HG10001559 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10001559
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLOB domain-containing protein
LocationChr09: 18144242 .. 18144910 (-)
RNA-Seq ExpressionHG10001559
SyntenyHG10001559
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGCCGGTTCATCGCCCTGCGCCTCTTGCAGATTGCTACGGCGGCGCTGCGCAAAAGATTGCATTTTTGCCCCTTATTTCCCTCCCGATGACCCTCTCAAATTCGCCATGGTTCATAAGATCTTCGGCGCCAGCAATGTCAGCAAAATGTTGCAGGTCTCTTCTTCTTCGATCTCCTTCTTTTTTCTTTTAGTTCAACGAATGTCCGATAAGTCGGATTTTAAATTCAAACATCTGACGTTTTAGCTTCTAGACGTACAATGTCTCATTCGTGTATTTCAAATTAGTCATTTCTGTTAGATAAATTTTGAAATTGAATGTGATTAATTTTTTTATTAGGAGGTTGCGGTAGAACAGAGAGCGGATGCAGTGAACAGTATGGTATATGAAGCGAGTGCGAGAATGCGAGATCCAGTGTACGGTTGTGTAGGAACAATTTCGTTTCTACAAAACGAAGTGTCTCGATTGGAAATGCAACTCGGGGCAGCGCAAGCGGAGATTTTGACTTTACAAATGCAGCAACAGGTGGCTCCGACGACATTTCCGATGATGACCATGACGACCCAAATGGATCAAGATGATCAAAATCGTGAGATCTTCTCAAATGCTGATTCTTCTAATTTCTTTTTCCAGGAAGAGGAGGATTATTTCCCTCTATGGACTTGA

mRNA sequence

ATGGGAGCCGGTTCATCGCCCTGCGCCTCTTGCAGATTGCTACGGCGGCGCTGCGCAAAAGATTGCATTTTTGCCCCTTATTTCCCTCCCGATGACCCTCTCAAATTCGCCATGGTTCATAAGATCTTCGGCGCCAGCAATGTCAGCAAAATGTTGCAGGAGGTTGCGGTAGAACAGAGAGCGGATGCAGTGAACAGTATGGTATATGAAGCGAGTGCGAGAATGCGAGATCCAGTGTACGGTTGTGTAGGAACAATTTCGTTTCTACAAAACGAAGTGTCTCGATTGGAAATGCAACTCGGGGCAGCGCAAGCGGAGATTTTGACTTTACAAATGCAGCAACAGGTGGCTCCGACGACATTTCCGATGATGACCATGACGACCCAAATGGATCAAGATGATCAAAATCGTGAGATCTTCTCAAATGCTGATTCTTCTAATTTCTTTTTCCAGGAAGAGGAGGATTATTTCCCTCTATGGACTTGA

Coding sequence (CDS)

ATGGGAGCCGGTTCATCGCCCTGCGCCTCTTGCAGATTGCTACGGCGGCGCTGCGCAAAAGATTGCATTTTTGCCCCTTATTTCCCTCCCGATGACCCTCTCAAATTCGCCATGGTTCATAAGATCTTCGGCGCCAGCAATGTCAGCAAAATGTTGCAGGAGGTTGCGGTAGAACAGAGAGCGGATGCAGTGAACAGTATGGTATATGAAGCGAGTGCGAGAATGCGAGATCCAGTGTACGGTTGTGTAGGAACAATTTCGTTTCTACAAAACGAAGTGTCTCGATTGGAAATGCAACTCGGGGCAGCGCAAGCGGAGATTTTGACTTTACAAATGCAGCAACAGGTGGCTCCGACGACATTTCCGATGATGACCATGACGACCCAAATGGATCAAGATGATCAAAATCGTGAGATCTTCTCAAATGCTGATTCTTCTAATTTCTTTTTCCAGGAAGAGGAGGATTATTTCCCTCTATGGACTTGA

Protein sequence

MGAGSSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQRADAVNSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQMQQQVAPTTFPMMTMTTQMDQDDQNREIFSNADSSNFFFQEEEDYFPLWT
Homology
BLAST of HG10001559 vs. NCBI nr
Match: XP_038902597.1 (LOB domain-containing protein 12 [Benincasa hispida])

HSP 1 Score: 268.1 bits (684), Expect = 5.0e-68
Identity = 141/163 (86.50%), Postives = 146/163 (89.57%), Query Frame = 0

Query: 1   MGAGSSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQR 60
           M  GSSPCASC+LLRRRCAKDCIFAPYFPPDDPLKFA+VHKIFGASNVSKMLQEV+VEQR
Sbjct: 1   MRIGSSPCASCKLLRRRCAKDCIFAPYFPPDDPLKFAIVHKIFGASNVSKMLQEVSVEQR 60

Query: 61  ADAVNSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQMQQQVAPTT 120
            DAVNSMVYEASARMRDPVYGCVGTISFLQNEVSRLE+QLGAAQAEILTLQMQQQ AP  
Sbjct: 61  TDAVNSMVYEASARMRDPVYGCVGTISFLQNEVSRLEIQLGAAQAEILTLQMQQQQAP-- 120

Query: 121 FPMMTMTTQMDQDDQNREIFSNADSSNFF--FQEEEDYFPLWT 162
              MT TTQMDQDDQN  IFSN DSSN F  FQE EDY+PLWT
Sbjct: 121 ---MTTTTQMDQDDQNLVIFSNVDSSNSFHTFQEMEDYYPLWT 158

BLAST of HG10001559 vs. NCBI nr
Match: XP_008463841.1 (PREDICTED: LOB domain-containing protein 12-like [Cucumis melo])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 132/163 (80.98%), Postives = 145/163 (88.96%), Query Frame = 0

Query: 1   MGAGSSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQR 60
           MG GSSPCASC+LLRRRCAKDCIFAPYFPP+DPLKFA+VHKIFGASNVSKMLQEV ++QR
Sbjct: 1   MGVGSSPCASCKLLRRRCAKDCIFAPYFPPEDPLKFAIVHKIFGASNVSKMLQEVPIDQR 60

Query: 61  ADAVNSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQMQQQVAPTT 120
           ADAV+SMVYEASARM+DPVYGCVGTI+FLQNEVSRLE+QLGAAQAEILTLQM+QQ   TT
Sbjct: 61  ADAVSSMVYEASARMQDPVYGCVGTIAFLQNEVSRLEIQLGAAQAEILTLQMRQQETSTT 120

Query: 121 FPMMTMTTQMDQDDQNREIFSNADSSN--FFFQEEEDYFPLWT 162
           FP  T TTQMDQD+QN  IFSN DSSN    FQ  EDY+ +WT
Sbjct: 121 FP--TTTTQMDQDEQNLMIFSNTDSSNSLHIFQATEDYYHMWT 161

BLAST of HG10001559 vs. NCBI nr
Match: XP_004143222.1 (LOB domain-containing protein 12 [Cucumis sativus] >KGN47050.1 hypothetical protein Csa_021050 [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 2.6e-61
Identity = 131/164 (79.88%), Postives = 143/164 (87.20%), Query Frame = 0

Query: 1   MGAGSSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQR 60
           MG GSSPCASC+LLRRRCAKDCIFAPYFPP DPLKFA+VHKIFGASNVSKMLQEV V+QR
Sbjct: 1   MGVGSSPCASCKLLRRRCAKDCIFAPYFPPHDPLKFAIVHKIFGASNVSKMLQEVPVDQR 60

Query: 61  ADAVNSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQM-QQQVAPT 120
           ADAV+SMVYEASARM+DPVYGCVG I FLQNEVS+LE+QLGAA+AEIL LQM QQQ A  
Sbjct: 61  ADAVSSMVYEASARMQDPVYGCVGKILFLQNEVSQLEIQLGAARAEILMLQMRQQQEASI 120

Query: 121 TFPMMTMTTQMDQDDQNREIFSNADSSNFF--FQEEEDYFPLWT 162
           TFPM   TTQMDQD+QN  I SNADSSN F  FQ  +D++PLWT
Sbjct: 121 TFPM--TTTQMDQDEQNLMILSNADSSNSFHVFQAADDHYPLWT 162

BLAST of HG10001559 vs. NCBI nr
Match: XP_023533075.1 (LOB domain-containing protein 12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.3 bits (604), Expect = 9.4e-59
Identity = 125/163 (76.69%), Postives = 136/163 (83.44%), Query Frame = 0

Query: 1   MGAGSSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQR 60
           MGAGSSPCASC+LLRRRCAKDCIFAPYFPPDDP KFA+VHKIFGASNVSKMLQE+ ++QR
Sbjct: 1   MGAGSSPCASCKLLRRRCAKDCIFAPYFPPDDPYKFAIVHKIFGASNVSKMLQELPLDQR 60

Query: 61  ADAVNSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQMQQQVAPTT 120
            DAVNSMVYEASARMRDPVYGCVG I+FLQN+VSRLEMQL AAQAEIL+ QMQQQ AP +
Sbjct: 61  PDAVNSMVYEASARMRDPVYGCVGAITFLQNQVSRLEMQLAAAQAEILSFQMQQQAAPAS 120

Query: 121 FPMMTMTTQMDQDDQNREIFSNADSSNFF--FQEEEDYFPLWT 162
           FPM    TQM+Q DQN    SNADS N      E EDY  LW+
Sbjct: 121 FPM----TQMNQYDQNLVFLSNADSFNSVDGSPEVEDYCSLWS 159

BLAST of HG10001559 vs. NCBI nr
Match: XP_022947802.1 (LOB domain-containing protein 12-like [Cucurbita moschata])

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58
Identity = 125/163 (76.69%), Postives = 136/163 (83.44%), Query Frame = 0

Query: 1   MGAGSSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQR 60
           MGAGSSPCASC+LLRRRCAKDCIFAPYFPPDDP KFA+VHKIFGASNVSKMLQE+ ++QR
Sbjct: 1   MGAGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKIFGASNVSKMLQELPLDQR 60

Query: 61  ADAVNSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQMQQQVAPTT 120
            DAVNSMVYEASARMRDPVYGCVG I+FLQN+VSRLEMQL AAQAEIL+ QMQQQ AP +
Sbjct: 61  PDAVNSMVYEASARMRDPVYGCVGAITFLQNQVSRLEMQLAAAQAEILSFQMQQQAAPAS 120

Query: 121 FPMMTMTTQMDQDDQNREIFSNADSSNFF--FQEEEDYFPLWT 162
           FPM    TQM+Q DQN    SNADS N      E EDY  LW+
Sbjct: 121 FPM----TQMNQYDQNLVFLSNADSFNSVDGSPEVEDYCSLWS 159

BLAST of HG10001559 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 191.4 bits (485), Expect = 7.8e-48
Identity = 98/150 (65.33%), Postives = 119/150 (79.33%), Query Frame = 0

Query: 2   GAGSSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQRA 61
           G GSSPCASC+LLRRRCAKDCIFAPYFPPDDP KFA+VHK+FGASNVSKMLQE+ V QRA
Sbjct: 3   GPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRA 62

Query: 62  DAVNSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQMQQQVAPTTF 121
           DAVNS+V+EA+AR+RDPVYGCVG IS+LQN+VS+L+MQL  AQAEIL +QMQ +    T 
Sbjct: 63  DAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNE---PTL 122

Query: 122 PMMTMTTQMDQDDQ----NREIFSNADSSN 148
                  ++DQD +    N    +N +++N
Sbjct: 123 QSHHQVLELDQDHKALLLNNNNINNCNTNN 149

BLAST of HG10001559 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.5e-38
Identity = 75/118 (63.56%), Postives = 98/118 (83.05%), Query Frame = 0

Query: 5   SSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQRADAV 64
           +SPCA+C+LLRRRCA+DC+F+PYFP D+P KFA VH++FGASNV+KMLQE+ + QR DAV
Sbjct: 11  ASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAV 70

Query: 65  NSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQMQQQVAPTTFP 123
           +SMVYEA+AR+RDPVYGCVG IS LQ ++  L+ QL  AQAE++ L+++Q    T FP
Sbjct: 71  SSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS---TNFP 125

BLAST of HG10001559 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.0e-35
Identity = 77/164 (46.95%), Postives = 106/164 (64.63%), Query Frame = 0

Query: 6   SPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQRADAVN 65
           SPCA+C++LRRRCA+ C+ APYFPP DP KF + H++FGASN+ K LQE+   QR DAVN
Sbjct: 32  SPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 91

Query: 66  SMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQMQQQVAPTTFPMMT 125
           SMVYEA AR+RDPVYGC G I  LQ +VS L+ QL  AQ E++ +Q Q+        ++ 
Sbjct: 92  SMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQRS------NLLE 151

Query: 126 MTTQMDQDDQNREIFSNADSSNFFFQEEED--------YFPLWT 162
           +   MDQ  +  +   + +S++  F E++         + PLWT
Sbjct: 152 LIYNMDQQQKQEQDNMSFESNDLGFLEDKSNTNSSMLWWDPLWT 189

BLAST of HG10001559 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 148.3 bits (373), Expect = 7.5e-35
Identity = 66/104 (63.46%), Postives = 84/104 (80.77%), Query Frame = 0

Query: 5   SSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQRADAV 64
           +SPCA+C+ LRR+C  DC+FAPYFPP++P KFA VH+IFGASNVSK+L EVA  QR DAV
Sbjct: 37  NSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAV 96

Query: 65  NSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEIL 109
           NS+ YEA AR++DPVYGCVG IS LQ +V RL+ +L    A+++
Sbjct: 97  NSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLM 140

BLAST of HG10001559 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 9.8e-35
Identity = 69/122 (56.56%), Postives = 89/122 (72.95%), Query Frame = 0

Query: 1   MGAGSSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQR 60
           M + SSPCA+C+ LRR+C ++C+FAPYFPPD P KFA VHK+FGASNV+K+L E+A  QR
Sbjct: 1   MASSSSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQR 60

Query: 61  ADAVNSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQMQQQVAPTT 120
            DAVNS+ YEA AR+RDPVYGCVG IS LQ+ + ++   L  A+ E+ T    Q + P  
Sbjct: 61  EDAVNSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYVGPQAMLPIL 120

Query: 121 FP 123
            P
Sbjct: 121 QP 122

BLAST of HG10001559 vs. ExPASy TrEMBL
Match: A0A1S3CKM4 (LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103501884 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.6e-65
Identity = 132/163 (80.98%), Postives = 145/163 (88.96%), Query Frame = 0

Query: 1   MGAGSSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQR 60
           MG GSSPCASC+LLRRRCAKDCIFAPYFPP+DPLKFA+VHKIFGASNVSKMLQEV ++QR
Sbjct: 1   MGVGSSPCASCKLLRRRCAKDCIFAPYFPPEDPLKFAIVHKIFGASNVSKMLQEVPIDQR 60

Query: 61  ADAVNSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQMQQQVAPTT 120
           ADAV+SMVYEASARM+DPVYGCVGTI+FLQNEVSRLE+QLGAAQAEILTLQM+QQ   TT
Sbjct: 61  ADAVSSMVYEASARMQDPVYGCVGTIAFLQNEVSRLEIQLGAAQAEILTLQMRQQETSTT 120

Query: 121 FPMMTMTTQMDQDDQNREIFSNADSSN--FFFQEEEDYFPLWT 162
           FP  T TTQMDQD+QN  IFSN DSSN    FQ  EDY+ +WT
Sbjct: 121 FP--TTTTQMDQDEQNLMIFSNTDSSNSLHIFQATEDYYHMWT 161

BLAST of HG10001559 vs. ExPASy TrEMBL
Match: A0A0A0KBK5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G181550 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.3e-61
Identity = 131/164 (79.88%), Postives = 143/164 (87.20%), Query Frame = 0

Query: 1   MGAGSSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQR 60
           MG GSSPCASC+LLRRRCAKDCIFAPYFPP DPLKFA+VHKIFGASNVSKMLQEV V+QR
Sbjct: 1   MGVGSSPCASCKLLRRRCAKDCIFAPYFPPHDPLKFAIVHKIFGASNVSKMLQEVPVDQR 60

Query: 61  ADAVNSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQM-QQQVAPT 120
           ADAV+SMVYEASARM+DPVYGCVG I FLQNEVS+LE+QLGAA+AEIL LQM QQQ A  
Sbjct: 61  ADAVSSMVYEASARMQDPVYGCVGKILFLQNEVSQLEIQLGAARAEILMLQMRQQQEASI 120

Query: 121 TFPMMTMTTQMDQDDQNREIFSNADSSNFF--FQEEEDYFPLWT 162
           TFPM   TTQMDQD+QN  I SNADSSN F  FQ  +D++PLWT
Sbjct: 121 TFPM--TTTQMDQDEQNLMILSNADSSNSFHVFQAADDHYPLWT 162

BLAST of HG10001559 vs. ExPASy TrEMBL
Match: A0A6J1G7F7 (LOB domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111451558 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.8e-59
Identity = 125/163 (76.69%), Postives = 136/163 (83.44%), Query Frame = 0

Query: 1   MGAGSSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQR 60
           MGAGSSPCASC+LLRRRCAKDCIFAPYFPPDDP KFA+VHKIFGASNVSKMLQE+ ++QR
Sbjct: 1   MGAGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKIFGASNVSKMLQELPLDQR 60

Query: 61  ADAVNSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQMQQQVAPTT 120
            DAVNSMVYEASARMRDPVYGCVG I+FLQN+VSRLEMQL AAQAEIL+ QMQQQ AP +
Sbjct: 61  PDAVNSMVYEASARMRDPVYGCVGAITFLQNQVSRLEMQLAAAQAEILSFQMQQQAAPAS 120

Query: 121 FPMMTMTTQMDQDDQNREIFSNADSSNFF--FQEEEDYFPLWT 162
           FPM    TQM+Q DQN    SNADS N      E EDY  LW+
Sbjct: 121 FPM----TQMNQYDQNLVFLSNADSFNSVDGSPEVEDYCSLWS 159

BLAST of HG10001559 vs. ExPASy TrEMBL
Match: A0A6J1L5Y7 (LOB domain-containing protein 12-like OS=Cucurbita maxima OX=3661 GN=LOC111499469 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.9e-58
Identity = 124/163 (76.07%), Postives = 135/163 (82.82%), Query Frame = 0

Query: 1   MGAGSSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQR 60
           MGAGSSPCASC+LLRRRCAKDCIFAPYFPPDDP KFA+VHKIFGASNVSKMLQE+ ++QR
Sbjct: 1   MGAGSSPCASCKLLRRRCAKDCIFAPYFPPDDPYKFAIVHKIFGASNVSKMLQELPLDQR 60

Query: 61  ADAVNSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQMQQQVAPTT 120
            DAVNSMVYEASARMRDPVYGCVG I+FLQN+VSRLEMQL AAQAEIL+ QMQQQ A  +
Sbjct: 61  PDAVNSMVYEASARMRDPVYGCVGAITFLQNQVSRLEMQLAAAQAEILSFQMQQQAASAS 120

Query: 121 FPMMTMTTQMDQDDQNREIFSNADSSNFF--FQEEEDYFPLWT 162
           FPM    TQM+Q DQN    SNADS N      E EDY  LW+
Sbjct: 121 FPM----TQMNQYDQNLVFLSNADSFNSVDGSPEVEDYCSLWS 159

BLAST of HG10001559 vs. ExPASy TrEMBL
Match: A0A6J1FX16 (LOB domain-containing protein 12-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449031 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.9e-50
Identity = 105/132 (79.55%), Postives = 116/132 (87.88%), Query Frame = 0

Query: 1   MGAGSSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQR 60
           M A SSPCASC+LLRRRC KDCIFAPYFPP+DPLKFA+VHKIFGASNVSKMLQ+V+V+QR
Sbjct: 1   MEASSSPCASCKLLRRRCTKDCIFAPYFPPNDPLKFAIVHKIFGASNVSKMLQKVSVDQR 60

Query: 61  ADAVNSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQMQQQVAPTT 120
           AD V+S+VYEA+ARMRDPVYGCVG ISFLQNEVS+LEMQL    AEIL+ QMQQ VAP T
Sbjct: 61  ADTVSSIVYEANARMRDPVYGCVGIISFLQNEVSQLEMQLAEVHAEILSFQMQQPVAPMT 120

Query: 121 FPMMTMTTQMDQ 133
           FP    TTQMDQ
Sbjct: 121 FP----TTQMDQ 128

BLAST of HG10001559 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 191.4 bits (485), Expect = 5.5e-49
Identity = 98/150 (65.33%), Postives = 119/150 (79.33%), Query Frame = 0

Query: 2   GAGSSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQRA 61
           G GSSPCASC+LLRRRCAKDCIFAPYFPPDDP KFA+VHK+FGASNVSKMLQE+ V QRA
Sbjct: 3   GPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRA 62

Query: 62  DAVNSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQMQQQVAPTTF 121
           DAVNS+V+EA+AR+RDPVYGCVG IS+LQN+VS+L+MQL  AQAEIL +QMQ +    T 
Sbjct: 63  DAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNE---PTL 122

Query: 122 PMMTMTTQMDQDDQ----NREIFSNADSSN 148
                  ++DQD +    N    +N +++N
Sbjct: 123 QSHHQVLELDQDHKALLLNNNNINNCNTNN 149

BLAST of HG10001559 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 159.8 bits (403), Expect = 1.8e-39
Identity = 75/118 (63.56%), Postives = 98/118 (83.05%), Query Frame = 0

Query: 5   SSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQRADAV 64
           +SPCA+C+LLRRRCA+DC+F+PYFP D+P KFA VH++FGASNV+KMLQE+ + QR DAV
Sbjct: 11  ASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAV 70

Query: 65  NSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQMQQQVAPTTFP 123
           +SMVYEA+AR+RDPVYGCVG IS LQ ++  L+ QL  AQAE++ L+++Q    T FP
Sbjct: 71  SSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS---TNFP 125

BLAST of HG10001559 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 150.2 bits (378), Expect = 1.4e-36
Identity = 77/164 (46.95%), Postives = 106/164 (64.63%), Query Frame = 0

Query: 6   SPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQRADAVN 65
           SPCA+C++LRRRCA+ C+ APYFPP DP KF + H++FGASN+ K LQE+   QR DAVN
Sbjct: 32  SPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 91

Query: 66  SMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQMQQQVAPTTFPMMT 125
           SMVYEA AR+RDPVYGC G I  LQ +VS L+ QL  AQ E++ +Q Q+        ++ 
Sbjct: 92  SMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQRS------NLLE 151

Query: 126 MTTQMDQDDQNREIFSNADSSNFFFQEEED--------YFPLWT 162
           +   MDQ  +  +   + +S++  F E++         + PLWT
Sbjct: 152 LIYNMDQQQKQEQDNMSFESNDLGFLEDKSNTNSSMLWWDPLWT 189

BLAST of HG10001559 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 148.3 bits (373), Expect = 5.4e-36
Identity = 66/104 (63.46%), Postives = 84/104 (80.77%), Query Frame = 0

Query: 5   SSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQRADAV 64
           +SPCA+C+ LRR+C  DC+FAPYFPP++P KFA VH+IFGASNVSK+L EVA  QR DAV
Sbjct: 37  NSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAV 96

Query: 65  NSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEIL 109
           NS+ YEA AR++DPVYGCVG IS LQ +V RL+ +L    A+++
Sbjct: 97  NSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLM 140

BLAST of HG10001559 vs. TAIR 10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1 )

HSP 1 Score: 147.9 bits (372), Expect = 7.0e-36
Identity = 69/122 (56.56%), Postives = 89/122 (72.95%), Query Frame = 0

Query: 1   MGAGSSPCASCRLLRRRCAKDCIFAPYFPPDDPLKFAMVHKIFGASNVSKMLQEVAVEQR 60
           M + SSPCA+C+ LRR+C ++C+FAPYFPPD P KFA VHK+FGASNV+K+L E+A  QR
Sbjct: 1   MASSSSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQR 60

Query: 61  ADAVNSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAEILTLQMQQQVAPTT 120
            DAVNS+ YEA AR+RDPVYGCVG IS LQ+ + ++   L  A+ E+ T    Q + P  
Sbjct: 61  EDAVNSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYVGPQAMLPIL 120

Query: 121 FP 123
            P
Sbjct: 121 QP 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038902597.15.0e-6886.50LOB domain-containing protein 12 [Benincasa hispida][more]
XP_008463841.11.1e-6480.98PREDICTED: LOB domain-containing protein 12-like [Cucumis melo][more]
XP_004143222.12.6e-6179.88LOB domain-containing protein 12 [Cucumis sativus] >KGN47050.1 hypothetical prot... [more]
XP_023533075.19.4e-5976.69LOB domain-containing protein 12-like [Cucurbita pepo subsp. pepo][more]
XP_022947802.11.6e-5876.69LOB domain-containing protein 12-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q8LBW37.8e-4865.33LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S... [more]
Q9SHE92.5e-3863.56LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=... [more]
Q9LQR02.0e-3546.95LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=... [more]
Q8L8Q37.5e-3563.46LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S... [more]
Q9FKZ39.8e-3556.56LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 S... [more]
Match NameE-valueIdentityDescription
A0A1S3CKM45.6e-6580.98LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103501884 PE... [more]
A0A0A0KBK51.3e-6179.88LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G181550 PE=3 SV... [more]
A0A6J1G7F77.8e-5976.69LOB domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111451... [more]
A0A6J1L5Y73.9e-5876.07LOB domain-containing protein 12-like OS=Cucurbita maxima OX=3661 GN=LOC11149946... [more]
A0A6J1FX163.9e-5079.55LOB domain-containing protein 12-like isoform X1 OS=Cucurbita moschata OX=3662 G... [more]
Match NameE-valueIdentityDescription
AT2G30130.15.5e-4965.33Lateral organ boundaries (LOB) domain family protein [more]
AT1G31320.11.8e-3963.56LOB domain-containing protein 4 [more]
AT1G07900.11.4e-3646.95LOB domain-containing protein 1 [more]
AT3G27650.15.4e-3663.46LOB domain-containing protein 25 [more]
AT5G66870.17.0e-3656.56ASYMMETRIC LEAVES 2-like 1 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 86..113
NoneNo IPR availablePANTHERPTHR31301LOB DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 1..150
NoneNo IPR availablePANTHERPTHR31301:SF97LOB DOMAIN-CONTAINING PROTEIN 12-LIKEcoord: 1..150
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 7..104
e-value: 1.0E-39
score: 135.1
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 6..107
score: 25.869295

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10001559.1HG10001559.1mRNA