HG10001791 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10001791
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRibonuclease
LocationChr11: 477936 .. 481545 (+)
RNA-Seq ExpressionHG10001791
SyntenyHG10001791
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCGCAATATCCACTCCCAAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAAGCTGGTCGAGGCCCTGTTTTAGGTTTTCTATATTCCTATTCGTTTCGTTCCACTTCTGCCTCTTTAATTCCGCTTCGATCATCATTTTTTGGGACATGATTTTGAATACACTTTTCTTTCTGAAATATTACTGCATTTGATCTCAGGGCCAATGGTGTATGGATGCTTGTACTGCGCTACTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGGTTTAGCTTGTTTGCAATTTTCCCGCTTCTATCGATTTTCTTTTAACTGTTGTCCATCATTTCCCTATTTCGTTTACTTTTCTTCCAACTTTTGATGTTTTGCATGTAGACTCAAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCTAACGAGTCAATTGGCTGGGCTGTTGATGTCATAGATCCTCGAGAACTTTCATCCAAAATGCTGAACAAGTCAGTCTTTAGTGTTTTATAAATTCTTCCGTTTGCATAAATACTCTAATTTTCACTTTACCTATTCAGTTCGACGGTATAGAGAATTGAACTTAGCTGAAATCTCGTCTTTCTTGAGAAATAGTACTACTTAAGTTGATAATGGGTAAACTTTATATATATTTGTACATGAATTGGTCTTATTAATTCACCACTAGACCCAAAAACTCAAAAACTTGAGTTGATTGATTAAGATAAATGTTGTATTTTTTATATTTATTTTAACTAATGGAAGGTAAGGGAACCTATCTTCATTCAGAGTTAGGAAGAGTCAGCAAAAGACTGGAGCATGGATAATGATGCTTTCCCTCCCCCTTCTATTTTTGTTAACTTATGCACATCAAAGGGTGGGTGACTATGGCTTGGACTAAAGTATTGTTTTTTCTTACTTTATTGGTGAACAGAGTAAAGATAAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTGGTCACCAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGGTAACTCTCTCCCTGGTTTCTTCATTGATTGATGAAAAGAAACTCAAATTTTTAAGGATACAGTCTCCCAATAGAGAAAGCAGATGAAACTAACAAGGGAAGTCCAATGGATGGCCTCTGGTAACTTCCAGTTATCTACGATCATGATTCTATTGATATCATTTGGAGAAGAGAGAGCATGTGGAATCTTGAACTTCATATGTTATCATTTCATAAGTTCTTTTGGGAGGGAAAAATATAAATTTAAAAAAAGAAATCAAACTACAGATTATTTTCGATGCCTTTCTCTTGTTAATTATAGATCTACACCAAAGTCAACGAGAAGGTAAATGAACCAGTTTTATATCTTGATTACAGTAGCAGGGTGTGACACATTCTTTTTGAGGAAGATCTGTAAGAATTAAATTCTGGAAAGCTATATTCTCGATCTTTTCAAGTCTATAAGCTGGAGGGAAAGAAAATCCGCATTCAGCATATCTCATCTTTCATTGCCTTAAAGTTTTTTTTGTTATCCATTGATGATTTGAAGTCATTTGCAGATTTGTTCTGCCCATTCTTCTTTCAGACTCCATGCATCCAACCTTACCTTAGGGTGCCCCATGAACGATGTTAGATTAATCACTTCCATTTATTTTCAGGTTTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGAATTAAGTTGTCTGAAAAATTTCCCAATGTAAAATTTGTAGTTGCAAAGAAAGCTGATAGTTTATATCCCGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTAATGCTAATGCTTCCTTTGAAGATATAGCATTCCAACTGTTTCCCACATTTAAATTCATCAATTTGACTCCAAAAAAATAAAAATCATCAATTTGACTTGTAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGGTCAATTTCATCTGCTAAATATTTTTTTGCAGCATACTATAATCAGGTTTTCATTGCACAGGGTAAAATCAATAATGCTTTTATGATTTAATCTATATAGATCCAACAACTAAATGTTGGCTAGAAGATCACAAGCACTCGGTGTTTGGGTTCCCCACATTAGTCCGCTTCAGTTGGGGTACCTGCAGTTCATATTTCAAAGACGTTGTTGAAGTATCATGGTTAGTTCTTACTCTGCCTTGTAAGAATTGTAGTTCTTTGCAGAATTAGCTCATTAAGCTATATACAATTTCTTTTATGTTCTCCACTGTATAGAAAGGACAGGCTTTTGTTCTGATCTGTTTGCCTCATGATACCATTATGTATGATGGACGTGGTGTAAATTCTCTTATCCTTCATATTTTTGTGATTATAGCCTTCCATCTCTTATAGCACATTGGAATTGTTTTTGTAAATCATTTGTCATGTTTTGTCATATTTTGTAATTTTATCTTATCAATGTAATGAAGGATAATTTTTTCATTTAAAAAAAAAGATGGACGAATTTCATACTTTTCAGAAATATTTTCACACAATCAAATTATCAGTAATTTAGTTAAAAAAACAGACCACTGTGTTATTAAAAGTTCAAGTATCCTTGTCCAAAATATTGTTAGTTGTCACAACATCCATATAGCACTAGGTATGGTGTGATAAGTGCTTTAGTTGTTGGTGGTGGGATTGATTTAATGAAAGCACTGTCTTAAAATATGTTTGAATATCATATGGAATTTAGTAATTAATGATAGACACTTTTTTTTTTATTAATGTAGTGCACTTCTCATTTTTGCTGAAACATCATCCTGCTCTGATGCGTTGGGATGTTAAGATCTTTCCCATTCTAAATTTTAACTTGATTTGTTCATTGGAAATGAATGGTTGTACCTTTATTCTAGTCTATAGTTATTGTACAATAGTTGGACTTCCAAACAGTTTGGGTTCGTTCCTGATGTCTACTTCTTGATACACTTAGGTTCATTTTGTTGTGTTCGGGTTTATTTACCTACACATTGACTGATCTCATGGGACAATTTTCTCTTTCTAAACATTTCATTGTTAAGAAACTCACAAGATTGTTGTATTCTAAGTAGGTGGCCCTGGCATTCATAACATTGAAACCTATCTTTCAAAATCCTGTGCCACATGGTTACGCGTAGTTTATTTTCATCAATTTCGCTTCTTGTAAATCATCAAATATCATAATCTGATTTATTTGTTTTCCTGTAAGCTGACAATTAGATGCCAAAACTTTTGATACTTCCCTGACAGTCTCACAAACTCAAATTTGACTTTGTTATTAATTTCTTTTGATTTATTCACAGCGATGTCATATTATTATTATTATTATTATTATTATTGTTTATATGCTTGATTTACAGGGAGTCGGATAAAGTGGATGAAGGTGGGGCAACGTCTGGAAGTGGTAAGAAACAATTAAGACTAAGGAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGGCAAAGGACGATGCAAGTTTTTCCAGGCTAGAAAACTTGAACAACTCACTCATTTTTGA

mRNA sequence

ATGTCTTCGCAATATCCACTCCCAAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAAGCTGGTCGAGGCCCTGTTTTAGGGCCAATGGTGTATGGATGCTTGTACTGCGCTACTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGACTCAAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCTAACGAGTCAATTGGCTGGGCTGTTGATGTCATAGATCCTCGAGAACTTTCATCCAAAATGCTGAACAAAGTAAAGATAAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTGGTCACCAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGAATTAAGTTGTCTGAAAAATTTCCCAATGTAAAATTTGTAGTTGCAAAGAAAGCTGATAGTTTATATCCCGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGCTAGAAGATCACAAGCACTCGGTGTTTGGGTTCCCCACATTAGTCCGCTTCAGTTGGGGTACCTGCAGTTCATATTTCAAAGACGTTGTTGAAGTATCATGGGAGTCGGATAAAGTGGATGAAGGTGGGGCAACGTCTGGAAGTGGTAAGAAACAATTAAGACTAAGGAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGGCAAAGGACGATGCAAGTTTTTCCAGGCTAGAAAACTTGAACAACTCACTCATTTTTGA

Coding sequence (CDS)

ATGTCTTCGCAATATCCACTCCCAAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAAGCTGGTCGAGGCCCTGTTTTAGGGCCAATGGTGTATGGATGCTTGTACTGCGCTACTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGACTCAAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCTAACGAGTCAATTGGCTGGGCTGTTGATGTCATAGATCCTCGAGAACTTTCATCCAAAATGCTGAACAAAGTAAAGATAAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTGGTCACCAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGAATTAAGTTGTCTGAAAAATTTCCCAATGTAAAATTTGTAGTTGCAAAGAAAGCTGATAGTTTATATCCCGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGCTAGAAGATCACAAGCACTCGGTGTTTGGGTTCCCCACATTAGTCCGCTTCAGTTGGGGTACCTGCAGTTCATATTTCAAAGACGTTGTTGAAGTATCATGGGAGTCGGATAAAGTGGATGAAGGTGGGGCAACGTCTGGAAGTGGTAAGAAACAATTAAGACTAAGGAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGGCAAAGGACGATGCAAGTTTTTCCAGGCTAGAAAACTTGAACAACTCACTCATTTTTGA

Protein sequence

MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVSWESDKVDEGGATSGSGKKQLRLRNVGITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF
Homology
[Close]
BLAST of HG10001791 vs. NCBI nr
Match: XP_038902264.1 (ribonuclease H2 subunit A [Benincasa hispida])

HSP 1 Score: 584.3 bits (1505), Expect = 5.8e-163
Identity = 286/297 (96.30%), Postives = 294/297 (98.99%), Query Frame = 0 

Query: 1   MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEE 60
           MSSQYP+PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCA+SYLKELSSLNFADSKTLKEE
Sbjct: 1   MSSQYPVPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLG+GVL
Sbjct: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGIGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFP+VKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPSVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTC+SYFKD+VEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWE 240

Query: 241 SDKVDEGGATSGSGKKQLRLRNVGITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF 298
           SDKVDE GAT+GSGKKQLRL +VGITTSKRKSEEIESN KGRCKFFQARKLEQLTHF
Sbjct: 241 SDKVDEDGATTGSGKKQLRLSSVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF 297

[Close]
BLAST of HG10001791 vs. NCBI nr
Match: XP_023527419.1 (ribonuclease H2 subunit A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 578.9 bits (1491), Expect = 2.4e-161
Identity = 285/297 (95.96%), Postives = 288/297 (96.97%), Query Frame = 0 

Query: 1   MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEE 60
           MSSQ PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEE
Sbjct: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL
Sbjct: 61  KREELFEGLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDR LR+WA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTC+SYFKD+VEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWE 240

Query: 241 SDKVDEGGATSGSGKKQLRLRNVGITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF 298
           SDKVDE GAT GSGKKQLRL NVGITTSKRKSEEIESN KGRCKFFQARKLEQLTHF
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF 297

[Close]
BLAST of HG10001791 vs. NCBI nr
Match: XP_022979887.1 (ribonuclease H2 subunit A [Cucurbita maxima])

HSP 1 Score: 576.2 bits (1484), Expect = 1.6e-160
Identity = 283/297 (95.29%), Postives = 288/297 (96.97%), Query Frame = 0 

Query: 1   MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEE 60
           MSSQ PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEE
Sbjct: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL
Sbjct: 61  KREELFEGLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPNVKFVV+KKADSLYPVVSGASIVAKVTRDR LR+WA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVSKKADSLYPVVSGASIVAKVTRDRVLRDWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFP+LVRFSWGTC+SYFKD+VEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPSLVRFSWGTCTSYFKDIVEVSWE 240

Query: 241 SDKVDEGGATSGSGKKQLRLRNVGITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF 298
           SDKVDE GAT GSGKKQLRL NVGITTSKRKSEEIESN KGRCKFFQARKLEQLTHF
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF 297

[Close]
BLAST of HG10001791 vs. NCBI nr
Match: XP_022955431.1 (ribonuclease H2 subunit A [Cucurbita moschata])

HSP 1 Score: 575.5 bits (1482), Expect = 2.7e-160
Identity = 283/297 (95.29%), Postives = 286/297 (96.30%), Query Frame = 0 

Query: 1   MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEE 60
           MSSQ PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSK LKEE
Sbjct: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL
Sbjct: 61  KREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDR LR+WA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTC+SYFKD+VEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWE 240

Query: 241 SDKVDEGGATSGSGKKQLRLRNVGITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF 298
           SDKVDE GAT GSGKKQLRL NVGITTSKRKSEEIESN KGRCKFFQARKLEQLTHF
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF 297

[Close]
BLAST of HG10001791 vs. NCBI nr
Match: KAG6582048.1 (Ribonuclease H2 subunit A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 574.3 bits (1479), Expect = 6.0e-160
Identity = 283/297 (95.29%), Postives = 286/297 (96.30%), Query Frame = 0 

Query: 1   MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEE 60
           MSSQ PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEE
Sbjct: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL
Sbjct: 61  KREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDR LR+WA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTC+SYFKD+VEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWE 240

Query: 241 SDKVDEGGATSGSGKKQLRLRNVGITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF 298
           SDKVDE GAT GSGKKQLRL NVGITTSKRKSEEIESN KGRCKFFQARKLEQLT F
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTQF 297

[Close]
BLAST of HG10001791 vs. ExPASy Swiss-Prot
Match: Q9SEZ6 (Ribonuclease H2 subunit A OS=Arabidopsis thaliana OX=3702 GN=At2g25100 PE=2 SV=2)

HSP 1 Score: 444.9 bits (1143), Expect = 7.2e-124
Identity = 211/297 (71.04%), Postives = 256/297 (86.20%), Query Frame = 0 

Query: 1   MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEE 60
           M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEE
Sbjct: 1   MESECLTPEWASQPCLMGIDEAGRGPVLGPMVYGCMYCPISYQSSLASLHFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREEL+E LK ++S+GWAVDVIDPRELS+KML K K NLNEISH+SAMGL+ +VL MGVL
Sbjct: 61  KREELYESLKLDKSLGWAVDVIDPRELSAKMLAKNKTNLNEISHNSAMGLIKRVLDMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTE Y+DTVGDP+KYRIKLSE+FP++KFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW 
Sbjct: 121 LTEAYLDTVGDPDKYRIKLSERFPSIKFVVSKKADSLFPIVSGASIVAKVTRDRALKEWL 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVSWE 240
           +EET E+++RNFGSGYPGDP TK WL  HKHSVFGFP+LVRFSWGTC+++ K  VEV+WE
Sbjct: 181 VEETGEDINRNFGSGYPGDPETKAWLVQHKHSVFGFPSLVRFSWGTCTTHLKGEVEVAWE 240

Query: 241 SDKVDEGGATSGSGKKQLRLRNVGITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF 298
           +D+ +E G    S K+Q +L + G  T +++SEEIES+GKGRCKF QARK++QLT F
Sbjct: 241 ADENEESG-NGSSSKRQAKLSSFGFKTCEKRSEEIESSGKGRCKFLQARKIQQLTQF 296

[Close]
BLAST of HG10001791 vs. ExPASy Swiss-Prot
Match: O75792 (Ribonuclease H2 subunit A OS=Homo sapiens OX=9606 GN=RNASEH2A PE=1 SV=2)

HSP 1 Score: 254.6 bits (649), Expect = 1.4e-66
Identity = 132/292 (45.21%), Postives = 182/292 (62.33%), Query Frame = 0 

Query: 6   PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREE 65
           P+P    K PCV+G+DEAGRGPVLGPMVY   YC    L +L +L  ADSKTL E +RE 
Sbjct: 19  PVPAVCRKEPCVLGVDEAGRGPVLGPMVYAICYCPLPRLADLEALKVADSKTLLESERER 78

Query: 66  LFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEV 125
           LF  ++  + +GWA+DV+ P  +S+ ML +VK NLN +SHD+A GL+   L  GV +T+V
Sbjct: 79  LFAKMEDTDFVGWALDVLSPNLISTSMLGRVKYNLNSLSHDTATGLIQYALDQGVNVTQV 138

Query: 126 YVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEET 185
           +VDTVG PE Y+ +L + FP ++  V  KAD+LYPVVS ASI AKV RD+A+++W   E 
Sbjct: 139 FVDTVGMPETYQARLQQSFPGIEVTVKAKADALYPVVSAASICAKVARDQAVKKWQFVEK 198

Query: 186 AENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYF-KDVVEVSWESDK 245
            +++  ++GSGYP DP TK WL++H   VFGFP  VRFSW T  +   K+  +V WE   
Sbjct: 199 LQDLDTDYGSGYPNDPKTKAWLKEHVEPVFGFPQFVRFSWRTAQTILEKEAEDVIWE--- 258

Query: 246 VDEGGATSGSGKKQLRLRNVGITTSKRKSEEIESNGKGRCKFFQARKLEQLT 296
                    + + Q  LR +   TS   +E  ++  +   ++F  R LE  T
Sbjct: 259 -------DSASENQEGLRKI---TSYFLNEGSQARPRSSHRYFLERGLESAT 297

[Close]
BLAST of HG10001791 vs. ExPASy Swiss-Prot
Match: Q5U209 (Ribonuclease H2 subunit A OS=Rattus norvegicus OX=10116 GN=Rnaseh2a PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 5.2e-66
Identity = 120/244 (49.18%), Postives = 164/244 (67.21%), Query Frame = 0 

Query: 6   PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREE 65
           P+P    K PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSKTL E +RE 
Sbjct: 19  PVPAVCLKEPCVLGVDEAGRGPVLGPMVYAICYCPLSRLADLEALKVADSKTLTENERER 78

Query: 66  LFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTE 125
           LF  ++ + + +GWA+D++ P  +S+ ML +VK NLN +SHD+A GL+   +   V +T+
Sbjct: 79  LFAKMEEDGDFVGWALDILSPNLISTSMLGRVKYNLNSMSHDTAAGLIQHAMDQNVKVTQ 138

Query: 126 VYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEE 185
           V+VDTVG PE Y+ +L ++FP ++  V  KADSL+PVVS ASI+AKV RD+A++ W   E
Sbjct: 139 VFVDTVGMPETYQARLQQRFPGIEVTVKAKADSLFPVVSAASIIAKVARDQAVKNWQFVE 198

Query: 186 TAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYF-KDVVEVSWESD 245
           + + +  ++GSGYP DP TK WL  H   VFGFP  VRFSW T  +   K+   V+WE  
Sbjct: 199 SLQGLDSDYGSGYPNDPKTKAWLRKHVDPVFGFPQFVRFSWSTAQAILEKEAESVTWEDS 258

Query: 246 KVDE 247
             +E
Sbjct: 259 AAEE 262

[Close]
BLAST of HG10001791 vs. ExPASy Swiss-Prot
Match: Q2TBT5 (Ribonuclease H2 subunit A OS=Bos taurus OX=9913 GN=RNASEH2A PE=1 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.8e-66
Identity = 128/257 (49.81%), Postives = 168/257 (65.37%), Query Frame = 0 

Query: 1   MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEE 60
           +SS  P P    +PCV+G+DEAGRGPVLGPMVY   YC  S L++L +L  ADSKTL E 
Sbjct: 16  LSSPVP-PVCLKEPCVLGVDEAGRGPVLGPMVYAICYCPLSRLEDLEALKVADSKTLSES 75

Query: 61  KREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGV 120
           +R+ LF  ++ + + +GWA+DV+ P  +S+ ML +VK NLN +SHD+A GLV   L  GV
Sbjct: 76  ERDRLFAKMEEDGDFVGWALDVLSPNLISTSMLGRVKYNLNALSHDTATGLVQFALDQGV 135

Query: 121 LLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREW 180
            + +V+VDTVG PE Y+ +L ++FP ++  V  KAD+LYPVVS ASI AKV RD+A++ W
Sbjct: 136 NVAQVFVDTVGLPETYQERLQQRFPGIEVTVKAKADALYPVVSAASICAKVARDQAVKNW 195

Query: 181 ALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVE-VS 240
              E  +++  ++GSGYP DP TK WL  H   VFGFP  VRFSW T  S  +   E V 
Sbjct: 196 KFVEKLQDLDTDYGSGYPNDPKTKAWLRKHVDPVFGFPQFVRFSWRTAQSILESEAEDVK 255

Query: 241 WESDKVDEGGATSGSGK 256
           WE     E G   G GK
Sbjct: 256 WED---SETGDPKGPGK 268

[Close]
BLAST of HG10001791 vs. ExPASy Swiss-Prot
Match: Q9CWY8 (Ribonuclease H2 subunit A OS=Mus musculus OX=10090 GN=Rnaseh2a PE=1 SV=2)

HSP 1 Score: 251.5 bits (641), Expect = 1.2e-65
Identity = 122/244 (50.00%), Postives = 163/244 (66.80%), Query Frame = 0 

Query: 6   PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREE 65
           P+P    K PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSKTL E +RE 
Sbjct: 19  PVPAVCLKEPCVLGVDEAGRGPVLGPMVYAICYCPLSRLADLEALKVADSKTLTENERER 78

Query: 66  LFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTE 125
           LF  ++ + + +GWA+DV+ P  +S+ ML +VK NLN +SHD+A GL+   L   V +T+
Sbjct: 79  LFAKMEEDGDFVGWALDVLSPNLISTSMLGRVKYNLNSLSHDTAAGLIQYALDQNVNVTQ 138

Query: 126 VYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEE 185
           V+VDTVG PE Y+ +L + FP ++  V  KADSL+PVVS ASI AKV RD+A++ W   E
Sbjct: 139 VFVDTVGMPETYQARLQQHFPGIEVTVKAKADSLFPVVSAASIFAKVARDKAVKNWQFVE 198

Query: 186 TAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYF-KDVVEVSWESD 245
             +++  ++GSGYP DP TK WL  H   VFGFP  VRFSW T  +   K+  +V WE  
Sbjct: 199 NLQDLDSDYGSGYPNDPKTKAWLRKHVDPVFGFPQFVRFSWSTAQAILEKEAEDVIWEDS 258

Query: 246 KVDE 247
           + +E
Sbjct: 259 EAEE 262

[Close]
BLAST of HG10001791 vs. ExPASy TrEMBL
Match: A0A6J1IPY0 (Ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111479443 PE=3 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 7.6e-161
Identity = 283/297 (95.29%), Postives = 288/297 (96.97%), Query Frame = 0 

Query: 1   MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEE 60
           MSSQ PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEE
Sbjct: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL
Sbjct: 61  KREELFEGLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPNVKFVV+KKADSLYPVVSGASIVAKVTRDR LR+WA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVSKKADSLYPVVSGASIVAKVTRDRVLRDWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFP+LVRFSWGTC+SYFKD+VEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPSLVRFSWGTCTSYFKDIVEVSWE 240

Query: 241 SDKVDEGGATSGSGKKQLRLRNVGITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF 298
           SDKVDE GAT GSGKKQLRL NVGITTSKRKSEEIESN KGRCKFFQARKLEQLTHF
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF 297

[Close]
BLAST of HG10001791 vs. ExPASy TrEMBL
Match: A0A6J1GTR5 (Ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111457459 PE=3 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 1.3e-160
Identity = 283/297 (95.29%), Postives = 286/297 (96.30%), Query Frame = 0 

Query: 1   MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEE 60
           MSSQ PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSK LKEE
Sbjct: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL
Sbjct: 61  KREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDR LR+WA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTC+SYFKD+VEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWE 240

Query: 241 SDKVDEGGATSGSGKKQLRLRNVGITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF 298
           SDKVDE GAT GSGKKQLRL NVGITTSKRKSEEIESN KGRCKFFQARKLEQLTHF
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF 297

[Close]
BLAST of HG10001791 vs. ExPASy TrEMBL
Match: A0A0A0KTZ4 (Ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_4G015800 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 2.9e-160
Identity = 283/297 (95.29%), Postives = 289/297 (97.31%), Query Frame = 0 

Query: 1   MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEE 60
           MSSQ  LPKW SKPCVMGIDEAGRGPVLGPMVYGCLYCA+SYLK+LSSLNFADSKTLKEE
Sbjct: 1   MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKQLSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVL MGVL
Sbjct: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLSMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDRALREWA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTC+SYFKDVVEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE 240

Query: 241 SDKVDEGGATSGSGKKQLRLRNVGITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF 298
           SDKVDE GAT GSGKKQLRL NVGITTSKRKSEEIES+GKGRCKFFQARKLEQL+ F
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF 297

[Close]
BLAST of HG10001791 vs. ExPASy TrEMBL
Match: A0A5A7TT92 (Ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001310 PE=3 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 1.9e-159
Identity = 283/297 (95.29%), Postives = 287/297 (96.63%), Query Frame = 0 

Query: 1   MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEE 60
           MS Q  LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCA+SYLKELSSLNFADSKTLKEE
Sbjct: 1   MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISH SAMGLVTKVL MGVL
Sbjct: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDRALREWA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTC+SYFKDVVEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE 240

Query: 241 SDKVDEGGATSGSGKKQLRLRNVGITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF 298
           SDKVDE GAT GSGKKQLRL NVGITTSKRKSEEIESN KGRCKFFQARKLEQL+ F
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 297

[Close]
BLAST of HG10001791 vs. ExPASy TrEMBL
Match: A0A1S3BXP1 (Ribonuclease OS=Cucumis melo OX=3656 GN=LOC103494542 PE=3 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 1.9e-159
Identity = 283/297 (95.29%), Postives = 287/297 (96.63%), Query Frame = 0 

Query: 1   MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEE 60
           MS Q  LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCA+SYLKELSSLNFADSKTLKEE
Sbjct: 1   MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISH SAMGLVTKVL MGVL
Sbjct: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDRALREWA
Sbjct: 121 LTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVSWE 240
           LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTC+SYFKDVVEVSWE
Sbjct: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWE 240

Query: 241 SDKVDEGGATSGSGKKQLRLRNVGITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF 298
           SDKVDE GAT GSGKKQLRL NVGITTSKRKSEEIESN KGRCKFFQARKLEQL+ F
Sbjct: 241 SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLSRF 297

[Close]
BLAST of HG10001791 vs. TAIR 10
Match: AT2G25100.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 444.9 bits (1143), Expect = 5.1e-125
Identity = 211/297 (71.04%), Postives = 256/297 (86.20%), Query Frame = 0 

Query: 1   MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEE 60
           M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEE
Sbjct: 1   MESECLTPEWASQPCLMGIDEAGRGPVLGPMVYGCMYCPISYQSSLASLHFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREEL+E LK ++S+GWAVDVIDPRELS+KML K K NLNEISH+SAMGL+ +VL MGVL
Sbjct: 61  KREELYESLKLDKSLGWAVDVIDPRELSAKMLAKNKTNLNEISHNSAMGLIKRVLDMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTE Y+DTVGDP+KYRIKLSE+FP++KFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW 
Sbjct: 121 LTEAYLDTVGDPDKYRIKLSERFPSIKFVVSKKADSLFPIVSGASIVAKVTRDRALKEWL 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVSWE 240
           +EET E+++RNFGSGYPGDP TK WL  HKHSVFGFP+LVRFSWGTC+++ K  VEV+WE
Sbjct: 181 VEETGEDINRNFGSGYPGDPETKAWLVQHKHSVFGFPSLVRFSWGTCTTHLKGEVEVAWE 240

Query: 241 SDKVDEGGATSGSGKKQLRLRNVGITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF 298
           +D+ +E G    S K+Q +L + G  T +++SEEIES+GKGRCKF QARK++QLT F
Sbjct: 241 ADENEESG-NGSSSKRQAKLSSFGFKTCEKRSEEIESSGKGRCKFLQARKIQQLTQF 296

[Close]
BLAST of HG10001791 vs. TAIR 10
Match: AT2G25100.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 409.1 bits (1050), Expect = 3.1e-114
Identity = 198/297 (66.67%), Postives = 240/297 (80.81%), Query Frame = 0 

Query: 1   MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEE 60
           M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEE
Sbjct: 1   MESECLTPEWASQPCLMGIDEAGRGPVLGPMVYGCMYCPISYQSSLASLHFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREEL+E LK ++S+GWAVDVIDPRELS+KML                    KVL MGVL
Sbjct: 61  KREELYESLKLDKSLGWAVDVIDPRELSAKML-------------------AKVLDMGVL 120

Query: 121 LTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWA 180
           LTE Y+DTVGDP+KYRIKLSE+FP++KFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW 
Sbjct: 121 LTEAYLDTVGDPDKYRIKLSERFPSIKFVVSKKADSLFPIVSGASIVAKVTRDRALKEWL 180

Query: 181 LEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVSWE 240
           +EET E+++RNFGSGYPGDP TK WL  HKHSVFGFP+LVRFSWGTC+++ K  VEV+WE
Sbjct: 181 VEETGEDINRNFGSGYPGDPETKAWLVQHKHSVFGFPSLVRFSWGTCTTHLKGEVEVAWE 240

Query: 241 SDKVDEGGATSGSGKKQLRLRNVGITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF 298
           +D+ +E G    S K+Q +L + G  T +++SEEIES+GKGRCKF QARK++QLT F
Sbjct: 241 ADENEESG-NGSSSKRQAKLSSFGFKTCEKRSEEIESSGKGRCKFLQARKIQQLTQF 277

The following BLAST results are available for this feature:
BLAST of HG10001791 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038902264.15.8e-16396.30ribonuclease H2 subunit A [Benincasa hispida][more]
XP_023527419.12.4e-16195.96ribonuclease H2 subunit A [Cucurbita pepo subsp. pepo][more]
XP_022979887.11.6e-16095.29ribonuclease H2 subunit A [Cucurbita maxima][more]
XP_022955431.12.7e-16095.29ribonuclease H2 subunit A [Cucurbita moschata][more]
KAG6582048.16.0e-16095.29Ribonuclease H2 subunit A, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of HG10001791 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SEZ67.2e-12471.04Ribonuclease H2 subunit A OS=Arabidopsis thaliana OX=3702 GN=At2g25100 PE=2 SV=2[more]
O757921.4e-6645.21Ribonuclease H2 subunit A OS=Homo sapiens OX=9606 GN=RNASEH2A PE=1 SV=2[more]
Q5U2095.2e-6649.18Ribonuclease H2 subunit A OS=Rattus norvegicus OX=10116 GN=Rnaseh2a PE=2 SV=1[more]
Q2TBT56.8e-6649.81Ribonuclease H2 subunit A OS=Bos taurus OX=9913 GN=RNASEH2A PE=1 SV=1[more]
Q9CWY81.2e-6550.00Ribonuclease H2 subunit A OS=Mus musculus OX=10090 GN=Rnaseh2a PE=1 SV=2[more]
BLAST of HG10001791 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IPY07.6e-16195.29Ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111479443 PE=3 SV=1[more]
A0A6J1GTR51.3e-16095.29Ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111457459 PE=3 SV=1[more]
A0A0A0KTZ42.9e-16095.29Ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_4G015800 PE=3 SV=1[more]
A0A5A7TT921.9e-15995.29Ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001310 ... [more]
A0A1S3BXP11.9e-15995.29Ribonuclease OS=Cucumis melo OX=3656 GN=LOC103494542 PE=3 SV=1[more]
BLAST of HG10001791 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G25100.15.1e-12571.04Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT2G25100.23.1e-11466.67Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023160Ribonuclease HII, helix-loop-helix cap domain superfamilyGENE3D1.10.10.460Ribonuclease hii. Domain 2coord: 187..234
e-value: 7.4E-20
score: 72.3
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..186
e-value: 1.5E-67
score: 229.1
IPR024567Ribonuclease HII/HIII domainPFAMPF01351RNase_HIIcoord: 17..227
e-value: 4.3E-52
score: 176.8
IPR004649Ribonuclease H2, subunit ATIGRFAMTIGR00729TIGR00729coord: 16..229
e-value: 7.1E-55
score: 184.2
IPR001352Ribonuclease HII/HIIIPANTHERPTHR10954RIBONUCLEASE H2 SUBUNIT Acoord: 7..296
NoneNo IPR availablePANTHERPTHR10954:SF19RIBONUCLEASEcoord: 7..296
NoneNo IPR availableCDDcd07181RNase_HII_eukaryota_likecoord: 17..233
e-value: 5.92745E-141
score: 394.193
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 15..232

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10001791.1HG10001791.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043137 DNA replication, removal of RNA primer
biological_process GO:0006298 mismatch repair
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0016070 RNA metabolic process
cellular_component GO:0032299 ribonuclease H2 complex
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
molecular_function GO:0003676 nucleic acid binding