGAAGCATCTACTAATCCCGTCAACGCATTTGAACCACATTCATTGTCAGAGAAGTCGAACAAACTTGGGGAATTACGTTCTGATCTGTTCGATCCCAATGACTCTTGGTATGATGCGCCTCCAGAGGGTTTCAGCCTAACTTTATCTTCTTTTGCAACCATGTGGATGGCAATCTTTGCATGGATAACATCATCTTCCTTGGCCTACATTTATGGAAAAGATGATAAGTTTCATGAGGAATTTCTATATATTGATGGGAAGGAGTATCCAAGGAAAATTGTCTCTACTGATGGCCGATCTTCTGAAATCAAGCAAACACTTGCTGGATGTCTAACACGGTCAATACCTGGACTTGCTTCTGAACTTAAGCTATCAACCCCAATATCGAGTTTGGAGCACGGGATGGGCAGGTGCTGGTATCTTTCAAAACAGGGCATTGTTGGTTTAAAGTCTGAACGGGGTGAGGGGGTTGGGGTTGAGGGAGGATTCTTGGATGGGCACTTGTTAGACACCATGACTTTCCTTGATGCACTTCCAGCATTCAGAATGAAGCAGTGGCAAGTGCTTGATCGTGCTCAGATACGACCCGACGAATTCGAGCTTATGAAAGATCATATATTACCGCTTGGTCGAACAGCTCAATTTTCAGTTGAGAATGATGCCTAA

Protein sequence

MAKNQSVLIKETVFKLQLALLEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLCHSNLSSDNTRKGRYRISLKEHKVYDLQETYKYCSSTCLINSRAFSGRLQDERCSVMNPEKLKETLRLFENLSLDSKEKMGNNSDLGLEIQEKIDSNIGEVPIEDWMGPSNAIEGYVPHSDHKIMTLPSKDGKESKDGSKAKSKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSGLKEMSLDTNSKIQTGEFCVKESNEQFTILETPHAPAPTKNNVGRKAKGSKERTKVSATEESTKNLSDAPSTSNQCNTNCNLMTEEPRGGSNDLSGTGIKSSLKQPGKKNLRRSVTWADEKTDDTSIINPPEVREMGKTKECSRITNNLVNSDNDNEDLLRFESAEACAMALSQAAEAITSGKNEVSDAVSEAGIIILPRPSDANEEASTNPVNAFEPHSLSEKSNKLGELRSDLFDPNDSWYDAPPEGFSLTLSSFATMWMAIFAWITSSSLAYIYGKDDKFHEEFLYIDGKEYPRKIVSTDGRSSEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMGRCWYLSKQGIVGLKSERGEGVGVEGGFLDGHLLDTMTFLDALPAFRMKQWQVLDRAQIRPDEFELMKDHILPLGRTAQFSVENDA
Homology
[Close]
BLAST of HG10002132 vs. NCBI nr
Match: XP_038893419.1 (putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Benincasa hispida])

HSP 1 Score: 1107.8 bits (2864), Expect = 0.0e+00
Identity = 582/692 (84.10%), Postives = 602/692 (86.99%), Query Frame = 0 

Query: 1   MAKNQSVLIKETVFKLQLALLEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60
           MAKNQSVLIK+TV+KLQLALLEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC
Sbjct: 1   MAKNQSVLIKDTVYKLQLALLEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60

Query: 61  HSNLSSDNTRKGRYRISLKEHKVYDLQETYKYCSSTCLINSRAFSGRLQDERCSVMNPEK 120
           HSNLSSDNTR+GRYRISLKEHKVYDLQETYKYCSSTCLINSRAFSGRLQ+ERCSVMNPEK
Sbjct: 61  HSNLSSDNTRRGRYRISLKEHKVYDLQETYKYCSSTCLINSRAFSGRLQNERCSVMNPEK 120

Query: 121 LKETLRLFENLSLDSKEKMGNNSDLGLEIQEKIDSNIGEVPIEDWMGPSNAIEGYVPHSD 180
           LKE LRLFENLSLDSKE +GNN DLGLEIQE I+SN GEVPIE+WMGPSNAIEGYVPH D
Sbjct: 121 LKEILRLFENLSLDSKENVGNNCDLGLEIQENIESNTGEVPIEEWMGPSNAIEGYVPHRD 180

Query: 181 HKIMTLPSKDGKESKDGSKAKSKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSGLKEMS 240
           HKIMTLPSKDGKESKDGSKAK KPLGGGKDFFSD SFTSTI+TDEEYSVSKISSGLKEM+
Sbjct: 181 HKIMTLPSKDGKESKDGSKAKIKPLGGGKDFFSDLSFTSTILTDEEYSVSKISSGLKEMA 240

Query: 241 LDTNSKIQTGEFCVKESNEQFTILETPHAPAPTKNNVGRKAKGSKERTKVSATEESTKNL 300
            DT+SKIQTGE C KES +QFTILETPHAPAPTKN+VGRKA+GSKERTKVSAT+EST NL
Sbjct: 241 FDTDSKIQTGELCGKESKDQFTILETPHAPAPTKNSVGRKARGSKERTKVSATKESTNNL 300

Query: 301 SDAPSTSNQCNTNCNLMTEEPRGGSNDLSGTGIKSSLKQPGKKNLRRSVTWADEKTDDTS 360
           SDAPSTSNQCNTNCNLMTEEPRGGSNDLSGT IKSSLKQPGKKNL RSVTWADEKT DTS
Sbjct: 301 SDAPSTSNQCNTNCNLMTEEPRGGSNDLSGTEIKSSLKQPGKKNLHRSVTWADEKTVDTS 360

Query: 361 IINPPEVREMGKTKECSRITNNLVNSDNDNEDLLRFESAEACAMALSQAAEAITSGKNEV 420
           IIN PEVREMGK KECSRIT NLVNSDNDN DLLR ESAEACAMAL+QAAEAI+SG+NEV
Sbjct: 361 IINLPEVREMGKKKECSRITRNLVNSDNDNGDLLRVESAEACAMALTQAAEAISSGQNEV 420

Query: 421 SDAVSEAGIIILPRPSDANEEASTNPVNAFEPHSLSEKSNKLGELRSDLFDPNDSWYDAP 480
           SDAVSEAGIIILPRP+D NEEASTNPVNA EPHS SEKSNKLG LRSDLFDPNDSWYDAP
Sbjct: 421 SDAVSEAGIIILPRPNDGNEEASTNPVNASEPHSSSEKSNKLGVLRSDLFDPNDSWYDAP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWITSSSLAYIYGKDDKFHEEFLYIDGKEYPRKIVSTDGRS 540
           PEGFSLTLSSFATMWMAIFAWITSSSLAYIYGKDDKFHEEFLYIDGKEYPRKIVS DGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWITSSSLAYIYGKDDKFHEEFLYIDGKEYPRKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMGRCWYLSKQGIVGLKSERGEGVGVE 600
           SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGM                         
Sbjct: 541 SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGM------------------------- 600

Query: 601 GGFLDGHLLDTMTFLDALPAFRMKQWQ-------------------------------VL 660
                GHLLDTMTFLDALPAFRMKQWQ                               VL
Sbjct: 601 -----GHLLDTMTFLDALPAFRMKQWQVIVLLFIEALSVCQIPSLASHMSNSRSLYHKVL 660

Query: 661 DRAQIRPDEFELMKDHILPLGRTAQFSVENDA 662
           DRAQIR DE+E+MKDHILPLGR AQFS ENDA
Sbjct: 661 DRAQIRSDEYEVMKDHILPLGRIAQFSGENDA 662

[Close]
BLAST of HG10002132 vs. NCBI nr
Match: XP_031739958.1 (putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Cucumis sativus] >KGN52984.1 hypothetical protein Csa_015280 [Cucumis sativus])

HSP 1 Score: 1059.3 bits (2738), Expect = 1.4e-305
Identity = 557/692 (80.49%), Postives = 590/692 (85.26%), Query Frame = 0 

Query: 1   MAKNQSVLIKETVFKLQLALLEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60
           MAKNQSVLIK+TV+KLQLAL EGI+NENQLFAAGSLMSRSDYEDVVTERSIA+LCGYPLC
Sbjct: 1   MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC 60

Query: 61  HSNLSSDNTRKGRYRISLKEHKVYDLQETYKYCSSTCLINSRAFSGRLQDERCSVMNPEK 120
           HSNL SDNTR+GRYRISLKEHKVYDL+ETYKYCSS CLINSRAFSGRLQDERCSVMNP+K
Sbjct: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPDK 120

Query: 121 LKETLRLFENLSLDSKEKMGNNSDLGLEIQEKIDSNIGEVPIEDWMGPSNAIEGYVPHSD 180
           LKE L+LFEN+SLDSKE MGNN D GLEIQEKI+SNIGEVPIE+WMGPSNAIEGYVPH D
Sbjct: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESNIGEVPIEEWMGPSNAIEGYVPHRD 180

Query: 181 HKIMTLPSKDGKESKDGSKAKSKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSGLKEMS 240
           HK+MTL SKDGKESKDGSKAK KPLGGGKDFFSDFS TSTIITDEEYSVSKISSGLKEM+
Sbjct: 181 HKVMTLHSKDGKESKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMA 240

Query: 241 LDTNSKIQTGEFCVKESNEQFTILETPHAPAPTKNNVGRKAKGSKERTKVSATEESTKNL 300
           LDTNSK QTGEFC KESN+QF ILETPHAPAP KN+VGRKA+GSKERTKVSAT+EST NL
Sbjct: 241 LDTNSKNQTGEFCGKESNDQFAILETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNL 300

Query: 301 SDAPSTSNQCNTNCNLMTEEPRGGSNDLSGTGIKSSLKQPGKKNLRRSVTWADEKTDDTS 360
           SDAPSTS   +TN NLMTEEPRGG NDLSGT +KSSLK+PGKKNL RSVTWADEKTDD S
Sbjct: 301 SDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDAS 360

Query: 361 IINPPEVREMGKTKECSRITNNLVNSDNDNEDLLRFESAEACAMALSQAAEAITSGKNEV 420
           I+N PEV EMGKTKECSR T+NLVN DNDNED+LR ESAEACAMALSQAAEAITSG++EV
Sbjct: 361 IMNLPEVGEMGKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEV 420

Query: 421 SDAVSEAGIIILPRPSDANEEASTNPVNAFEPHSLSEKSNKLGELRSDLFDPNDSWYDAP 480
           SDAVSEAGIIILP PSDANEEAST+PVNA EPHS SEKSNKLG LRSDLFDP+DSWYDAP
Sbjct: 421 SDAVSEAGIIILPHPSDANEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWITSSSLAYIYGKDDKFHEEFLYIDGKEYPRKIVSTDGRS 540
           PEGFSLTLSSFATMWMAIFAW+TSSSLAYIYGKDDKFHEEFLYIDGKEYP KIVS DGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMGRCWYLSKQGIVGLKSERGEGVGVE 600
           SEIKQTLAGCLTR+IPGLASEL LSTPIS LE+GM                         
Sbjct: 541 SEIKQTLAGCLTRAIPGLASELNLSTPISRLENGM------------------------- 600

Query: 601 GGFLDGHLLDTMTFLDALPAFRMKQWQ-------------------------------VL 660
                 HLLDTMTFLDALPAFRMKQWQ                               VL
Sbjct: 601 -----AHLLDTMTFLDALPAFRMKQWQVIVLLFIEALSVSRIPSLASHMSSSRNLYHKVL 660

Query: 661 DRAQIRPDEFELMKDHILPLGRTAQFSVENDA 662
           DRAQIR DE+E+M+DHILPLGRTAQ S ENDA
Sbjct: 661 DRAQIRSDEYEIMRDHILPLGRTAQLSDENDA 662

[Close]
BLAST of HG10002132 vs. NCBI nr
Match: XP_008454119.1 (PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Cucumis melo] >XP_008454120.1 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Cucumis melo])

HSP 1 Score: 1047.0 bits (2706), Expect = 7.0e-302
Identity = 555/692 (80.20%), Postives = 584/692 (84.39%), Query Frame = 0 

Query: 1   MAKNQSVLIKETVFKLQLALLEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60
           MAKNQS LIK+TV+KLQLAL EGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC
Sbjct: 1   MAKNQSALIKDTVYKLQLALYEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60

Query: 61  HSNLSSDNTRKGRYRISLKEHKVYDLQETYKYCSSTCLINSRAFSGRLQDERCSVMNPEK 120
           HSNL SDNTR+GRYRISLKEHKVYDL+ETYKYCSS CLINSRAFSGRLQDERCSVMNP K
Sbjct: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPAK 120

Query: 121 LKETLRLFENLSLDSKEKMGNNSDLGLEIQEKIDSNIGEVPIEDWMGPSNAIEGYVPHSD 180
           LKE L+LFEN+SLDSKE MGNN D GLEIQEKI+S+IGEVPIE+WMGPSNAIEGYVPH D
Sbjct: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESSIGEVPIEEWMGPSNAIEGYVPHRD 180

Query: 181 HKIMTLPSKDGKESKDGSKAKSKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSGLKEMS 240
           HKIMTLPSKDGKESKDGS AK KPLGGGKDFFSDFSFTSTIITDEEYSVSKISS LKEM+
Sbjct: 181 HKIMTLPSKDGKESKDGSTAKIKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSSLKEMA 240

Query: 241 LDTNSKIQTGEFCVKESNEQFTILETPHAPAPTKNNVGRKAKGSKERTKVSATEESTKNL 300
           LDTNSKIQTGEFC KESN+QFTILET HA AP KN+VG KA+GSKERTKVSATEEST NL
Sbjct: 241 LDTNSKIQTGEFCGKESNDQFTILETSHARAPPKNSVGHKARGSKERTKVSATEESTNNL 300

Query: 301 SDAPSTSNQCNTNCNLMTEEPRGGSNDLSGTGIKSSLKQPGKKNLRRSVTWADEKTDDTS 360
           SDAPSTSN  +TN NL+TEEP+GG NDL GT IKSSLKQPGKKNLRRSVTWADEK DDTS
Sbjct: 301 SDAPSTSNNRSTNFNLVTEEPKGGFNDLRGTEIKSSLKQPGKKNLRRSVTWADEKIDDTS 360

Query: 361 IINPPEVREMGKTKECSRITNNLVNSDNDNEDLLRFESAEACAMALSQAAEAITSGKNEV 420
            +N PEV E GKTKECSRIT+NLVN DNDNEDL+R ESAEACAMALSQAAEAITSG++EV
Sbjct: 361 -MNLPEVGEKGKTKECSRITSNLVNFDNDNEDLIRVESAEACAMALSQAAEAITSGQSEV 420

Query: 421 SDAVSEAGIIILPRPSDANEEASTNPVNAFEPHSLSEKSNKLGELRSDLFDPNDSWYDAP 480
           S+AVSEAGIIILP PSDANEEAST PV A EPHS SEKSNKLG L SDLFDP+DSWYDAP
Sbjct: 421 SEAVSEAGIIILPHPSDANEEASTEPVKASEPHSFSEKSNKLGVLHSDLFDPSDSWYDAP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWITSSSLAYIYGKDDKFHEEFLYIDGKEYPRKIVSTDGRS 540
           PEGFSLTLSSFATMWMAIFAW+TSSSLAYIYGKDDKFHEEF YIDGKEYP KIVS DGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFQYIDGKEYPSKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMGRCWYLSKQGIVGLKSERGEGVGVE 600
           SEIKQTLAGCLTR+IPGLASELKLSTPIS LE+GM                         
Sbjct: 541 SEIKQTLAGCLTRAIPGLASELKLSTPISRLEYGM------------------------- 600

Query: 601 GGFLDGHLLDTMTFLDALPAFRMKQWQ-------------------------------VL 660
                 HLLDTMTFLDALPAFRMKQWQ                               VL
Sbjct: 601 -----AHLLDTMTFLDALPAFRMKQWQVIVLLFMEALSVCRIPSLASHMSSSRNLYHKVL 660

Query: 661 DRAQIRPDEFELMKDHILPLGRTAQFSVENDA 662
           DRAQI+ DE+E+MKDHILPLG TAQ SVENDA
Sbjct: 661 DRAQIQSDEYEIMKDHILPLGLTAQLSVENDA 661

[Close]
BLAST of HG10002132 vs. NCBI nr
Match: KAA0044516.1 (putative RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1043.5 bits (2697), Expect = 7.8e-301
Identity = 552/692 (79.77%), Postives = 585/692 (84.54%), Query Frame = 0 

Query: 1   MAKNQSVLIKETVFKLQLALLEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60
           MAKNQS LIK+TV+KLQLAL EGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC
Sbjct: 1   MAKNQSALIKDTVYKLQLALYEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60

Query: 61  HSNLSSDNTRKGRYRISLKEHKVYDLQETYKYCSSTCLINSRAFSGRLQDERCSVMNPEK 120
           HSNL SDNTR+GRYRISLKEHKVYDL+ETYKYCSS CLINSRAFSGRLQDERCSVMNP K
Sbjct: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPAK 120

Query: 121 LKETLRLFENLSLDSKEKMGNNSDLGLEIQEKIDSNIGEVPIEDWMGPSNAIEGYVPHSD 180
           LK+ L+LFEN+SLDSKE +GNN D GLEIQEKI+S+IGEVPIE+WMGPSNAIEGYVPH D
Sbjct: 121 LKDILKLFENMSLDSKENVGNNCDSGLEIQEKIESSIGEVPIEEWMGPSNAIEGYVPHRD 180

Query: 181 HKIMTLPSKDGKESKDGSKAKSKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSGLKEMS 240
           HKIMTLPSKDGKESKDGS AK KPLGGGKDFFSDFSFTSTIITDEEYSVSKISS LKEM+
Sbjct: 181 HKIMTLPSKDGKESKDGSTAKIKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSSLKEMA 240

Query: 241 LDTNSKIQTGEFCVKESNEQFTILETPHAPAPTKNNVGRKAKGSKERTKVSATEESTKNL 300
           LDTNSKIQTGEFC KESN+QFTILET HA AP KN+VG KA+GSKERTKVSATEEST NL
Sbjct: 241 LDTNSKIQTGEFCGKESNDQFTILETSHARAPPKNSVGHKARGSKERTKVSATEESTNNL 300

Query: 301 SDAPSTSNQCNTNCNLMTEEPRGGSNDLSGTGIKSSLKQPGKKNLRRSVTWADEKTDDTS 360
           SDAPSTSN  +TN NL+TEEP+GG NDL GT IKSSLKQPGKKNLRRSVTWADEK DDTS
Sbjct: 301 SDAPSTSNNRSTNFNLVTEEPKGGFNDLRGTEIKSSLKQPGKKNLRRSVTWADEKIDDTS 360

Query: 361 IINPPEVREMGKTKECSRITNNLVNSDNDNEDLLRFESAEACAMALSQAAEAITSGKNEV 420
            +N PEV E GKTKECSRIT+NLVN DNDNEDLLR ESAEACAMALSQAAEAITSG++EV
Sbjct: 361 -MNLPEVGEKGKTKECSRITSNLVNFDNDNEDLLRVESAEACAMALSQAAEAITSGQSEV 420

Query: 421 SDAVSEAGIIILPRPSDANEEASTNPVNAFEPHSLSEKSNKLGELRSDLFDPNDSWYDAP 480
           S+AVSEAGIIILP PSDANEEAST+PV A EPHS SEKSNKLG L SDLFDP++SWYDAP
Sbjct: 421 SEAVSEAGIIILPHPSDANEEASTDPVKASEPHSFSEKSNKLGVLHSDLFDPSESWYDAP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWITSSSLAYIYGKDDKFHEEFLYIDGKEYPRKIVSTDGRS 540
           PEGFSLTLSSFATMWMAIFAW+TSSSLAYIYGKDDKFHEEF YIDGKEYP KIVS DGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFQYIDGKEYPSKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMGRCWYLSKQGIVGLKSERGEGVGVE 600
           SEIKQTLAGCLTR+IPGLASELKLSTP+S LE+GM                         
Sbjct: 541 SEIKQTLAGCLTRAIPGLASELKLSTPVSRLEYGM------------------------- 600

Query: 601 GGFLDGHLLDTMTFLDALPAFRMKQWQ-------------------------------VL 660
                 HLLDTMTFLDALPAFRMKQWQ                               VL
Sbjct: 601 -----AHLLDTMTFLDALPAFRMKQWQVIVLLFIEALSVCRIPSLASHMSSSRNLYHKVL 660

Query: 661 DRAQIRPDEFELMKDHILPLGRTAQFSVENDA 662
           DRAQI+ DE+E+MKDHILPLG TAQ SVENDA
Sbjct: 661 DRAQIQSDEYEIMKDHILPLGLTAQLSVENDA 661

[Close]
BLAST of HG10002132 vs. NCBI nr
Match: XP_022955995.1 (putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X1 [Cucurbita moschata])

HSP 1 Score: 1038.5 bits (2684), Expect = 2.5e-299
Identity = 549/692 (79.34%), Postives = 580/692 (83.82%), Query Frame = 0 

Query: 1   MAKNQSVLIKETVFKLQLALLEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60
           MAKNQ++LIK+TV+KLQLALL+GI NENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC
Sbjct: 1   MAKNQTILIKDTVYKLQLALLDGIHNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60

Query: 61  HSNLSSDNTRKGRYRISLKEHKVYDLQETYKYCSSTCLINSRAFSGRLQDERCSVMNPEK 120
            SNL SDNTRKGRYRISLKEHKVYDL+ETYKYCSSTCLINSRAFSGRLQDERCSVMNP K
Sbjct: 61  QSNLPSDNTRKGRYRISLKEHKVYDLEETYKYCSSTCLINSRAFSGRLQDERCSVMNPGK 120

Query: 121 LKETLRLFENLSLDSKEKMGNNSDLGLEIQEKIDSNIGEVPIEDWMGPSNAIEGYVPHSD 180
           LKE LRLFENLSLDSKE   N+ DLGLEIQEKI+S+IGEVPIE+WMGPSNAIEGYVPH +
Sbjct: 121 LKEILRLFENLSLDSKENTRNSCDLGLEIQEKIESSIGEVPIEEWMGPSNAIEGYVPHRN 180

Query: 181 HKIMTLPSKDGKESKDGSKAKSKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSGLKEMS 240
           H IMT P KDGKE KDGSKAK K LG GKDFFSDFSF +T+ITDEEYSVSKISSGLKEM+
Sbjct: 181 HNIMTSPRKDGKELKDGSKAKIKQLGVGKDFFSDFSFATTVITDEEYSVSKISSGLKEMT 240

Query: 241 LDTNSKIQTGEFCVKESNEQFTILETPHAPAPTKNNVGRKAKGSKERTKVSATEESTKNL 300
            DT SK QTGEFC K+SNEQFTILETPH PAPTKN+VGRKA+GSKERT VSAT ES  NL
Sbjct: 241 FDTKSKAQTGEFCGKQSNEQFTILETPHGPAPTKNSVGRKARGSKERTNVSATAESNNNL 300

Query: 301 SDAPSTSNQCNTNCNLMTEEPRGGSNDLSGTGIKSSLKQPGKKNLRRSVTWADEKTDDTS 360
           SDAPSTSN C+TNCN+ TEEP GGSNDL+ T IKSSLKQPGKKNLRRSVTWAD KTD+TS
Sbjct: 301 SDAPSTSNHCSTNCNITTEEPNGGSNDLNETQIKSSLKQPGKKNLRRSVTWADAKTDETS 360

Query: 361 IINPPEVREMGKTKECSRITNNLVNSDNDNEDLLRFESAEACAMALSQAAEAITSGKNEV 420
           IIN PE REMGKTKECSR+T+NLVN+DN NED+LR ESAEACAMALSQAAEAITSGKNEV
Sbjct: 361 IINLPEDREMGKTKECSRMTSNLVNADNGNEDILRVESAEACAMALSQAAEAITSGKNEV 420

Query: 421 SDAVSEAGIIILPRPSDANEEASTNPVNAFEPHSLSEKSNKLGELRSDLFDPNDSWYDAP 480
           SDAVSEAGIIILPRPSDANEEASTN  N  EPHS SEKSNK G LRSDLFDPNDSWYD+P
Sbjct: 421 SDAVSEAGIIILPRPSDANEEASTNGENISEPHSSSEKSNKPGILRSDLFDPNDSWYDSP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWITSSSLAYIYGKDDKFHEEFLYIDGKEYPRKIVSTDGRS 540
           PEGFSLTLSSFATMWMAIFAW+TSSSLAYIYGKD+KFHEEF YIDG+EYPRKIVS DGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWMTSSSLAYIYGKDEKFHEEFQYIDGREYPRKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMGRCWYLSKQGIVGLKSERGEGVGVE 600
           SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMG C                      
Sbjct: 541 SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMG-C---------------------- 600

Query: 601 GGFLDGHLLDTMTFLDALPAFRMKQWQ-------------------------------VL 660
                  LLDTMTFLDALPAFR KQWQ                               VL
Sbjct: 601 -------LLDTMTFLDALPAFRTKQWQVIVLLFIEALSVCRIPSLDSQVSHSRSLFHKVL 660

Query: 661 DRAQIRPDEFELMKDHILPLGRTAQFSVENDA 662
           DRAQIR DE+E +KDHILPLGRTAQF  ENDA
Sbjct: 661 DRAQIRSDEYETLKDHILPLGRTAQFPGENDA 662

[Close]
BLAST of HG10002132 vs. ExPASy Swiss-Prot
Match: F4K1B1 (Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g26760 PE=2 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 4.4e-105
Identity = 288/789 (36.50%), Postives = 388/789 (49.18%), Query Frame = 0 

Query: 1   MAK-NQSVLIKETVFKLQLALLEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPL 60
           MAK N+++ I + V KLQL +LE   ++NQLFAA  LMSRSDYEDVVTER+IA LCGY L
Sbjct: 1   MAKDNEAIAINDAVHKLQLYMLENTTDQNQLFAARKLMSRSDYEDVVTERAIAKLCGYTL 60

Query: 61  CHSNLSSDNTRKGRYRISLKEHKVYDLQETYKYCSSTCLINSRAFSGRLQDERCSVMNPE 120
           C   L SD +R+G+YRISLK+HKVYDLQET K+CS+ CLI+S+ FSG LQ+ R    +  
Sbjct: 61  CQRFLPSDVSRRGKYRISLKDHKVYDLQETSKFCSAGCLIDSKTFSGSLQEARTLEFDSV 120

Query: 121 KLKETLRLFENLSLDSKEKMGNNSDLGLE---IQEKIDSNIGEVPIEDWMGPSNAIEGYV 180
           KL E L LF + SL+ K  +  N DL L    I+E       E+ +E WMGPSNA+EGYV
Sbjct: 121 KLNEILDLFGD-SLEVKGSLDVNKDLDLSKLMIKENFGVRGEELSLEKWMGPSNAVEGYV 180

Query: 181 PHSDHKIMTLPSKDGKESKDGSKAKSKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSGL 240
           P    K     S D K +   ++ K            +  FTST+I  +  SVSK+    
Sbjct: 181 PFDRSK----SSNDSKATTQSNQEK-----------HEMDFTSTVIMPDVNSVSKLPPQT 240

Query: 241 KEMSLDTNSKIQTGEFCVKESN---EQFTILETPHAPAPTKNNVGRKAKG-SKERTKV-- 300
           K+ S    S    G+  +KE         +          K   G    G ++E+T V  
Sbjct: 241 KQASTVVESVDGKGKTVLKEQTVVPPTKKVSRFRREKEKEKKTFGVDGMGCAQEKTTVLP 300

Query: 301 -------SATEESTKN-----------------------LSDAPSTSNQCNTNCNLMTE- 360
                  +  E+  KN                       +S  P  S + + +C L  + 
Sbjct: 301 RKILSFCNEIEKDFKNFGFDEMGLASSAMMSDGYGVEYSVSKQPQCSMEDSLSCKLKGDL 360

Query: 361 EPRGGSNDLSGTG----------------------------------------------- 420
           +   G N LSG+                                                
Sbjct: 361 QTLDGKNTLSGSSSGSNTKGSKTKPEKSRKKIISVEYHANSYEDGEEILAAESYERHKAQ 420

Query: 421 ---------IKSSLKQPGKKNLRRSVTWADEKTDDTSIINPPEVREMGKTKECSRITNNL 480
                     KS LK  G K L RSVTWAD+      +    EVR        S  +N++
Sbjct: 421 DVCSSSEIVTKSCLKISGSKKLSRSVTWADQNDGRGDLC---EVRNNDNAAGPSLSSNDI 480

Query: 481 VNSDNDNEDLLRFESAEACAMALSQAAEAITSGKNEVSDAVSEAGIIILPR----PSDAN 540
                D   L R   AEA A ALSQAAEA++SG ++ SDA ++AGII+LP       +  
Sbjct: 481 ----EDVNSLSRLALAEALATALSQAAEAVSSGNSDASDATAKAGIILLPSTHQLDEEVT 540

Query: 541 EEASTNPVNAFEPHSLSEKSNKLGELRSDLFDPNDSWYDAPPEGFSLTLSSFATMWMAIF 600
           EE S   +   EP +L +  NK G   SDLFD + SW+D PPEGF+LTLS+FA MW ++F
Sbjct: 541 EEHSEEEMTEEEP-TLLKWPNKPGIPDSDLFDRDQSWFDGPPEGFNLTLSNFAVMWDSLF 600

Query: 601 AWITSSSLAYIYGKDDKFHEEFLYIDGKEYPRKIVSTDGRSSEIKQTLAGCLTRSIPGLA 660
            W++SSSLAYIYGK++  HEEFL ++GKEYPR+I+  DG SSEIKQT+AGCL R++P + 
Sbjct: 601 GWVSSSSLAYIYGKEESAHEEFLLVNGKEYPRRIIMVDGLSSEIKQTIAGCLARALPRVV 660

Query: 661 SELKLSTPISSLEHGMGRCWYLSKQGIVGLKSERGEGVGVEGGFLDGHLLDTMTFLDALP 662
           + L+L   IS LE G+                              G LL+TM+   A+P
Sbjct: 661 THLRLPIAISELEKGL------------------------------GSLLETMSLTGAVP 720

[Close]
BLAST of HG10002132 vs. ExPASy Swiss-Prot
Match: A2Y040 (Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Oryza sativa subsp. indica OX=39946 GN=OsI_18345 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 8.9e-82
Identity = 250/763 (32.77%), Postives = 361/763 (47.31%), Query Frame = 0 

Query: 2   AKNQSVLIKETVFKLQLALLEG--IQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPL 61
           A+ +   +   V ++Q+AL +G     E  L AA SL+S  DY DVVTERSIA+ CGYP 
Sbjct: 11  ARMKPTTVASAVHRVQMALYDGAAASREPLLRAAASLLSGPDYADVVTERSIADACGYPA 70

Query: 62  CHSNLSSDNTR---KGRYRISLKEHKVYDLQETYKYCSSTCLINSRAFSGRLQDERCSVM 121
           C + L S++ R     R+RISL+EH+VYDL+E  K+CS  CL+ S AF   L  +R   +
Sbjct: 71  CPNPLPSEDARGKAAPRFRISLREHRVYDLEEARKFCSERCLVASAAFGASLPPDRPFGV 130

Query: 122 NPEKLKETLRLFE---------------NLSLDSKEKMGNNSDLGLEIQEKIDSNIGEVP 181
           +P++L   + LFE                 S D KE         +EI EK  +  GEV 
Sbjct: 131 SPDRLDALVALFEGGGGGGGDGGLALGFGASGDGKEVEEGRK---VEIMEKEAAGTGEVT 190

Query: 182 IEDWMGPSNAIEGYVPHSDHKIMTLPSKDGKESKDGSKAKSKPLGGGKDFFSDFSFTSTI 241
           +++W+GPS+AIEGYVP  D +++  P K+ K++   S  +S  +    D  +  S  S +
Sbjct: 191 LQEWIGPSDAIEGYVPRRD-RVVGGPKKEAKQNDACSAEQSSNI--NVDSRNASSGESGM 250

Query: 242 ITDEEYSVSK---ISSGLKEMSLDTNSKIQTGEFCVKES---NEQFTILETPHAPAPTKN 301
           +  E     K     + LK    D ++ + +   C+ +S     +  +LE        K 
Sbjct: 251 VLTENTKAKKKEATKTPLKMFKQDEDNDMLSS--CISDSIVKQLEDVVLEEKKDKKKNKA 310

Query: 302 NVGRKAKGSKERTKVSATEE-------STKNLSDAPS------TSNQCNTNCNLM-TEEP 361
             G    G  +  K     +       ST  + D  S         Q N + +++  E+P
Sbjct: 311 AKGTSRVGKSKPAKRPVGRDGHEVDFTSTIIMGDHGSEMMDHGALGQYNFSSSILANEQP 370

Query: 362 RGG------------------------------SNDLSGTGIKSSLKQPGKKNLRRSVTW 421
                                            S+D     ++SSLK  G KN  RSV W
Sbjct: 371 SSSQYAAIDSVQAYTEELDELFSNAVNIAKDETSDDSGRCTLRSSLKAVGSKNAGRSVKW 430

Query: 422 ADEKTDDTSIINPPEVREMGKTKECSR-ITNNLVNSDNDNEDLLRFESAEACAMALSQAA 481
           ADE                G   E SR   ++   S    +  +R ESAEACA AL +AA
Sbjct: 431 ADEN---------------GSVLETSRAFVSHSSKSQESMDSSVRRESAEACAAALIEAA 490

Query: 482 EAITSGKNEVSDAVSEAGIIILP---------RPSDANEEASTNPVNAFEPHSLSEKSNK 541
           EAI+SG +EV DAVS+AGIIILP            D +++A  N +   +   + +   K
Sbjct: 491 EAISSGTSEVEDAVSKAGIIILPDMVNQQQYNNDYDNDKDAGENEIFEID-RGVVKWPKK 550

Query: 542 LGELRSDLFDPNDSWYDAPPEGFSLTLSSFATMWMAIFAWITSSSLAYIYGKDDKFHEEF 601
              L +D+FD +DSW+D PPEGFSLTLSSFATMW A+F W++ SSLAY+YG D+   E+ 
Sbjct: 551 TVLLDTDMFDVDDSWHDTPPEGFSLTLSSFATMWAALFGWVSRSSLAYVYGLDESSMEDL 610

Query: 602 LYIDGKEYPRKIVSTDGRSSEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMGRCWYL 655
           L   G+E P+K V  DG SSEI++ L  C+  ++P L S L++  P+S LE  +      
Sbjct: 611 LIAGGRECPQKRVLNDGHSSEIRRALDTCVCNALPVLVSNLRMQIPVSKLEITL------ 670

[Close]
BLAST of HG10002132 vs. ExPASy Swiss-Prot
Match: Q6AVZ9 (Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0134300 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.6e-81
Identity = 249/763 (32.63%), Postives = 360/763 (47.18%), Query Frame = 0 

Query: 2   AKNQSVLIKETVFKLQLALLEG--IQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPL 61
           A+ +   +   V ++Q+AL +G     E  L AA SL+S  DY DVVTERSIA+ CGYP 
Sbjct: 11  ARMKPTTVASAVHRVQMALYDGAAASREPLLRAAASLLSGPDYADVVTERSIADACGYPA 70

Query: 62  CHSNLSSDNTR---KGRYRISLKEHKVYDLQETYKYCSSTCLINSRAFSGRLQDERCSVM 121
           C + L S++ R     R+RISL+EH+VYDL+E  K+CS  CL+ S AF   L  +R   +
Sbjct: 71  CPNPLPSEDARGKAAPRFRISLREHRVYDLEEARKFCSERCLVASAAFGASLPPDRPFGV 130

Query: 122 NPEKLKETLRLFE---------------NLSLDSKEKMGNNSDLGLEIQEKIDSNIGEVP 181
           +P++L   + LFE                 S D KE         +EI EK  +  GEV 
Sbjct: 131 SPDRLDALVALFEGGGGGGDDGGLALGFGASGDGKEVEEGRK---VEIMEKEAAGTGEVT 190

Query: 182 IEDWMGPSNAIEGYVPHSDHKIMTLPSKDGKESKDGSKAKSKPLGGGKDFFSDFSFTSTI 241
           +++W+GPS+AIEGYVP  D +++  P K+ K++   S  +S  +    D  +  S  S +
Sbjct: 191 LQEWIGPSDAIEGYVPRRD-RVVGGPKKEAKQNDACSAEQSSNI--NVDSRNASSGESGM 250

Query: 242 ITDEEYSVSK---ISSGLKEMSLDTNSKIQTGEFCVKES---NEQFTILETPHAPAPTKN 301
           +  E     K     + LK    D ++ + +   C+ +S     +  +LE        K 
Sbjct: 251 VLTENTKAKKKEATKTPLKMFKQDEDNDMLSS--CISDSIVKQLEDVVLEEKKDKKKNKA 310

Query: 302 NVGRKAKGSKERTKVSATEE-------STKNLSDAPS------TSNQCNTNCNLM-TEEP 361
             G    G  +  K     +       ST  + D  S         Q N + +++  E+P
Sbjct: 311 AKGTSRVGKSKPAKRPVGRDGHEVDFTSTIIMGDRGSEMMDHGALGQYNFSSSILANEQP 370

Query: 362 RGG------------------------------SNDLSGTGIKSSLKQPGKKNLRRSVTW 421
                                            S+D     ++SSLK  G KN   SV W
Sbjct: 371 SSSQYAAIDSVQAYTEELDELFSNAVNIAKDETSDDSGRCTLRSSLKAVGSKNAGHSVKW 430

Query: 422 ADEKTDDTSIINPPEVREMGKTKECSR-ITNNLVNSDNDNEDLLRFESAEACAMALSQAA 481
           ADE                G   E SR   ++   S    +  +R ESAEACA AL +AA
Sbjct: 431 ADEN---------------GSVLETSRAFVSHSSKSQESMDSSVRRESAEACAAALIEAA 490

Query: 482 EAITSGKNEVSDAVSEAGIIILP---------RPSDANEEASTNPVNAFEPHSLSEKSNK 541
           EAI+SG +EV DAVS+AGIIILP            D +++A  N +   +   + +   K
Sbjct: 491 EAISSGTSEVEDAVSKAGIIILPDMVNQQQYNNDYDNDKDAGENEIFEID-RGVVKWPKK 550

Query: 542 LGELRSDLFDPNDSWYDAPPEGFSLTLSSFATMWMAIFAWITSSSLAYIYGKDDKFHEEF 601
              L +D+FD +DSW+D PPEGFSLTLSSFATMW A+F W++ SSLAY+YG D+   E+ 
Sbjct: 551 TVLLDTDMFDVDDSWHDTPPEGFSLTLSSFATMWAALFGWVSRSSLAYVYGLDESSMEDL 610

Query: 602 LYIDGKEYPRKIVSTDGRSSEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMGRCWYL 655
           L   G+E P+K V  DG SSEI++ L  C+  ++P L S L++  P+S LE  +      
Sbjct: 611 LIAGGRECPQKRVLNDGHSSEIRRALDTCVCNALPVLVSNLRMQIPVSKLEITL------ 670

[Close]
BLAST of HG10002132 vs. ExPASy Swiss-Prot
Match: Q8IXW5 (Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 OS=Homo sapiens OX=9606 GN=RPAP2 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.6e-09
Identity = 106/450 (23.56%), Postives = 185/450 (41.11%), Query Frame = 0 

Query: 20  LLEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLCHSNLSSDNTRKGRYRISLK 79
           LLE    E  L   G  ++ + Y DVV ERSI  LCGYPLC   L      K +Y+IS K
Sbjct: 65  LLEENITEEFLMECGRFITPAHYSDVVDERSIVKLCGYPLCQKKLGI--VPKQKYKISTK 124

Query: 80  EHKVYDLQETYKYCSSTCLINSRAFSGRL--------QDERCSVMNPEKLKETLRLFENL 139
            +KVYD+ E   +CS+ C   S+ F  ++        ++ER       K +++    E +
Sbjct: 125 TNKVYDITERKSFCSNFCYQASKFFEAQIPKTPVWVREEERHPDFQLLKEEQSGHSGEEV 184

Query: 140 SLDSKEKMGNNSDLGLEIQEKIDSNIGEVPIEDWMG-----PSNAIEGYVPHSDHKIMTL 199
            L SK    ++ D     +++ +S+      +          S+ + G  P+S +    L
Sbjct: 185 QLCSKAIKTSDIDNPSHFEKQYESSSSSTHSDSSSDNEQDFVSSILPGNRPNSTNIRPQL 244

Query: 200 PSKDGKESKDGSKAKSKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSGLKEMSLDTNSK 259
             K   + K G KA SK                    D+E +V  ++  L +  LD+  K
Sbjct: 245 HQKSIMKKKAGHKANSKH------------------KDKEQTVVDVTEQLGDCKLDSQEK 304

Query: 260 IQTGEFCVKESNEQFTILET-PHAPAPTKNNVGRKAKGSKERTKVSATEESTKNLSDAPS 319
             T E  +++ N Q +   T P     ++N+    ++   E T V  +++S ++     +
Sbjct: 305 DATCELPLQKVNTQSSSNSTLPERLKASENSESEYSR--SEITLVGISKKSAEHFKRKFA 364

Query: 320 TSNQCNTNCNLMTEEPRGGSNDLSGTGIKSSLK---QPGKKNLRRSV--TWADEKTDDTS 379
            SNQ + +                   + SS++   + GK+NL + +  T  + KT++T 
Sbjct: 365 KSNQVSRS-------------------VSSSVQVCPEVGKRNLLKVLKETLIEWKTEETL 424

Query: 380 IINPPEVREMGKTKECSRITNNLVNSDNDNEDLLRFESAEACAMALSQAAEAITSGKNEV 439
                 +        C +   +LV  + D +D++    +   A   SQ         N +
Sbjct: 425 RF----LYGQNYASVCLKPEASLVKEELDEDDIISDPDSHFPAWRESQ---------NSL 460

Query: 440 SDAV--SEAGIIILPRPSDANEEASTNPVN 449
            +++    +G  I P PS  N +  T  +N
Sbjct: 485 DESLPFRGSGTAIKPLPSYENLKKETEKLN 460

[Close]
BLAST of HG10002132 vs. ExPASy Swiss-Prot
Match: Q5RA37 (Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 OS=Pongo abelii OX=9601 GN=RPAP2 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.4e-09
Identity = 106/450 (23.56%), Postives = 184/450 (40.89%), Query Frame = 0 

Query: 20  LLEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLCHSNLSSDNTRKGRYRISLK 79
           LLE    E  L   G  ++ + Y DVV ERSI  LCGYPLC   L      K +Y+IS K
Sbjct: 65  LLEENITEEFLMECGKFITPAHYSDVVDERSIVKLCGYPLCQKKLGI--VPKQKYKISTK 124

Query: 80  EHKVYDLQETYKYCSSTCLINSRAFSGRL--------QDERCSVMNPEKLKETLRLFENL 139
            +KVYD+ E   +CS+ C   S+ F  ++        ++ER       K +++    E +
Sbjct: 125 TNKVYDITERKSFCSNFCYQASKFFEAQIPKTPVWVREEERHPDFQLLKEQQSGHSGEEV 184

Query: 140 SLDSKEKMGNNSDLGLEIQEKIDSNIGEVPIEDWMG-----PSNAIEGYVPHSDHKIMTL 199
            L SK    ++ D     +++ +S+      +          S+ + G  P+S      L
Sbjct: 185 QLCSKAIKTSDIDNPSHFEKQYESSSSSTHSDSSSDNEQDFVSSILPGNRPNSTSIRPQL 244

Query: 200 PSKDGKESKDGSKAKSKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSGLKEMSLDTNSK 259
             K   + K G KA SK                    D+E +V  ++  L +  LD+  K
Sbjct: 245 HQKSIMKKKAGHKANSKH------------------KDKEQTVIDVTEQLGDCKLDSQEK 304

Query: 260 IQTGEFCVKESNEQFTILET-PHAPAPTKNNVGRKAKGSKERTKVSATEESTKNLSDAPS 319
             T E  +++ N Q +   T P     ++N+    ++   E T V  +++S ++     +
Sbjct: 305 DATCELPLQKVNTQSSSNSTLPERLKASENSESEYSR--SEITLVGISKKSAEHFKRKFA 364

Query: 320 TSNQCNTNCNLMTEEPRGGSNDLSGTGIKSSLK---QPGKKNLRRSV--TWADEKTDDTS 379
            SNQ + +                   + SS++   + GK+NL + +  T  + KT++T 
Sbjct: 365 KSNQVSRS-------------------VSSSVQVCPEVGKRNLLKILKETLIEWKTEETL 424

Query: 380 IINPPEVREMGKTKECSRITNNLVNSDNDNEDLLRFESAEACAMALSQAAEAITSGKNEV 439
                 +        C +   +LV  + D +D++    +   A   SQ         N +
Sbjct: 425 RF----LYGQNYASVCLKPEASLVKEELDEDDIISDPDSHFPAWRESQ---------NSL 460

Query: 440 SDAV--SEAGIIILPRPSDANEEASTNPVN 449
            +++    +G  I P PS  N +  T  +N
Sbjct: 485 DESLPFRGSGTAIKPLPSYENLKKETEKLN 460

[Close]
BLAST of HG10002132 vs. ExPASy TrEMBL
Match: A0A0A0KVU3 (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucumis sativus OX=3659 GN=Csa_4G009360 PE=3 SV=1)

HSP 1 Score: 1059.3 bits (2738), Expect = 6.6e-306
Identity = 557/692 (80.49%), Postives = 590/692 (85.26%), Query Frame = 0 

Query: 1   MAKNQSVLIKETVFKLQLALLEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60
           MAKNQSVLIK+TV+KLQLAL EGI+NENQLFAAGSLMSRSDYEDVVTERSIA+LCGYPLC
Sbjct: 1   MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC 60

Query: 61  HSNLSSDNTRKGRYRISLKEHKVYDLQETYKYCSSTCLINSRAFSGRLQDERCSVMNPEK 120
           HSNL SDNTR+GRYRISLKEHKVYDL+ETYKYCSS CLINSRAFSGRLQDERCSVMNP+K
Sbjct: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPDK 120

Query: 121 LKETLRLFENLSLDSKEKMGNNSDLGLEIQEKIDSNIGEVPIEDWMGPSNAIEGYVPHSD 180
           LKE L+LFEN+SLDSKE MGNN D GLEIQEKI+SNIGEVPIE+WMGPSNAIEGYVPH D
Sbjct: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESNIGEVPIEEWMGPSNAIEGYVPHRD 180

Query: 181 HKIMTLPSKDGKESKDGSKAKSKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSGLKEMS 240
           HK+MTL SKDGKESKDGSKAK KPLGGGKDFFSDFS TSTIITDEEYSVSKISSGLKEM+
Sbjct: 181 HKVMTLHSKDGKESKDGSKAKIKPLGGGKDFFSDFSITSTIITDEEYSVSKISSGLKEMA 240

Query: 241 LDTNSKIQTGEFCVKESNEQFTILETPHAPAPTKNNVGRKAKGSKERTKVSATEESTKNL 300
           LDTNSK QTGEFC KESN+QF ILETPHAPAP KN+VGRKA+GSKERTKVSAT+EST NL
Sbjct: 241 LDTNSKNQTGEFCGKESNDQFAILETPHAPAPPKNSVGRKARGSKERTKVSATKESTDNL 300

Query: 301 SDAPSTSNQCNTNCNLMTEEPRGGSNDLSGTGIKSSLKQPGKKNLRRSVTWADEKTDDTS 360
           SDAPSTS   +TN NLMTEEPRGG NDLSGT +KSSLK+PGKKNL RSVTWADEKTDD S
Sbjct: 301 SDAPSTSKNRSTNFNLMTEEPRGGFNDLSGTELKSSLKKPGKKNLCRSVTWADEKTDDAS 360

Query: 361 IINPPEVREMGKTKECSRITNNLVNSDNDNEDLLRFESAEACAMALSQAAEAITSGKNEV 420
           I+N PEV EMGKTKECSR T+NLVN DNDNED+LR ESAEACAMALSQAAEAITSG++EV
Sbjct: 361 IMNLPEVGEMGKTKECSRTTSNLVNFDNDNEDILRVESAEACAMALSQAAEAITSGQSEV 420

Query: 421 SDAVSEAGIIILPRPSDANEEASTNPVNAFEPHSLSEKSNKLGELRSDLFDPNDSWYDAP 480
           SDAVSEAGIIILP PSDANEEAST+PVNA EPHS SEKSNKLG LRSDLFDP+DSWYDAP
Sbjct: 421 SDAVSEAGIIILPHPSDANEEASTDPVNASEPHSFSEKSNKLGVLRSDLFDPSDSWYDAP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWITSSSLAYIYGKDDKFHEEFLYIDGKEYPRKIVSTDGRS 540
           PEGFSLTLSSFATMWMAIFAW+TSSSLAYIYGKDDKFHEEFLYIDGKEYP KIVS DGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFLYIDGKEYPSKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMGRCWYLSKQGIVGLKSERGEGVGVE 600
           SEIKQTLAGCLTR+IPGLASEL LSTPIS LE+GM                         
Sbjct: 541 SEIKQTLAGCLTRAIPGLASELNLSTPISRLENGM------------------------- 600

Query: 601 GGFLDGHLLDTMTFLDALPAFRMKQWQ-------------------------------VL 660
                 HLLDTMTFLDALPAFRMKQWQ                               VL
Sbjct: 601 -----AHLLDTMTFLDALPAFRMKQWQVIVLLFIEALSVSRIPSLASHMSSSRNLYHKVL 660

Query: 661 DRAQIRPDEFELMKDHILPLGRTAQFSVENDA 662
           DRAQIR DE+E+M+DHILPLGRTAQ S ENDA
Sbjct: 661 DRAQIRSDEYEIMRDHILPLGRTAQLSDENDA 662

[Close]
BLAST of HG10002132 vs. ExPASy TrEMBL
Match: A0A1S3BXZ9 (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucumis melo OX=3656 GN=LOC103494620 PE=3 SV=1)

HSP 1 Score: 1047.0 bits (2706), Expect = 3.4e-302
Identity = 555/692 (80.20%), Postives = 584/692 (84.39%), Query Frame = 0 

Query: 1   MAKNQSVLIKETVFKLQLALLEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60
           MAKNQS LIK+TV+KLQLAL EGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC
Sbjct: 1   MAKNQSALIKDTVYKLQLALYEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60

Query: 61  HSNLSSDNTRKGRYRISLKEHKVYDLQETYKYCSSTCLINSRAFSGRLQDERCSVMNPEK 120
           HSNL SDNTR+GRYRISLKEHKVYDL+ETYKYCSS CLINSRAFSGRLQDERCSVMNP K
Sbjct: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPAK 120

Query: 121 LKETLRLFENLSLDSKEKMGNNSDLGLEIQEKIDSNIGEVPIEDWMGPSNAIEGYVPHSD 180
           LKE L+LFEN+SLDSKE MGNN D GLEIQEKI+S+IGEVPIE+WMGPSNAIEGYVPH D
Sbjct: 121 LKEILKLFENMSLDSKENMGNNCDSGLEIQEKIESSIGEVPIEEWMGPSNAIEGYVPHRD 180

Query: 181 HKIMTLPSKDGKESKDGSKAKSKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSGLKEMS 240
           HKIMTLPSKDGKESKDGS AK KPLGGGKDFFSDFSFTSTIITDEEYSVSKISS LKEM+
Sbjct: 181 HKIMTLPSKDGKESKDGSTAKIKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSSLKEMA 240

Query: 241 LDTNSKIQTGEFCVKESNEQFTILETPHAPAPTKNNVGRKAKGSKERTKVSATEESTKNL 300
           LDTNSKIQTGEFC KESN+QFTILET HA AP KN+VG KA+GSKERTKVSATEEST NL
Sbjct: 241 LDTNSKIQTGEFCGKESNDQFTILETSHARAPPKNSVGHKARGSKERTKVSATEESTNNL 300

Query: 301 SDAPSTSNQCNTNCNLMTEEPRGGSNDLSGTGIKSSLKQPGKKNLRRSVTWADEKTDDTS 360
           SDAPSTSN  +TN NL+TEEP+GG NDL GT IKSSLKQPGKKNLRRSVTWADEK DDTS
Sbjct: 301 SDAPSTSNNRSTNFNLVTEEPKGGFNDLRGTEIKSSLKQPGKKNLRRSVTWADEKIDDTS 360

Query: 361 IINPPEVREMGKTKECSRITNNLVNSDNDNEDLLRFESAEACAMALSQAAEAITSGKNEV 420
            +N PEV E GKTKECSRIT+NLVN DNDNEDL+R ESAEACAMALSQAAEAITSG++EV
Sbjct: 361 -MNLPEVGEKGKTKECSRITSNLVNFDNDNEDLIRVESAEACAMALSQAAEAITSGQSEV 420

Query: 421 SDAVSEAGIIILPRPSDANEEASTNPVNAFEPHSLSEKSNKLGELRSDLFDPNDSWYDAP 480
           S+AVSEAGIIILP PSDANEEAST PV A EPHS SEKSNKLG L SDLFDP+DSWYDAP
Sbjct: 421 SEAVSEAGIIILPHPSDANEEASTEPVKASEPHSFSEKSNKLGVLHSDLFDPSDSWYDAP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWITSSSLAYIYGKDDKFHEEFLYIDGKEYPRKIVSTDGRS 540
           PEGFSLTLSSFATMWMAIFAW+TSSSLAYIYGKDDKFHEEF YIDGKEYP KIVS DGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFQYIDGKEYPSKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMGRCWYLSKQGIVGLKSERGEGVGVE 600
           SEIKQTLAGCLTR+IPGLASELKLSTPIS LE+GM                         
Sbjct: 541 SEIKQTLAGCLTRAIPGLASELKLSTPISRLEYGM------------------------- 600

Query: 601 GGFLDGHLLDTMTFLDALPAFRMKQWQ-------------------------------VL 660
                 HLLDTMTFLDALPAFRMKQWQ                               VL
Sbjct: 601 -----AHLLDTMTFLDALPAFRMKQWQVIVLLFMEALSVCRIPSLASHMSSSRNLYHKVL 660

Query: 661 DRAQIRPDEFELMKDHILPLGRTAQFSVENDA 662
           DRAQI+ DE+E+MKDHILPLG TAQ SVENDA
Sbjct: 661 DRAQIQSDEYEIMKDHILPLGLTAQLSVENDA 661

[Close]
BLAST of HG10002132 vs. ExPASy TrEMBL
Match: A0A5A7TQX7 (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002560 PE=3 SV=1)

HSP 1 Score: 1043.5 bits (2697), Expect = 3.8e-301
Identity = 552/692 (79.77%), Postives = 585/692 (84.54%), Query Frame = 0 

Query: 1   MAKNQSVLIKETVFKLQLALLEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60
           MAKNQS LIK+TV+KLQLAL EGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC
Sbjct: 1   MAKNQSALIKDTVYKLQLALYEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60

Query: 61  HSNLSSDNTRKGRYRISLKEHKVYDLQETYKYCSSTCLINSRAFSGRLQDERCSVMNPEK 120
           HSNL SDNTR+GRYRISLKEHKVYDL+ETYKYCSS CLINSRAFSGRLQDERCSVMNP K
Sbjct: 61  HSNLPSDNTRRGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPAK 120

Query: 121 LKETLRLFENLSLDSKEKMGNNSDLGLEIQEKIDSNIGEVPIEDWMGPSNAIEGYVPHSD 180
           LK+ L+LFEN+SLDSKE +GNN D GLEIQEKI+S+IGEVPIE+WMGPSNAIEGYVPH D
Sbjct: 121 LKDILKLFENMSLDSKENVGNNCDSGLEIQEKIESSIGEVPIEEWMGPSNAIEGYVPHRD 180

Query: 181 HKIMTLPSKDGKESKDGSKAKSKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSGLKEMS 240
           HKIMTLPSKDGKESKDGS AK KPLGGGKDFFSDFSFTSTIITDEEYSVSKISS LKEM+
Sbjct: 181 HKIMTLPSKDGKESKDGSTAKIKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSSLKEMA 240

Query: 241 LDTNSKIQTGEFCVKESNEQFTILETPHAPAPTKNNVGRKAKGSKERTKVSATEESTKNL 300
           LDTNSKIQTGEFC KESN+QFTILET HA AP KN+VG KA+GSKERTKVSATEEST NL
Sbjct: 241 LDTNSKIQTGEFCGKESNDQFTILETSHARAPPKNSVGHKARGSKERTKVSATEESTNNL 300

Query: 301 SDAPSTSNQCNTNCNLMTEEPRGGSNDLSGTGIKSSLKQPGKKNLRRSVTWADEKTDDTS 360
           SDAPSTSN  +TN NL+TEEP+GG NDL GT IKSSLKQPGKKNLRRSVTWADEK DDTS
Sbjct: 301 SDAPSTSNNRSTNFNLVTEEPKGGFNDLRGTEIKSSLKQPGKKNLRRSVTWADEKIDDTS 360

Query: 361 IINPPEVREMGKTKECSRITNNLVNSDNDNEDLLRFESAEACAMALSQAAEAITSGKNEV 420
            +N PEV E GKTKECSRIT+NLVN DNDNEDLLR ESAEACAMALSQAAEAITSG++EV
Sbjct: 361 -MNLPEVGEKGKTKECSRITSNLVNFDNDNEDLLRVESAEACAMALSQAAEAITSGQSEV 420

Query: 421 SDAVSEAGIIILPRPSDANEEASTNPVNAFEPHSLSEKSNKLGELRSDLFDPNDSWYDAP 480
           S+AVSEAGIIILP PSDANEEAST+PV A EPHS SEKSNKLG L SDLFDP++SWYDAP
Sbjct: 421 SEAVSEAGIIILPHPSDANEEASTDPVKASEPHSFSEKSNKLGVLHSDLFDPSESWYDAP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWITSSSLAYIYGKDDKFHEEFLYIDGKEYPRKIVSTDGRS 540
           PEGFSLTLSSFATMWMAIFAW+TSSSLAYIYGKDDKFHEEF YIDGKEYP KIVS DGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWVTSSSLAYIYGKDDKFHEEFQYIDGKEYPSKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMGRCWYLSKQGIVGLKSERGEGVGVE 600
           SEIKQTLAGCLTR+IPGLASELKLSTP+S LE+GM                         
Sbjct: 541 SEIKQTLAGCLTRAIPGLASELKLSTPVSRLEYGM------------------------- 600

Query: 601 GGFLDGHLLDTMTFLDALPAFRMKQWQ-------------------------------VL 660
                 HLLDTMTFLDALPAFRMKQWQ                               VL
Sbjct: 601 -----AHLLDTMTFLDALPAFRMKQWQVIVLLFIEALSVCRIPSLASHMSSSRNLYHKVL 660

Query: 661 DRAQIRPDEFELMKDHILPLGRTAQFSVENDA 662
           DRAQI+ DE+E+MKDHILPLG TAQ SVENDA
Sbjct: 661 DRAQIQSDEYEIMKDHILPLGLTAQLSVENDA 661

[Close]
BLAST of HG10002132 vs. ExPASy TrEMBL
Match: A0A6J1GWL9 (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111457827 PE=3 SV=1)

HSP 1 Score: 1038.5 bits (2684), Expect = 1.2e-299
Identity = 549/692 (79.34%), Postives = 580/692 (83.82%), Query Frame = 0 

Query: 1   MAKNQSVLIKETVFKLQLALLEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60
           MAKNQ++LIK+TV+KLQLALL+GI NENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC
Sbjct: 1   MAKNQTILIKDTVYKLQLALLDGIHNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60

Query: 61  HSNLSSDNTRKGRYRISLKEHKVYDLQETYKYCSSTCLINSRAFSGRLQDERCSVMNPEK 120
            SNL SDNTRKGRYRISLKEHKVYDL+ETYKYCSSTCLINSRAFSGRLQDERCSVMNP K
Sbjct: 61  QSNLPSDNTRKGRYRISLKEHKVYDLEETYKYCSSTCLINSRAFSGRLQDERCSVMNPGK 120

Query: 121 LKETLRLFENLSLDSKEKMGNNSDLGLEIQEKIDSNIGEVPIEDWMGPSNAIEGYVPHSD 180
           LKE LRLFENLSLDSKE   N+ DLGLEIQEKI+S+IGEVPIE+WMGPSNAIEGYVPH +
Sbjct: 121 LKEILRLFENLSLDSKENTRNSCDLGLEIQEKIESSIGEVPIEEWMGPSNAIEGYVPHRN 180

Query: 181 HKIMTLPSKDGKESKDGSKAKSKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSGLKEMS 240
           H IMT P KDGKE KDGSKAK K LG GKDFFSDFSF +T+ITDEEYSVSKISSGLKEM+
Sbjct: 181 HNIMTSPRKDGKELKDGSKAKIKQLGVGKDFFSDFSFATTVITDEEYSVSKISSGLKEMT 240

Query: 241 LDTNSKIQTGEFCVKESNEQFTILETPHAPAPTKNNVGRKAKGSKERTKVSATEESTKNL 300
            DT SK QTGEFC K+SNEQFTILETPH PAPTKN+VGRKA+GSKERT VSAT ES  NL
Sbjct: 241 FDTKSKAQTGEFCGKQSNEQFTILETPHGPAPTKNSVGRKARGSKERTNVSATAESNNNL 300

Query: 301 SDAPSTSNQCNTNCNLMTEEPRGGSNDLSGTGIKSSLKQPGKKNLRRSVTWADEKTDDTS 360
           SDAPSTSN C+TNCN+ TEEP GGSNDL+ T IKSSLKQPGKKNLRRSVTWAD KTD+TS
Sbjct: 301 SDAPSTSNHCSTNCNITTEEPNGGSNDLNETQIKSSLKQPGKKNLRRSVTWADAKTDETS 360

Query: 361 IINPPEVREMGKTKECSRITNNLVNSDNDNEDLLRFESAEACAMALSQAAEAITSGKNEV 420
           IIN PE REMGKTKECSR+T+NLVN+DN NED+LR ESAEACAMALSQAAEAITSGKNEV
Sbjct: 361 IINLPEDREMGKTKECSRMTSNLVNADNGNEDILRVESAEACAMALSQAAEAITSGKNEV 420

Query: 421 SDAVSEAGIIILPRPSDANEEASTNPVNAFEPHSLSEKSNKLGELRSDLFDPNDSWYDAP 480
           SDAVSEAGIIILPRPSDANEEASTN  N  EPHS SEKSNK G LRSDLFDPNDSWYD+P
Sbjct: 421 SDAVSEAGIIILPRPSDANEEASTNGENISEPHSSSEKSNKPGILRSDLFDPNDSWYDSP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWITSSSLAYIYGKDDKFHEEFLYIDGKEYPRKIVSTDGRS 540
           PEGFSLTLSSFATMWMAIFAW+TSSSLAYIYGKD+KFHEEF YIDG+EYPRKIVS DGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWMTSSSLAYIYGKDEKFHEEFQYIDGREYPRKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMGRCWYLSKQGIVGLKSERGEGVGVE 600
           SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMG C                      
Sbjct: 541 SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMG-C---------------------- 600

Query: 601 GGFLDGHLLDTMTFLDALPAFRMKQWQ-------------------------------VL 660
                  LLDTMTFLDALPAFR KQWQ                               VL
Sbjct: 601 -------LLDTMTFLDALPAFRTKQWQVIVLLFIEALSVCRIPSLDSQVSHSRSLFHKVL 660

Query: 661 DRAQIRPDEFELMKDHILPLGRTAQFSVENDA 662
           DRAQIR DE+E +KDHILPLGRTAQF  ENDA
Sbjct: 661 DRAQIRSDEYETLKDHILPLGRTAQFPGENDA 662

[Close]
BLAST of HG10002132 vs. ExPASy TrEMBL
Match: A0A6J1IY57 (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111479539 PE=3 SV=1)

HSP 1 Score: 1032.3 bits (2668), Expect = 8.7e-298
Identity = 545/692 (78.76%), Postives = 581/692 (83.96%), Query Frame = 0 

Query: 1   MAKNQSVLIKETVFKLQLALLEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60
           MAKNQ++LIK+TV+KLQLALL+GI NENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC
Sbjct: 1   MAKNQTILIKDTVYKLQLALLDGIHNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC 60

Query: 61  HSNLSSDNTRKGRYRISLKEHKVYDLQETYKYCSSTCLINSRAFSGRLQDERCSVMNPEK 120
            SNL SDNTRKGRYRISLKEHKVYDL+ETYKYCSSTCLINSRAFSGRLQDERCSVMNP K
Sbjct: 61  QSNLPSDNTRKGRYRISLKEHKVYDLEETYKYCSSTCLINSRAFSGRLQDERCSVMNPGK 120

Query: 121 LKETLRLFENLSLDSKEKMGNNSDLGLEIQEKIDSNIGEVPIEDWMGPSNAIEGYVPHSD 180
           LKE LRLFENLSLDSKE   N+ DLGLEIQEKI+S+IGEVPIE+WMGPSNAIEGYVPH +
Sbjct: 121 LKEILRLFENLSLDSKENTRNSCDLGLEIQEKIESSIGEVPIEEWMGPSNAIEGYVPHRN 180

Query: 181 HKIMTLPSKDGKESKDGSKAKSKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSGLKEMS 240
           H IMTLPSKDGKE KDGSKAK K LG  KDFFSDFSF ST+ITDEEYSVSKISSGLKEM+
Sbjct: 181 HNIMTLPSKDGKELKDGSKAKIKQLGVEKDFFSDFSFASTVITDEEYSVSKISSGLKEMT 240

Query: 241 LDTNSKIQTGEFCVKESNEQFTILETPHAPAPTKNNVGRKAKGSKERTKVSATEESTKNL 300
            DT SK QTGEFC K+SNEQFTILETPH PAPTKN+VGRKA+G+KERT VSAT ES  NL
Sbjct: 241 FDTKSKAQTGEFCGKQSNEQFTILETPHGPAPTKNSVGRKARGTKERTNVSATAESNNNL 300

Query: 301 SDAPSTSNQCNTNCNLMTEEPRGGSNDLSGTGIKSSLKQPGKKNLRRSVTWADEKTDDTS 360
           SD+PSTSN CNTNCN+ TEEP+GGSN+L+ T IKSSLKQPGKKNLRRSVTWAD KTD+TS
Sbjct: 301 SDSPSTSNHCNTNCNITTEEPKGGSNELNETQIKSSLKQPGKKNLRRSVTWADAKTDETS 360

Query: 361 IINPPEVREMGKTKECSRITNNLVNSDNDNEDLLRFESAEACAMALSQAAEAITSGKNEV 420
           IIN PE REMGKTKECSR+T+NLVN+DN NED+LR ESAEACAMALSQAAEAITSG+NEV
Sbjct: 361 IINLPEDREMGKTKECSRMTSNLVNADNGNEDMLRVESAEACAMALSQAAEAITSGQNEV 420

Query: 421 SDAVSEAGIIILPRPSDANEEASTNPVNAFEPHSLSEKSNKLGELRSDLFDPNDSWYDAP 480
           SDAVSEAGIIILPRPSDANEE STN  N  EP+S SEKSNK G L SDLFDP DSWYD+P
Sbjct: 421 SDAVSEAGIIILPRPSDANEEVSTNGKNISEPYSSSEKSNKPGILHSDLFDPEDSWYDSP 480

Query: 481 PEGFSLTLSSFATMWMAIFAWITSSSLAYIYGKDDKFHEEFLYIDGKEYPRKIVSTDGRS 540
           PEGFSLTLSSFATMWMAIFAW+TSSSLAYIYGKD+KFHEEF YIDG+EYPRKIVS DGRS
Sbjct: 481 PEGFSLTLSSFATMWMAIFAWMTSSSLAYIYGKDEKFHEEFQYIDGREYPRKIVSADGRS 540

Query: 541 SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMGRCWYLSKQGIVGLKSERGEGVGVE 600
           SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMG C                      
Sbjct: 541 SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMG-C---------------------- 600

Query: 601 GGFLDGHLLDTMTFLDALPAFRMKQWQ-------------------------------VL 660
                  LLDTMTFLDALPAFRMKQWQ                               VL
Sbjct: 601 -------LLDTMTFLDALPAFRMKQWQVIVLLFIEALSVCRIPSLDSQVSNSRSLFHKVL 660

Query: 661 DRAQIRPDEFELMKDHILPLGRTAQFSVENDA 662
           DRAQIR +E+E +KDHILPLGRTAQFS ENDA
Sbjct: 661 DRAQIRSNEYETLKDHILPLGRTAQFSGENDA 662

[Close]
BLAST of HG10002132 vs. TAIR 10
Match: AT5G26760.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF408 (InterPro:IPR007308); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 383.6 bits (984), Expect = 3.1e-106
Identity = 288/789 (36.50%), Postives = 388/789 (49.18%), Query Frame = 0 

Query: 1   MAK-NQSVLIKETVFKLQLALLEGIQNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPL 60
           MAK N+++ I + V KLQL +LE   ++NQLFAA  LMSRSDYEDVVTER+IA LCGY L
Sbjct: 1   MAKDNEAIAINDAVHKLQLYMLENTTDQNQLFAARKLMSRSDYEDVVTERAIAKLCGYTL 60

Query: 61  CHSNLSSDNTRKGRYRISLKEHKVYDLQETYKYCSSTCLINSRAFSGRLQDERCSVMNPE 120
           C   L SD +R+G+YRISLK+HKVYDLQET K+CS+ CLI+S+ FSG LQ+ R    +  
Sbjct: 61  CQRFLPSDVSRRGKYRISLKDHKVYDLQETSKFCSAGCLIDSKTFSGSLQEARTLEFDSV 120

Query: 121 KLKETLRLFENLSLDSKEKMGNNSDLGLE---IQEKIDSNIGEVPIEDWMGPSNAIEGYV 180
           KL E L LF + SL+ K  +  N DL L    I+E       E+ +E WMGPSNA+EGYV
Sbjct: 121 KLNEILDLFGD-SLEVKGSLDVNKDLDLSKLMIKENFGVRGEELSLEKWMGPSNAVEGYV 180

Query: 181 PHSDHKIMTLPSKDGKESKDGSKAKSKPLGGGKDFFSDFSFTSTIITDEEYSVSKISSGL 240
           P    K     S D K +   ++ K            +  FTST+I  +  SVSK+    
Sbjct: 181 PFDRSK----SSNDSKATTQSNQEK-----------HEMDFTSTVIMPDVNSVSKLPPQT 240

Query: 241 KEMSLDTNSKIQTGEFCVKESN---EQFTILETPHAPAPTKNNVGRKAKG-SKERTKV-- 300
           K+ S    S    G+  +KE         +          K   G    G ++E+T V  
Sbjct: 241 KQASTVVESVDGKGKTVLKEQTVVPPTKKVSRFRREKEKEKKTFGVDGMGCAQEKTTVLP 300

Query: 301 -------SATEESTKN-----------------------LSDAPSTSNQCNTNCNLMTE- 360
                  +  E+  KN                       +S  P  S + + +C L  + 
Sbjct: 301 RKILSFCNEIEKDFKNFGFDEMGLASSAMMSDGYGVEYSVSKQPQCSMEDSLSCKLKGDL 360

Query: 361 EPRGGSNDLSGTG----------------------------------------------- 420
           +   G N LSG+                                                
Sbjct: 361 QTLDGKNTLSGSSSGSNTKGSKTKPEKSRKKIISVEYHANSYEDGEEILAAESYERHKAQ 420

Query: 421 ---------IKSSLKQPGKKNLRRSVTWADEKTDDTSIINPPEVREMGKTKECSRITNNL 480
                     KS LK  G K L RSVTWAD+      +    EVR        S  +N++
Sbjct: 421 DVCSSSEIVTKSCLKISGSKKLSRSVTWADQNDGRGDLC---EVRNNDNAAGPSLSSNDI 480

Query: 481 VNSDNDNEDLLRFESAEACAMALSQAAEAITSGKNEVSDAVSEAGIIILPR----PSDAN 540
                D   L R   AEA A ALSQAAEA++SG ++ SDA ++AGII+LP       +  
Sbjct: 481 ----EDVNSLSRLALAEALATALSQAAEAVSSGNSDASDATAKAGIILLPSTHQLDEEVT 540

Query: 541 EEASTNPVNAFEPHSLSEKSNKLGELRSDLFDPNDSWYDAPPEGFSLTLSSFATMWMAIF 600
           EE S   +   EP +L +  NK G   SDLFD + SW+D PPEGF+LTLS+FA MW ++F
Sbjct: 541 EEHSEEEMTEEEP-TLLKWPNKPGIPDSDLFDRDQSWFDGPPEGFNLTLSNFAVMWDSLF 600

Query: 601 AWITSSSLAYIYGKDDKFHEEFLYIDGKEYPRKIVSTDGRSSEIKQTLAGCLTRSIPGLA 660
            W++SSSLAYIYGK++  HEEFL ++GKEYPR+I+  DG SSEIKQT+AGCL R++P + 
Sbjct: 601 GWVSSSSLAYIYGKEESAHEEFLLVNGKEYPRRIIMVDGLSSEIKQTIAGCLARALPRVV 660

Query: 661 SELKLSTPISSLEHGMGRCWYLSKQGIVGLKSERGEGVGVEGGFLDGHLLDTMTFLDALP 662
           + L+L   IS LE G+                              G LL+TM+   A+P
Sbjct: 661 THLRLPIAISELEKGL------------------------------GSLLETMSLTGAVP 720

[Close]
BLAST of HG10002132 vs. TAIR 10
Match: AT5G26760.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 232.6 bits (592), Expect = 8.9e-61
Identity = 158/424 (37.26%), Postives = 222/424 (52.36%), Query Frame = 0 

Query: 274 KNNVGRKAKGSKERTKVSATEESTKNLSDAPSTSNQCNTNCNLMTEE--PRGGSNDLSGT 333
           KN +   + GS  +   +  E+S K +      +N       ++  E   R  + D+  +
Sbjct: 45  KNTLSGSSSGSNTKGSKTKPEKSRKKIISVEYHANSYEDGEEILAAESYERHKAQDVCSS 104

Query: 334 G---IKSSLKQPGKKNLRRSVTWADEKTDDTSIINPPEVREMGKTKECSRITNNLVNSDN 393
                KS LK  G K L RSVTWAD+      +    EVR        S  +N++     
Sbjct: 105 SEIVTKSCLKISGSKKLSRSVTWADQNDGRGDLC---EVRNNDNAAGPSLSSNDI----E 164

Query: 394 DNEDLLRFESAEACAMALSQAAEAITSGKNEVSDAVSEAGIIILPR----PSDANEEAST 453
           D   L R   AEA A ALSQAAEA++SG ++ SDA ++AGII+LP       +  EE S 
Sbjct: 165 DVNSLSRLALAEALATALSQAAEAVSSGNSDASDATAKAGIILLPSTHQLDEEVTEEHSE 224

Query: 454 NPVNAFEPHSLSEKSNKLGELRSDLFDPNDSWYDAPPEGFSLTLSSFATMWMAIFAWITS 513
             +   EP +L +  NK G   SDLFD + SW+D PPEGF+LTLS+FA MW ++F W++S
Sbjct: 225 EEMTEEEP-TLLKWPNKPGIPDSDLFDRDQSWFDGPPEGFNLTLSNFAVMWDSLFGWVSS 284

Query: 514 SSLAYIYGKDDKFHEEFLYIDGKEYPRKIVSTDGRSSEIKQTLAGCLTRSIPGLASELKL 573
           SSLAYIYGK++  HEEFL ++GKEYPR+I+  DG SSEIKQT+AGCL R++P + + L+L
Sbjct: 285 SSLAYIYGKEESAHEEFLLVNGKEYPRRIIMVDGLSSEIKQTIAGCLARALPRVVTHLRL 344

Query: 574 STPISSLEHGMGRCWYLSKQGIVGLKSERGEGVGVEGGFLDGHLLDTMTFLDALPAFRMK 633
              IS LE G+                              G LL+TM+   A+P+FR+K
Sbjct: 345 PIAISELEKGL------------------------------GSLLETMSLTGAVPSFRVK 404

Query: 634 QW---------------------------QVLDRAQIRPDEFELMKDHILPLGRTAQFSV 662
           +W                           ++L+ + I  +E+E MKD +LPLGR  QF+ 
Sbjct: 405 EWLVIVLLFLDALSVSRIPRIAPYISNRDKILEGSGIGNEEYETMKDILLPLGRVPQFAT 430

The following BLAST results are available for this feature:
BLAST of HG10002132 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038893419.10.0e+0084.10putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Benincasa h... [more]
XP_031739958.11.4e-30580.49putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [Cucumis sat... [more]
XP_008454119.17.0e-30280.20PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog [... [more]
KAA0044516.17.8e-30179.77putative RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein [Cucumi... [more]
XP_022955995.12.5e-29979.34putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X1 [... [more]
BLAST of HG10002132 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4K1B14.4e-10536.50Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Arabidops... [more]
A2Y0408.9e-8232.77Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Oryza sat... [more]
Q6AVZ92.6e-8132.63Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Oryza sat... [more]
Q8IXW52.6e-0923.56Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 OS=Homo sapiens OX=9... [more]
Q5RA373.4e-0923.56Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 OS=Pongo abelii OX=9... [more]
BLAST of HG10002132 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVU36.6e-30680.49RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucumis sativus OX... [more]
A0A1S3BXZ93.4e-30280.20RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucumis melo OX=36... [more]
A0A5A7TQX73.8e-30179.77RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucumis melo var. ... [more]
A0A6J1GWL91.2e-29979.34RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucurbita moschata... [more]
A0A6J1IY578.7e-29878.76RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog OS=Cucurbita maxima O... [more]
BLAST of HG10002132 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G26760.23.1e-10636.50unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF408 ... [more]
AT5G26760.18.9e-6137.26unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007308Rtr1/RPAP2 domainPFAMPF04181RPAP2_Rtr1coord: 36..108
e-value: 2.8E-22
score: 78.8
IPR007308Rtr1/RPAP2 domainPROSITEPS51479ZF_RTR1coord: 32..117
score: 20.285557
IPR038534Rtr1/RPAP2 domain superfamilyGENE3D1.25.40.820coord: 2..145
e-value: 1.3E-30
score: 108.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..338
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..347
IPR039693Rtr1/RPAP2PANTHERPTHR14732UNCHARACTERIZEDcoord: 6..656

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10002132.1HG10002132.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain
cellular_component GO:0005634 nucleus
molecular_function GO:0046872 metal ion binding
molecular_function GO:0043175 RNA polymerase core enzyme binding
molecular_function GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity