HG10002031 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10002031
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	F-box protein SKIP23-like
Location	Chr11: 2731511 .. 2732260 (+)
RNA-Seq Expression	HG10002031
Synteny	HG10002031

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCAAATAATCGTTCATGTTCTTCATTTGAATAAAATTGTGCTTTCACCTTGTCCACCGCATTCCAATGATTTTATTGCGATTGCCATACATGGTAAATTATCAAGACTATCTTTTACCAAACTTGGTAAAAATGGGTGGACGGAAATTCCTACATCACGTTCATCAGATTTTCATGATTGTGTAATCTCTAATGGGAAAATTTATGCCATTAATTCTCGTGCAGAACTTTGGGTCTCCAATATTGAGACCCCAAAAGAGATGGTGAATTTGGGTTTAAAACGACTTAAGTTGAAAAAATGGTCAAAATTGTATTTGGTTAAAACCGATAATGATGAGTTGTTGATGATTGAGAGACGGTTAAATATTGAACTTCTCTTGAATCATTGGGATTACCTTGACCGTGACTACGAGACTATTGGGTTCAATTTATTCAAGCTAGATTCAAGCAATGAAAGGTTAAGATGGATCAAAGTTAATAATTTGGATAATTCATGTGCCATCTTTTTGGGGTTGAATACTTCTATCTACCATCGTGGATTATTAAATGGTAATTGTATTTACTACTCGGATGACCAAACAAAGCGGCATGTTTATGATTATCTCGGTGGTCATGATTTTGGAGTCTTCGATATAGCAAATAACAGTTGTCGTCGCTTGTTGGATGATCATCGTCTTATTCGTAATTTTGTTTGGCCTCCTCCAGTATGGGTGGCGCTTAAGGATTCAAATATAGATGTTAGTTAA

mRNA sequence

ATGAGTCAAATAATCGTTCATGTTCTTCATTTGAATAAAATTGTGCTTTCACCTTGTCCACCGCATTCCAATGATTTTATTGCGATTGCCATACATGGTAAATTATCAAGACTATCTTTTACCAAACTTGGTAAAAATGGGTGGACGGAAATTCCTACATCACGTTCATCAGATTTTCATGATTGTGTAATCTCTAATGGGAAAATTTATGCCATTAATTCTCGTGCAGAACTTTGGGTCTCCAATATTGAGACCCCAAAAGAGATGGTGAATTTGGGTTTAAAACGACTTAAGTTGAAAAAATGGTCAAAATTGTATTTGGTTAAAACCGATAATGATGAGTTGTTGATGATTGAGAGACGGTTAAATATTGAACTTCTCTTGAATCATTGGGATTACCTTGACCGTGACTACGAGACTATTGGGTTCAATTTATTCAAGCTAGATTCAAGCAATGAAAGGTTAAGATGGATCAAAGTTAATAATTTGGATAATTCATGTGCCATCTTTTTGGGGTTGAATACTTCTATCTACCATCGTGGATTATTAAATGGTAATTGTATTTACTACTCGGATGACCAAACAAAGCGGCATGTTTATGATTATCTCGGTGGTCATGATTTTGGAGTCTTCGATATAGCAAATAACAGTTGTCGTCGCTTGTTGGATGATCATCGTCTTATTCGTAATTTTGTTTGGCCTCCTCCAGTATGGGTGGCGCTTAAGGATTCAAATATAGATGTTAGTTAA

Coding sequence (CDS)

ATGAGTCAAATAATCGTTCATGTTCTTCATTTGAATAAAATTGTGCTTTCACCTTGTCCACCGCATTCCAATGATTTTATTGCGATTGCCATACATGGTAAATTATCAAGACTATCTTTTACCAAACTTGGTAAAAATGGGTGGACGGAAATTCCTACATCACGTTCATCAGATTTTCATGATTGTGTAATCTCTAATGGGAAAATTTATGCCATTAATTCTCGTGCAGAACTTTGGGTCTCCAATATTGAGACCCCAAAAGAGATGGTGAATTTGGGTTTAAAACGACTTAAGTTGAAAAAATGGTCAAAATTGTATTTGGTTAAAACCGATAATGATGAGTTGTTGATGATTGAGAGACGGTTAAATATTGAACTTCTCTTGAATCATTGGGATTACCTTGACCGTGACTACGAGACTATTGGGTTCAATTTATTCAAGCTAGATTCAAGCAATGAAAGGTTAAGATGGATCAAAGTTAATAATTTGGATAATTCATGTGCCATCTTTTTGGGGTTGAATACTTCTATCTACCATCGTGGATTATTAAATGGTAATTGTATTTACTACTCGGATGACCAAACAAAGCGGCATGTTTATGATTATCTCGGTGGTCATGATTTTGGAGTCTTCGATATAGCAAATAACAGTTGTCGTCGCTTGTTGGATGATCATCGTCTTATTCGTAATTTTGTTTGGCCTCCTCCAGTATGGGTGGCGCTTAAGGATTCAAATATAGATGTTAGTTAA

Protein sequence

MSQIIVHVLHLNKIVLSPCPPHSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELWVSNIETPKEMVNLGLKRLKLKKWSKLYLVKTDNDELLMIERRLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRGLLNGNCIYYSDDQTKRHVYDYLGGHDFGVFDIANNSCRRLLDDHRLIRNFVWPPPVWVALKDSNIDVS

Homology

[Close]

BLAST of HG10002031 vs. NCBI nr
Match: XP_038888322.1 (putative F-box protein At2g16290 [Benincasa hispida])

HSP 1 Score: 349.4 bits (895), Expect = 2.6e-92
Identity = 162/201 (80.60%), Postives = 182/201 (90.55%), Query Frame = 0


Query: 43  LGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELWVSNIETPKEMVNLGLKRLKLKKW 102
           LGKNGW EIPTS +SDFHDC+I +GKIYAINSRAELWVSNIETPKEMVNLGLKRL+LKK 
Sbjct: 2   LGKNGWMEIPTSNTSDFHDCIIFDGKIYAINSRAELWVSNIETPKEMVNLGLKRLRLKKQ 61

Query: 103 SKLYLVKTDNDELLMIERRLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNN 162
           SKLYLVK DND+LLMIERR NIE L+ +W+Y +RDYET+GFNLFK+DSS E+LRWIKVNN
Sbjct: 62  SKLYLVKMDNDDLLMIERRFNIEFLVKYWNYFERDYETVGFNLFKMDSSKEKLRWIKVNN 121

Query: 163 LDNSCAIFLGLNTSIYHRGLLNGNCIYYSDDQTKRHVYDYLGGHDFGVFDIANNSCRRLL 222
           LD+ C +FLGLNTSI +RG LNGN IYYSDDQTKRHVYD++GGHDFGV+DIAN SCRRLL
Sbjct: 122 LDDYC-VFLGLNTSICYRGSLNGNHIYYSDDQTKRHVYDFVGGHDFGVYDIANESCRRLL 181

Query: 223 DDHRLIRNFVWPPPVWVALKD 244
           DD R+I NFVWPPPVWV LK+
Sbjct: 182 DDQRVITNFVWPPPVWVTLKN 201

[Close]

BLAST of HG10002031 vs. NCBI nr
Match: XP_022155372.1 (F-box protein SKIP23-like [Momordica charantia])

HSP 1 Score: 179.1 bits (453), Expect = 4.7e-41
Identity = 117/248 (47.18%), Postives = 149/248 (60.08%), Query Frame = 0


Query: 2   SQIIVHVLHLNKIVLSPCPPHSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHD 61
           S+  VH  ++ KIVLS   P SNDF+A+AI+    +L+FTK G + WT I TS  ++FHD
Sbjct: 152 SRARVHGEYIRKIVLSSLAP-SNDFMAVAIYDSSDKLAFTKFGDDKWTAISTS-LNNFHD 211

Query: 62  CVISNGKIYAINSRAELWVSNIE-TPKEMVNLGLKRLKLKKWSKLYLVKTDNDELLMIER 121
           C+  +GKIYA+N   +L V +I+ TP ++VNL LKR KL+  SKLYLV+T N ++LM+ER
Sbjct: 212 CIYFDGKIYAVNVLGDLGVCSIDGTPTQLVNLPLKRPKLEVTSKLYLVET-NGDMLMVER 271

Query: 122 RLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHR 181
                 L N        Y+TIGFNLFK DS      W+K+ NLD  C IFLGLNTSI   
Sbjct: 272 LSKYMALFNRGRRC-YGYKTIGFNLFKFDSEG----WLKIENLD-GCTIFLGLNTSICIS 331

Query: 182 G----LLNGNCIYYSDDQTKRHVYDYLGGH---DFGVFDIANNSCRRLLDDHRLIRNFVW 241
                 L GN IYY+ D  K      +G H   DFGVFD+ + S R L  D      FVW
Sbjct: 332 SKSCPKLRGNHIYYTFDHEKEPA-QVIGSHACYDFGVFDMTDRSRRCLWHDDP-SDPFVW 388

[Close]

BLAST of HG10002031 vs. NCBI nr
Match: XP_022155366.1 (F-box protein SKIP23-like [Momordica charantia])

HSP 1 Score: 152.5 bits (384), Expect = 4.7e-33
Identity = 104/248 (41.94%), Postives = 136/248 (54.84%), Query Frame = 0


Query: 2   SQIIVHVLHLNKIVLSPCPPHSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHD 61
           S+  VH  ++ KIVLS   P SNDF+A+AI+    +L+FTK G + WT I TS  ++FHD
Sbjct: 152 SRARVHGEYIRKIVLSSLAP-SNDFMAVAIYDSSDKLAFTKFGDDKWTAISTS-LNNFHD 211

Query: 62  CVISNGKIYAINSRAELWVSNI-ETPKEMVNLGLKRLKLKKWSKLYLVKTDNDELLMIER 121
           C+  +GKIYA+N   +L V +I +TP ++VNL LKR KL+  SKLY+V+T N +LLM+ER
Sbjct: 212 CIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYMVET-NGDLLMVER 271

Query: 122 RLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHR 181
                 L N        Y+TIGFNLFKLDS      W+K+ NLD  C IFLGLNTS+   
Sbjct: 272 LSKYMALFNRGRRC-YGYKTIGFNLFKLDSDG----WLKIENLD-GCTIFLGLNTSM--- 331

Query: 182 GLLNGNCIYYSDDQTKRHVYDYLGGHDFGVFDIANNSCRRLLDDHRLI-------RNFVW 241
                 C                         I++ SC +L D  R           FVW
Sbjct: 332 ------C-------------------------ISSKSCPKLRDRSRRCLWHDDPSDPFVW 356

[Close]

BLAST of HG10002031 vs. NCBI nr
Match: XP_019420605.1 (PREDICTED: F-box protein SKIP23-like [Lupinus angustifolius] >OIV94867.1 hypothetical protein TanjilG_22064 [Lupinus angustifolius])

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-24
Identity = 75/251 (29.88%), Postives = 134/251 (53.39%), Query Frame = 0


Query: 6   VHVLHLNKIVLSPCPP-HSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVI 65
           +  +HL+KI++S  P  H++DF+A+AI+G+  +L+  ++G + WT   T +S    D + 
Sbjct: 157 IQKMHLHKIIMSSSPKNHNHDFMALAIYGEQRQLALCRIGDSKWTTFSTKQSYFLQDVIF 216

Query: 66  SNGKIYAINSRAELW----------VSNIETPKEMVNLGLKRLKLKKWSKLYLVKTDNDE 125
             GKIY I+  A+L+          +  +  PK+       R++    +  YL++    +
Sbjct: 217 YEGKIYGIDIVAKLFEFDPKTLTGSIVQVPPPKD----DDPRIRFLDVTTKYLIRNVEGD 276

Query: 126 LLMIERRLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLN 185
           LL++ RR   +    +    ++ Y T  FN++KLD S +  +W +V+++ NS  + +G N
Sbjct: 277 LLLVVRRWEWKKWRENGGVDEKYYNTTKFNVYKLDKSVK--QWKRVSSVGNS-VLVVGFN 336

Query: 186 TSIYHRGLLNG------NCIYYSDDQTKRHVYDYLGGHDFGVFDIANNSCRRLLDDHRLI 240
           TSI      +G      NCIY+SD+  +       GGHD G+F++ NN+ ++   D    
Sbjct: 337 TSICMLPFSDGKNNWVRNCIYFSDNHVEAQYRQVYGGHDVGIFNLQNNTIQQFFPD---- 396

[Close]

BLAST of HG10002031 vs. NCBI nr
Match: XP_022156879.1 (putative F-box protein At4g17565 [Momordica charantia])

HSP 1 Score: 121.7 bits (304), Expect = 8.9e-24
Identity = 85/204 (41.67%), Postives = 117/204 (57.35%), Query Frame = 0


Query: 3   QIIVHVLHLNKIVLSPCPPHSND-FIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHD 62
           Q  V V +++KI    C  HS D FIA+AI+   S+++FTKLG + WT IPT   SD  D
Sbjct: 142 QTDVPVAYVHKI----CLLHSKDHFIAVAIYNVFSKIAFTKLGDDKWTAIPT---SDICD 201

Query: 63  CVISNGKIYAINSRAELWVSNIETPKEMVNLGLK------RLKLKKWSKLYLVKTDNDEL 122
           C++ + KIYA+    +L VS I+ P ++  + +K      R +L   S LYLV  D DEL
Sbjct: 202 CILFHEKIYALTKFQDLVVSPIDDPTQVAGIKVKNMNVIMRQRLSIESTLYLVGRD-DEL 261

Query: 123 LMIERRLNIE--LLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGL 182
           LM+ER   ++   L     Y  +   T+GFNL+KLD    R  W K+ NLD  C+IFLGL
Sbjct: 262 LMVERLFKVQHVQLRGKTSYASK---TVGFNLYKLDWVESRATWSKIYNLD-GCSIFLGL 321

Query: 183 NTSIYHRG----LLNGNCIYYSDD 194
           NTS+         L GN I+Y++D
Sbjct: 322 NTSLCISSKDCPKLRGNQIFYTND 333

[Close]

BLAST of HG10002031 vs. ExPASy TrEMBL
Match: A0A6J1DP54 (F-box protein SKIP23-like OS=Momordica charantia OX=3673 GN=LOC111022516 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.3e-41
Identity = 117/248 (47.18%), Postives = 149/248 (60.08%), Query Frame = 0


Query: 2   SQIIVHVLHLNKIVLSPCPPHSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHD 61
           S+  VH  ++ KIVLS   P SNDF+A+AI+    +L+FTK G + WT I TS  ++FHD
Sbjct: 152 SRARVHGEYIRKIVLSSLAP-SNDFMAVAIYDSSDKLAFTKFGDDKWTAISTS-LNNFHD 211

Query: 62  CVISNGKIYAINSRAELWVSNIE-TPKEMVNLGLKRLKLKKWSKLYLVKTDNDELLMIER 121
           C+  +GKIYA+N   +L V +I+ TP ++VNL LKR KL+  SKLYLV+T N ++LM+ER
Sbjct: 212 CIYFDGKIYAVNVLGDLGVCSIDGTPTQLVNLPLKRPKLEVTSKLYLVET-NGDMLMVER 271

Query: 122 RLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHR 181
                 L N        Y+TIGFNLFK DS      W+K+ NLD  C IFLGLNTSI   
Sbjct: 272 LSKYMALFNRGRRC-YGYKTIGFNLFKFDSEG----WLKIENLD-GCTIFLGLNTSICIS 331

Query: 182 G----LLNGNCIYYSDDQTKRHVYDYLGGH---DFGVFDIANNSCRRLLDDHRLIRNFVW 241
                 L GN IYY+ D  K      +G H   DFGVFD+ + S R L  D      FVW
Sbjct: 332 SKSCPKLRGNHIYYTFDHEKEPA-QVIGSHACYDFGVFDMTDRSRRCLWHDDP-SDPFVW 388

[Close]

BLAST of HG10002031 vs. ExPASy TrEMBL
Match: A0A6J1DRH7 (F-box protein SKIP23-like OS=Momordica charantia OX=3673 GN=LOC111022508 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.3e-33
Identity = 104/248 (41.94%), Postives = 136/248 (54.84%), Query Frame = 0


Query: 2   SQIIVHVLHLNKIVLSPCPPHSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHD 61
           S+  VH  ++ KIVLS   P SNDF+A+AI+    +L+FTK G + WT I TS  ++FHD
Sbjct: 152 SRARVHGEYIRKIVLSSLAP-SNDFMAVAIYDSSDKLAFTKFGDDKWTAISTS-LNNFHD 211

Query: 62  CVISNGKIYAINSRAELWVSNI-ETPKEMVNLGLKRLKLKKWSKLYLVKTDNDELLMIER 121
           C+  +GKIYA+N   +L V +I +TP ++VNL LKR KL+  SKLY+V+T N +LLM+ER
Sbjct: 212 CIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYMVET-NGDLLMVER 271

Query: 122 RLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHR 181
                 L N        Y+TIGFNLFKLDS      W+K+ NLD  C IFLGLNTS+   
Sbjct: 272 LSKYMALFNRGRRC-YGYKTIGFNLFKLDSDG----WLKIENLD-GCTIFLGLNTSM--- 331

Query: 182 GLLNGNCIYYSDDQTKRHVYDYLGGHDFGVFDIANNSCRRLLDDHRLI-------RNFVW 241
                 C                         I++ SC +L D  R           FVW
Sbjct: 332 ------C-------------------------ISSKSCPKLRDRSRRCLWHDDPSDPFVW 356

[Close]

BLAST of HG10002031 vs. ExPASy TrEMBL
Match: A0A4P1QTT0 (DUF295 domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_22064 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 6.7e-25
Identity = 75/251 (29.88%), Postives = 134/251 (53.39%), Query Frame = 0


Query: 6   VHVLHLNKIVLSPCPP-HSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVI 65
           +  +HL+KI++S  P  H++DF+A+AI+G+  +L+  ++G + WT   T +S    D + 
Sbjct: 157 IQKMHLHKIIMSSSPKNHNHDFMALAIYGEQRQLALCRIGDSKWTTFSTKQSYFLQDVIF 216

Query: 66  SNGKIYAINSRAELW----------VSNIETPKEMVNLGLKRLKLKKWSKLYLVKTDNDE 125
             GKIY I+  A+L+          +  +  PK+       R++    +  YL++    +
Sbjct: 217 YEGKIYGIDIVAKLFEFDPKTLTGSIVQVPPPKD----DDPRIRFLDVTTKYLIRNVEGD 276

Query: 126 LLMIERRLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLN 185
           LL++ RR   +    +    ++ Y T  FN++KLD S +  +W +V+++ NS  + +G N
Sbjct: 277 LLLVVRRWEWKKWRENGGVDEKYYNTTKFNVYKLDKSVK--QWKRVSSVGNS-VLVVGFN 336

Query: 186 TSIYHRGLLNG------NCIYYSDDQTKRHVYDYLGGHDFGVFDIANNSCRRLLDDHRLI 240
           TSI      +G      NCIY+SD+  +       GGHD G+F++ NN+ ++   D    
Sbjct: 337 TSICMLPFSDGKNNWVRNCIYFSDNHVEAQYRQVYGGHDVGIFNLQNNTIQQFFPD---- 396

[Close]

BLAST of HG10002031 vs. ExPASy TrEMBL
Match: A0A6J1DUW8 (putative F-box protein At4g17565 OS=Momordica charantia OX=3673 GN=LOC111023713 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 4.3e-24
Identity = 85/204 (41.67%), Postives = 117/204 (57.35%), Query Frame = 0


Query: 3   QIIVHVLHLNKIVLSPCPPHSND-FIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHD 62
           Q  V V +++KI    C  HS D FIA+AI+   S+++FTKLG + WT IPT   SD  D
Sbjct: 142 QTDVPVAYVHKI----CLLHSKDHFIAVAIYNVFSKIAFTKLGDDKWTAIPT---SDICD 201

Query: 63  CVISNGKIYAINSRAELWVSNIETPKEMVNLGLK------RLKLKKWSKLYLVKTDNDEL 122
           C++ + KIYA+    +L VS I+ P ++  + +K      R +L   S LYLV  D DEL
Sbjct: 202 CILFHEKIYALTKFQDLVVSPIDDPTQVAGIKVKNMNVIMRQRLSIESTLYLVGRD-DEL 261

Query: 123 LMIERRLNIE--LLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGL 182
           LM+ER   ++   L     Y  +   T+GFNL+KLD    R  W K+ NLD  C+IFLGL
Sbjct: 262 LMVERLFKVQHVQLRGKTSYASK---TVGFNLYKLDWVESRATWSKIYNLD-GCSIFLGL 321

Query: 183 NTSIYHRG----LLNGNCIYYSDD 194
           NTS+         L GN I+Y++D
Sbjct: 322 NTSLCISSKDCPKLRGNQIFYTND 333

[Close]

BLAST of HG10002031 vs. ExPASy TrEMBL
Match: A0A6P4A3F5 (F-box protein SKIP23-like OS=Ziziphus jujuba OX=326968 GN=LOC107422701 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-20
Identity = 78/250 (31.20%), Postives = 124/250 (49.60%), Query Frame = 0


Query: 11  LNKIVLSPCPPHSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIY 70
           + K+VLS  P  +N FIA+AI  +   L+F K G   WT I  + S    D V  +G  Y
Sbjct: 164 VKKVVLSCSPLEANGFIALAILNQTGDLAFCKNGDQSWTIIDDALSYS-EDVVYVDGLFY 223

Query: 71  AINSRAEL----------WVSNIETPKEMVNLGLKRLKLKKWSKLYLVKTDNDELLMIER 130
           A+N    +           VS IETP++M             + +  +    D+L +I R
Sbjct: 224 AVNKYGGVAVCDVGGQSPGVSIIETPRQM------------GADMQYLVNSGDDLFLIPR 283

Query: 131 RLNIELLLNHWDYLDRD----YETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTS 190
            L+++     +D +D +    Y T+GF++ K+D      RW KV++L     +F+GLN+S
Sbjct: 284 YLDVD-----YDSMDDEANVFYRTVGFDVLKMDWRGP--RWEKVSSLGGR-TLFIGLNSS 343

Query: 191 IYHRGLLN-------GNCIYYSDDQTKRHVYDYLGGHDFGVFDIANNSCRRLLDDHRLIR 240
           +    LL        GNCIY++DD ++ +     GGHD G+F + + + +R  + H  + 
Sbjct: 344 L---SLLASDFPGCVGNCIYFTDDYSEFNFETVFGGHDSGIFSLWDKTIQRQWNSHCRVH 386

The following BLAST results are available for this feature:

BLAST of HG10002031 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888322.1	2.6e-92	80.60	putative F-box protein At2g16290 [Benincasa hispida]	[more]
XP_022155372.1	4.7e-41	47.18	F-box protein SKIP23-like [Momordica charantia]	[more]
XP_022155366.1	4.7e-33	41.94	F-box protein SKIP23-like [Momordica charantia]	[more]
XP_019420605.1	1.4e-24	29.88	PREDICTED: F-box protein SKIP23-like [Lupinus angustifolius] >OIV94867.1 hypothe...	[more]
XP_022156879.1	8.9e-24	41.67	putative F-box protein At4g17565 [Momordica charantia]	[more]

BLAST of HG10002031 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10002031 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DP54	2.3e-41	47.18	F-box protein SKIP23-like OS=Momordica charantia OX=3673 GN=LOC111022516 PE=4 SV...	[more]
A0A6J1DRH7	2.3e-33	41.94	F-box protein SKIP23-like OS=Momordica charantia OX=3673 GN=LOC111022508 PE=4 SV...	[more]
A0A4P1QTT0	6.7e-25	29.88	DUF295 domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_220...	[more]
A0A6J1DUW8	4.3e-24	41.67	putative F-box protein At4g17565 OS=Momordica charantia OX=3673 GN=LOC111023713 ...	[more]
A0A6P4A3F5	1.3e-20	31.20	F-box protein SKIP23-like OS=Ziziphus jujuba OX=326968 GN=LOC107422701 PE=4 SV=1	[more]

BLAST of HG10002031 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005174	Domain unknown function DUF295	PFAM	PF03478	DUF295	coord: 159..212 e-value: 2.0E-5 score: 24.1
None	No IPR available	PANTHER	PTHR44259:SF67	F-BOX PROTEIN SKIP23-LIKE	coord: 10..240
None	No IPR available	PANTHER	PTHR44259	OS07G0183000 PROTEIN-RELATED	coord: 10..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10002031.1	HG10002031.1	mRNA