HG10001932 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCCACTTCCCATTCTCTCATCTCCTTCACCAATACTCAATGCCCCAACAAACCCAGATGCCTCCTTCCTCCCACAAATTCTAAATCCCTCTTTAGATCTCCTTCTCTCTCTTTCCGCTCCAAGTCGCTTCCCACTTTCCGCTGTTCTCTCAATAATGACGACCATCCCATTGAAAACAAAGCAAATGCTGTTCCCATTGAAAAGAGTAAGCTCCCCTCTCTCTAATTTGAAATGGGGTTTTGTTGTTTTTTCTTTTTGTAGCTGATTTCATTTTCTCTTCAGACTTTCCATCTTTTCCTACTGTCATGGATATCAATGAGATTCGTAAAATCTTGCCCCACAGGTATTTGTTAAAATTCCTTGTGTGTTTTTGAGTTATGGGGTTTTGAAGATTTTTGTATTTTCTTCTTATGCATTGGGATTTCTTTTGCTGTAGGTTCCCGATTCTTTTAGTTGATAGAGTGATTGAATACAATCCTGGGGTCTCGGTTGTTGCTATAAAGAATGTCACCATAAATGAGTCTTTCTTTCCAGGGCACTTCCCCGAGAGACCCATCATGCCTGGTGTTCTCATGGTTGAGGTAAATTCTAAAGCTTGAAGTTGATTTTTGAGGATTAAGATGATATTGCATAACTGTTTAGTATCTGGTGAAATGAACTCTCTATGAATTGATGAATTAGGATTACTACCACCAAAACATTTTATATTTTTGAGTTTGGATAGAAATGGAATATTTGGGCGTTGTTTCTCCATTCTTCACTTTCAGTAGGTTTTCGATAGCTCGTATAGGGCCAACTGTTTGTAGTTTGATTGGGCATTTTAGAAGTTTTTCCTCGGTTGTTTTGTCAATTTGCGGTGTTTGTTTACATTGAGGGTTTTGCTTTTGAAGAATTTTTCGAGCCTTTCAAGATTAGTTTTTTTTTTTAGTTTTTAGTTTGAGATTGATTAGAGTATTGTCTTCTATTATTGGTTGTATTTGGCCGTAATGGTGGTAATTGCTATATTTTGTTTTATTATATTTTGAGTTTTAGTCTCTTTTCATTTTATCAATGAAAAGTCTTATTTTTTTTAAAAGAAAAGAATCGATAAGCTCGTTGGCAATATAGAAGGATTGGGGGTTTGTCTTCCCTCAACAAAAGCCACTTGGTAAGCAGAGATAGTATGAGGAAGAACCTTCTTTTATCTCTCAGCAAGAACCCTAGCCACAATCTTATAAAGGAAAGAGGTGAGGCTAATGGGTCTATAGTCATTAACTGTATGAGGGTCCAATTTCTTTGGAATGAGGCATACTTAGGTTTCATTGAGTGAGGCATTGATAATCTCATTCTTAAAAAGATCTTGGAACACTCGCATTATGCCACTTTTAAAAATATACCAAACTTTTTAAAAGATTTTAGCAGAGAAACTGATAGAACCAATGAGGGAGAAATTAGTAATACTAGGGAGGTAATAGAGAACTAAGGGAATCCAAAATATTGCTTATCTTCTCCATTCCCCTACCCCTCTATTTATAACCAACTTCCCTTACAAACTACTTAACTAATTACTAATATACCCTTAATATCCCTCTAATACCATTCCTATCAGAAACCATCAGACCGAGATTTGTTAGTGCCTAATTCAAAAACAGGCAAGTAAATTCTTCCTCATTGAACTCGCCTTCAAGCTATGAAGCTGATGATTTGAAATAGGGACCAATGAGTAATACTAGGGAGGGCCCGACTACTAGGTTTCTTTGTGTATAGAGGTGGAAGAGAAGGATGTTTTAACCAAATATTCTCAAAACGCAAGGGAGTAGGATAGGGTATGGGCCCAAAATACCTAATGATCTGGTAACATCGAGCTTTGGGGGTTGTGTCCTCTTATCAGAGGAGGTCAATGGTAGATTGGGTCCATGAACTTTGGCCAAGTAAACCAAGATGGTTATCAGCTATAAAAAATGGCTTCAACTTGATGAATAATCGACTTTGATGATGAAGGCAAATGCTCCTTAGTTGGAATAAATCCACTCAAATTCTCTATTTTTTCATTGCTTTCACTAAATCCATTCTAGATAGGGTCTTGCTCGAAGTTTCAAGAAATCCACCACACGCACCACTATGAAATTACCCAACTTATTCAAAGAATACTGTAAGGGAACTAATAGGGGTTTATGGCTAGGAGTAATATGGTATTAGTAAGGGCATAAGGGTAATCAGATAGGAAGTTAGTGTATTTTGTTTTAAATAGAGGGAGTGGGATTGAGGGAAGGGAGACATTTGTTGAGTGATGTAGGGCTTGGGTTAGCATACTCAAGAAGGGAGGCTCCAAGTGCCTTATACTTGGTTTATCTTGTAGTTCTTCATTCTGTATATTTCAATATATTTCAGATCTTGATTCCTGTTAGGTCCCTAACAAATACCTGCACGAGTTTGCCTTGTCTCAAGCTCTAGACAAGCTTAGAATTTTTTTGAGTGTTGAACATGAACCTAATTCTCTTCTAAATTCTATGTAGCCTACTGATGGTAATAGATTGTTGCAACAGTGACTTTTTTGGAGTTAGAATTTCTCAAACGTGGTTTGACCATGCAAGGATTTTTTGCTAGTTTTAATGTCTATCGAGATGAGGAAGCTTCCACACAAAGTTGAAAGCCATGGAAGAAATTTTCTCTCAGTTTAGTTGATGATCATATGATCTAAGAGCGTGGACGATATATTCCTTTTGCATTTGTTGACTACTTTAATGAACAGGATGAAATCCTATTTAGCTTGAGAATATTTTTACTCATATGGGAAATATTTCATCTACTGTTGCTTTTAATGAATATTCTGTGCACTGTGAAACTTTGCCAAAAATGATGATTTGGGGGGTTCGGTTGATTACGAATGGAGTTTTATGGTAGGTTGCCACTAGACTTCTTTAGTAAATTAGCCAATCTGTACTGGATTTGCATCTTATTAATACATGGTTGGGAATCTTACTGTTAATACTTCGATGAGGCATTTAGAGAATTGGGTAGATCAATTCATTTTGGTTATTTCAAATTTTGTAGCCCCACCGTTGATGAGCATGCCCAACATCACGTAAATGTTTTAGAGGTGGCTGTATTGTGCGTCACCAGCTTATAGCTAAGTTGCTAACTGAATCTAACTGAATCTAACTGAATAAAATGTTCTTTTGCTCTTTACCAATTTGCGTAGTTTAGGACATATATATGAGTTGACAGGGTATCTGCAGACCTTCCCAAAATTAAGGAAATGGTAAAGTGATCTTCCTAAGTACTTCAAGGACGTATAATTTTTGGGTCTTATAGGCTTCCTGCAAGTTTATTGCCAAAGATGGAATTGCTGCTCTGTCCCCTGACTAAACAAACTAAAAAAGATAGTTTTCACCAAAAGAAAGAAGTGGAAGCCGTAACTTAGAATTTGAAGGTTGCTAATGAGCCTGCAACCACATTTGTAGTTCTTGCCCCAGCCCTCATTATTCATATTAATGCTTTTCAAGGTACTAGACTAGGGGCTGTGTTGATGCAAGGACTGACGTTGACATATTATAACCACATTGTTACCTTAAGATGAGACATCACTTTAGGCTATTGTGTTAGTTCAGGAATGGAGACCTTATATGCTTGACCGCAAGTTTATCATCTGGACAAATTAGTAAGTCCTTAGTACGCAGGGACTATTACCGTTGGATTACAAAACTGATGGGTTATGATTTTGACATTCAAGGCAGTTTCGGTTTAATAAACAAAGTTGCTGATGCTTTGTATTGTTGTTATTTTTATTATTATAAAAGACCAGCCCTCATTATTCATATTAATGCTTTTCAAGGTACTAGACTAGGGGCTGTGTTGATGCAAGGACTGACGTTGACATATTATAACCACATTCTTACCTTAAGATGAGACATCACTTTAGGCTATTGGGTTAGTTCAGGAATGGAGACCTTATATGCTTGACCGCAAGTTTATCATCTGGACAAATTAGTAAGTCCTTAGTACGCAGGGACTATTACCGTTGGATTACAAAACTGATGGGTTATGATTTTGACATTCAAGGCAGTTTCGGTTTAATAAACAAAGTTGCTGATGCTTTGTATTGTTACTTTTATTATTATAAAAGACCAACTTTCATTGAGAAGAAAAATGAAAGAATACAATGGCACAAAAAAAAAAAAAAAAAAAAAACAGAACAAAGCCCACAAATGGAAACACCCTAAAGAAAGGGCTCCAATCAAGCAAAATAAGTCCTAGTGAATAATAAGAAAAGAAACTTATCAACGACGTCCAAAGAGAGACATTAAATCCCCCAAGGGTCAAAACAACTGCTGATGCTTTGTCTAGACACCTCGTTGAACCAAAATTTGAGTTCACTGTTCTTAAATTGCCGATTGACCAAAAAACTTAAGCTTATGGGTGAAGGCAAATTTAATATTAATATCATCTAACACTCCCCCCACTTGTGGACTTGAAATATGAAGAAGACCCAACAAGTGGGAAATCAATATTGATTGGAGAGGAAATAACATTGAAGGGGTTCGAACACAGGACCTCCTGAACCAACCTGCTCTAATACCATGTTAAATCGTCGATTGACCCAAAAGTTTAAGCTTATGGGTGAAGTAAAATTCAATATTATATCATCTAACAACTGTTAATCTCAGGTGAGGAGAATGTACAGATTATTAAGATTCCTATTGATGAAGATGAGGAGCTTAAACAAATGAAGCAATTGTTTTTAAACAGGAATAACATATTTCTTGGCTTTCATTGCGCCAAAATCTTCTCTAGTATAACGGTTGGTTAGTCCTTTCTCATGAATCACATGCCCTTTTACCTCTCAATAATTTTCACAAGATCTTTTAAAACTGGAATTTTTCTCGCACAATCCGGTATAAACTTGTCAGGACATATCCTTCTATCCCGAAGATCCCCAAATTTGATCTCCTTGTTTCTATGGTGTACTTAATTTGCATGTTATAAAACTCTATCATTGCTCGGTTTGTAGGCAATGGCTCAAACTGGCGGTTTAGTTATGCTGCAACCAGAGGTGGGAGGCTCTCGCGAAAATTTCTTCTTCGTTGGTATCGATAAAGTGAGATTCCGAAAACCCGTGATCGCAGGAGACACGTTGGTCATGCGAATGACTCTTGTCAAGTTGCAGAAGAAATTTGGAATTGCCAAAATGGAAGGGAAGGCATACGTTGGGGGGGAAGTTGTCTGCGAAGGTGAGTTCTTGATGGCCATGGGTAAAGAAGAGTGA ATGGCTGCCACTTCCCATTCTCTCATCTCCTTCACCAATACTCAATGCCCCAACAAACCCAGATGCCTCCTTCCTCCCACAAATTCTAAATCCCTCTTTAGATCTCCTTCTCTCTCTTTCCGCTCCAAGTCGCTTCCCACTTTCCGCTGTTCTCTCAATAATGACGACCATCCCATTGAAAACAAAGCAAATGCTGTTCCCATTGAAAAGAACTTTCCATCTTTTCCTACTGTCATGGATATCAATGAGATTCGTAAAATCTTGCCCCACAGGTTCCCGATTCTTTTAGTTGATAGAGTGATTGAATACAATCCTGGGGTCTCGGTTGTTGCTATAAAGAATGTCACCATAAATGAGTCTTTCTTTCCAGGGCACTTCCCCGAGAGACCCATCATGCCTGGTGTTCTCATGGTTGAGGCAATGGCTCAAACTGGCGGTTTAGTTATGCTGCAACCAGAGGTGGGAGGCTCTCGCGAAAATTTCTTCTTCGTTGGTATCGATAAAGTGAGATTCCGAAAACCCGTGATCGCAGGAGACACGTTGGTCATGCGAATGACTCTTGTCAAGTTGCAGAAGAAATTTGGAATTGCCAAAATGGAAGGGAAGGCATACGTTGGGGGGGAAGTTGTCTGCGAAGGTGAGTTCTTGATGGCCATGGGTAAAGAAGAGTGA ATGGCTGCCACTTCCCATTCTCTCATCTCCTTCACCAATACTCAATGCCCCAACAAACCCAGATGCCTCCTTCCTCCCACAAATTCTAAATCCCTCTTTAGATCTCCTTCTCTCTCTTTCCGCTCCAAGTCGCTTCCCACTTTCCGCTGTTCTCTCAATAATGACGACCATCCCATTGAAAACAAAGCAAATGCTGTTCCCATTGAAAAGAACTTTCCATCTTTTCCTACTGTCATGGATATCAATGAGATTCGTAAAATCTTGCCCCACAGGTTCCCGATTCTTTTAGTTGATAGAGTGATTGAATACAATCCTGGGGTCTCGGTTGTTGCTATAAAGAATGTCACCATAAATGAGTCTTTCTTTCCAGGGCACTTCCCCGAGAGACCCATCATGCCTGGTGTTCTCATGGTTGAGGCAATGGCTCAAACTGGCGGTTTAGTTATGCTGCAACCAGAGGTGGGAGGCTCTCGCGAAAATTTCTTCTTCGTTGGTATCGATAAAGTGAGATTCCGAAAACCCGTGATCGCAGGAGACACGTTGGTCATGCGAATGACTCTTGTCAAGTTGCAGAAGAAATTTGGAATTGCCAAAATGGAAGGGAAGGCATACGTTGGGGGGGAAGTTGTCTGCGAAGGTGAGTTCTTGATGGCCATGGGTAAAGAAGAGTGA MAATSHSLISFTNTQCPNKPRCLLPPTNSKSLFRSPSLSFRSKSLPTFRCSLNNDDHPIENKANAVPIEKNFPSFPTVMDINEIRKILPHRFPILLVDRVIEYNPGVSVVAIKNVTINESFFPGHFPERPIMPGVLMVEAMAQTGGLVMLQPEVGGSRENFFFVGIDKVRFRKPVIAGDTLVMRMTLVKLQKKFGIAKMEGKAYVGGEVVCEGEFLMAMGKEE Homology
BLAST of HG10001932 vs. NCBI nr
Match: XP_038906318.1 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ-like [Benincasa hispida]) HSP 1 Score: 409.8 bits (1052), Expect = 1.5e-110 Identity = 207/223 (92.83%), Postives = 210/223 (94.17%), Query Frame = 0
BLAST of HG10001932 vs. NCBI nr
Match: XP_008453782.1 (PREDICTED: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [Cucumis melo] >TYK16736.1 3-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Cucumis melo var. makuwa]) HSP 1 Score: 392.9 bits (1008), Expect = 1.9e-105 Identity = 202/224 (90.18%), Postives = 206/224 (91.96%), Query Frame = 0
BLAST of HG10001932 vs. NCBI nr
Match: KAA0044724.1 (3-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Cucumis melo var. makuwa]) HSP 1 Score: 391.0 bits (1003), Expect = 7.1e-105 Identity = 201/224 (89.73%), Postives = 205/224 (91.52%), Query Frame = 0
BLAST of HG10001932 vs. NCBI nr
Match: XP_004149140.1 (uncharacterized protein LOC101207195 [Cucumis sativus] >KGN53227.1 hypothetical protein Csa_015031 [Cucumis sativus]) HSP 1 Score: 383.6 bits (984), Expect = 1.1e-102 Identity = 197/223 (88.34%), Postives = 202/223 (90.58%), Query Frame = 0
BLAST of HG10001932 vs. NCBI nr
Match: XP_023513624.1 (uncharacterized protein LOC111778171 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 379.0 bits (972), Expect = 2.8e-101 Identity = 195/225 (86.67%), Postives = 201/225 (89.33%), Query Frame = 0
BLAST of HG10001932 vs. ExPASy Swiss-Prot
Match: Q8DI01 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=fabZ PE=3 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.3e-37 Identity = 76/143 (53.15%), Postives = 107/143 (74.83%), Query Frame = 0
BLAST of HG10001932 vs. ExPASy Swiss-Prot
Match: P73848 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=fabZ PE=3 SV=2) HSP 1 Score: 156.4 bits (394), Expect = 3.8e-37 Identity = 81/146 (55.48%), Postives = 105/146 (71.92%), Query Frame = 0
BLAST of HG10001932 vs. ExPASy Swiss-Prot
Match: B0JIT3 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=fabZ PE=3 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 5.0e-37 Identity = 76/148 (51.35%), Postives = 104/148 (70.27%), Query Frame = 0
BLAST of HG10001932 vs. ExPASy Swiss-Prot
Match: Q3MH14 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=fabZ PE=3 SV=2) HSP 1 Score: 156.0 bits (393), Expect = 5.0e-37 Identity = 80/149 (53.69%), Postives = 105/149 (70.47%), Query Frame = 0
BLAST of HG10001932 vs. ExPASy Swiss-Prot
Match: Q8YUR4 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=fabZ PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 8.5e-37 Identity = 80/149 (53.69%), Postives = 105/149 (70.47%), Query Frame = 0
BLAST of HG10001932 vs. ExPASy TrEMBL
Match: A0A5D3D200 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005750 PE=3 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 9.0e-106 Identity = 202/224 (90.18%), Postives = 206/224 (91.96%), Query Frame = 0
BLAST of HG10001932 vs. ExPASy TrEMBL
Match: A0A1S3BWK3 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Cucumis melo OX=3656 GN=LOC103494410 PE=3 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 9.0e-106 Identity = 202/224 (90.18%), Postives = 206/224 (91.96%), Query Frame = 0
BLAST of HG10001932 vs. ExPASy TrEMBL
Match: A0A5A7TNL8 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00080 PE=3 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 3.4e-105 Identity = 201/224 (89.73%), Postives = 205/224 (91.52%), Query Frame = 0
BLAST of HG10001932 vs. ExPASy TrEMBL
Match: A0A0A0KXT9 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Cucumis sativus OX=3659 GN=Csa_4G029990 PE=3 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 5.5e-103 Identity = 197/223 (88.34%), Postives = 202/223 (90.58%), Query Frame = 0
BLAST of HG10001932 vs. ExPASy TrEMBL
Match: A0A6J1J565 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Cucurbita maxima OX=3661 GN=LOC111481409 PE=3 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 2.3e-101 Identity = 195/225 (86.67%), Postives = 202/225 (89.78%), Query Frame = 0
BLAST of HG10001932 vs. TAIR 10
Match: AT5G10160.1 (Thioesterase superfamily protein ) HSP 1 Score: 286.6 bits (732), Expect = 1.7e-77 Identity = 156/225 (69.33%), Postives = 173/225 (76.89%), Query Frame = 0
BLAST of HG10001932 vs. TAIR 10
Match: AT2G22230.1 (Thioesterase superfamily protein ) HSP 1 Score: 281.2 bits (718), Expect = 7.3e-76 Identity = 151/219 (68.95%), Postives = 172/219 (78.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|