HG10001571 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTGCCAAGACAAGGTGGTCATGGATGGTGGGGATTTGATTCGTGTCCTCAAGTCTCTTGAAAAAGCTTATGACCTCGTAATGGTTGGAAGGCGACATGCCGAATCATGGTTGATGTCTGATGTTAGGAAATGGAACAAACGGCAGGGCGATTTGGGGACTGTGGGAGACTTTCTTGCTTCATTCGATCATGAGAGTGGGACATCTATACTTGTGGTGCAGCAGCAGACAAGATTGGGGGACTGCGAGACCCCGAAGAGTCGACGCATCTGA ATGTCTTGCCAAGACAAGGTGGTCATGGATGGTGGGGATTTGATTCGTGTCCTCAAGTCTCTTGAAAAAGCTTATGACCTCGTAATGGTTGGAAGGCGACATGCCGAATCATGGTTGATGTCTGATGTTAGGAAATGGAACAAACGGCAGGGCGATTTGGGGACTGTGGGAGACTTTCTTGCTTCATTCGATCATGAGAGTGGGACATCTATACTTGTGGTGCAGCAGCAGACAAGATTGGGGGACTGCGAGACCCCGAAGAGTCGACGCATCTGA ATGTCTTGCCAAGACAAGGTGGTCATGGATGGTGGGGATTTGATTCGTGTCCTCAAGTCTCTTGAAAAAGCTTATGACCTCGTAATGGTTGGAAGGCGACATGCCGAATCATGGTTGATGTCTGATGTTAGGAAATGGAACAAACGGCAGGGCGATTTGGGGACTGTGGGAGACTTTCTTGCTTCATTCGATCATGAGAGTGGGACATCTATACTTGTGGTGCAGCAGCAGACAAGATTGGGGGACTGCGAGACCCCGAAGAGTCGACGCATCTGA MSCQDKVVMDGGDLIRVLKSLEKAYDLVMVGRRHAESWLMSDVRKWNKRQGDLGTVGDFLASFDHESGTSILVVQQQTRLGDCETPKSRRI Homology
BLAST of HG10001571 vs. NCBI nr
Match: XP_038900896.1 (cation/H(+) antiporter 15-like isoform X2 [Benincasa hispida]) HSP 1 Score: 146.7 bits (369), Expect = 9.5e-32 Identity = 73/87 (83.91%), Postives = 76/87 (87.36%), Query Frame = 0
BLAST of HG10001571 vs. NCBI nr
Match: XP_038900895.1 (cation/H(+) antiporter 15-like isoform X1 [Benincasa hispida]) HSP 1 Score: 146.7 bits (369), Expect = 9.5e-32 Identity = 73/87 (83.91%), Postives = 76/87 (87.36%), Query Frame = 0
BLAST of HG10001571 vs. NCBI nr
Match: KAA0059947.1 (cation/H(+) antiporter 15-like isoform X1 [Cucumis melo var. makuwa] >TYK07591.1 cation/H(+) antiporter 15-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 145.2 bits (365), Expect = 2.7e-31 Identity = 69/87 (79.31%), Postives = 78/87 (89.66%), Query Frame = 0
BLAST of HG10001571 vs. NCBI nr
Match: XP_016903106.1 (PREDICTED: cation/H(+) antiporter 15-like isoform X1 [Cucumis melo]) HSP 1 Score: 145.2 bits (365), Expect = 2.7e-31 Identity = 69/87 (79.31%), Postives = 78/87 (89.66%), Query Frame = 0
BLAST of HG10001571 vs. NCBI nr
Match: XP_016903107.1 (PREDICTED: cation/H(+) antiporter 15-like isoform X2 [Cucumis melo]) HSP 1 Score: 145.2 bits (365), Expect = 2.7e-31 Identity = 69/87 (79.31%), Postives = 78/87 (89.66%), Query Frame = 0
BLAST of HG10001571 vs. ExPASy Swiss-Prot
Match: Q58P71 (Cation/H(+) antiporter 8 OS=Arabidopsis thaliana OX=3702 GN=CHX8 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 2.9e-07 Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 0
BLAST of HG10001571 vs. ExPASy Swiss-Prot
Match: Q8GX92 (Cation/H(+) antiporter 6A OS=Arabidopsis thaliana OX=3702 GN=CHX6a PE=2 SV=2) HSP 1 Score: 52.8 bits (125), Expect = 2.4e-06 Identity = 28/74 (37.84%), Postives = 44/74 (59.46%), Query Frame = 0
BLAST of HG10001571 vs. ExPASy Swiss-Prot
Match: Q9M008 (Cation/H(+) antiporter 26 OS=Arabidopsis thaliana OX=3702 GN=CHX26 PE=2 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 5.4e-06 Identity = 26/71 (36.62%), Postives = 44/71 (61.97%), Query Frame = 0
BLAST of HG10001571 vs. ExPASy Swiss-Prot
Match: Q8L709 (Cation/H(+) antiporter 28 OS=Arabidopsis thaliana OX=3702 GN=CHX28 PE=2 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 5.4e-06 Identity = 30/86 (34.88%), Postives = 47/86 (54.65%), Query Frame = 0
BLAST of HG10001571 vs. ExPASy Swiss-Prot
Match: Q9FYC0 (Cation/H(+) antiporter 12 OS=Arabidopsis thaliana OX=3702 GN=CHX12 PE=2 SV=2) HSP 1 Score: 50.1 bits (118), Expect = 1.6e-05 Identity = 28/74 (37.84%), Postives = 46/74 (62.16%), Query Frame = 0
BLAST of HG10001571 vs. ExPASy TrEMBL
Match: A0A5A7UZ64 (Cation/H(+) antiporter 15-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold852G00310 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.3e-31 Identity = 69/87 (79.31%), Postives = 78/87 (89.66%), Query Frame = 0
BLAST of HG10001571 vs. ExPASy TrEMBL
Match: A0A1S4E4E5 (cation/H(+) antiporter 15-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501964 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.3e-31 Identity = 69/87 (79.31%), Postives = 78/87 (89.66%), Query Frame = 0
BLAST of HG10001571 vs. ExPASy TrEMBL
Match: A0A1S4E4G1 (cation/H(+) antiporter 15-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501964 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.3e-31 Identity = 69/87 (79.31%), Postives = 78/87 (89.66%), Query Frame = 0
BLAST of HG10001571 vs. ExPASy TrEMBL
Match: A0A6J1D8K9 (cation/H(+) antiporter 15-like OS=Momordica charantia OX=3673 GN=LOC111018031 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 3.3e-30 Identity = 69/87 (79.31%), Postives = 73/87 (83.91%), Query Frame = 0
BLAST of HG10001571 vs. ExPASy TrEMBL
Match: A0A2N9E5W7 (Na_H_Exchanger domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2209 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.4e-17 Identity = 47/87 (54.02%), Postives = 65/87 (74.71%), Query Frame = 0
BLAST of HG10001571 vs. TAIR 10
Match: AT2G28180.1 (Cation/hydrogen exchanger family protein ) HSP 1 Score: 55.8 bits (133), Expect = 2.0e-08 Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 0
BLAST of HG10001571 vs. TAIR 10
Match: AT1G08140.1 (cation/H+ exchanger 6A ) HSP 1 Score: 52.8 bits (125), Expect = 1.7e-07 Identity = 28/74 (37.84%), Postives = 44/74 (59.46%), Query Frame = 0
BLAST of HG10001571 vs. TAIR 10
Match: AT3G52080.1 (cation/hydrogen exchanger 28 ) HSP 1 Score: 51.6 bits (122), Expect = 3.9e-07 Identity = 30/86 (34.88%), Postives = 47/86 (54.65%), Query Frame = 0
BLAST of HG10001571 vs. TAIR 10
Match: AT5G01680.1 (cation/H+ exchanger 26 ) HSP 1 Score: 51.6 bits (122), Expect = 3.9e-07 Identity = 26/71 (36.62%), Postives = 44/71 (61.97%), Query Frame = 0
BLAST of HG10001571 vs. TAIR 10
Match: AT1G16380.1 (Cation/hydrogen exchanger family protein ) HSP 1 Score: 50.1 bits (118), Expect = 1.1e-06 Identity = 25/72 (34.72%), Postives = 43/72 (59.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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