HG10001858 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001858
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	autophagy-related protein 3
Location	Chr11: 1138955 .. 1142110 (-)
RNA-Seq Expression	HG10001858
Synteny	HG10001858

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCATTGGTTGAAGAGGATCACAAGTTATTGCTGGCCCTCTCAATTCAAAGAAAGAATTATCGTCTTCACCGAATTCGATTTCCTTGCCGCCGGCAATTATCTCGTCGCAAAATGCGATACTTGGTCTTGGTATTCTTGCGTTTCTTATATGTTTTCCCTATAACTTCTTAGGAACACCATGATTCTCTTTATGCTATTTTAGTTTCTTTTTTCGAAGAATCTTTCTTAATACTGTGGTTCATTCGATTTTTAGGAAATCTGGGGATTTGAGCAAACAGAAGTCGTGTTTACCATATGACAAACAGTTTTTGATTTTAAGAGATGGTCAGTTGGGTTATCTTTTTTCTGTACTATCCATTTTGGTCATGCTGATTTTAAGTGATGTTTCTAGTTTAATTGTTTTGAATCGCACTTGACGTATTTAAAGATCAGAAGTTTTGTATTAGGGTTATACTTGTGATTAGCCATTTCAGTTGAGAACATCGGTAATTGTATTGGTGTATAGTGTATTCTTTAATTCTTCAAGAATCAACAGAAACCCACATTGTTGTTACTAAAATTAAAATACTATTATTATTGGTTGCTAGGTTGTTCTGTTTCATTCTAATTAGCAAGAACCTTTTCTTTTCTAAACTCATCTTAACTTAAATTCTTAGCAGAACAGTAAATTTTAAAGATGGTCTTTTCTGCATAAAAACAATATTAGATAGAAGGAACGCCTGTTTATGAGAGTGGCCACTAATGCTGTGCTTCTTTTTCAGTTCCTTGTCTGCGAAGGGCTTTCTCTGATGAAGAAGAATATGTGATTGTTGGTGGTGGTGGTGAAGATGATGATCGGCTCCTTATTCATGGGGATCCAAGTGGTCTGCCACATAAATTTAAACATATTTCACACCTTTGCTGATTTCTTCTAATTGTTCCATCTTAAATACATTTTAAAATTGTTCTATTTTTTTTCCTCACATAAACAGAGTCTATAGATGAGGATAACTTGCTTTCAACCGAAGAATCGCCAGAACTAGAAAGAAAGAATCCTATAATTACGATAATTGATTCATACTTTGGTGTTGATAGAAAAGAAGATGTACCATATATGGAAAAATCTATTAAATCCTATCCTGTAAGTTTGTAATTGCAATGCAATCATTGATATGCAAGGGATGCTTATTAAGTATCTGAGATTGTCATCTAAATATGTATACACAGGCAGCTCAGGAATCAACTCATCTTGTAGTCCATGATTCTGAAGATAGCATATGCCCAAGAACTTATGACATAACCATCACGTGAGATAATGTTTGAATGTCTTAGGTCCTTTATCGATAATTAATTGTGTACTTTATTGGACATTATACTTTTGTAGAAGAATCTATTTTATATGAGAACCTCTTGTCATATTCACAGTACTATTCAGAGGGTTCATCTGGAAAAGTTTTTTTATATGGTGTCTGTTGATCTGACCATCTCCTGTTGTTCCAGGTATGACAATGATCTTCAAACCTTCCGTTTTTGGCTCACTGGATATCACGAGGTTTGCACTTAAATCTTTCAGGGTCTAGCTGTGTATTACTGAAATTCAATGGTTGCGATAGTTTGGTGGCTTGTATTTGAGTCTATTTTGAACACTTAGGGTTCTAATCCTAAGAAGTTGCAGAATGTATATGTAAACACAATAAGGATAAATGCACAATATTCTCTTACCGTTGGCAGAAGCTATCCATCAAAAAAAGAGTTTGCAATAAGAATGGTCATTTACATGGTTGGAATGCCTTGAATCTGATATGTGGCGCTCCAAATGACCAAGTAAGAGGGCCTCGTTGCCCGATCAGCAAGTTGGGATCCAGGGGCGTCGCACCCTGGTGGAGTTGCCCCCAAAACCTAAGTTGAATTCGTATATGGTATATTTATATTATTTACGATTTTGACCCTAGAGTTTAAAGAAGTGCGCTATATAAATTCTTTAACTAGGTGTCTACTCTGTAATCTGAATTGTTCTCTTTAATAAAAATGTTCTCCCCTTGCTCCATAGACGTAGCTAACATACTGTTAGTGAACCACGTAAAGCTGTGTGTTGATTCTCTACTATTCATGTTTTTACTGTTTATCTTTGTTTGTCGATTACATAACATGATTACTATGCCATTTTCGTTCAATGTTAGATTTTATCACAGTTATCCTTCACTATCAATATCCCTTTTACACATTTTGTGCCATAATTTTAGTCTACTTTCCTCCATGATAAATATGAAAAAGCAATTCTGGAAAGAAAATTATTTTGTAGGTGATCAGCCTTTAAAACATTGAATTGCAAGTTAATTGCAAGCTACATATCTTCATGTTACCATACAATTATTACCCTAAGGTACACAACACCATATCCTTTTCATATTTTCAATCATTTCTTTTGTTAATGTATTTTGGCAGAATGGGATGCCCTTGCAACCAGAACTAATACTGGAAGATGTTAGGAAGAATCACGCAGGCAAAACGGTAAGATAAGATAAGAGCTGGCATCAGTTCTCTAGTTTAATAACCCGCACTTGAGGCTGATATTCTTCCATTGTTTGGATTAGACTCAAACCATGACCACTGGCAAAACGTTTTCTTTATAACATATGTTCATAACCCGAGGAGATAACAAAGAAAGAGTTTTTCAATACTGGACCCCAATTAACATAAGAGGGAGAAGTTGAGCAATCTTACCAAACAAAACCCAACCATCTAGCTAAATTCCACACGTCCTAGTGTTTTCTTTTTTCCACCCAAATCTTTCGTAAGACTTGCTTTGATAGCATCAAACTACAGGATCTTTTTTGTTGTCAGCTGTATGGACACTATCCAAGAACAGAGAAAAACCTCTTTGTTGGAATAAATATACTTTACTAAATATATAGGTTTTGTATATTTATTCTAACACTCTTCAATTGGCATTGCTCAAGAAGAGAGAACAAGAAAGCAACTCTAGATATCTAGTGTTTCCACAAAAGAATTCTATTGTAAATTGTAATCTAATCTCAATATGCAGGTAAATATCGAAGATCATCCTTACTTGCCTGGGAAACATGCATCTGTACATCCAAAAATTCATGGAGCTGCAGTGAAGAAAATGGTCGAAAATCGGAAGTCGCATGGGATTGAAGTCAAGAAGTAA

mRNA sequence

ATGATTCATTGGTTGAAGAGGATCACAAGTTATTGCTGGCCCTCTCAATTCAAAGAAAGAATTATCGTCTTCACCGAATTCGATTTCCTTGCCGCCGGCAATTATCTCGTCGCAAAATGCGATACTTGGTCTTGGAAATCTGGGGATTTGAGCAAACAGAAGTCGTGTTTACCATATGACAAACAGTTTTTGATTTTAAGAGATGTTCCTTGTCTGCGAAGGGCTTTCTCTGATGAAGAAGAATATGTGATTGTTGGTGGTGGTGGTGAAGATGATGATCGGCTCCTTATTCATGGGGATCCAAGTGAGTCTATAGATGAGGATAACTTGCTTTCAACCGAAGAATCGCCAGAACTAGAAAGAAAGAATCCTATAATTACGATAATTGATTCATACTTTGGTGTTGATAGAAAAGAAGATGTACCATATATGGAAAAATCTATTAAATCCTATCCTGCAGCTCAGGAATCAACTCATCTTGTAGTCCATGATTCTGAAGATAGCATATGCCCAAGAACTTATGACATAACCATCACGTATGACAATGATCTTCAAACCTTCCGTTTTTGGCTCACTGGATATCACGAGAATGGGATGCCCTTGCAACCAGAACTAATACTGGAAGATGTTAGGAAGAATCACGCAGGCAAAACGGTAAATATCGAAGATCATCCTTACTTGCCTGGGAAACATGCATCTGTACATCCAAAAATTCATGGAGCTGCAGTGAAGAAAATGGTCGAAAATCGGAAGTCGCATGGGATTGAAGTCAAGAAGTAA

Coding sequence (CDS)

ATGATTCATTGGTTGAAGAGGATCACAAGTTATTGCTGGCCCTCTCAATTCAAAGAAAGAATTATCGTCTTCACCGAATTCGATTTCCTTGCCGCCGGCAATTATCTCGTCGCAAAATGCGATACTTGGTCTTGGAAATCTGGGGATTTGAGCAAACAGAAGTCGTGTTTACCATATGACAAACAGTTTTTGATTTTAAGAGATGTTCCTTGTCTGCGAAGGGCTTTCTCTGATGAAGAAGAATATGTGATTGTTGGTGGTGGTGGTGAAGATGATGATCGGCTCCTTATTCATGGGGATCCAAGTGAGTCTATAGATGAGGATAACTTGCTTTCAACCGAAGAATCGCCAGAACTAGAAAGAAAGAATCCTATAATTACGATAATTGATTCATACTTTGGTGTTGATAGAAAAGAAGATGTACCATATATGGAAAAATCTATTAAATCCTATCCTGCAGCTCAGGAATCAACTCATCTTGTAGTCCATGATTCTGAAGATAGCATATGCCCAAGAACTTATGACATAACCATCACGTATGACAATGATCTTCAAACCTTCCGTTTTTGGCTCACTGGATATCACGAGAATGGGATGCCCTTGCAACCAGAACTAATACTGGAAGATGTTAGGAAGAATCACGCAGGCAAAACGGTAAATATCGAAGATCATCCTTACTTGCCTGGGAAACATGCATCTGTACATCCAAAAATTCATGGAGCTGCAGTGAAGAAAATGGTCGAAAATCGGAAGTCGCATGGGATTGAAGTCAAGAAGTAA

Protein sequence

MIHWLKRITSYCWPSQFKERIIVFTEFDFLAAGNYLVAKCDTWSWKSGDLSKQKSCLPYDKQFLILRDVPCLRRAFSDEEEYVIVGGGGEDDDRLLIHGDPSESIDEDNLLSTEESPELERKNPIITIIDSYFGVDRKEDVPYMEKSIKSYPAAQESTHLVVHDSEDSICPRTYDITITYDNDLQTFRFWLTGYHENGMPLQPELILEDVRKNHAGKTVNIEDHPYLPGKHASVHPKIHGAAVKKMVENRKSHGIEVKK

Homology

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BLAST of HG10001858 vs. NCBI nr
Match: XP_004146945.2 (autophagy-related protein 3 [Cucumis sativus] >KAE8649136.1 hypothetical protein Csa_014617 [Cucumis sativus])

HSP 1 Score: 352.1 bits (902), Expect = 4.2e-93
Identity = 183/256 (71.48%), Postives = 203/256 (79.30%), Query Frame = 0


Query: 1   MIHWLKRITSYCWPSQFKERIIVFTEFDFLAAGNYLVAKCDTWSWKSGDLSKQKSCLPYD 60
           M+HW      +  PSQ +E+ IVFTE DF+ AGN+LV   D+WSW+SGDLSKQKS LP D
Sbjct: 1   MVHW---FGIFRLPSQNREKTIVFTEADFITAGNFLVGNSDSWSWESGDLSKQKSNLPSD 60

Query: 61  KQFLILRDVPCLRRAFSDEEEYVIVGGGGEDDDRLLIHGDPSESIDEDNLLSTEESPELE 120
           KQFLILR+ PCLRRAFS +EEYVIVG  GED+ RLL     SES DEDNLLST+E P+  
Sbjct: 61  KQFLILRNAPCLRRAFSYKEEYVIVGSDGEDNARLL-----SESKDEDNLLSTKELPKPG 120

Query: 121 RKNPIITIIDSYFGVDRKED--VPYMEKSIKSYPAAQESTHLVVHDSEDSICPRTYDITI 180
              P ITII SYF VD+KED  +PYMEKSIK   A QESTH VVHDSED IC RTYDI+I
Sbjct: 121 TMKP-ITIIPSYFAVDKKEDLPLPYMEKSIKLCSATQESTHRVVHDSEDIICLRTYDISI 180

Query: 181 TYDNDLQTFRFWLTGYHENGMPLQPELILEDVRKNHAGKTVNIEDHPYLPGKHASVHPKI 240
           TYDND QTFRFWLTGYHE+G PLQPELI EDVR++H GKTVNIEDHPYLPGKHASVHPKI
Sbjct: 181 TYDNDHQTFRFWLTGYHEDGRPLQPELIFEDVRQSHVGKTVNIEDHPYLPGKHASVHPKI 240

Query: 241 HGAAVKKMVENRKSHG 255
           HGAAVKKMV+ R S G
Sbjct: 241 HGAAVKKMVKCRMSQG 247

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BLAST of HG10001858 vs. NCBI nr
Match: XP_008453898.1 (PREDICTED: autophagy-related protein 3 isoform X1 [Cucumis melo])

HSP 1 Score: 350.1 bits (897), Expect = 1.6e-92
Identity = 180/256 (70.31%), Postives = 202/256 (78.91%), Query Frame = 0


Query: 1   MIHWLKRITSYCWPSQFKERIIVFTEFDFLAAGNYLVAKCDTWSWKSGDLSKQKSCLPYD 60
           M+HW  +      PSQ +ER ++FTE DF+ AGN+LV   D+WSW+SGDLSKQKS LP D
Sbjct: 1   MVHWFGKFRR---PSQIRERTMLFTETDFITAGNFLVGNFDSWSWESGDLSKQKSYLPSD 60

Query: 61  KQFLILRDVPCLRRAFSDEEEYVIVGGGGEDDDRLLIHGDPSESIDEDNLLSTEESPELE 120
           KQFLILR+ PC RRAFS EE YVIVG  GED+DRLL     SES D DNLLST+E P+  
Sbjct: 61  KQFLILRNAPCPRRAFSYEEGYVIVGSDGEDNDRLL-----SESKDVDNLLSTKELPKPG 120

Query: 121 RKNPIITIIDSYFGVDRKED--VPYMEKSIKSYPAAQESTHLVVHDSEDSICPRTYDITI 180
              P ITII SYF VD+KED  +PY+EKSIK   A QESTH VVHDSED IC RTYDI+I
Sbjct: 121 TMKP-ITIIPSYFAVDKKEDLSLPYVEKSIKLCSATQESTHRVVHDSEDIICLRTYDISI 180

Query: 181 TYDNDLQTFRFWLTGYHENGMPLQPELILEDVRKNHAGKTVNIEDHPYLPGKHASVHPKI 240
           TYDND +TF FWLTGYHE+G PLQPELILEDVRK+H GKTVNIEDHPYLPGKHASVHPKI
Sbjct: 181 TYDNDHRTFHFWLTGYHEDGRPLQPELILEDVRKSHVGKTVNIEDHPYLPGKHASVHPKI 240

Query: 241 HGAAVKKMVENRKSHG 255
           HGAAVKKMV++R S G
Sbjct: 241 HGAAVKKMVKSRMSQG 247

[Close]

BLAST of HG10001858 vs. NCBI nr
Match: TYK16937.1 (autophagy-related protein 3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 334.7 bits (857), Expect = 7.0e-88
Identity = 172/235 (73.19%), Postives = 191/235 (81.28%), Query Frame = 0


Query: 22  IVFTEFDFLAAGNYLVAKCDTWSWKSGDLSKQKSCLPYDKQFLILRDVPCLRRAFSDEEE 81
           ++FTE DF+ AGN+LV   D+WSW+SGDLSKQKS LP DKQFLILR+ PC RRAFS EE 
Sbjct: 1   MLFTETDFITAGNFLVGNFDSWSWESGDLSKQKSYLPSDKQFLILRNAPCPRRAFSYEEG 60

Query: 82  YVIVGGGGEDDDRLLIHGDPSESIDEDNLLSTEESPELERKNPIITIIDSYFGVDRKED- 141
           YVIVG  GED+DRLL     SES D DNLLST+E P+     P ITII SYF VD+KED 
Sbjct: 61  YVIVGSDGEDNDRLL-----SESKDVDNLLSTKELPKPGTMKP-ITIIPSYFAVDKKEDL 120

Query: 142 -VPYMEKSIKSYPAAQESTHLVVHDSEDSICPRTYDITITYDNDLQTFRFWLTGYHENGM 201
            +PY+EKSIK   A QESTH VVHDSED IC RTYDI+ITYDND +TF FWLTGYHE+G 
Sbjct: 121 SLPYVEKSIKLCSATQESTHRVVHDSEDIICLRTYDISITYDNDHRTFHFWLTGYHEDGR 180

Query: 202 PLQPELILEDVRKNHAGKTVNIEDHPYLPGKHASVHPKIHGAAVKKMVENRKSHG 255
           PLQPELILEDVRK+H GKTVNIEDHPYLPGKHASVHPKIHGAAVKKMV++R S G
Sbjct: 181 PLQPELILEDVRKSHVGKTVNIEDHPYLPGKHASVHPKIHGAAVKKMVKSRMSQG 229

[Close]

BLAST of HG10001858 vs. NCBI nr
Match: XP_038879221.1 (LOW QUALITY PROTEIN: autophagy-related protein 3 [Benincasa hispida])

HSP 1 Score: 334.0 bits (855), Expect = 1.2e-87
Identity = 177/253 (69.96%), Postives = 194/253 (76.68%), Query Frame = 0


Query: 1   MIHWLKRITSYCWPSQFKERIIVFTEFDFLAAGNYLVAKCDTWSWKSGDLSKQKSCLPYD 60
           M HW       CWPSQFKER IVFT  DF+ AG++LVAKC +WSW+S DL KQK  LP +
Sbjct: 1   MFHWFN-----CWPSQFKERNIVFTVSDFITAGDFLVAKC-SWSWESDDLIKQKXYLPSN 60

Query: 61  KQFLILRDVPCLRRAFSDEEEYVIVGGGGEDDDRLLIHGDPSESIDEDNLLSTEESPELE 120
           KQF ILR+VPCLRRA S EEEYVI G                ES D DNLLST++  EL+
Sbjct: 61  KQFFILRNVPCLRRALSYEEEYVIAGS--------------DESKDGDNLLSTKKLLELD 120

Query: 121 RKNPIITIIDSYFGVDRKEDVPYMEKSIKSYPAAQESTHLVVHDSEDSICPRTYDITITY 180
             NP IT+I SYFGVD+    PYMEKSIK +PAAQESTHLVVHDSEDSICPRTYDI+ITY
Sbjct: 121 TNNP-ITVIHSYFGVDKN---PYMEKSIKFHPAAQESTHLVVHDSEDSICPRTYDISITY 180

Query: 181 DNDLQTFRFWLTGYHENGMPLQPELILEDVRKNHAGKTVNIEDHPYLPGKHASVHPKIHG 240
           DNDLQTF F  TGY ++GMPLQPELILEDVRKNHAGK VNIEDHPYLPGKHASVHPKI G
Sbjct: 181 DNDLQTFHF-XTGYQKDGMPLQPELILEDVRKNHAGKAVNIEDHPYLPGKHASVHPKILG 228

Query: 241 AAVKKMVENRKSH 254
           AAVKKMVE + SH
Sbjct: 241 AAVKKMVEYQMSH 228

[Close]

BLAST of HG10001858 vs. NCBI nr
Match: KAA0044652.1 (autophagy-related protein 3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 332.8 bits (852), Expect = 2.6e-87
Identity = 171/235 (72.77%), Postives = 191/235 (81.28%), Query Frame = 0


Query: 22  IVFTEFDFLAAGNYLVAKCDTWSWKSGDLSKQKSCLPYDKQFLILRDVPCLRRAFSDEEE 81
           ++FTE DF+ AG++LV   D+WSW+SGDLSKQKS LP DKQFLILR+ PC RRAFS EE 
Sbjct: 1   MLFTETDFITAGHFLVGNFDSWSWESGDLSKQKSYLPSDKQFLILRNAPCPRRAFSYEEG 60

Query: 82  YVIVGGGGEDDDRLLIHGDPSESIDEDNLLSTEESPELERKNPIITIIDSYFGVDRKED- 141
           YVIVG  GED+DRLL     SES D DNLLST+E P+     P ITII SYF VD+KED 
Sbjct: 61  YVIVGSDGEDNDRLL-----SESKDVDNLLSTKELPKPGTMKP-ITIIPSYFAVDKKEDL 120

Query: 142 -VPYMEKSIKSYPAAQESTHLVVHDSEDSICPRTYDITITYDNDLQTFRFWLTGYHENGM 201
            +PY+EKSIK   A QESTH VVHDSED IC RTYDI+ITYDND +TF FWLTGYHE+G 
Sbjct: 121 SLPYVEKSIKLCSATQESTHRVVHDSEDIICLRTYDISITYDNDHRTFHFWLTGYHEDGR 180

Query: 202 PLQPELILEDVRKNHAGKTVNIEDHPYLPGKHASVHPKIHGAAVKKMVENRKSHG 255
           PLQPELILEDVRK+H GKTVNIEDHPYLPGKHASVHPKIHGAAVKKMV++R S G
Sbjct: 181 PLQPELILEDVRKSHVGKTVNIEDHPYLPGKHASVHPKIHGAAVKKMVKSRMSQG 229

[Close]

BLAST of HG10001858 vs. ExPASy Swiss-Prot
Match: Q0WWQ1 (Autophagy-related protein 3 OS=Arabidopsis thaliana OX=3702 GN=ATG3 PE=1 SV=2)

HSP 1 Score: 229.9 bits (585), Expect = 3.2e-59
Identity = 127/265 (47.92%), Postives = 176/265 (66.42%), Query Frame = 0


Query: 5   LKRITSYCWPSQFKERIIVFTEFDFLAAGNYLVAKCDTWSWKSGDLSKQKSCLPYDKQFL 64
           ++RIT     S FKE+ ++    +F+ AG+ LV+KC TWSW+SGD SK+K  LP DKQFL
Sbjct: 15  VERITGPRTISAFKEKGVLSVS-EFVLAGDNLVSKCPTWSWESGDASKRKPYLPSDKQFL 74

Query: 65  ILRDVPCLRRAFSDEEEYVIVGG----GGEDDDR-LLIHGDPSESIDEDNLLSTEESPEL 124
           I R+VPCLRRA S  E+Y   GG      ED+D  L  HG P +   E++ L + ++ ++
Sbjct: 75  ITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGKPKDKGKEEDNLPSMDALDI 134

Query: 125 ERKNPIITIIDSYFGVDRKEDVPYMEK------SIKSYPAAQESTHLVVHDSEDS--ICP 184
             KN I + I +YFG +  +D+P ME+       +++ PA  +ST+LV H+ +D   +  
Sbjct: 135 NEKNTIQS-IPTYFGGEEDDDIPDMEEFDEADNVVENDPATLQSTYLVAHEPDDDNILRT 194

Query: 185 RTYDITITYDNDLQTFRFWLTGYHENGMPLQPELILEDVRKNHAGKTVNIEDHPYLPGKH 244
           RTYD++ITYD   QT R WLTGY E+ M LQPEL++EDV ++HA KTV IEDHP+LPGKH
Sbjct: 195 RTYDLSITYDKYYQTPRVWLTGYDESRMLLQPELVMEDVSQDHARKTVTIEDHPHLPGKH 254

Query: 245 ASVHPKIHGAAVKKMVENRKSHGIE 257
           ASVHP  HGA +KK+++   S G+E
Sbjct: 255 ASVHPCRHGAVMKKIIDVLMSRGVE 277

[Close]

BLAST of HG10001858 vs. ExPASy Swiss-Prot
Match: Q550A8 (Autophagy-related protein 3 OS=Dictyostelium discoideum OX=44689 GN=atg3 PE=3 SV=3)

HSP 1 Score: 137.9 bits (346), Expect = 1.6e-31
Identity = 93/292 (31.85%), Postives = 146/292 (50.00%), Query Frame = 0


Query: 5   LKRITSYCWPSQFKERIIVFTEFDFLAAGNYLVAKCDTWSWKSGDLSKQKSCLPYDKQFL 64
           ++++T     S+F E  ++  E +F+ AG+ L  KC TW+W+SGD S+  S LP +KQFL
Sbjct: 17  VEKVTPTLSTSKFLEEGVLTPE-EFVQAGDLLTDKCQTWTWESGDPSRNVSYLPKEKQFL 76

Query: 65  ILRDVPCLRRAFSDEEE-------YVIVGGGGED---------------DDRLLIHGDPS 124
           + R+VPC  R  + E E        + +   GED               D+++ I     
Sbjct: 77  LTRNVPCYNRVRTLENESKASKADEIQIEDDGEDSWVAPQPVGNQDDIEDEKVDISSLKI 136

Query: 125 ESIDEDNLLSTEESP----------ELERKNPIITIIDSY--FGVDRKEDVPYMEKSIKS 184
           +    +   +T   P          E E ++  I  +D +    +  +ED   + K+ K+
Sbjct: 137 DDKKPNTTTTTTAKPTNNNNNNNDDEDEDEDGDIPDLDDFQDDNIIEEEDPAVLSKNNKT 196

Query: 185 YPAA------QESTHLVVHDSEDSICPRTYDITITYDNDLQTFRFWLTGYHENGMPLQPE 244
                       ++   V D+++ +  RTYDI+ITYD   QT R WL GY EN  PL+PE
Sbjct: 197 TTTTTANNNNNNNSENKVEDNDNILRTRTYDISITYDKYYQTPRVWLFGYDENRKPLKPE 256

Query: 245 LILEDVRKNHAGKTVNIEDHPYLPGKHASVHPKIHGAAVKKMVENRKSHGIE 257
            I ED+ ++HA KTV I+ HP+L    A +HP  H A +KK+V+ +  +G E
Sbjct: 257 EIFEDISEDHAHKTVTIDSHPHLGISFAYIHPCRHAAVMKKLVDRQSENGKE 307

[Close]

BLAST of HG10001858 vs. ExPASy Swiss-Prot
Match: Q9CPX6 (Ubiquitin-like-conjugating enzyme ATG3 OS=Mus musculus OX=10090 GN=Atg3 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.9e-30
Identity = 91/260 (35.00%), Postives = 132/260 (50.77%), Query Frame = 0


Query: 15  SQFKERIIVFTEFDFLAAGNYLVAKCDTWSWKSGDLSKQKSCLPYDKQFLILRDVPCLRR 74
           S+FKE  ++  E +F+AAG++LV  C TW W +G+  K K+ LP DKQFL+ ++VPC +R
Sbjct: 26  SKFKETGVITPE-EFVAAGDHLVHHCPTWQWATGEELKVKAYLPTDKQFLVTKNVPCYKR 85

Query: 75  A----FSDEEEYVIVGGGGEDDDRLLIHGDPSESIDE---DNLLSTEESPELERKNPIIT 134
                +SDE E +I    G+       H      I E   +  L +++S +L+  + +  
Sbjct: 86  CKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITGITEAVKEITLESKDSIKLQDCSALCD 145

Query: 135 IIDSYFGVDRKEDVPYMEKSIKSYPAAQESTHLVVH--------DSEDSIC-PRTYDITI 194
             D     +  +   Y E  +     A   T  +V           ED+I   RTYD+ I
Sbjct: 146 EEDEEDEGEAADMEEYEESGLLETDEATLDTRKIVEACKAKADAGGEDAILQTRTYDLYI 205

Query: 195 TYDNDLQTFRFWLTGYHENGMPLQPELILEDVRKNHAGKTVNIEDHPYL-PGKHASVHPK 254
           TYD   QT R WL GY E   PL  E + ED+ ++H  KTV IE+HP+L P    SVHP 
Sbjct: 206 TYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPC 265

Query: 255 IHGAAVKKMVENRKSHGIEV 258
            H   +KK++E     G E+
Sbjct: 266 RHAEVMKKIIETVAEGGGEL 284

[Close]

BLAST of HG10001858 vs. ExPASy Swiss-Prot
Match: Q6GQE7 (Ubiquitin-like-conjugating enzyme ATG3 OS=Xenopus laevis OX=8355 GN=atg3 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.5e-29
Identity = 93/264 (35.23%), Postives = 129/264 (48.86%), Query Frame = 0


Query: 15  SQFKERIIVFTEFDFLAAGNYLVAKCDTWSWKSGDLSKQKSCLPYDKQFLILRDVPCLRR 74
           S+FKE  ++  E +FLAAG++LV  C TW W +G+ SK K  LP DKQFL+ ++VPC +R
Sbjct: 26  SKFKETGVITPE-EFLAAGDHLVHHCPTWQWSAGEESKIKPYLPNDKQFLMTKNVPCYKR 85

Query: 75  A----FSDEEEYVIVGGGGEDDDRLLIHGDPSESIDEDNLLSTEESPELERKNPIITIID 134
                +SDE+E +I    G+       H      + E     T E+ +  +    I + D
Sbjct: 86  CKQMEYSDEQEAIIEEDDGDGGWVDTFHHTGLSGVTEAVKEITLETQDCGKTTDNIAVCD 145

Query: 135 ---------------SYFGVDRKEDVPYMEKSIKSYPAAQESTHLVVHDSEDSIC-PRTY 194
                             G+   +D       IK   A +    L     ED+I   RTY
Sbjct: 146 DDDDDEGEAADMEDYEESGLLENDDATVDTSKIKE--ACKPKADL---GGEDAILQTRTY 205

Query: 195 DITITYDNDLQTFRFWLTGYHENGMPLQPELILEDVRKNHAGKTVNIEDHPYL-PGKHAS 254
           D+ ITYD   QT R WL GY E   PL  E + ED+ ++H  KTV IE+HP+L P    S
Sbjct: 206 DLYITYDKYYQTPRLWLFGYDEQRRPLAVENMYEDISQDHVKKTVTIENHPHLPPPPMCS 265

Query: 255 VHPKIHGAAVKKMVENRKSHGIEV 258
           VHP  H   +KK++E     G E+
Sbjct: 266 VHPCRHAEVMKKIIETVAEGGGEL 283

[Close]

BLAST of HG10001858 vs. ExPASy Swiss-Prot
Match: Q5I0S6 (Ubiquitin-like-conjugating enzyme ATG3 OS=Xenopus tropicalis OX=8364 GN=atg3 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.5e-29
Identity = 95/266 (35.71%), Postives = 130/266 (48.87%), Query Frame = 0


Query: 15  SQFKERIIVFTEFDFLAAGNYLVAKCDTWSWKSGDLSKQKSCLPYDKQFLILRDVPCLRR 74
           S+FKE  ++  E +FLAAG++LV  C TW W +G+ SK K  LP DKQFL+ ++VPC +R
Sbjct: 26  SKFKETGVITPE-EFLAAGDHLVHHCPTWQWSAGEESKIKPYLPNDKQFLMTKNVPCYKR 85

Query: 75  A----FSDEEEYVIVGGGGEDDDRLLIHGDPSESIDEDNLLSTEESPELERKNPIITIID 134
                +SDE+E +I     E+DD     G   ++        TE   E+  +        
Sbjct: 86  CKQMEYSDEQEAII-----EEDDG---DGGWVDTFHHSLTGVTEAVKEITLETQDCGKTT 145

Query: 135 SYFGVDRKED---------VPYMEKSIKSYPAAQESTHLVVH--------DSEDSIC-PR 194
           S   VD  +D           Y E  +     A   T  +            ED+I   R
Sbjct: 146 SNIAVDDDDDDDEGEAADMEDYEESGLLDNDDATVDTSKIKEACKPKADLGGEDAILQTR 205

Query: 195 TYDITITYDNDLQTFRFWLTGYHENGMPLQPELILEDVRKNHAGKTVNIEDHPYL-PGKH 254
           TYD+ ITYD   QT R WL GY E   PL  E + ED+ ++H  KTV IE+HP+L P   
Sbjct: 206 TYDLYITYDKYYQTPRLWLFGYDEQRRPLTVENMYEDISQDHVKKTVTIENHPHLPPPPM 265

Query: 255 ASVHPKIHGAAVKKMVENRKSHGIEV 258
            SVHP  H   +KK++E     G E+
Sbjct: 266 CSVHPCRHAEVMKKIIETVAEGGGEL 282

[Close]

BLAST of HG10001858 vs. ExPASy TrEMBL
Match: A0A0A0KUC8 (Autophagy_act_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G022890 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 2.0e-93
Identity = 183/256 (71.48%), Postives = 203/256 (79.30%), Query Frame = 0


Query: 1   MIHWLKRITSYCWPSQFKERIIVFTEFDFLAAGNYLVAKCDTWSWKSGDLSKQKSCLPYD 60
           M+HW      +  PSQ +E+ IVFTE DF+ AGN+LV   D+WSW+SGDLSKQKS LP D
Sbjct: 1   MVHW---FGIFRLPSQNREKTIVFTEADFITAGNFLVGNSDSWSWESGDLSKQKSNLPSD 60

Query: 61  KQFLILRDVPCLRRAFSDEEEYVIVGGGGEDDDRLLIHGDPSESIDEDNLLSTEESPELE 120
           KQFLILR+ PCLRRAFS +EEYVIVG  GED+ RLL     SES DEDNLLST+E P+  
Sbjct: 61  KQFLILRNAPCLRRAFSYKEEYVIVGSDGEDNARLL-----SESKDEDNLLSTKELPKPG 120

Query: 121 RKNPIITIIDSYFGVDRKED--VPYMEKSIKSYPAAQESTHLVVHDSEDSICPRTYDITI 180
              P ITII SYF VD+KED  +PYMEKSIK   A QESTH VVHDSED IC RTYDI+I
Sbjct: 121 TMKP-ITIIPSYFAVDKKEDLPLPYMEKSIKLCSATQESTHRVVHDSEDIICLRTYDISI 180

Query: 181 TYDNDLQTFRFWLTGYHENGMPLQPELILEDVRKNHAGKTVNIEDHPYLPGKHASVHPKI 240
           TYDND QTFRFWLTGYHE+G PLQPELI EDVR++H GKTVNIEDHPYLPGKHASVHPKI
Sbjct: 181 TYDNDHQTFRFWLTGYHEDGRPLQPELIFEDVRQSHVGKTVNIEDHPYLPGKHASVHPKI 240

Query: 241 HGAAVKKMVENRKSHG 255
           HGAAVKKMV+ R S G
Sbjct: 241 HGAAVKKMVKCRMSQG 247

[Close]

BLAST of HG10001858 vs. ExPASy TrEMBL
Match: A0A1S3BWT8 (autophagy-related protein 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494478 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 7.8e-93
Identity = 180/256 (70.31%), Postives = 202/256 (78.91%), Query Frame = 0


Query: 1   MIHWLKRITSYCWPSQFKERIIVFTEFDFLAAGNYLVAKCDTWSWKSGDLSKQKSCLPYD 60
           M+HW  +      PSQ +ER ++FTE DF+ AGN+LV   D+WSW+SGDLSKQKS LP D
Sbjct: 1   MVHWFGKFRR---PSQIRERTMLFTETDFITAGNFLVGNFDSWSWESGDLSKQKSYLPSD 60

Query: 61  KQFLILRDVPCLRRAFSDEEEYVIVGGGGEDDDRLLIHGDPSESIDEDNLLSTEESPELE 120
           KQFLILR+ PC RRAFS EE YVIVG  GED+DRLL     SES D DNLLST+E P+  
Sbjct: 61  KQFLILRNAPCPRRAFSYEEGYVIVGSDGEDNDRLL-----SESKDVDNLLSTKELPKPG 120

Query: 121 RKNPIITIIDSYFGVDRKED--VPYMEKSIKSYPAAQESTHLVVHDSEDSICPRTYDITI 180
              P ITII SYF VD+KED  +PY+EKSIK   A QESTH VVHDSED IC RTYDI+I
Sbjct: 121 TMKP-ITIIPSYFAVDKKEDLSLPYVEKSIKLCSATQESTHRVVHDSEDIICLRTYDISI 180

Query: 181 TYDNDLQTFRFWLTGYHENGMPLQPELILEDVRKNHAGKTVNIEDHPYLPGKHASVHPKI 240
           TYDND +TF FWLTGYHE+G PLQPELILEDVRK+H GKTVNIEDHPYLPGKHASVHPKI
Sbjct: 181 TYDNDHRTFHFWLTGYHEDGRPLQPELILEDVRKSHVGKTVNIEDHPYLPGKHASVHPKI 240

Query: 241 HGAAVKKMVENRKSHG 255
           HGAAVKKMV++R S G
Sbjct: 241 HGAAVKKMVKSRMSQG 247

[Close]

BLAST of HG10001858 vs. ExPASy TrEMBL
Match: A0A5D3CYX9 (Autophagy-related protein 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00740 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 3.4e-88
Identity = 172/235 (73.19%), Postives = 191/235 (81.28%), Query Frame = 0


Query: 22  IVFTEFDFLAAGNYLVAKCDTWSWKSGDLSKQKSCLPYDKQFLILRDVPCLRRAFSDEEE 81
           ++FTE DF+ AGN+LV   D+WSW+SGDLSKQKS LP DKQFLILR+ PC RRAFS EE 
Sbjct: 1   MLFTETDFITAGNFLVGNFDSWSWESGDLSKQKSYLPSDKQFLILRNAPCPRRAFSYEEG 60

Query: 82  YVIVGGGGEDDDRLLIHGDPSESIDEDNLLSTEESPELERKNPIITIIDSYFGVDRKED- 141
           YVIVG  GED+DRLL     SES D DNLLST+E P+     P ITII SYF VD+KED 
Sbjct: 61  YVIVGSDGEDNDRLL-----SESKDVDNLLSTKELPKPGTMKP-ITIIPSYFAVDKKEDL 120

Query: 142 -VPYMEKSIKSYPAAQESTHLVVHDSEDSICPRTYDITITYDNDLQTFRFWLTGYHENGM 201
            +PY+EKSIK   A QESTH VVHDSED IC RTYDI+ITYDND +TF FWLTGYHE+G 
Sbjct: 121 SLPYVEKSIKLCSATQESTHRVVHDSEDIICLRTYDISITYDNDHRTFHFWLTGYHEDGR 180

Query: 202 PLQPELILEDVRKNHAGKTVNIEDHPYLPGKHASVHPKIHGAAVKKMVENRKSHG 255
           PLQPELILEDVRK+H GKTVNIEDHPYLPGKHASVHPKIHGAAVKKMV++R S G
Sbjct: 181 PLQPELILEDVRKSHVGKTVNIEDHPYLPGKHASVHPKIHGAAVKKMVKSRMSQG 229

[Close]

BLAST of HG10001858 vs. ExPASy TrEMBL
Match: A0A5A7TMW7 (Autophagy-related protein 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004070 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.3e-87
Identity = 171/235 (72.77%), Postives = 191/235 (81.28%), Query Frame = 0


Query: 22  IVFTEFDFLAAGNYLVAKCDTWSWKSGDLSKQKSCLPYDKQFLILRDVPCLRRAFSDEEE 81
           ++FTE DF+ AG++LV   D+WSW+SGDLSKQKS LP DKQFLILR+ PC RRAFS EE 
Sbjct: 1   MLFTETDFITAGHFLVGNFDSWSWESGDLSKQKSYLPSDKQFLILRNAPCPRRAFSYEEG 60

Query: 82  YVIVGGGGEDDDRLLIHGDPSESIDEDNLLSTEESPELERKNPIITIIDSYFGVDRKED- 141
           YVIVG  GED+DRLL     SES D DNLLST+E P+     P ITII SYF VD+KED 
Sbjct: 61  YVIVGSDGEDNDRLL-----SESKDVDNLLSTKELPKPGTMKP-ITIIPSYFAVDKKEDL 120

Query: 142 -VPYMEKSIKSYPAAQESTHLVVHDSEDSICPRTYDITITYDNDLQTFRFWLTGYHENGM 201
            +PY+EKSIK   A QESTH VVHDSED IC RTYDI+ITYDND +TF FWLTGYHE+G 
Sbjct: 121 SLPYVEKSIKLCSATQESTHRVVHDSEDIICLRTYDISITYDNDHRTFHFWLTGYHEDGR 180

Query: 202 PLQPELILEDVRKNHAGKTVNIEDHPYLPGKHASVHPKIHGAAVKKMVENRKSHG 255
           PLQPELILEDVRK+H GKTVNIEDHPYLPGKHASVHPKIHGAAVKKMV++R S G
Sbjct: 181 PLQPELILEDVRKSHVGKTVNIEDHPYLPGKHASVHPKIHGAAVKKMVKSRMSQG 229

[Close]

BLAST of HG10001858 vs. ExPASy TrEMBL
Match: A0A1S3BXC0 (autophagy-related protein 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103494478 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 8.1e-74
Identity = 149/224 (66.52%), Postives = 171/224 (76.34%), Query Frame = 0


Query: 1   MIHWLKRITSYCWPSQFKERIIVFTEFDFLAAGNYLVAKCDTWSWKSGDLSKQKSCLPYD 60
           M+HW  +      PSQ +ER ++FTE DF+ AGN+LV   D+WSW+SGDLSKQKS LP D
Sbjct: 1   MVHWFGKFRR---PSQIRERTMLFTETDFITAGNFLVGNFDSWSWESGDLSKQKSYLPSD 60

Query: 61  KQFLILRDVPCLRRAFSDEEEYVIVGGGGEDDDRLLIHGDPSESIDEDNLLSTEESPELE 120
           KQFLILR+ PC RRAFS EE YVIVG  GED+DRLL     SES D DNLLST+E P+  
Sbjct: 61  KQFLILRNAPCPRRAFSYEEGYVIVGSDGEDNDRLL-----SESKDVDNLLSTKELPKPG 120

Query: 121 RKNPIITIIDSYFGVDRKED--VPYMEKSIKSYPAAQESTHLVVHDSEDSICPRTYDITI 180
              P ITII SYF VD+KED  +PY+EKSIK   A QESTH VVHDSED IC RTYDI+I
Sbjct: 121 TMKP-ITIIPSYFAVDKKEDLSLPYVEKSIKLCSATQESTHRVVHDSEDIICLRTYDISI 180

Query: 181 TYDNDLQTFRFWLTGYHENGMPLQPELILEDVRKNHAGKTVNIE 223
           TYDND +TF FWLTGYHE+G PLQPELILEDVRK+H GKTV ++
Sbjct: 181 TYDNDHRTFHFWLTGYHEDGRPLQPELILEDVRKSHVGKTVALQ 215

[Close]

BLAST of HG10001858 vs. TAIR 10
Match: AT5G61500.1 (autophagy 3 (APG3) )

HSP 1 Score: 229.9 bits (585), Expect = 2.3e-60
Identity = 127/265 (47.92%), Postives = 176/265 (66.42%), Query Frame = 0


Query: 5   LKRITSYCWPSQFKERIIVFTEFDFLAAGNYLVAKCDTWSWKSGDLSKQKSCLPYDKQFL 64
           ++RIT     S FKE+ ++    +F+ AG+ LV+KC TWSW+SGD SK+K  LP DKQFL
Sbjct: 15  VERITGPRTISAFKEKGVLSVS-EFVLAGDNLVSKCPTWSWESGDASKRKPYLPSDKQFL 74

Query: 65  ILRDVPCLRRAFSDEEEYVIVGG----GGEDDDR-LLIHGDPSESIDEDNLLSTEESPEL 124
           I R+VPCLRRA S  E+Y   GG      ED+D  L  HG P +   E++ L + ++ ++
Sbjct: 75  ITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGKPKDKGKEEDNLPSMDALDI 134

Query: 125 ERKNPIITIIDSYFGVDRKEDVPYMEK------SIKSYPAAQESTHLVVHDSEDS--ICP 184
             KN I + I +YFG +  +D+P ME+       +++ PA  +ST+LV H+ +D   +  
Sbjct: 135 NEKNTIQS-IPTYFGGEEDDDIPDMEEFDEADNVVENDPATLQSTYLVAHEPDDDNILRT 194

Query: 185 RTYDITITYDNDLQTFRFWLTGYHENGMPLQPELILEDVRKNHAGKTVNIEDHPYLPGKH 244
           RTYD++ITYD   QT R WLTGY E+ M LQPEL++EDV ++HA KTV IEDHP+LPGKH
Sbjct: 195 RTYDLSITYDKYYQTPRVWLTGYDESRMLLQPELVMEDVSQDHARKTVTIEDHPHLPGKH 254

Query: 245 ASVHPKIHGAAVKKMVENRKSHGIE 257
           ASVHP  HGA +KK+++   S G+E
Sbjct: 255 ASVHPCRHGAVMKKIIDVLMSRGVE 277

The following BLAST results are available for this feature:

BLAST of HG10001858 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146945.2	4.2e-93	71.48	autophagy-related protein 3 [Cucumis sativus] >KAE8649136.1 hypothetical protein...	[more]
XP_008453898.1	1.6e-92	70.31	PREDICTED: autophagy-related protein 3 isoform X1 [Cucumis melo]	[more]
TYK16937.1	7.0e-88	73.19	autophagy-related protein 3 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_038879221.1	1.2e-87	69.96	LOW QUALITY PROTEIN: autophagy-related protein 3 [Benincasa hispida]	[more]
KAA0044652.1	2.6e-87	72.77	autophagy-related protein 3 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of HG10001858 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WWQ1	3.2e-59	47.92	Autophagy-related protein 3 OS=Arabidopsis thaliana OX=3702 GN=ATG3 PE=1 SV=2	[more]
Q550A8	1.6e-31	31.85	Autophagy-related protein 3 OS=Dictyostelium discoideum OX=44689 GN=atg3 PE=3 SV...	[more]
Q9CPX6	6.9e-30	35.00	Ubiquitin-like-conjugating enzyme ATG3 OS=Mus musculus OX=10090 GN=Atg3 PE=1 SV=...	[more]
Q6GQE7	1.5e-29	35.23	Ubiquitin-like-conjugating enzyme ATG3 OS=Xenopus laevis OX=8355 GN=atg3 PE=2 SV...	[more]
Q5I0S6	4.5e-29	35.71	Ubiquitin-like-conjugating enzyme ATG3 OS=Xenopus tropicalis OX=8364 GN=atg3 PE=...	[more]

BLAST of HG10001858 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUC8	2.0e-93	71.48	Autophagy_act_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G02...	[more]
A0A1S3BWT8	7.8e-93	70.31	autophagy-related protein 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494478 P...	[more]
A0A5D3CYX9	3.4e-88	73.19	Autophagy-related protein 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7TMW7	1.3e-87	72.77	Autophagy-related protein 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BXC0	8.1e-74	66.52	autophagy-related protein 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103494478 P...	[more]

BLAST of HG10001858 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61500.1	2.3e-60	47.92	autophagy 3 (APG3)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007135	Ubiquitin-like-conjugating enzyme Atg3/Atg10	PFAM	PF03987	Autophagy_act_C	coord: 29..252 e-value: 7.0E-35 score: 120.9
IPR007135	Ubiquitin-like-conjugating enzyme Atg3/Atg10	PANTHER	PTHR12866	UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3	coord: 4..257
None	No IPR available	PANTHER	PTHR12866:SF2	UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3	coord: 4..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10001858.1	HG10001858.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000045	autophagosome assembly
biological_process	GO:0000422	autophagy of mitochondrion
biological_process	GO:0044804	autophagy of nucleus
cellular_component	GO:0000153	cytoplasmic ubiquitin ligase complex
cellular_component	GO:0005829	cytosol
molecular_function	GO:0019776	Atg8 ligase activity
molecular_function	GO:0019787	ubiquitin-like protein transferase activity